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Conserved domains on  [gi|1789113460|gb|QHB12463|]
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Atp6 (mitochondrion) [Saccharomyces cerevisiae]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 30-256 5.03e-51

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


:

Pssm-ID: 273458  Cd Length: 226  Bit Score: 166.23  E-value: 5.03e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  30 DLSCLNLTTFSLYTIIVLLVITSLYTLTNNNNKIIGSRWLISQEAIYDTIMNMTKGQIGGKNwGLYFPMIFTLFMFIFIA 109
Cdd:TIGR01131   6 DISPITLFSLTLLSLILLLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKK-GKFFPLIFTLFLFILIS 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 110 NLISMIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVPLLVIIETLSYFARAISLGLRLGS 189
Cdd:TIGR01131  85 NLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFA 164

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1789113460 190 NILAGHLLMVILAGLTFNFMLINLFTLVFGFvplamILAIMMLEFAIGIIQGYVWAILTASYLKDAV 256
Cdd:TIGR01131 165 NISAGHLLLTLLSGLLFSLMSSAIFALLLLI-----LVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
 
Name Accession Description Interval E-value
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 30-256 5.03e-51

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 166.23  E-value: 5.03e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  30 DLSCLNLTTFSLYTIIVLLVITSLYTLTNNNNKIIGSRWLISQEAIYDTIMNMTKGQIGGKNwGLYFPMIFTLFMFIFIA 109
Cdd:TIGR01131   6 DISPITLFSLTLLSLILLLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKK-GKFFPLIFTLFLFILIS 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 110 NLISMIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVPLLVIIETLSYFARAISLGLRLGS 189
Cdd:TIGR01131  85 NLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFA 164

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1789113460 190 NILAGHLLMVILAGLTFNFMLINLFTLVFGFvplamILAIMMLEFAIGIIQGYVWAILTASYLKDAV 256
Cdd:TIGR01131 165 NISAGHLLLTLLSGLLFSLMSSAIFALLLLI-----LVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_A pfam00119
ATP synthase A chain;
44-253 2.30e-46

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 154.18  E-value: 2.30e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  44 IIVLLVITSLYTLTNNNNKIIGSRWLISQEAIYDTIMNMTKGQIGGKNWGLYFPMIFTLFMFIFIANLISMI---PYSFA 120
Cdd:pfam00119   6 IVALILLLFLLLATRKTKKLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFT 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 121 LSAHLVFIISLSIVIWLGNTILGLYKHGWV--FFSLFVPAgTPLPLVPLLVIIETLSYFARAISLGLRLGSNILAGHLLM 198
Cdd:pfam00119  86 VTADINVTLALALIVFLLVHYYGIKKHGLGgyFKKLFVPP-VPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1789113460 199 VILAGLTFNFMLINLFtlvFGFVPLAMILAIMMLEFAIGIIQGYVWAILTASYLK 253
Cdd:pfam00119 165 LLLAGLIFALLSAGFL---LGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 14-259 1.12e-45

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 153.24  E-value: 1.12e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  14 DQFEIRTLFGLQSSFIDLsclnLTTFSLYTIIVLLVITsLYTLTNNNNKIIGSRWLISQEAIYDTIMNMTKGQIGGKNWG 93
Cdd:MTH00175    7 DQFNIIRLITIQAFLGDW----LVTFTNSSMMMVLAVI-IFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQK 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  94 lYFPMIFTLFMFIFIANLISMIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVPLLVIIET 173
Cdd:MTH00175   82 -YFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIET 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 174 LSYFARAISLGLRLGSNILAGHLLMVILAGLTFNfMLINLFtLVFGFVPLAMILAIMMLEFAIGIIQGYVWAILTASYLK 253
Cdd:MTH00175  161 LSYLIRAISLGVRLAANISAGHLLFAILSGFAFN-MLSNGL-IILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLG 238


                  ....*.
gi 1789113460 254 DAVYLH 259
Cdd:MTH00175  239 DTIALH 244
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 95-253 3.21e-41

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 138.69  E-value: 3.21e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  95 YFPMIFTLFMFIFIANLISMIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVPLLVIIETL 174
Cdd:cd00310     4 YLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELI 83

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1789113460 175 SYFARAISLGLRLGSNILAGHLLMVILAGLTFNFMLInlftlvFGFVPLAMILAIMMLEFAIGIIQGYVWAILTASYLK 253
Cdd:cd00310    84 SELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSS------VGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 41-256 7.15e-35

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 124.03  E-value: 7.15e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  41 LYTIIVLLVITSLYTLTNNNNKIIGSRWLISQEAIYDTIMNMTKGQIGGKnWGLYFPMIFTLFMFIFIANLISMIPYSFA 120
Cdd:COG0356     4 LMSWLAMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKK-GRKFAPLLLTLFLFILVSNLLGLIPGLFP 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 121 LSAHLVFIISLSIVIWLGNTILGLYKHGWVFF--SLFVPAGtpLPLVPLLVIIETLSYFARAISLGLRLGSNILAGHLLM 198
Cdd:COG0356    83 PTADINVTLALALIVFVLVHYYGIKKKGLGGYlkHLFFPPF--PWLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIIL 160

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1789113460 199 VILAGLTFNFMlinlftlvFGFVPLAMILAIMMLEFAIGIIQGYVWAILTASYLKDAV 256
Cdd:COG0356   161 LLLAGLAPFLL--------LGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISLAV 210
 
Name Accession Description Interval E-value
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 30-256 5.03e-51

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 166.23  E-value: 5.03e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  30 DLSCLNLTTFSLYTIIVLLVITSLYTLTNNNNKIIGSRWLISQEAIYDTIMNMTKGQIGGKNwGLYFPMIFTLFMFIFIA 109
Cdd:TIGR01131   6 DISPITLFSLTLLSLILLLSLLIFLISSSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKK-GKFFPLIFTLFLFILIS 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 110 NLISMIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVPLLVIIETLSYFARAISLGLRLGS 189
Cdd:TIGR01131  85 NLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFA 164

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1789113460 190 NILAGHLLMVILAGLTFNFMLINLFTLVFGFvplamILAIMMLEFAIGIIQGYVWAILTASYLKDAV 256
Cdd:TIGR01131 165 NISAGHLLLTLLSGLLFSLMSSAIFALLLLI-----LVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_A pfam00119
ATP synthase A chain;
44-253 2.30e-46

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 154.18  E-value: 2.30e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  44 IIVLLVITSLYTLTNNNNKIIGSRWLISQEAIYDTIMNMTKGQIGGKNWGLYFPMIFTLFMFIFIANLISMI---PYSFA 120
Cdd:pfam00119   6 IVALILLLFLLLATRKTKKLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGFT 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 121 LSAHLVFIISLSIVIWLGNTILGLYKHGWV--FFSLFVPAgTPLPLVPLLVIIETLSYFARAISLGLRLGSNILAGHLLM 198
Cdd:pfam00119  86 VTADINVTLALALIVFLLVHYYGIKKHGLGgyFKKLFVPP-VPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1789113460 199 VILAGLTFNFMLINLFtlvFGFVPLAMILAIMMLEFAIGIIQGYVWAILTASYLK 253
Cdd:pfam00119 165 LLLAGLIFALLSAGFL---LGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 14-259 1.12e-45

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 153.24  E-value: 1.12e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  14 DQFEIRTLFGLQSSFIDLsclnLTTFSLYTIIVLLVITsLYTLTNNNNKIIGSRWLISQEAIYDTIMNMTKGQIGGKNWG 93
Cdd:MTH00175    7 DQFNIIRLITIQAFLGDW----LVTFTNSSMMMVLAVI-IFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQK 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  94 lYFPMIFTLFMFIFIANLISMIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVPLLVIIET 173
Cdd:MTH00175   82 -YFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIET 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 174 LSYFARAISLGLRLGSNILAGHLLMVILAGLTFNfMLINLFtLVFGFVPLAMILAIMMLEFAIGIIQGYVWAILTASYLK 253
Cdd:MTH00175  161 LSYLIRAISLGVRLAANISAGHLLFAILSGFAFN-MLSNGL-IILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLG 238


                  ....*.
gi 1789113460 254 DAVYLH 259
Cdd:MTH00175  239 DTIALH 244
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 14-259 2.54e-43

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 146.72  E-value: 2.54e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  14 DQFEIRTLFGLQSSfidlsclnlttfSLYTIIVLLVITSLYtltnNNNKIIGSRWLISQEAIYDTIMNMTKGQIGGKNWg 93
Cdd:MTH00172    7 DQFNIVWLIGLTNS------------SIMMILVIIVVLLLF----KGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGL- 69

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  94 LYFPMIFTLFMFIFIANLISMIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVPLLVIIET 173
Cdd:MTH00172   70 KYFPFIISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIET 149

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 174 LSYFARAISLGLRLGSNILAGHLLMVILAGLTFNFMlinLFTLVFGFVPLAMILAIMMLEFAIGIIQGYVWAILTASYLK 253
Cdd:MTH00172  150 VSYISRAISLGVRLAANLSAGHLLFAILAGFGFNML---CASGFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYLA 226


                  ....*.
gi 1789113460 254 DAVYLH 259
Cdd:MTH00172  227 DTIVLH 232
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 95-253 3.21e-41

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 138.69  E-value: 3.21e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  95 YFPMIFTLFMFIFIANLISMIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVPLLVIIETL 174
Cdd:cd00310     4 YLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELI 83

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1789113460 175 SYFARAISLGLRLGSNILAGHLLMVILAGLTFNFMLInlftlvFGFVPLAMILAIMMLEFAIGIIQGYVWAILTASYLK 253
Cdd:cd00310    84 SELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSS------VGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 41-256 7.15e-35

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 124.03  E-value: 7.15e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  41 LYTIIVLLVITSLYTLTNNNNKIIGSRWLISQEAIYDTIMNMTKGQIGGKnWGLYFPMIFTLFMFIFIANLISMIPYSFA 120
Cdd:COG0356     4 LMSWLAMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKK-GRKFAPLLLTLFLFILVSNLLGLIPGLFP 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 121 LSAHLVFIISLSIVIWLGNTILGLYKHGWVFF--SLFVPAGtpLPLVPLLVIIETLSYFARAISLGLRLGSNILAGHLLM 198
Cdd:COG0356    83 PTADINVTLALALIVFVLVHYYGIKKKGLGGYlkHLFFPPF--PWLAPLMLPIEIISELARPLSLSLRLFGNMFAGHIIL 160

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1789113460 199 VILAGLTFNFMlinlftlvFGFVPLAMILAIMMLEFAIGIIQGYVWAILTASYLKDAV 256
Cdd:COG0356   161 LLLAGLAPFLL--------LGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVYISLAV 210
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 29-259 1.17e-33

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 121.44  E-value: 1.17e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  29 IDLSCLNLTTFSLYTIIVLLVITSLYTLTNNNNKIIGSRWLISQEAIYDTIMNMTKGQIGGKNwGLYFPMIFTLFMFIFI 108
Cdd:PRK05815    7 IGFGGFNFDSLLLSVLLGVLILLLFALVATRKLSGVPGGLQNFVEMIVEFVRGQVKDNIGGKG-KKFAPLAFTLFLFILL 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 109 ANLISMIP-YSFALSAHLVFIISLSIVIWLGNTILGLYKHGWV-FFSLFVPAgtplpLVPLLVIIETLSYFARAISLGLR 186
Cdd:PRK05815   86 MNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGIKKKGLGgYLKEFYLQ-----PHPLLLPIEIISEFSRPISLSLR 160

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1789113460 187 LGSNILAGHLLMVILAGLTFnfmlinlFTLVFGFVPLAMILAIMMLEFAIGIIQGYVWAILTASYLKDAVYLH 259
Cdd:PRK05815  161 LFGNMLAGELILALIALLGG-------AGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYISMAVEEE 226
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 43-251 1.86e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 115.65  E-value: 1.86e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  43 TIIVLLVITSLYTLtnnnnkiIGSRWLISQEAIYDTIMNMTKGQIGGKNWGLYFPMIfTLFMFIFIANLISMIPYSFALS 122
Cdd:MTH00157   24 TFLGLLFIPSSFWL-------IPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFI-SLFSFILFNNFLGLFPYIFTST 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 123 AHLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVPLLVIIETLSYFARAISLGLRLGSNILAGHLLMVILA 202
Cdd:MTH00157   96 SHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHLLLTLLG 175

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1789113460 203 gltfNFMLINLFTLVFGFVPLAMILaiMMLEFAIGIIQGYVWAILTASY 251
Cdd:MTH00157  176 ----NTGPSLSSMILSILILIQILL--LILESAVAIIQSYVFSVLSTLY 218
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 57-259 1.09e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 111.96  E-value: 1.09e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  57 TNNNNKIIGSRWLISQEAIYDTIMNMTKGQIGGKNwGLYFPMIFTLFMFIFIANLISMIPYSFALSAHLVFIISLSIVIW 136
Cdd:MTH00174   53 KGNNNTLVPNRILVGLELIYSHFYTVLKDNLGNKG-GNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAII 131

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 137 LGNTILGLYKHGWVFFSLFVPAGTPLPLVPLLVIIETLSYFARAISLGLRLGSNILAGHLLMVILAglTFNFMLINLFTL 216
Cdd:MTH00174  132 VGTTLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIA--SFAWKMINTGIL 209

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1789113460 217 VFGFVPLAMILAIMMLEFAIGIIQGYVWAILTASYLKDAVYLH 259
Cdd:MTH00174  210 IGSFVPFAILIFVTILEMAVAIIQAYVFTLLTIVYLRDTVELH 252
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 24-254 2.36e-29

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 110.43  E-value: 2.36e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  24 LQSSFIDLSCLNLTTfslyTIIVLLVITSLYTLTN---NNNKIIGSRWLISQEAIYDTIMNMTKGQiggkNWGLyfpMIF 100
Cdd:MTH00101    5 LFASFITPTILGLPI----VTLIIMFPSLLFPTPNrliNNRLISIQQWLIQLTSKQMMTIHNTKGQ----TWSL---MLM 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 101 TLFMFIFIANLISMIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVPLLVIIETLSYFARA 180
Cdd:MTH00101   74 SLILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQP 153

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1789113460 181 ISLGLRLGSNILAGHLLMVILAGLTFNFMLINLFTLVFGFVPLAMilaIMMLEFAIGIIQGYVWAILTASYLKD 254
Cdd:MTH00101  154 MALAVRLTANITAGHLLIHLIGGATLALMSISTTTALITFIILIL---LTILEFAVALIQAYVFTLLVSLYLHD 224
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 44-252 3.29e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 110.04  E-value: 3.29e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  44 IIVLLVITSLYTLTNNNNKIIGSRWLISQEAIYDTIMNMTKGQIGGKNWGlYFPMIFTLFMFIFIANLISMIPYSFALSA 123
Cdd:MTH00179   19 LLALALLLPWLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHK-WAVLFLSLMLFLLTLNLLGLLPYTFTPTT 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 124 HLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVPLLVIIETLSYFARAISLGLRLGSNILAGHLLMVILAG 203
Cdd:MTH00179   98 QLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVRLTANITAGHLLMHLISS 177

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1789113460 204 LTFNFMlinLFTLVFGFVPLAMILAIMMLEFAIGIIQGYVWAILTASYL 252
Cdd:MTH00179  178 AVFVLM---NFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 64-252 3.84e-28

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 106.98  E-value: 3.84e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  64 IGSRWLISQEAIYDTIMNMTKgqiggKNWGLYFPMIFTLFMFIFIANLISMIPYSFALSAHLVFIISLSIVIWLGNTILG 143
Cdd:MTH00035   46 SQSIWLTFRQEILKLIFQNTN-----PNTAPWAGLLTTVFILILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILG 120

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 144 LYKHGWVFFSLFVPAGTPLPLVPLLVIIETLSYFARAISLGLRLGSNILAGHLLMVILAglTFNFMLINLFTLvfGFVPL 223
Cdd:MTH00035  121 FYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLRLAANLTAGHLLIFLLS--TAIWELSNSPLI--SIITL 196

                         170       180
                  ....*....|....*....|....*....
gi 1789113460 224 AMILAIMMLEFAIGIIQGYVWAILTASYL 252
Cdd:MTH00035  197 IIFFLLFILEIGVACIQAYVFTALVHFYL 225
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 32-243 1.41e-22

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 92.62  E-value: 1.41e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  32 SCLNLTTFSLYTIIVLLVITSLYTLTNNNNK--IIGSRWLISQeAIYDTIMNMTKGQIGGKNWGLYFPMIFTLFMFIFIA 109
Cdd:MTH00173    7 SSFDDHNSSFSSLSFLMWLLSLMSLFFFSSSvwVSSSNLSSVF-KLFVLTVSSQVTRSSGLNLGGFSLLLSSLFLFLISL 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 110 NLISMIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVPLLVIIETLSYFARAISLGLRLGS 189
Cdd:MTH00173   86 NLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTLTVRLLA 165

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1789113460 190 NILAGHLLMVILAG-LTFNFMLINLFTLVFGFVplaMILAIMMLEFAIGIIQGYV 243
Cdd:MTH00173  166 NISAGHIVLTLIGNyLSSSLFSSSVVSLLLVLL---IQVGYFIFEVAVMLIQAYI 217
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 43-252 1.92e-21

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 89.50  E-value: 1.92e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  43 TIIVLLVITSLyTLTNNNNKIIGSRWLISQEAIYDTIMN--MTKGQIGGKNWGLyfpMIFTLFMFIFIANLISMIPYSFA 120
Cdd:MTH00120   19 LILLAMLIPAL-LIPSPKNRLLTNRLTTLQLWLIKLITKqlMLPLNKKGHKWAL---ILTSLMLLLLLINLLGLLPYTFT 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 121 LSAHLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVPLLVIIETLSYFARAISLGLRLGSNILAGHLLMVI 200
Cdd:MTH00120   95 PTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALGVRLTANLTAGHLLIQL 174

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1789113460 201 LAGLTFNFMLINLFTLVFgfvPLAMILAIMMLEFAIGIIQGYVWAILTASYL 252
Cdd:MTH00120  175 ISTATLNLLPTMPTLSLL---TLIILLLLTILELAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 87-256 1.39e-20

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 86.85  E-value: 1.39e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  87 IGGKNWGLyfpMIFTLFMFIFIANLISMIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVP 166
Cdd:MTH00132   64 VGGHKWAL---LLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIP 140

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 167 LLVIIETLSYFARAISLGLRLGSNILAGHLLMVILAglTFNFMLINLFTLVfGFVPLAMILAIMMLEFAIGIIQGYVWAI 246
Cdd:MTH00132  141 VLIIIETISLFIRPLALGVRLTANLTAGHLLIQLIA--TAAFVLLPLMPTV-AILTATLLFLLTLLEVAVAMIQAYVFVL 217

                         170
                  ....*....|
gi 1789113460 247 LTASYLKDAV 256
Cdd:MTH00132  218 LLSLYLQENV 227
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 88-254 4.33e-20

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 85.85  E-value: 4.33e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  88 GGKNWGLYFPMIFTLFMFIFIANLISMIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVPL 167
Cdd:MTH00176   64 NGSYILGSASIIISLFILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPF 143

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 168 LVIIETLSYFARAISLGLRLGSNILAGHLLMVILAGLTFNFMLINLFTLVFGFVPLAMILaimMLEFAIGIIQGYVWAIL 247
Cdd:MTH00176  144 LVLIELVSLLIRPLTLAVRLAANLSAGHLLLGLLGAAMWGLLPVSPLIGFLLLIVQILYF---MFEIAVCMIQAYVFTLL 220


                  ....*..
gi 1789113460 248 TASYLKD 254
Cdd:MTH00176  221 LSLYLDE 227
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 87-256 5.26e-20

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 85.40  E-value: 5.26e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  87 IGGKNWGLyfpMIFTLFMFIFIANLISMIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVP 166
Cdd:MTH00073   64 TPGHKWAL---ILTSLMVFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIP 140

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 167 LLVIIETLSYFARAISLGLRLGSNILAGHLLMVILAGLTFNFMLINLFTLVFGFVPLamiLAIMMLEFAIGIIQGYVWAI 246
Cdd:MTH00073  141 ILIIIETISLFIRPLALGVRLTANLTAGHLLIQLISTATLVLLPLMPTVSILTMIVL---FLLTLLEIAVAMIQAYVFVL 217

                         170
                  ....*....|
gi 1789113460 247 LTASYLKDAV 256
Cdd:MTH00073  218 LLSLYLQENV 227
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 26-254 1.17e-19

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 84.78  E-value: 1.17e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  26 SSFIDLSCLNLTTFSLYTIIVLLVITSLYTLTNNNNKIIGSRWLisqeaiydTIMNMTKGQIGGKNWGLYFPMIFTLFMF 105
Cdd:MTH00005   12 ATNSLFNNLSSTAFWAFNFSIILLLSSSFWITPNRLSSIMSPPK--------STMHTQLSRTFGKHLKGFSSLISALFTM 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 106 IFIANLISMIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVPLLVIIETLSYFARAISLGL 185
Cdd:MTH00005   84 IILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSF 163

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 186 RLGSNILAGHllmvILAGLTFNFMLINLFTLVFGFVPLAMI-LAIMMLEFAIGIIQGYVWAILTASYLKD 254
Cdd:MTH00005  164 RLAANMSAGH----IVLSLIGIYAASALFSSISSTILLILTqMGYILFEVGICLIQAYIFCLLLSLYSDD 229
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 89-249 2.72e-12

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 65.53  E-value: 2.72e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  89 GKNWGLYFPMIFTLFMFIFIANLISMIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVPLL 168
Cdd:PRK13419  164 GHGYEKFLPYLLTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFFITQYAAIKAHGIKGYLAHLTGGTHWSLWIIM 243

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 169 VIIETLSYFARAISLGLRLGSNILAGHLlmVILAGLTFNFMLINLFTLVFGFVPLAmiLAIMMLEFAIGIIQGYVWAILT 248
Cdd:PRK13419  244 IPIEFIGLFTKPFALTVRLFANMTAGHI--VILSLIFISFILKSYIVAVAVSVPFA--IFIYLLELFVAFLQAYIFTMLS 319


                  .
gi 1789113460 249 A 249
Cdd:PRK13419  320 A 320
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 95-256 3.97e-09

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 55.47  E-value: 3.97e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  95 YFPMIFTLFMFIFIANLISMIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHG-WVFFSLFvpaGTPLPLVPLLVIIET 173
Cdd:PRK13421   77 YRALIGTLFLFVLVANWSSLVPGVEPPTAHLETDAALALIVFLATIYYGVRARGvRGYLATF---AEPTWVMIPLNLVEQ 153

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 174 LSyfaRAISLGLRLGSNILAGHLLMVI---LAGLtfnfmlinlftlvfgFVPLAMilaiMMLEFAIGIIQGYVWAILTAS 250
Cdd:PRK13421  154 LT---RTFSLIVRLFGNVMSGVFVIGIvlsLAGL---------------LVPIPL----MALDLLTGAVQAYIFAVLAMV 211


                  ....*.
gi 1789113460 251 YLKDAV 256
Cdd:PRK13421  212 FIGAAV 217
atpI CHL00046
ATP synthase CF0 A subunit
 45-251 4.41e-09

ATP synthase CF0 A subunit


Pssm-ID: 176987  Cd Length: 228  Bit Score: 55.32  E-value: 4.41e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  45 IVLLVITSLYTLTNNNNKIIGSRWLISQEAIYDTIMNMTKGQIGGKNWGLYFPMIFTLFMFIFIANLI-SMIPYSFALSA 123
Cdd:CHL00046   31 VVIAILLGSALLATRNLQTIPTGGQNFFEYVLEFIRDLAKTQIGEEEYRPWVPFIGTMFLFIFVSNWSgALLPWKLIELP 110

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 124 HLVF---------IISLSIVIWLGNTILGLYKHGWVFFSLFVpagTPLplvPLLVIIETLSYFARAISLGLRLGSNILAG 194
Cdd:CHL00046  111 HGELaaptndintTVALALLTSVAYFYAGLSKKGLGYFGKYI---QPT---PILLPINILEDFTKPLSLSFRLFGNILAD 184

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1789113460 195 HLLMVILAGLtfnfmlinlftlvfgfVPLAMILAIMMLEFAIGIIQGYVWAILTASY 251
Cdd:CHL00046  185 ELVVAVLVSL----------------VPLVVPIPVMFLGLFTSGIQALIFATLAAAY 225
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 34-259 6.81e-07

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 48.97  E-value: 6.81e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  34 LNLTTFSLYTIIVLLVITSLYTLTNNNNKIIGSRWLISQEAIYDTIMNMTKGQIGgKNWGLYFPMIFTLFMFIFIANLIS 113
Cdd:PRK13420   14 LPITESVLTTWGIMIVLVLASWLTTRRLSLDPGRFQVALEGVVSTIEDAIKEVLP-RHARLVLPFVGTLWIFILVANLIG 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 114 MIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHGWV--FFSLFVPAgtplplvPLLVIIETLSYFARAISLGLRLGSNI 191
Cdd:PRK13420   93 LIPGFHSPTADLSVTAALALLVFFSVHWFGIRAEGLReyLKHYLSPS-------PFLLPFHLISEITRTLALAVRLFGNI 165

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1789113460 192 LA---GHLLMVILAGLtfnfmlinlftlvfgFVPlamiLAIMMLEFAIGIIQGYVWAILTASYLKDAVYLH 259
Cdd:PRK13420  166 MSlelAALLVLLVAGF---------------LVP----VPILMLHIIEALVQAYIFGMLALIYIAGGIQAH 217
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 100-253 8.02e-06

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 45.35  E-value: 8.02e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 100 FTLFMFIFIANLISMIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHGWvfFSLFVPAGTPLPLVPL-LVIIETLSYFA 178
Cdd:MTH00087   56 FFTFIVLLLFCFGGLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKSEK--FSVYLSKGSDSFLKTFsMLFVEIVSELS 133

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1789113460 179 RAISLGLRLGSNILAGHLLMVILAGLTFNFMLInlftlvfgfvplaMILAIMMlEFAIGIIQGYVWAILTASYLK 253
Cdd:MTH00087  134 RPLALTLRLTVNLMVGHLISSLLNFLGEKYVWL-------------SILAIMM-ECFVAFIQSYIFSRLIYLYLN 194
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 95-259 1.26e-05

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 45.65  E-value: 1.26e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460  95 YFPMIFTLFMFIFIANLISMIPYSFALSA---HLVFIISLSIV------------IWLGNTILG---------------L 144
Cdd:PRK13417  157 YYHYIFTLFFFILFCNLMGLVPSVGELTVvasDYGGLVALGVMdhtphalptfakVWSGITVTGdisvtmtlalltmflI 236

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 145 YKHGWV-----FFSLFVPAGTPLPLVPLLVIIE-TLSYFARAISLGLRLGSNILAGHLLMVILAGLTFNFMlinlftlVF 218
Cdd:PRK13417  237 YGAGFSyqgpkFIWHSVPNGVPLLLYPIMWPLEfIVSPMAKTFALTVRLLANMTAGHVIILALMGFIFQFQ-------SW 309

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1789113460 219 GFVPLAMILA--IMMLEFAIGIIQGYVWAILTASYLKDAVYLH 259
Cdd:PRK13417  310 GIVPVSVIGSglIYVLEIFVAFLQAYIFVLLTSLFVGLSMHRH 352
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 100-220 3.62e-05

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 42.95  E-value: 3.62e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1789113460 100 FTLFMFIFIANLISMIPYSFALSAHLVFIISLSIVIWLGNTILGLYKHGWVFFSLFVPAGTPLPLVPLLVIIETLSYFAR 179
Cdd:MTH00050   27 SVVLFIVLFLFLLYRLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYIIR 106

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1789113460 180 AISLGLRLGSNILAGHLLMVILAGLTFNFMLINLFTLVFGF 220
Cdd:MTH00050  107 PVVLILRPFINISLGCFGGVALGNLCFISYWWFLVLFFLFF 147
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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