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Conserved domains on  [gi|2057220220|gb|QWX94040|]
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BST-2 [Myotis lucifugus]

Protein Classification

BST2 domain-containing protein( domain architecture ID 11245197)

BST2 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
BST2 pfam16716
Bone marrow stromal antigen 2;
52-142 3.53e-38

Bone marrow stromal antigen 2;


:

Pssm-ID: 465245 [Multi-domain]  Cd Length: 91  Bit Score: 126.40  E-value: 3.53e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057220220  52 NSPACKDGLRAEQECRNNTHLLEQELTQAQEVLRGTEAQAATCNQTVETLKISLKEEKAAGHKQQELVQKLQEEIKTLNQ 131
Cdd:pfam16716   1 NSEACKDGLRAEQECRNVTHLLQRQLTQAQDGLLQAEAQAATCNQTVVTLKASLEKEKAQGQKQQARVQELQGEIKTLNQ 80

                          90
                  ....*....|.
gi 2057220220 132 SLQNKSSELEK 142
Cdd:pfam16716  81 QLQDALAEVER 91
 
Name Accession Description Interval E-value
BST2 pfam16716
Bone marrow stromal antigen 2;
52-142 3.53e-38

Bone marrow stromal antigen 2;


Pssm-ID: 465245 [Multi-domain]  Cd Length: 91  Bit Score: 126.40  E-value: 3.53e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057220220  52 NSPACKDGLRAEQECRNNTHLLEQELTQAQEVLRGTEAQAATCNQTVETLKISLKEEKAAGHKQQELVQKLQEEIKTLNQ 131
Cdd:pfam16716   1 NSEACKDGLRAEQECRNVTHLLQRQLTQAQDGLLQAEAQAATCNQTVVTLKASLEKEKAQGQKQQARVQELQGEIKTLNQ 80

                          90
                  ....*....|.
gi 2057220220 132 SLQNKSSELEK 142
Cdd:pfam16716  81 QLQDALAEVER 91
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
 58-157 9.00e-05

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 42.23  E-value: 9.00e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057220220  58 DGLRAEQEcrnnthLLEQELTQAQEVLRGTEAQAATCNQTVETLKISLKEEKAAGHKQQELVQKLQEEIKTLNQSLQNKS 137
Cdd:COG1196   235 RELEAELE------ELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLE 308

                          90       100
                  ....*....|....*....|
gi 2057220220 138 SELEKKSAELEQLRKENEAL 157
Cdd:COG1196   309 ERRRELEERLEELEEELAEL 328
Mplasa_alph_rch TIGR04523
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ...
 95-161 1.41e-03

helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.


Pssm-ID: 275316 [Multi-domain]  Cd Length: 745  Bit Score: 38.46  E-value: 1.41e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2057220220  95 NQTVETLKISLKEEKAAGHKQQELVQKLQEEIKTLNQSLQNKSSELEKKSAELEQLRKENEALVSAK 161
Cdd:TIGR04523 567 NKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSII 633
hsdR PRK11448
type I restriction enzyme EcoKI subunit R; Provisional
 88-156 2.73e-03

type I restriction enzyme EcoKI subunit R; Provisional


Pssm-ID: 236912 [Multi-domain]  Cd Length: 1123  Bit Score: 38.01  E-value: 2.73e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2057220220   88 EAQAATCNQTVETLKISLKEEKAAGHKQQELVQKLQEEIKTLNQSLQNKSSELEKKSAELEQLRKENEA 156
Cdd:PRK11448   141 ENLLHALQQEVLTLKQQLELQAREKAQSQALAEAQQQELVALEGLAAELEEKQQELEAQLEQLQEKAAE 209
 
Name Accession Description Interval E-value
BST2 pfam16716
Bone marrow stromal antigen 2;
52-142 3.53e-38

Bone marrow stromal antigen 2;


Pssm-ID: 465245 [Multi-domain]  Cd Length: 91  Bit Score: 126.40  E-value: 3.53e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057220220  52 NSPACKDGLRAEQECRNNTHLLEQELTQAQEVLRGTEAQAATCNQTVETLKISLKEEKAAGHKQQELVQKLQEEIKTLNQ 131
Cdd:pfam16716   1 NSEACKDGLRAEQECRNVTHLLQRQLTQAQDGLLQAEAQAATCNQTVVTLKASLEKEKAQGQKQQARVQELQGEIKTLNQ 80

                          90
                  ....*....|.
gi 2057220220 132 SLQNKSSELEK 142
Cdd:pfam16716  81 QLQDALAEVER 91
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
 58-157 9.00e-05

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 42.23  E-value: 9.00e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057220220  58 DGLRAEQEcrnnthLLEQELTQAQEVLRGTEAQAATCNQTVETLKISLKEEKAAGHKQQELVQKLQEEIKTLNQSLQNKS 137
Cdd:COG1196   235 RELEAELE------ELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLE 308

                          90       100
                  ....*....|....*....|
gi 2057220220 138 SELEKKSAELEQLRKENEAL 157
Cdd:COG1196   309 ERRRELEERLEELEEELAEL 328
COG4913 COG4913
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
73-157 5.10e-04

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];


Pssm-ID: 443941 [Multi-domain]  Cd Length: 1089  Bit Score: 39.90  E-value: 5.10e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057220220   73 LEQELTQAQEVLRGTEAQAATCNQTVETLKISLKEEKAAGHKQQELVQKLQEEIKTLNQSLQNKSSELEKKS----AELE 148
Cdd:COG4913    343 LEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALrdlrRELR 422


                   ....*....
gi 2057220220  149 QLRKENEAL 157
Cdd:COG4913    423 ELEAEIASL 431
EnvC COG4942
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
 73-160 8.18e-04

Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 443969 [Multi-domain]  Cd Length: 377  Bit Score: 38.98  E-value: 8.18e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057220220  73 LEQELTQAQEVLRGTEAQAATCNQTVETLKISLKEEKAAGHKQQELVQKLQEEIKTLNQSLQNKSSELEKKSAELEQLRK 152
Cdd:COG4942    25 AEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKE 104


                  ....*...
gi 2057220220 153 ENEALVSA 160
Cdd:COG4942   105 ELAELLRA 112
Mplasa_alph_rch TIGR04523
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ...
 95-161 1.41e-03

helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.


Pssm-ID: 275316 [Multi-domain]  Cd Length: 745  Bit Score: 38.46  E-value: 1.41e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2057220220  95 NQTVETLKISLKEEKAAGHKQQELVQKLQEEIKTLNQSLQNKSSELEKKSAELEQLRKENEALVSAK 161
Cdd:TIGR04523 567 NKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSII 633
hsdR PRK11448
type I restriction enzyme EcoKI subunit R; Provisional
 88-156 2.73e-03

type I restriction enzyme EcoKI subunit R; Provisional


Pssm-ID: 236912 [Multi-domain]  Cd Length: 1123  Bit Score: 38.01  E-value: 2.73e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2057220220   88 EAQAATCNQTVETLKISLKEEKAAGHKQQELVQKLQEEIKTLNQSLQNKSSELEKKSAELEQLRKENEA 156
Cdd:PRK11448   141 ENLLHALQQEVLTLKQQLELQAREKAQSQALAEAQQQELVALEGLAAELEEKQQELEAQLEQLQEKAAE 209
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
 73-157 3.04e-03

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 37.61  E-value: 3.04e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057220220  73 LEQELTQAQEVLRGTEAQAATCNQTVETLKISLKEEKAAGHKQQELVQKLQEEIKTLNQSLQNKSSELEKKSAELEQLRK 152
Cdd:COG1196   328 LEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEE 407


                  ....*
gi 2057220220 153 ENEAL 157
Cdd:COG1196   408 AEEAL 412
COG5022 COG5022
Myosin heavy chain [General function prediction only];
67-161 3.16e-03

Myosin heavy chain [General function prediction only];


Pssm-ID: 227355 [Multi-domain]  Cd Length: 1463  Bit Score: 37.75  E-value: 3.16e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057220220   67 RNNTHLLEQELTQAQEVLRgteaqaatcnqtvetlKISLKEEKAAGHKQQELVQKLQEEIKTLNQSLQNKSSELEKKSAE 146
Cdd:COG5022    920 IENLEFKTELIARLKKLLN----------------NIDLEEGPSIEYVKLPELNKLHEVESKLKETSEEYEDLLKKSTIL 983

                           90
                   ....*....|....*
gi 2057220220  147 LEQLRKENEALVSAK 161
Cdd:COG5022    984 VREGNKANSELKNFK 998
SMC_prok_B TIGR02168
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
 61-161 6.45e-03

chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]


Pssm-ID: 274008 [Multi-domain]  Cd Length: 1179  Bit Score: 36.57  E-value: 6.45e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057220220   61 RAEQECRNNTHLLEQELTQAQEVLRGTEAQAATCNQTVETLKISLKEEKAAGHKQQELVQKLQEEIKTLNQSLQNKSSEL 140
Cdd:TIGR02168  824 ERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEEL 903

                           90       100
                   ....*....|....*....|....*
gi 2057220220  141 ---EKKSAELEQLRKE-NEALVSAK 161
Cdd:TIGR02168  904 relESKRSELRRELEElREKLAQLE 928
COG4913 COG4913
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
71-150 7.00e-03

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];


Pssm-ID: 443941 [Multi-domain]  Cd Length: 1089  Bit Score: 36.43  E-value: 7.00e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057220220   71 HLLEQELTQAQEVLRGTEAQAATCNQTVETLKISLKE--EKAAGHKQQELvQKLQEEIKTLNQSLQnkssELEKKSAELE 148
Cdd:COG4913    291 ELLEAELEELRAELARLEAELERLEARLDALREELDEleAQIRGNGGDRL-EQLEREIERLERELE----ERERRRARLE 365


                   ..
gi 2057220220  149 QL 150
Cdd:COG4913    366 AL 367
PRK12704 PRK12704
phosphodiesterase; Provisional
 114-153 7.16e-03

phosphodiesterase; Provisional


Pssm-ID: 237177 [Multi-domain]  Cd Length: 520  Bit Score: 36.29  E-value: 7.16e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 2057220220 114 KQQELVQKLQEEIKTLNQSLQNKSSELEKKSAELEQLRKE 153
Cdd:PRK12704  100 RKLELLEKREEELEKKEKELEQKQQELEKKEEELEELIEE 139
CDC3 COG5019
Septin family protein [Cell cycle control, cell division, chromosome partitioning, ...
 61-155 8.10e-03

Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton];


Pssm-ID: 227352 [Multi-domain]  Cd Length: 373  Bit Score: 36.15  E-value: 8.10e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057220220  61 RAEQ-ECRNNTHLLEQElTQAQEVLRGTEAQAatcnQTVETLKISLKEEKaaghkQQELVQKLQEEIKTLNQSLQNKSSE 139
Cdd:COG5019   288 RTEKlSGLKNSGEPSLK-EIHEARLNEEEREL----KKKFTEKIREKEKR-----LEELEQNLIEERKELNSKLEEIQKK 357

                          90
                  ....*....|....*.
gi 2057220220 140 LEKKSAELEQLRKENE 155
Cdd:COG5019   358 LEDLEKRLEKLKSNKS 373
COG4913 COG4913
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
73-162 8.57e-03

Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];


Pssm-ID: 443941 [Multi-domain]  Cd Length: 1089  Bit Score: 36.43  E-value: 8.57e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2057220220   73 LEQELTQAQEVLRGTEAQAATCNQTVETL-KISLKEEKAAGHKQQEL-VQKLQEEIKTLNQ---SLQNKSSELEKKSAEL 147
Cdd:COG4913    615 LEAELAELEEELAEAEERLEALEAELDALqERREALQRLAEYSWDEIdVASAEREIAELEAeleRLDASSDDLAALEEQL 694

                           90
                   ....*....|....*
gi 2057220220  148 EQLRKENEALVSAKG 162
Cdd:COG4913    695 EELEAELEELEEELD 709
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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