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Conserved domains on  [gi|1802566923|gb|QHQ98428|]
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NADH dehydrogenase subunit 4 (mitochondrion) [Bos taurus]

Protein Classification

NADH dehydrogenase subunit 4( domain architecture ID 11475903)

NADH dehydrogenase subunit 4 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND4 MTH00110
NADH dehydrogenase subunit 4; Provisional
1-459 0e+00

NADH dehydrogenase subunit 4; Provisional


:

Pssm-ID: 177172 [Multi-domain]  Cd Length: 459  Bit Score: 816.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923   1 MLKYIIPTIMLMPLTWLSKNSMIWVNSTAHSLLISFTSLLLMNQFGDNSLNFSLVFFSDSLSTPLLILTMWLLPLMLMAS 80
Cdd:MTH00110    1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  81 QHHLSKENLTRKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00110   81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 161 LVALIYIQNTVGSLNFLMLQYWVQPVHNSWSNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00110  161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 241 YGMLRITLILNPMTDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHG 320
Cdd:MTH00110  241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGVNM 400
Cdd:MTH00110  321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1802566923 401 VITALYSLYMLIMTQRGKYTYHINNISPSFTRENALMSLHILPLLLLTLNPKIILGPLY 459
Cdd:MTH00110  401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
 
Name Accession Description Interval E-value
ND4 MTH00110
NADH dehydrogenase subunit 4; Provisional
1-459 0e+00

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177172 [Multi-domain]  Cd Length: 459  Bit Score: 816.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923   1 MLKYIIPTIMLMPLTWLSKNSMIWVNSTAHSLLISFTSLLLMNQFGDNSLNFSLVFFSDSLSTPLLILTMWLLPLMLMAS 80
Cdd:MTH00110    1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  81 QHHLSKENLTRKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00110   81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 161 LVALIYIQNTVGSLNFLMLQYWVQPVHNSWSNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00110  161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 241 YGMLRITLILNPMTDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHG 320
Cdd:MTH00110  241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGVNM 400
Cdd:MTH00110  321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1802566923 401 VITALYSLYMLIMTQRGKYTYHINNISPSFTRENALMSLHILPLLLLTLNPKIILGPLY 459
Cdd:MTH00110  401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
NuoM COG1008
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ...
59-411 7.49e-83

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440632 [Multi-domain]  Cd Length: 488  Bit Score: 263.48  E-value: 7.49e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  59 DSLSTPLLILTMWLLPLMLMASqhhlSKENLTRKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGN 138
Cdd:COG1008    81 DGISLPLVLLTALLTPLAILAS----WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 139 QtERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQyWVQPVHNSWSNVFMWLACMMAFMVKMPLYGLHLWLPK 218
Cdd:COG1008   157 E-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAE-LAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPD 234
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 219 AHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPM-TDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:COG1008   235 AHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFV 314
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 298 IVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIG 377
Cdd:COG1008   315 LLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
                         330       340       350
                  ....*....|....*....|....*....|....
gi 1802566923 378 ELFVVMSTFSWSNITIILMGVNMVITALYSLYML 411
Cdd:COG1008   395 EFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
NDH_I_M TIGR01972
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ...
59-411 2.84e-73

proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273903 [Multi-domain]  Cd Length: 481  Bit Score: 238.30  E-value: 2.84e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  59 DSLSTPLLILTMWLLPLMLMASQHHLSKenltRKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGN 138
Cdd:TIGR01972  76 DGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGG 151
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 139 QTeRLNAGLYFLFYTLAGSLPLLVALIYIQnTVGSLNFLMLQYWVQPVhNSWSNVFMWLACMMAFMVKMPLYGLHLWLPK 218
Cdd:TIGR01972 152 PN-RIYAAMKFFLYTLAGSLLMLLAILGLY-FLGGGTFDLLELLNLPL-PFGVQTWLFLAFFIAFAVKVPLFPLHTWLPD 228
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 219 AHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPMTDFMAYPFIM-LSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:TIGR01972 229 AHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAaLGVIAIIYGALIALAQTDIKRLIAYSSISHMGFV 308
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 298 IVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIG 377
Cdd:TIGR01972 309 LLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVG 388
                         330       340       350
                  ....*....|....*....|....*....|....
gi 1802566923 378 ELFVVMSTFSWSNITIILMGVNMVITALYSLYML 411
Cdd:TIGR01972 389 EFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
112-398 2.23e-68

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 219.88  E-value: 2.23e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 112 AMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQYWVQPVHNSWS 191
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 192 NVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPMTDFMAYPFIMLSLWGMIM 271
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 272 TSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANS-NYERIHSRTMILARGLQT 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1802566923 351 LLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGV 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
 
Name Accession Description Interval E-value
ND4 MTH00110
NADH dehydrogenase subunit 4; Provisional
1-459 0e+00

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177172 [Multi-domain]  Cd Length: 459  Bit Score: 816.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923   1 MLKYIIPTIMLMPLTWLSKNSMIWVNSTAHSLLISFTSLLLMNQFGDNSLNFSLVFFSDSLSTPLLILTMWLLPLMLMAS 80
Cdd:MTH00110    1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSLNFSLLFFSDSLSTPLLILTTWLLPLMLMAS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  81 QHHLSKENLTRKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00110   81 QHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLPL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 161 LVALIYIQNTVGSLNFLMLQYWVQPVHNSWSNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00110  161 LVALLYIQNNLGSLNFLLLQLWAQPLPNSWSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 241 YGMLRITLILNPMTDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHG 320
Cdd:MTH00110  241 YGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIAHG 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGVNM 400
Cdd:MTH00110  321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGLNM 400
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1802566923 401 VITALYSLYMLIMTQRGKYTYHINNISPSFTRENALMSLHILPLLLLTLNPKIILGPLY 459
Cdd:MTH00110  401 LITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKIILGPTY 459
ND4 MTH00124
NADH dehydrogenase subunit 4; Provisional
1-457 0e+00

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214427 [Multi-domain]  Cd Length: 457  Bit Score: 634.54  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923   1 MLKYIIPTIMLMPLTWLSKNSMIWVNSTAHSLLISFTSLLLMNQFGDNSLNFSLVFFSDSLSTPLLILTMWLLPLMLMAS 80
Cdd:MTH00124    1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILAS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  81 QHHLSKENLTRKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00124   81 QNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 161 LVALIYIQNTVGSLNFLMLQYWVQPVHNSWSNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00124  161 LIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGG 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 241 YGMLRITLILNPMTDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHG 320
Cdd:MTH00124  241 YGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHG 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGVNM 400
Cdd:MTH00124  321 LTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLAT 400
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1802566923 401 VITALYSLYMLIMTQRGKYTYHINNISPSFTRENALMSLHILPLLLLTLNPKIILGP 457
Cdd:MTH00124  401 LITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELISGT 457
ND4 MTH00068
NADH dehydrogenase subunit 4; Provisional
1-456 0e+00

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214417 [Multi-domain]  Cd Length: 458  Bit Score: 589.19  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923   1 MLKYIIPTIMLMPLTWLSKNSMIWVNSTAHSLLISFTSLLLMNQFGDNSLNFSLVFFSDSLSTPLLILTMWLLPLMLMAS 80
Cdd:MTH00068    1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILAS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  81 QHHLSKENLTRKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00068   81 QNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 161 LVALIYIQNTVGSLNFLMLQYWVQPVHNSWSNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00068  161 LIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGG 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 241 YGMLRITLILNPMTDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHG 320
Cdd:MTH00068  241 YGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHG 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGVNM 400
Cdd:MTH00068  321 LTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGT 400
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1802566923 401 VITALYSLYMLIMTQRGKYTYHINNISPSFTRENALMSLHILPLLLLTLNPKIILG 456
Cdd:MTH00068  401 LITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISG 456
ND4 MTH00127
NADH dehydrogenase subunit 4; Provisional
1-456 3.42e-179

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177186 [Multi-domain]  Cd Length: 459  Bit Score: 509.11  E-value: 3.42e-179
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923   1 MLKYIIPTIMLMPLTWLSKNSMIWVNSTAHSLLISFTSLLLMNQFGDNSLNFSLVFF-SDSLSTPLLILTMWLLPLMLMA 79
Cdd:MTH00127    1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMaTDPLSTPLLVLTCWLLPLMILA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  80 SQHHLSKENLTRKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLP 159
Cdd:MTH00127   81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 160 LLVALIYIQNTVGSLNFLMLQYWVQPVHNSWSNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:MTH00127  161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 240 GYGMLRITLILNPMTDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAH 319
Cdd:MTH00127  241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 320 GLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGVN 399
Cdd:MTH00127  321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1802566923 400 MVITALYSLYMLIMTQRGKYTYHINNISPSFTRENALMSLHILPLLLLTLNPKIILG 456
Cdd:MTH00127  401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWG 457
ND4 MTH00206
NADH dehydrogenase subunit 4; Provisional
3-454 8.07e-163

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214458 [Multi-domain]  Cd Length: 450  Bit Score: 467.11  E-value: 8.07e-163
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923   3 KYIIPTIMLMPLTWLSKNSMIWVNSTAHSLLISFTSLLLMNQFGDNSLNFSLVFFS-DSLSTPLLILTMWLLPLMLMASQ 81
Cdd:MTH00206    1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSyDPLSSPLVILSCWLLPLMFLASQ 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  82 HHLSKENLTRKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLL 161
Cdd:MTH00206   81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 162 VALIYIQNTVGSLNFLMLQYWVQpvhNSWSNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 241
Cdd:MTH00206  161 IALLFLQNSLGSLSLYILYFSKL---TTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 242 GMLRITLILNPMTDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGL 321
Cdd:MTH00206  238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 322 TSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGVNMV 401
Cdd:MTH00206  318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1802566923 402 ITALYSLYMLIMTQRGKYTYHINNISPSFTRENALMSLHILPLLLLTLNPKII 454
Cdd:MTH00206  398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
ND4 MTH00044
NADH dehydrogenase subunit 4; Validated
1-455 5.10e-148

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214411 [Multi-domain]  Cd Length: 458  Bit Score: 429.78  E-value: 5.10e-148
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923   1 MLKYIIPTIMLMPLTWLSKNSMIWVNSTAHSLLISFTSLLLM-NQFGDNSLNFSLVFFSDSLSTPLLILTMWLLPLMLMA 79
Cdd:MTH00044    1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLnNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  80 SQHHLSKENLTRKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLP 159
Cdd:MTH00044   81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 160 LLVALIYIQNTVGSLNFLMLQYWVQPVHNSWSNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLG 239
Cdd:MTH00044  161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 240 GYGMLRITLILN-PMTDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIA 318
Cdd:MTH00044  241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 319 HGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGV 398
Cdd:MTH00044  321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1802566923 399 NMVITALYSLYMLIMTQRGKYTYHINNISPSFTRENALMSLHILPLLLLTLNPKIIL 455
Cdd:MTH00044  401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIIL 457
ND4 MTH00163
NADH dehydrogenase subunit 4; Provisional
1-437 1.35e-116

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214443 [Multi-domain]  Cd Length: 445  Bit Score: 349.07  E-value: 1.35e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923   1 MLKYIIPTIMLMPLTWLSKNSMIWVNStahsLLISFTSLLLMNQFGDNSLNFSLVFFSDSLSTPLLILTMWLLPLMLMAS 80
Cdd:MTH00163    1 MLKFLFMLLFLIPLCFLKNSWWLVQSL----LFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSS 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  81 QHHLSKENLtrKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00163   77 ESVYKKNNY--SNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPL 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 161 LVALIYIQNTVGSLNFLMLQYwvqpvhNSWSNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00163  155 LVGIFYLYNNSGSLSFFLLNF------FGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGG 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 241 YGMLRITLILNPMTDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHG 320
Cdd:MTH00163  229 YGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHG 308
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGVNM 400
Cdd:MTH00163  309 LCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLS 388
                         410       420       430
                  ....*....|....*....|....*....|....*..
gi 1802566923 401 VITALYSLYMLIMTQRGKYTYHINNISPSFTRENALM 437
Cdd:MTH00163  389 FFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLL 425
ND4 MTH00150
NADH dehydrogenase subunit 4; Provisional
38-437 1.03e-114

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214435 [Multi-domain]  Cd Length: 417  Bit Score: 343.36  E-value: 1.03e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  38 SLLLMNQFGDNSLNFSLVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENltRKKLFITMLISLQLFLIMTFTAMELIL 117
Cdd:MTH00150    2 SLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRN--KSSSFSLLVLLLCLILVLAFSVSSLLM 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 118 FYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQYWVQPVHNSWsnvFMWL 197
Cdd:MTH00150   80 FYFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGL 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 198 ACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPMTDFMAYPFIMLSLWGMIMTSSICL 277
Cdd:MTH00150  157 LVFLAFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICL 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 278 RQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMAT 357
Cdd:MTH00150  237 RQSDVKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSL 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 358 WWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGVNMVITALYSLYMLIMTQRGKYTYHINNISPSFTRENALM 437
Cdd:MTH00150  317 WWFLFCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLL 396
ND4 MTH00205
NADH dehydrogenase subunit 4; Provisional
5-454 1.68e-104

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214457 [Multi-domain]  Cd Length: 448  Bit Score: 318.08  E-value: 1.68e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923   5 IIPTIMLMPLTWLSKNSMIWVNSTAHSLLISFTSLLLMNQFGDNSLNFSLVFFSDSLSTPLLILTMWLLPLMLMASQHHL 84
Cdd:MTH00205    2 SIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVF 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  85 SKENltRKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVAL 164
Cdd:MTH00205   82 KSNK--NSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGL 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 165 IYIQNTVGSLNFLMLqywVQPVHNSWSNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGML 244
Cdd:MTH00205  160 FFLNSLNFSLSMFFN---FPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLI 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 245 RITLILNPMTDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSS 324
Cdd:MTH00205  237 RITSMLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSS 316
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 325 MLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGVNMVITA 404
Cdd:MTH00205  317 GMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSG 396
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|
gi 1802566923 405 LYSLYMLIMTQRGKYTYHINNISPSFTRENALMSLHILPLLLLTLNPKII 454
Cdd:MTH00205  397 AYSLYLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIF 446
ND4 MTH00014
NADH dehydrogenase subunit 4; Validated
1-454 4.10e-103

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214399 [Multi-domain]  Cd Length: 452  Bit Score: 314.76  E-value: 4.10e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923   1 MLKYIIPTIMLMPLTwLSKNSMIWVNSTAHSLLISFTSLLLMNQFGDNSLNFSLVFFSDSLSTPLLILTMWLLPLMLMAS 80
Cdd:MTH00014    1 MLKLIMPLISLLLLP-LIKYPWSWALTFSTLLLLSLFTLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILAS 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  81 QHHLSKENLTrkKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPL 160
Cdd:MTH00014   80 FKIFQNNKAP--KTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPL 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 161 LVALIYIQNTVGSLNFLMLQYWVqpvHNSWSNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGG 240
Cdd:MTH00014  158 LMSILLIFYTNNSLSMLMSSMEP---PSIYLMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGG 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 241 YGMLRITLILNPMTDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHG 320
Cdd:MTH00014  235 YGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHG 314
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGVNM 400
Cdd:MTH00014  315 LCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITS 394
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1802566923 401 VITALYSLYMLIMTQRGKYTYHINNISPSFTRENALMSLHILPLLLLTLNPKII 454
Cdd:MTH00014  395 FLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
NuoM COG1008
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ...
59-411 7.49e-83

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440632 [Multi-domain]  Cd Length: 488  Bit Score: 263.48  E-value: 7.49e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  59 DSLSTPLLILTMWLLPLMLMASqhhlSKENLTRKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGN 138
Cdd:COG1008    81 DGISLPLVLLTALLTPLAILAS----WNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG 156
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 139 QtERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQyWVQPVHNSWSNVFMWLACMMAFMVKMPLYGLHLWLPK 218
Cdd:COG1008   157 E-RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAE-LAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPD 234
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 219 AHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPM-TDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:COG1008   235 AHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFV 314
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 298 IVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIG 377
Cdd:COG1008   315 LLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVG 394
                         330       340       350
                  ....*....|....*....|....*....|....
gi 1802566923 378 ELFVVMSTFSWSNITIILMGVNMVITALYSLYML 411
Cdd:COG1008   395 EFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
PRK05846 PRK05846
NADH:ubiquinone oxidoreductase subunit M; Reviewed
59-410 3.79e-77

NADH:ubiquinone oxidoreductase subunit M; Reviewed


Pssm-ID: 235622 [Multi-domain]  Cd Length: 497  Bit Score: 248.96  E-value: 3.79e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  59 DSLSTPLLILTMWLLPLMLMASQHHLSKenltRKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGn 138
Cdd:PRK05846   81 DGISLLLVVLTALLTPLAVLASWEEIKK----RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG- 155
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 139 QTERLNAGLYFLFYTLAGSLPLLVALIYI----QNTVGSLNFlmlQYWVQPVHNSWSNVFMWLACMMAFMVKMPLYGLHL 214
Cdd:PRK05846  156 GKNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDI---ADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHT 232
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 215 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNP-MTDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:PRK05846  233 WLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISH 312
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 294 MALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTI 373
Cdd:PRK05846  313 MGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTS 392
                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 1802566923 374 NLIGELFVVMSTFSWSNITIILMGVNMVITALYSLYM 410
Cdd:PRK05846  393 GFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWL 429
NDH_I_M TIGR01972
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ...
59-411 2.84e-73

proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273903 [Multi-domain]  Cd Length: 481  Bit Score: 238.30  E-value: 2.84e-73
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  59 DSLSTPLLILTMWLLPLMLMASQHHLSKenltRKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGN 138
Cdd:TIGR01972  76 DGISLLLVLLTALLTLLAILASWESIQK----RVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWGG 151
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 139 QTeRLNAGLYFLFYTLAGSLPLLVALIYIQnTVGSLNFLMLQYWVQPVhNSWSNVFMWLACMMAFMVKMPLYGLHLWLPK 218
Cdd:TIGR01972 152 PN-RIYAAMKFFLYTLAGSLLMLLAILGLY-FLGGGTFDLLELLNLPL-PFGVQTWLFLAFFIAFAVKVPLFPLHTWLPD 228
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 219 AHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPMTDFMAYPFIM-LSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV 297
Cdd:TIGR01972 229 AHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAaLGVIAIIYGALIALAQTDIKRLIAYSSISHMGFV 308
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 298 IVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIG 377
Cdd:TIGR01972 309 LLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVG 388
                         330       340       350
                  ....*....|....*....|....*....|....
gi 1802566923 378 ELFVVMSTFSWSNITIILMGVNMVITALYSLYML 411
Cdd:TIGR01972 389 EFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
ND4 MTH00217
NADH dehydrogenase subunit 4; Provisional
53-410 1.21e-69

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214462 [Multi-domain]  Cd Length: 482  Bit Score: 229.17  E-value: 1.21e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  53 SLVFFSDSLSTPLLILTMWLLPLMLMASQH---HLSKEnltrkklFITMLISLQLFLIMTFTAMELILFYILFEATLVPT 129
Cdd:MTH00217   73 PVVFAVDGISIFFLILTALLTPICILISWNsikFLIKE-------FLLCLLVIEILLMGVFTILDLVGFYILFEGILIPM 145
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 130 LIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFlmlQYWVQPVHNSWSNVFMWLACMMAFMVKMPL 209
Cdd:MTH00217  146 FLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDY---QALCCLKIEKELQYFIFLGFFLSLAIKIPK 222
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 210 YGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPMTDFMAYPFIM-LSLWGMIMTSSICLRQTDLKSLIAY 288
Cdd:MTH00217  223 IPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQtLSLLAIIYGSLTTCRQVDLKRIIAY 302
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 289 SSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLA 368
Cdd:MTH00217  303 SSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANAS 382
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1802566923 369 LPPTINLIGELFVVMSTFSWSNITIILMGVNMVITALYSLYM 410
Cdd:MTH00217  383 IPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYL 424
ND4 MTH00204
NADH dehydrogenase subunit 4; Provisional
28-410 6.16e-69

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 164750 [Multi-domain]  Cd Length: 485  Bit Score: 227.25  E-value: 6.16e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  28 TAHSLLISFTSLLLMNQFGDNSLNF---SLVFFSDSLSTPLLILTMWLLPLMLMASQH---HLSKEnltrkklFITMLIS 101
Cdd:MTH00204   48 GAFDGEGQFQFINLIEWIISPTLNFqwgPLVFAVDGVSLFFILLTTLLIPICILISWKsikFLFKE-------FLLCLLF 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 102 LQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQY 181
Cdd:MTH00204  121 LEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLN 200
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 182 WVQPvhnswSNVFMWL--ACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPMTDFMAY 259
Cdd:MTH00204  201 IKLP-----LSIQKWLlvGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFA 275
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 260 PFI-MLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIH 338
Cdd:MTH00204  276 PLIvMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHH 355
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1802566923 339 SRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGVNMVITALYSLYM 410
Cdd:MTH00204  356 TRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYL 427
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
112-398 2.23e-68

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 219.88  E-value: 2.23e-68
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 112 AMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQYWVQPVHNSWS 191
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 192 NVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPMTDFMAYPFIMLSLWGMIM 271
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 272 TSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANS-NYERIHSRTMILARGLQT 350
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSvIYRRVHTRNIRDYGGLAK 240
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 1802566923 351 LLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGV 398
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGV 288
ND4 MTH00226
NADH dehydrogenase subunit 4; Provisional
54-409 5.82e-63

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214466 [Multi-domain]  Cd Length: 505  Bit Score: 212.09  E-value: 5.82e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  54 LVFFSDSLSTPLLILTMWLLPLMLMASQHHLskeNLTRKKLFITMLIsLQLFLIMTFTAMELILFYILFEATLVPTLIII 133
Cdd:MTH00226   96 LVFAVDGISIYFIILTGFIVPCSILISWHSV---KYLTKSFLICMLI-LEFLLYAVFSVLDIFMFYILFEGVLIPMYLIL 171
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 134 TRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLML---QYWVQPVHNSWsnvfMWLACMMAFMVKMPLY 210
Cdd:MTH00226  172 GIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLascSHVVSEQTQKW----IFLGIFLAMAVKIPIF 247
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 211 GLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPM-TDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYS 289
Cdd:MTH00226  248 PFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLgAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYS 327
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 290 SVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLAL 369
Cdd:MTH00226  328 SVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAV 407
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|
gi 1802566923 370 PPTINLIGELFVVMSTFSWSNITIILMGVNMVITALYSLY 409
Cdd:MTH00226  408 PPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
ND4 MTH00094
NADH dehydrogenase subunit 4; Provisional
54-430 1.27e-45

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177157 [Multi-domain]  Cd Length: 403  Bit Score: 163.15  E-value: 1.27e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  54 LVFFSDSLSTPLLILTMWLLPLMLMASqhhlskeNLTRKKLFITMLisLQLFLIMTFTAMELILFYILFEATLVPTLIII 133
Cdd:MTH00094   32 LFFFFDSFVFVLLIFMMVFILGLVLLS-------EKNFNLLILSNL--LILICLLFFVSSNMLMLYMFFELSMFPILIMI 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 134 TRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYiqntvgslNFLMLQYWVQPVHNSWSNVFMwlaCMMAFMVKMPLYGLH 213
Cdd:MTH00094  103 LGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLK--------NFFFFSLCYFDFFLSWEMFFI---LSLSFMMKFPVYFLH 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 214 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRitlILNPMTDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSH 293
Cdd:MTH00094  172 LWLPKAHVEAPTTASMLLAGLLLKLGTAGFLR---ILGSLNFVYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVTH 248
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 294 MALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTI 373
Cdd:MTH00094  249 MSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPSL 328
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1802566923 374 NLIGELFVVMSTFSWSNITIILMGVNMVITALYSLYMLIMTQRGKYTYHINNISPSF 430
Cdd:MTH00094  329 SFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGL 385
PRK12561 PRK12561
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
59-411 2.73e-45

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 237137 [Multi-domain]  Cd Length: 504  Bit Score: 164.82  E-value: 2.73e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  59 DSLSTPLLILTMWLLPLMLMASQhhlskeNLTRK-KLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWG 137
Cdd:PRK12561   58 DGLSMPLVLLSGLITTLSIFASW------KVTRKpRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWG 131
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 138 NQtERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQYWVQPVHNSWSnVFMWLACMMAFMVKMPLYGLHLWLP 217
Cdd:PRK12561  132 GQ-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLAELGAKSYPLALE-LLLYAGFLIAFGVKLPIFPLHTWLP 209
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 218 KAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPMTD-FMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMAL 296
Cdd:PRK12561  210 DAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHvYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGF 289
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 297 VIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLI 376
Cdd:PRK12561  290 VLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFV 369
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1802566923 377 GELFVVMS-------TFSWSNITIILMGVNMVITALYSLYML 411
Cdd:PRK12561  370 SELTVFLGitssdvySSTFRTITILLAAVGLILTPIYLLSML 411
HyfB COG0651
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ...
44-415 1.26e-42

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 440416 [Multi-domain]  Cd Length: 430  Bit Score: 155.69  E-value: 1.26e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  44 QFGDNSLNFSLVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKEnlTRKKLFITMLISLQLFLIMTFTAMELILFYILFE 123
Cdd:COG0651    60 ALGGWPAPFGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHE--RRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFE 137
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 124 ATLVPTLIIITRWGNQtERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQYWVQPVHNSWSNVFMWLAcMMAF 203
Cdd:COG0651   138 VMLLASYGLVALGGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFALL-LVGF 215
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 204 MVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNP--MTDFMAYPFIMLSLWGMIMTSSICLRQTD 281
Cdd:COG0651   216 GIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGadPALFLGTLLLVLGLLTMLVGALGALAQRD 295
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 282 LKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLL 361
Cdd:COG0651   296 LKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLI 375
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1802566923 362 ASLTNLALPPTINLIGELFVVMSTFSWSN-ITIILMGVNMVITALYSLYMLIMTQ 415
Cdd:COG0651   376 GALALAGLPPLSGFVSKWLLLQAALEAGAwLLAAVLLLSSLLTLAYFVRIFGRAQ 430
PRK06473 PRK06473
NADH-quinone oxidoreductase subunit M;
48-416 2.72e-39

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 235810 [Multi-domain]  Cd Length: 500  Bit Score: 148.31  E-value: 2.72e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  48 NSLNFSLVFFSDSLSTPLLILTMWLLPLMLMASQhhlskENLTRKKLFITMLISLQLFLIMTFTAMELILFYILFEATLV 127
Cdd:PRK06473   67 DSLGLSYHLGVDGLSLPLLVLNSLLTLIAIYSSD-----ESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELI 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 128 PTLIIITRWGNQtERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFlmlQYWVQPVHN--SWSNVFMWLACMMAFMV 205
Cdd:PRK06473  142 PLYLLIAIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLVWLSGASSF---DYEPLRSHTlpLSTQLLLLAPILVGFGI 217
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 206 KMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPMTDFMAYPFimLSLWGMIMT---SSICLRQTDL 282
Cdd:PRK06473  218 KIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPW--LATWAVVSVlygASCAIAQKDM 295
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 283 KSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGL---QTLLPLMATWW 359
Cdd:PRK06473  296 KKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLM 375
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1802566923 360 LLASLTNLALPPTINLIGELFVVMSTFSWSNITIILmgvNMVITALYSLYMLIMTQR 416
Cdd:PRK06473  376 ILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLL---CMIGTGLTAVYFLLLVNR 429
PRK02546 PRK02546
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
58-411 1.45e-36

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 235050 [Multi-domain]  Cd Length: 525  Bit Score: 141.00  E-value: 1.45e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  58 SDSLSTPLLILTMWLLPLMLMASQHHLSKenltrKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWG 137
Cdd:PRK02546   85 ADGLSMPLILLTGFITTLAVLAAWPVTFK-----PKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWG 159
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 138 NQtERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQYWVQPVHNSWsNVFMWLACMMAFMVKMPLYGLHLWLP 217
Cdd:PRK02546  160 GK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMTALAAKDFGLGF-QLLCYAGLLIAYGVKLPIVPLHTWLP 237
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 218 KAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPMTDFMAYP-FIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMAL 296
Cdd:PRK02546  238 DAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPlLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGF 317
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 297 VIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLI 376
Cdd:PRK02546  318 VLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFV 397
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|..
gi 1802566923 377 GELFVVMS-------TFSWSNITIILMGVNMVITALYSLYML 411
Cdd:PRK02546  398 AELMVFVGfatsdayTLPFRVVVVFLAAVGVILTPIYLLSML 439
ndhD CHL00011
NADH dehydrogenase subunit 4
48-430 3.85e-36

NADH dehydrogenase subunit 4


Pssm-ID: 176954 [Multi-domain]  Cd Length: 498  Bit Score: 139.31  E-value: 3.85e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  48 NSLNFSLVFFSDSLSTPLLILTMWLLPLMLMASQhhlskeNLTRK-KLFITMLISLQLFLIMTFTAMELILFYILFEATL 126
Cdd:CHL00011   72 NFFDFHWRLGIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELEL 145
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 127 VPTLIIITRWGNQtERLNAGLYFLFYTLAGSLPLLVALIYIQ---NTVGSLNFLMLQYWVQPVHnswSNVFMWLACMMAF 203
Cdd:CHL00011  146 IPVYLLLSMWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGlygSNEPTLNFETLANQSYPVA---LEILFYIGFLIAY 221
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 204 MVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPMTDFMAYPFIML-SLWGMIMTSSICLRQTDL 282
Cdd:CHL00011  222 AVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIvGAIQIIYAASTSLGQRNL 301
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 283 KSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIhsRTMILAR--GLQTLLPLMATWWL 360
Cdd:CHL00011  302 KKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFS 379
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1802566923 361 LASLTNLALPPTINLIGELFVVMSTFSWSN-------ITIILMGVNMVITALYSLYMLimtQRGKYTYHINNISPSF 430
Cdd:CHL00011  380 SFSMASLALPGMSGFVAELIVFFGIITSQKyllmpkiLITFVMAIGMILTPIYLLSML---RQMFYGYKLFNVPNSY 453
PRK07363 PRK07363
NADH-quinone oxidoreductase subunit M;
59-418 3.93e-32

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 180945 [Multi-domain]  Cd Length: 501  Bit Score: 127.91  E-value: 3.93e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  59 DSLSTPLLILTMWLLPLMLMASQhhlskENLTRKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGN 138
Cdd:PRK07363   78 DGLSLPLLVLNSLLTWIAIYSIG-----ENTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG 152
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 139 QtERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQYWVQPVHNSwSNVFMWLACMMAFMVKMPLYGLHLWLPK 218
Cdd:PRK07363  153 E-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYDAISTQNLSLN-TQLILLTGLLLGFGIKIPLVPLHTWLPD 230
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 219 AHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPMTDFMAYPfiMLSLWGMIMT---SSICLRQTDLKSLIAYSSVSHMA 295
Cdd:PRK07363  231 AYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTISViygALSAIAQKDIKRMVAYSSIGHMG 308
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 296 LVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTL---LPLMATWWLLASLTNLALPPT 372
Cdd:PRK07363  309 YILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLPLTSALLVLAGMASAGIPGL 388
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*.
gi 1802566923 373 INLIGELFVVMSTFSWSNITIILMGVNMVITALYSLYMLIMTQRGK 418
Cdd:PRK07363  389 VGFVAEFIVFQGSFSTFPIPTLLCIVASGLTAVYFVILLNRTCFGR 434
PRK08375 PRK08375
putative monovalent cation/H+ antiporter subunit D; Reviewed
104-395 3.66e-24

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236251 [Multi-domain]  Cd Length: 487  Bit Score: 104.58  E-value: 3.66e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 104 LFLIMTFTAM------ELILFYILFEATLVPTLIIITRWGNQtERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFL 177
Cdd:PRK08375  111 LFLLLLAGLLgalltaDLFNLFVFLEIMSLSSYALVAMGGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMA 189
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 178 MLQYWVQPVHNswsnVFMWLA-CMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPMTDF 256
Cdd:PRK08375  190 DLAGALAENPT----VVTAFGfVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFR 265
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 257 ----MAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANS 332
Cdd:PRK08375  266 falgLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGA 345
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1802566923 333 NYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFS---WSNITIIL 395
Cdd:PRK08375  346 IEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKWYLVVGAVEagqWLVLAVLL 411
Oxidored_q5_N pfam01059
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
1-109 8.66e-24

NADH-ubiquinone oxidoreductase chain 4, amino terminus;


Pssm-ID: 366442 [Multi-domain]  Cd Length: 110  Bit Score: 95.67  E-value: 8.66e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923   1 MLKYIIPTIMLMPLTWLSKNSMIWVNSTAHSLLISFTSLLLMNQFGDNSLNF-SLVFFSDSLSTPLLILTMWLLPLMLMA 79
Cdd:pfam01059   1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNlSYFLGIDSLSYPLIILSCWLLPLMILA 80
                          90       100       110
                  ....*....|....*....|....*....|
gi 1802566923  80 SQHHLSKENLTRKKLFITMLISLQLFLIMT 109
Cdd:pfam01059  81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
PRK12667 PRK12667
putative monovalent cation/H+ antiporter subunit D; Reviewed
52-408 1.91e-21

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237167 [Multi-domain]  Cd Length: 520  Bit Score: 96.96  E-value: 1.91e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  52 FSLVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLtrKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLI 131
Cdd:PRK12667   74 IGIVYEVDLLGALLGLLTALVMFLILIYSYWYLEHESG--PEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYG 151
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 132 IITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLML-----QYWVQPVHNSWSNVFMWLACMMA---- 202
Cdd:PRK12667  152 LVAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMADLsakirGLSFPLTGGLAGNPPLALGVALAlalw 231
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 203 -FMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRI-------TLILNPMTDFMAYPFIMLSLWGMIMTSS 274
Cdd:PRK12667  232 aFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFlytifgiSPSLIDFRAALSPILIILGAVSAIIGAL 311
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 275 ICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPL 354
Cdd:PRK12667  312 MMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPI 391
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1802566923 355 MATWWLLASLTNLALPPTINLIGELFVVMSTFSWSnitIILMGVNMVITALYSL 408
Cdd:PRK12667  392 ASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESG---FYLPALVLLIASAISL 442
PRK06458 PRK06458
hydrogenase 4 subunit F; Validated
206-405 3.38e-20

hydrogenase 4 subunit F; Validated


Pssm-ID: 235805 [Multi-domain]  Cd Length: 490  Bit Score: 93.07  E-value: 3.38e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 206 KMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLIL--NPMTDFMAYPFIMLSLWGMIMTSSICLRQTDLK 283
Cdd:PRK06458  227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIdaAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIK 306
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 284 SLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLAS 363
Cdd:PRK06458  307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 1802566923 364 LTNLALPPTINLIGELFVVMSTFS---WSNITIILMGVNMVITAL 405
Cdd:PRK06458  387 LAIAGMPPFGVFISEFLILTAGLArgpLLIAILLLLLLTLAFAAL 431
ND4 MTH00062
NADH dehydrogenase subunit 4; Provisional
31-395 1.10e-18

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214413 [Multi-domain]  Cd Length: 417  Bit Score: 87.67  E-value: 1.10e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  31 SLLISFTSLLLMNQFGDNSLNFSLVFFS----DSLSTPLLILTMWLLPLMLMASQHHLSkeNLTRKKLFITMLislqlFL 106
Cdd:MTH00062   12 FLLLLLFCLLYSSGVGCCILVVNNVFNGlfifDSLSFYLILLVLFLGLYSQVMFYNLLS--GVSRFFLFLSLI-----FS 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 107 IMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQYwvqpv 186
Cdd:MTH00062   85 ILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGS----- 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 187 HNSWSNVFMWLACMMaFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPMTdFMAYPFIMLSL 266
Cdd:MTH00062  160 DDSVSLIVYYVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGS-FLGYLFLCCLF 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 267 WGMIMTSSicLRQTDLKSLIAYSSVSHMaLVIVAILIQTPWSYMGATALM-IAHGLTSSMLFCLANSNYERIHSRTMILA 345
Cdd:MTH00062  238 SVFFLITA--CSELDGKRWLAFLSLSHI-LVPVLGLFVGDWSSINLSFFYcLGHGLSAGLVFLLLWCFYEVSGSRNWVLL 314
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 1802566923 346 RGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIIL 395
Cdd:MTH00062  315 KSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFW 364
PRK08668 PRK08668
NADH dehydrogenase subunit M; Validated
110-327 2.42e-15

NADH dehydrogenase subunit M; Validated


Pssm-ID: 236332 [Multi-domain]  Cd Length: 610  Bit Score: 78.50  E-value: 2.42e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 110 FTAMELILFYILFEATLVPTLIIITRwGNQTERLNAGLYFLFYTLaGSLPLLVALIYIQNTVGSLNFL-MLQYWVQPVHN 188
Cdd:PRK08668  115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVLSAI-GAYAMLYAIFLIYAKTGTFDFAdISQGLINDTST 192
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 189 SWSnVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGM------LRITLILNPMTDFM----- 257
Cdd:PRK08668  193 GFA-LIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFllvlyvLPGTKLFSEFGTYRgvplf 271
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 258 AYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLF 327
Cdd:PRK08668  272 NYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFF 341
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
115-418 3.24e-14

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 74.80  E-value: 3.24e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 115 LILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQYWVQPVHNSWsnvF 194
Cdd:COG1009   133 LLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELLAAAPTILSSP---L 209
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 195 MWLACMMAF---MVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMLRITLILNpMTDFMAYPFIMLSLWGMI 270
Cdd:COG1009   210 LTLILLLLLlgaFGKSAQFPLHFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLSPLFA-LSPVWLTVVAIIGAITAL 287
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 271 MTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQT 350
Cdd:COG1009   288 FAALIALAQTDIKRVLAYSTVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRK 364
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1802566923 351 LLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGVNMV---ITALYSLYMLIMTQRGK 418
Cdd:COG1009   365 KMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLVFFGK 435
PRK08676 PRK08676
hydrogenase membrane subunit; Validated
80-384 1.45e-13

hydrogenase membrane subunit; Validated


Pssm-ID: 181537 [Multi-domain]  Cd Length: 485  Bit Score: 72.48  E-value: 1.45e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  80 SQHHLSKENLtrkKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWgNQTERLNAGLYFLFYTLAGSLP 159
Cdd:PRK08676   92 SNGELDPENL---KVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAIL-SARENIDAALKYIFIASTAMIF 167
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 160 LLVALIYI------QNTVGSLNFLMLQYWVqPVHNSWSNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAA 233
Cdd:PRK08676  168 AFIGLIFLfsltrqALGTGTLNWTELAAHA-SLLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSG 246
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 234 VLLKLGGYGMLRITLILNPMTDFMAYPFIMLSLwGMIMTSSIC---LRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYM 310
Cdd:PRK08676  247 TVLNIGIYGILRLSALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALF 325
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1802566923 311 GATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMS 384
Cdd:PRK08676  326 WMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQ 399
PRK12646 PRK12646
DUF4040 family protein;
66-419 1.75e-13

DUF4040 family protein;


Pssm-ID: 183646 [Multi-domain]  Cd Length: 800  Bit Score: 72.87  E-value: 1.75e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  66 LILTMWLLPLMLMASQHhLSKE--NLTRkklFITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERL 143
Cdd:PRK12646   85 LIISLIGIAVFFYATQY-LSSRkdNLPR---FYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLISYWYNNGDSQ 160
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 144 NAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQYWVQPVHNSWSNVFMWLACMMAFMVKMPLYGLHLWLPKAhVEA 223
Cdd:PRK12646  161 FGAIQSFMITVFGGLALLVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHIWLPRA-MAA 239
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 224 PIAGSMVL-AAVLLKLGGYGMLRITLILNpMTDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAI- 301
Cdd:PRK12646  240 PTPVSAYLhSATMVKAGIFLLFRFTPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVg 318
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 302 ----LIQTPWSYMGATALMIA---------HGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTnLA 368
Cdd:PRK12646  319 igggYAQHQQDAIASIYVFVLfaalfhlmnHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALS-MA 397
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1802566923 369 LPPTIN--LIGELFV--VMSTFSWSNITIILMGVNMVI-------TALYSLYMLIMTQRGKY 419
Cdd:PRK12646  398 GVPFLNgfLSKEMFLdaLTQTGQLSQFSLISMIIIVFIgviasifTFTYALYMVKEVFWGKY 459
PRK08667 PRK08667
hydrogenase membrane subunit; Validated
21-386 2.30e-13

hydrogenase membrane subunit; Validated


Pssm-ID: 236331 [Multi-domain]  Cd Length: 644  Bit Score: 72.07  E-value: 2.30e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  21 SMIWVNSTAHSLLISFTSLLLMNQFGDNSL-----NFSLVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLF 95
Cdd:PRK08667   33 SVLWLVIAIALLLFAGSLQLFTGNPLDIPLwgiapGLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANL 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  96 ITMLISLQLF-LIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSL 174
Cdd:PRK08667  113 LSALTALFILsMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSF 192
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 175 NFLMLQYwvqpvhNSWSNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRItlILNPMT 254
Cdd:PRK08667  193 ELSPLGA------SAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRF--LMDVLS 264
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 255 DFMAYPFIMLSLwGMI---MTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALM-----------IAHG 320
Cdd:PRK08667  265 PELWWGVLILLA-GSIsalLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHA 343
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1802566923 321 LTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTF 386
Cdd:PRK08667  344 LFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
PRK12650 PRK12650
DUF4040 family protein;
42-407 5.09e-13

DUF4040 family protein;


Pssm-ID: 237158 [Multi-domain]  Cd Length: 962  Bit Score: 71.23  E-value: 5.09e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  42 MNQFGDNSLNFSLVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKEnlTRKKLFITMLISLQLFLIMTFTAMELILFYIL 121
Cdd:PRK12650   61 IPDLLGNGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRK--KGNTSFYLLMTAFMAAMLLLVLADDVVVLFVA 138
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 122 FEATLVPTLIIITRWGNQTErlNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNF---LMLQYWVQpvHNSWSNVFMWLA 198
Cdd:PRK12650  139 WELVSLASFFLIARSGSGGE--AGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLsgiLHSDVWAE--KPGLTTVVAVLI 214
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 199 CMMAFmVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLIlnpMTDFMAYPfIMLSLWGM---IMTSSI 275
Cdd:PRK12650  215 AVAAF-TKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPV---FHDVAVWN-WLLIIVGMitaLMGAVF 289
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 276 CLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLM 355
Cdd:PRK12650  290 AVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGSLWRRMPFT 369
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1802566923 356 ATWWLLASLTNLALPPTINLIGE--LFVVMSTFSWSNITIILMGVNMVITALYS 407
Cdd:PRK12650  370 FVSVTIAALSMAAVPPLFGFVSKegMLTAFLEAPGGNAGVVLLLVGAALGAVFT 423
PRK07234 PRK07234
putative monovalent cation/H+ antiporter subunit D; Reviewed
51-403 5.38e-13

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235978 [Multi-domain]  Cd Length: 470  Bit Score: 70.75  E-value: 5.38e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  51 NFSLVFFSDSLSTPLLILTmwllPLMLMASQHHLSKENLTRkkLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTL 130
Cdd:PRK07234   58 NFGVTLRADALSGYFILTN----ALVTLAVIFYCWESAKTR--FFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATF 131
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 131 IIITrWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQywvqpvhNSWSNVFMWLAcmMAFMVKMPLY 210
Cdd:PRK07234  132 LLVA-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLA-------TADPEAFALIA--LGLLVKGGIF 201
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 211 GLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPMTDFMAYPFIMLSLWGmimtSSICLRQTDLKSLIAYSS 290
Cdd:PRK07234  202 VSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLG----VLFALLEKDLKRMLAFST 277
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 291 VSHMALVIVAILIqtpwsymgATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLmatwwLLASLTNLALP 370
Cdd:PRK07234  278 ISQLGFILAAPLV--------GGLYALAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIPL-----TMASFSIAGFP 344
                         330       340       350
                  ....*....|....*....|....*....|...
gi 1802566923 371 PTINLIGELFVVMSTFSWSNITIILMGVNMVIT 403
Cdd:PRK07234  345 LLAGFVSKVLTLKNLLPWQAIALNLAAVGTAAS 377
PRK07691 PRK07691
putative monovalent cation/H+ antiporter subunit D; Reviewed
5-408 1.89e-12

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 181085 [Multi-domain]  Cd Length: 496  Bit Score: 68.82  E-value: 1.89e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923   5 IIPTIMLMPLTWLSKNSMIW-VNSTAHSLLISFTSLLLMN----------QFGDNSLNFSLVFFSDSLSTPLLILTMWLL 73
Cdd:PRK07691   11 LIPVITAILLIFLGKRPIIQrYVALIGSLLTLVAAIILVAnvykhgiqtlELGNWKAPFGIVFVADMFAALLVLTSSIIT 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  74 PLMLMASQHHLSKEnltRKKLFITMLISLQLF-LIMTFTAMELILFYILFEATLVPTLIIITRWGNQTErLNAGLYFLFY 152
Cdd:PRK07691   91 FLVILYSFQTIGIE---RERYYYYPSVLFMLAgVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGGTKIQ-LRESIKYVLI 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 153 TLAGSLPLLVALIYIQNTVGSLNFLMLQYWVQPVHNSWSNVFMWLAC--MMAFMVKMPLYGLHLWLPKAHVEAPIAGSMV 230
Cdd:PRK07691  167 NVVSSAFFVVAVAILYSVVGTLNMADISVKIAELSAGQTGLITVVAIlfLFVFATKAGLFPLYFWLPGSYYAPPIAIAAL 246
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 231 LAAVLLKLGGYGMLRI-TLILNPMTDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSY 309
Cdd:PRK07691  247 FGALLTKVGVYAIARTfTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGM 326
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 310 MGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWS 389
Cdd:PRK07691  327 IGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGTFEAG 406
                         410
                  ....*....|....*....
gi 1802566923 390 NITIILMGVNMVITALYSL 408
Cdd:PRK07691  407 FYVSGIIVLLSSLLVLYSV 425
PRK12647 PRK12647
putative monovalent cation/H+ antiporter subunit A; Reviewed
49-396 2.47e-12

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237156 [Multi-domain]  Cd Length: 761  Bit Score: 69.18  E-value: 2.47e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  49 SLNFSLVFFSDSLS-TPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLISLQLFLIMtftAMELILFYILFEATLV 127
Cdd:PRK12647   53 SLGVNLSFLLDGLSlTFALLITGIGTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVL---SDNLITLFVFWELTSI 129
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 128 PTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQYWVQPVHNSWSNVFMWLACMMAFMVKM 207
Cdd:PRK12647  130 TSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLASGDVIREHPLYLAILLLVLGGAFTKS 209
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 208 PLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMLRitliLNPMTDFMAYPFIMLSLWG---MIMTSSICLRQTDLK 283
Cdd:PRK12647  210 AQFPFHFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGgltMLTGALLAVRQTDLK 284
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 284 SLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLAS 363
Cdd:PRK12647  285 LILAYSTVSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAA 364
                         330       340       350
                  ....*....|....*....|....*....|....*.
gi 1802566923 364 LTNLALPPTINLIGELFVVMSTF---SWSNITIILM 396
Cdd:PRK12647  365 LSMAGLPPLFGFLAKELIYEALLeapLWSLILTVAA 400
PRK12665 PRK12665
putative monovalent cation/H+ antiporter subunit D; Reviewed
108-379 1.60e-11

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237165 [Multi-domain]  Cd Length: 521  Bit Score: 66.15  E-value: 1.60e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 108 MTFTAMELILFYILFEATLVPTLIIITRwGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQYWVQPVh 187
Cdd:PRK12665  126 NAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMADLAVRLDEL- 203
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 188 NSWSNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPmTDFMAYPFIMLSLW 267
Cdd:PRK12665  204 PSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP-GGGLDTLLMVVALL 282
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 268 GMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFcLANSNYERiHSRTMILAR- 346
Cdd:PRK12665  283 TMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLF-LVVGLIER-QAGSSSLRRl 360
                         250       260       270
                  ....*....|....*....|....*....|....*
gi 1802566923 347 -GLQTLLPLMATWWLLASLtNLA-LPPTINLIGEL 379
Cdd:PRK12665  361 gGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKV 394
PRK06521 PRK06521
hydrogenase 4 subunit B; Validated
117-371 1.76e-11

hydrogenase 4 subunit B; Validated


Pssm-ID: 235820 [Multi-domain]  Cd Length: 667  Bit Score: 66.45  E-value: 1.76e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 117 LFYILFEA-TLVPTLIIITrwgNQTERLN--AGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQywVQPVHNSWSNV 193
Cdd:PRK06521  137 SFLVAWETmSLSSWFLVIA---NHREAEIrrAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMR--AAHLSPFWASL 211
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 194 FMWLAcMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPMTD-FMAYPFIMLSLWGMIMT 272
Cdd:PRK06521  212 VFLLA-LFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLGAPGwWWGVLVLALGAISAVLG 290
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 273 SSICLRQTDLKSLIAYSSVSHMALVIVA-----ILIQTPWSYMGATALMIA------HGLTSSMLFCLANSNYERIHSRT 341
Cdd:PRK06521  291 VLYALAEHDLKRLLAYSTIENIGIIFVGlglamVFIAYGMPLLAALALTAAlyhllnHALFKSLLFLGAGAVLHATGTRD 370
                         250       260       270
                  ....*....|....*....|....*....|
gi 1802566923 342 MILARGLQTLLPLMATWWLLASLTNLALPP 371
Cdd:PRK06521  371 MEKLGGLIRRMPWTAWAFLIGCLAISALPP 400
PRK06589 PRK06589
putative monovalent cation/H+ antiporter subunit D; Reviewed
51-411 2.58e-11

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235835 [Multi-domain]  Cd Length: 489  Bit Score: 65.61  E-value: 2.58e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  51 NFSLVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTRKKLFITMLISLQLFLIMTFTAMELILFYILFEATLVPTL 130
Cdd:PRK06589   74 NYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTISTA 153
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 131 IIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFlmlqywVQPVHNSWSNVFMWLACMMAFMVKMPLY 210
Cdd:PRK06589  154 FLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDF------VSGGLFSKNQSIILLLMFIYGIAKTAIF 227
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 211 GLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLI---LNPMTDF--MAYPFIMLSLWGMIMTSSICLRQTDLKSL 285
Cdd:PRK06589  228 PVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifgLSYLQRIfaEFNWLIFIPIVSIFYSSLKALKTDNIKKI 307
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 286 IAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLT 365
Cdd:PRK06589  308 LAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSLS 387
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*...
gi 1802566923 366 NLALPPTINLIGELFVVMSTFSWSNIT--IILMGVNMVITALYSLYML 411
Cdd:PRK06589  388 LIGIPIFSGFISKFLILLAASEQNQPWlsIIVMLVVIASSILSALYLL 435
PRK08377 PRK08377
NADH dehydrogenase subunit N; Validated
162-417 4.54e-11

NADH dehydrogenase subunit N; Validated


Pssm-ID: 181406 [Multi-domain]  Cd Length: 494  Bit Score: 64.79  E-value: 4.54e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 162 VALIYIQntVGSLNFLMLQYWVQPVHNSWSNVFMWLaCMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 241
Cdd:PRK08377  178 VALIYGA--TGTLNMAHIAQLAGTIDPTVAQVGLAL-LIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLY 254
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 242 GMLRITLIL---NPMTDFMAYPFIMLSLwGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIA 318
Cdd:PRK08377  255 AMARILYLMqnaNGWSSVLKLVIIMATL-TVFFAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMIN 333
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 319 HGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFS--WSNITIILM 396
Cdd:PRK08377  334 HAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRIILAGLSagYTWPVALVL 413
                         250       260
                  ....*....|....*....|.
gi 1802566923 397 GVNMVITALYSLYMLIMTQRG 417
Cdd:PRK08377  414 GASVVEAVYYFRLIHTMWFKG 434
PRK06525 PRK06525
hydrogenase 4 subunit D; Validated
83-407 9.76e-11

hydrogenase 4 subunit D; Validated


Pssm-ID: 180606 [Multi-domain]  Cd Length: 479  Bit Score: 63.45  E-value: 9.76e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  83 HLSKENLTRKKLFITMLISLQLFLIMTFTAMELILFyilFEATLVPTLIIITRWGNQtERLNAGLYFLFYTLAGSLPLLV 162
Cdd:PRK06525  106 HPVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLF---FEITGLCSWALISYYQSP-KALRSALKALLITHIGSLGLYL 181
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 163 ALIYIQNTVGSLNFLMLQYWVQPVhnswsNVFMWLACMMAFMVKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGY 241
Cdd:PRK06525  182 AAATLFLQTGTFALSALSGLHGSL-----KYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVY 255
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 242 GMLRITLILNPMTDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYM---GATALMIA 318
Cdd:PRK06525  256 IFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILGSRLaleGSIAYIFN 335
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 319 HGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITIILMGV 398
Cdd:PRK06525  336 HAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPA 415

                  ....*....
gi 1802566923 399 nMVITALYS 407
Cdd:PRK06525  416 -MVLLLIES 423
NuoN COG1007
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ...
9-408 1.47e-10

NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440631 [Multi-domain]  Cd Length: 473  Bit Score: 62.83  E-value: 1.47e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923   9 IMLMPLTWLSKNSMIWVNSTAHSLLISFTsLLLMNQFGDNSLNFSLVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKEN 88
Cdd:COG1007    20 LLLLDLFLPRRSRRLLAGLALLGLLLALA-LLLLALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRG 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  89 LTRKKLFITMLISLqLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGL-YFLFYTLAGSLPLL-VALIY 166
Cdd:COG1007    99 LLRGEFYALLLFAT-LGMMLMASANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGFLLYgISLLY 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 167 IqnTVGSLNFLMLQYWVQpvHNSWSNVFMWLACMM---AFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM 243
Cdd:COG1007   178 G--ATGSLNLAGIAAALA--AGGANSPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAA 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 244 L-RI-TLILNPMTDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGL 321
Cdd:COG1007   253 LlRLlVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLF 332
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 322 TSSMLFCLANSNYERIHSRTMILA-RGLQTLLPLMAtWWLLASLTNLA-LPPTINLIGELFVVMSTFSWSNITI-ILMGV 398
Cdd:COG1007   333 MNLGAFAVILLLSRKGGEAEEIEDlAGLARRSPLLA-LAMTIFLLSLAgIPPTAGFFGKFYVFSAAVEAGLYWLaVIAVL 411
                         410
                  ....*....|
gi 1802566923 399 NMVITALYSL 408
Cdd:COG1007   412 NSVISAYYYL 421
PRK12662 PRK12662
putative monovalent cation/H+ antiporter subunit D; Reviewed
137-397 1.14e-09

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 183662 [Multi-domain]  Cd Length: 492  Bit Score: 60.13  E-value: 1.14e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 137 GNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQYWVQPVHNSWSNVFMWLACMMAFMVKMPLYGLHLWL 216
Cdd:PRK12662  153 GRDKKALVAAFEYLIIGTIGATFYLIGIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGVLFIMVGLFIKAALFPFHKWL 232
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 217 PKAHVEAPIAGSMVLAAVLLKLGGYGMLRITL-ILNPMTDFMAYPF----IMLSLWGMIMTSSICLRQTDLKSLIAYSSV 291
Cdd:PRK12662  233 IQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYdVFKANFVFTTLPFnnvfMILAALAIVFGSVLAILSKDIKRIFAYSSI 312
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 292 SHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPP 371
Cdd:PRK12662  313 SHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPP 392
                         250       260
                  ....*....|....*....|....*....
gi 1802566923 372 TINLIGELFV---VMSTFSWSNITIILMG 397
Cdd:PRK12662  393 TSGFVAKWYIldaFIKSNAWIGLVVLLVG 421
PRK12668 PRK12668
Na(+)/H(+) antiporter subunit D;
136-327 1.47e-08

Na(+)/H(+) antiporter subunit D;


Pssm-ID: 237168 [Multi-domain]  Cd Length: 581  Bit Score: 56.83  E-value: 1.47e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 136 WGNQTER-LNAGL-YFLFYTLAGSLpLLVALIYIQNTVGSLNFLMlqywvqpvHNSWSNVFMWLAcMMAFMVKMPLYGLH 213
Cdd:PRK12668  134 WARGTKAaVRAGFrYLLVHVLGGVL-LLAGILLHYAETGSFAFGA--------IAGLGGTAAWLI-LIGFGVNAAFPPLH 203
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 214 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRI---TLILNPMTDFMA-YPFIMLSLwgmimtssiclrQTDLKSLIAYS 289
Cdd:PRK12668  204 AWLPDAYPEATVTGSVFLSAFTTKTAVYALARAfpgTELLIYIGAAMAvYGVFFALL------------ENDLRRLLSYH 271
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 1802566923 290 SVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLF 327
Cdd:PRK12668  272 IVSQVGYMVAGIGIGTALAINGAVAHAFNHILYKGLLF 309
PRK08376 PRK08376
putative monovalent cation/H+ antiporter subunit D; Reviewed
37-406 7.24e-08

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236252 [Multi-domain]  Cd Length: 521  Bit Score: 54.72  E-value: 7.24e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  37 TSLLLMNQFGDNSLNFSLVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKEnlTRKKLFITMLISLQLFLIMTFTAMELI 116
Cdd:PRK08376   67 ESPTLTLPFGSGGFPIRIIWEVDLFGAFMALIATIVSFLAVLYSISYMKHD--TGLDKYYTLILLLELGMLGMAITGDLF 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 117 LFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFY-TLAGSLPLL-VALIYIQntVGSLNFLMLQYWVQPVHNSWSNVF 194
Cdd:PRK08376  145 NFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVgSLASSMVLLgIALLYGQ--YGTLNMAYLAVKMSENPTVVAKIA 222
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 195 MWLAcMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLaaVLLKLGG-YGMLRITL-ILNPMTDFMAYPFIM--LSLWGMI 270
Cdd:PRK08376  223 LALF-IAGLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFsIYGPAINLATVGWVIiiLGCLTMF 299
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 271 MTSSICLRQTDLKSLIAYSSVS---HMAL---VIVAILIQTPWSYMGATAL------MIAHGLTSSMLFCLANSNYERIH 338
Cdd:PRK08376  300 VGVAMAVVQKDVKRLLAYHSVSqigYMLLglgVGLAALGDPAMASYGEIALaggiyhIVNHALYKALLFLTAGAVIYETG 379
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1802566923 339 SRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNI-TIILMGVNMVITALY 406
Cdd:PRK08376  380 TRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPIlGVIAMIGSVLTLASF 448
PRK12644 PRK12644
putative monovalent cation/H+ antiporter subunit A; Reviewed
111-327 1.01e-07

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237154 [Multi-domain]  Cd Length: 965  Bit Score: 54.54  E-value: 1.01e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 111 TAMELILFYILFEATLVPTLIIItrwGNQTERLN---AGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLqywvqpVH 187
Cdd:PRK12644  124 TSDNLLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSEL------LA 194
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 188 NSWSN--VFMWLACMMAFMV-KMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMLRITlilnpmTDFMAYPF-- 261
Cdd:PRK12644  195 DPPTGpaVSVAVVLILVGALsKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLA------PGFADVPVwr 267
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1802566923 262 ---IMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLF 327
Cdd:PRK12644  268 ptvLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALF 336
ND5 MTH00032
NADH dehydrogenase subunit 5; Provisional
59-393 2.46e-07

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214407 [Multi-domain]  Cd Length: 669  Bit Score: 53.04  E-value: 2.46e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  59 DSLSTPLLILTMWLLPLMLMASQHHLSKE-NLTRKKLFITMLISLQLFLIMTFTAMELilfYILFEATLVPTLIIITRWG 137
Cdd:MTH00032   79 DTLSVTMLLVISSISTLVHIYSTSYMSDDpHVPRFLCYLSLFTFLMMVLVTSDNYLQL---FIGWEGVGVCSYLLVAFWT 155
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 138 NQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQ-------------YWVQPVHNSWSN-VFMWLACMMAF 203
Cdd:MTH00032  156 TRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFNggsvgsgimdrgyYGGGAYESPLAPfAIIGILLLIGC 235
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 204 MVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITlilnPMTDFMAYPFIMLSLWGMI---MTSSICLRQT 280
Cdd:MTH00032  236 IGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEKAPLTLLIITIFGALtafFAATVGLVQN 311
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 281 DLKSLIAYSSVSHMALVIVAILIQTpwSYMGATALMIAHGLTSSMLFCLANS-----NYERIHSRTMilaRGLQTLLPLM 355
Cdd:MTH00032  312 DLKKVIAYSTCSQLGYMVLIIGIEG--SHNVGLFHLVNHAFFKALLFLSAGSvihstTVDEQDMRKM---GGLIHSIPFT 386
                         330       340       350
                  ....*....|....*....|....*....|....*...
gi 1802566923 356 ATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITI 393
Cdd:MTH00032  387 YTMMLIGSFSIMGLPYLTGFYSKDLILELTYSGRNMGI 424
PRK05777 PRK05777
NADH-quinone oxidoreductase subunit NuoN;
18-408 4.51e-07

NADH-quinone oxidoreductase subunit NuoN;


Pssm-ID: 235603 [Multi-domain]  Cd Length: 476  Bit Score: 52.13  E-value: 4.51e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  18 SKNSMIWVNSTAHSLLISFTSLLLMNQFGDNSLNFSLVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKENLTrkKLFIT 97
Cdd:PRK05777   31 VRRHSRRATLAVLALLLALVALLFVLGAAGGGTAFGGMLVVDGFALFLKGLILLASLLALLLARPYLEDRGRG--EFYLL 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  98 MLISLQLFLIMTFtAMELILFYILFEATLVPTLIIITRWGNQTERLNAGL-YFLFYTLAGSLPLL-VALIYIQntVGSLN 175
Cdd:PRK05777  109 VLFALLGMMVMVS-ANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIkYFVLGALASGFLLYgMSLLYGA--TGSLS 185
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 176 FL-MLQYWVQPVHNSWSNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM-LRI-TLILNP 252
Cdd:PRK05777  186 FAgIAKALADGSGNSLLLLFGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLlVVAFGG 264
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 253 MTDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTS----SMLFC 328
Cdd:PRK05777  265 LSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTlgafGVISL 344
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 329 LANSNYERIHSRTMilaRGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMSTFSWSNITI-ILMGVNMVITALYS 407
Cdd:PRK05777  345 LRRKGGEAESISDF---AGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLaVIGVLNSAIGAFYY 421

                  .
gi 1802566923 408 L 408
Cdd:PRK05777  422 L 422
PRK12663 PRK12663
Na+/H+ antiporter subunit D;
44-382 4.80e-07

Na+/H+ antiporter subunit D;


Pssm-ID: 237163 [Multi-domain]  Cd Length: 497  Bit Score: 51.87  E-value: 4.80e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  44 QFGDNSLNFSLVFFSDSLSTpLLILTMWLLPLMLMAsqHHLSK-ENLTRKKLFITMLISLQLFLIMTFTAMELILFYILF 122
Cdd:PRK12663   61 DFGGWLPPFGIQFTGDSLSA-LMVTTASFVATAIMA--YGFGDiEHSGRRYGFPPFILLLMAGVIGSFLTGDLFNLYVWF 137
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 123 EATLVPTLIIITrWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQYWVQPVHNSWSNVFMWLACMMA 202
Cdd:PRK12663  138 EVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMRLNDMGDTATLTTIALLFLLA 216
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 203 FMVKMPLYGLHlWLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRI-TLILNPMTDFMAYPFIMLSLWGMIMTSSICLRQTD 281
Cdd:PRK12663  217 FGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVfTLLFPQERELLHPLLATMAAITMVIGALGALAYKD 295
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 282 LKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLL 361
Cdd:PRK12663  296 IRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLI 375
                         330       340
                  ....*....|....*....|.
gi 1802566923 362 ASLTNLALPPTINLIGELFVV 382
Cdd:PRK12663  376 LIFAIGGLPPFSGFWGKVLLV 396
PRK08042 PRK08042
formate hydrogenlyase subunit 3; Reviewed
156-390 1.00e-06

formate hydrogenlyase subunit 3; Reviewed


Pssm-ID: 181206 [Multi-domain]  Cd Length: 593  Bit Score: 50.98  E-value: 1.00e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 156 GSLPLLVALIYIQNTVGSLNFLMLQYWVQPVHnswSNVFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVL 235
Cdd:PRK08042  146 GTLLLAIACWLLWQRYGTLDLRLLDMRMQQLP---LGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVV 222
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 236 LKLGGYGMLRITLILNPMTDFMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALV-------IVAILIQTP-- 306
Cdd:PRK08042  223 MKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgagVTGIALEQPal 302
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 307 --WSYMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVVMS 384
Cdd:PRK08042  303 iaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQS 382

                  ....*.
gi 1802566923 385 TFSWSN 390
Cdd:PRK08042  383 FFKLSN 388
PRK12649 PRK12649
putative monovalent cation/H+ antiporter subunit A; Reviewed
49-295 2.26e-05

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 183649 [Multi-domain]  Cd Length: 789  Bit Score: 46.75  E-value: 2.26e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  49 SLNFSLVFFSDSLSTPLLILTMWLLPLMLMASQHHLS-KENLTRkkLFITMLISLQLFLIMTFTAMELILFyILFEATLV 127
Cdd:PRK12649   69 SAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMShKEDLPR--YYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSI 145
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 128 PTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQYWVQPVHNSWSNVFMWLACMMAFM--- 204
Cdd:PRK12649  146 TSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIgaa 225
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 205 VKMPLYGLHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMLRITLILNPMTDFmaypFIMLSLWGMI---MTSSICLRQT 280
Cdd:PRK12649  226 AKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHPIFSGTEAW----FILVSGTGMItmvLAGFLAFRQT 300
                         250
                  ....*....|....*
gi 1802566923 281 DLKSLIAYSSVSHMA 295
Cdd:PRK12649  301 DIKAILAYSTISQLA 315
ND5 MTH00208
NADH dehydrogenase subunit 5; Provisional
20-307 2.96e-05

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177251 [Multi-domain]  Cd Length: 628  Bit Score: 46.50  E-value: 2.96e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  20 NSMIWVNSTAHSLLISFTslllmNQFGDNSLNFSLVFFSDSLStpLLILTMWLLPLMLMASQHHLSKENLTRKKLFITML 99
Cdd:MTH00208   72 NLLIWILLGCPNINISLS-----NWLSNTLFNFSLSFIFDFYF--ILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLL 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 100 ISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLML 179
Cdd:MTH00208  145 IIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEI 224
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 180 QYWVQPvhNSWSNVFMWLACMMAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MVLAAVLLklggygMLRITLILNP 252
Cdd:MTH00208  225 LSLNNS--NSFLINILLFGILLAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIRTSPLISN 295
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1802566923 253 MTDFMAYPFIMLSLWGmIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPW 307
Cdd:MTH00208  296 SPWFLSLCLILGSLTA-LFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPN 349
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
95-370 5.12e-05

NADH dehydrogenase subunit 5; Reviewed


Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 45.84  E-value: 5.12e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  95 FITMLISLQLFLIMTFTAMELILFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSL 174
Cdd:MTH00020  113 FMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSL 192
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 175 NFLMLqYWVQPVHNSWSNVFMWLACMMAFMVKMPLYGLHLWLPKAH-----VEAPI-AGSMVLAAVLLklggygMLRITl 248
Cdd:MTH00020  193 DFSSV-FNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMegptpVSALIhAATMVTAGVFL------LIRSS- 264
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 249 ilnPMTDFMAYPFIMLSLWGMI---MTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQtpwSYMGATALMIAHGLTSSM 325
Cdd:MTH00020  265 ---PLFEQAPLALIIVTIVGSLtvfFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLS---HYSISLFHLMNHAFFKAL 338
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 1802566923 326 LFCLANSnyeRIHS----RTMILARGLQTLLPLMATWWLLASLTNLALP 370
Cdd:MTH00020  339 LFLSAGS---VIHAlsdeQDMRKMGGLISFLPLTYIFFLIGSLSLMGFP 384
ND5 MTH00211
NADH dehydrogenase subunit 5; Provisional
37-301 1.16e-04

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214459 [Multi-domain]  Cd Length: 597  Bit Score: 44.56  E-value: 1.16e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923  37 TSLLLMNQFGDNSLNFSLVFFSDSLSTPLLILTMWLLPLMLMASQHHLSKEnlTRKKLFITMLISLQLFLIMTFTAMELI 116
Cdd:MTH00211   56 TILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSE--PNINRFFKYLLLFLIFMLILVSANNLF 133
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 117 LFYILFEATLVPTLIIITRWGNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLmlqywvQPVHNSWSNVFMW 196
Cdd:MTH00211  134 QLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLNSWEIS------QLFILNLDLTLFL 207
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 197 LACMMAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MVLAAVLLklggygMLRitliLNPMTDFMAYPFIMLSLWG- 268
Cdd:MTH00211  208 LGLLLAAMGKSAQFGFHPWLPSA-MEGPTPVSallhsstMVVAGVFL------LIR----LSPLFQNNQLILGAVLLLGa 276
                         250       260       270
                  ....*....|....*....|....*....|....*
gi 1802566923 269 --MIMTSSICLRQTDLKSLIAYSSVSHMALVIVAI 301
Cdd:MTH00211  277 ltMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTL 311
PRK12666 PRK12666
putative monovalent cation/H+ antiporter subunit D; Reviewed
137-382 1.30e-04

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237166 [Multi-domain]  Cd Length: 528  Bit Score: 44.46  E-value: 1.30e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 137 GNQTERLNAGLYFLFYTLAGSLPLLVALIYIQNTVGSLNFLMLQYWVQPVHNSWSNVFMWLACMM--AFMVKMPLYGLHL 214
Cdd:PRK12666  152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIAQLPAADRALLEAGAALLlvVFLIKAAMWPLNF 231
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 215 WLPKAHVEA--PIAGsmvLAAVLLKLGGYGMLRI-TLILNPMTDFMAYPFIMLSLWGMIMTSSI----CLRQTDLKSLIA 287
Cdd:PRK12666  232 WLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLsTLLFGPEAGASAGFGQDWLLPGGLATLAFgaigVLAAQRLRRLAA 308
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 288 YSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLAnsnyERIHSRTMILARGLQTLLPLMATWWLLASLTNL 367
Cdd:PRK12666  309 YLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLA----DLVERQRGAAADRLAVTPELYDLDEEEEEEVGV 384
                         250
                  ....*....|....*
gi 1802566923 368 ALPPTINLIGELFVV 382
Cdd:PRK12666  385 AIPATMALLGLLFFI 399
ND2 MTH00196
NADH dehydrogenase subunit 2; Provisional
115-384 3.28e-04

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214453 [Multi-domain]  Cd Length: 365  Bit Score: 42.71  E-value: 3.28e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 115 LILFYILFEATLVPTLIIITRWGNQTERLNAGL-YFLFYTLAGSLPLL-VALIYIQNTVGSLNFLMLQYWVQPVHNSWSN 192
Cdd:MTH00196   15 WLSVYLAIELQTLSLFILIAQNRGSGYSAEAGLkYFVLGALSSGLFLFgCALLCGTTGGLHLSYINLVLNSGQSFSSVSV 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 193 VFMWLACMMAFMVKMPLYGLHLWLPKAHVEAPiagsMVLAAVLLKLGGYGMLRITLILNPMTDFmaypFIMLSLWGMIMT 272
Cdd:MTH00196   95 PIGYLLIIVALLFKLSVAPFHMWAPDVYEGAP----TKTTALLAIVPKLGIFSILVSIGLNVNI----LLIGGLFSLFVG 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 273 SSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFC--LANSNYERIhsrtMILARGLQT 350
Cdd:MTH00196  167 AIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSiiLALNVYKNL----IIEFSGLSR 242
                         250       260       270
                  ....*....|....*....|....*....|....
gi 1802566923 351 LLPLMATWWLLASLTNLALPPTINLIGELFVVMS 384
Cdd:MTH00196  243 RLPILAITLALTFLSIAGIPPLVGFLGKWLILLS 276
PRK06277 PRK06277
energy conserving hydrogenase EhbF;
262-371 1.26e-03

energy conserving hydrogenase EhbF;


Pssm-ID: 235767 [Multi-domain]  Cd Length: 478  Bit Score: 41.17  E-value: 1.26e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 262 IMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERIHSRT 341
Cdd:PRK06277  270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
                          90       100       110
                  ....*....|....*....|....*....|
gi 1802566923 342 MILARGLQTLLPLMATWWLLASLTNLALPP 371
Cdd:PRK06277  350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPP 379
PRK07376 PRK07376
NADH-quinone oxidoreductase subunit L;
196-371 3.91e-03

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236005 [Multi-domain]  Cd Length: 673  Bit Score: 39.62  E-value: 3.91e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 196 WLACMMAFMV------KMPLYGLHLWLPKAhVEAPI-------AGSMVLAAVLLklggygMLRitliLNPMtdFMAYPFI 262
Cdd:PRK07376  224 WLALLLCILVflgpmaKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGVFL------VAR----MYPV--FEQFPAV 290
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 263 MLSL-WGMIMTS----SICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSymGATALMiAHGLTSSMLFCLANS----- 332
Cdd:PRK07376  291 MTVIaWTGAITAflgaSIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSA--GLFHLM-THAYFKAMLFLGSGSvihgm 367
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1802566923 333 ----NYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPP 371
Cdd:PRK07376  368 eevvGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPP 410
PRK06459 PRK06459
hydrogenase 4 subunit B; Validated
201-403 7.75e-03

hydrogenase 4 subunit B; Validated


Pssm-ID: 235806 [Multi-domain]  Cd Length: 585  Bit Score: 38.62  E-value: 7.75e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 201 MAFMVKMPLYGLHL--WLPKAHVEAPIAGSMVLAAVLLKLGGYGMLRITLILNPMTDFMAYPFIMLSLWGMIMTSSICLR 278
Cdd:PRK06459  166 FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILKMTILTQTIPIGYFGLTILAIGAFSILFGALYAY 245
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1802566923 279 QTD-LKSLIAYSSVSHMALVIVAI--------LIQTPWSYMGATALM--IAHGLTSSMLFCLANSnyerIHSRTMILARG 347
Cdd:PRK06459  246 VSEnVKGLLAFSTIENNGAILVALglymvtkqLITSIEHFSLITVILysFAHSVAKTGLFLSSGL----QEKQSITYSKK 321
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1802566923 348 LQTLLPLMATWWLLASLTnlALPPTINLIGELFVVMSTFSWSNITIILMGVNMVIT 403
Cdd:PRK06459  322 IRNRWIELGLTLLASSLS--GLLPNIGGVASWLLLESLFMFAYVLHNVISILFIVT 375
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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