|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-437 |
6.53e-118 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 351.76 E-value: 6.53e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 1 MMKLVLMMLFLIPLS---KSYWMMMYASMLI-FMYFNMFPINLFTSYLSYGYGLDVISFWMVLLTFWIYILMILASYKIS 76
Cdd:MTH00163 1 MLKFLFMLLFLIPLCflkNSWWLVQSLLFLLsFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 77 IS-YSFDVFLFTILSLLFFLFMSFSCTNLFLFYLFFESSIIPTVILIFGWGYQPERLKAGIYLILYTMFASLPLLIGIFY 155
Cdd:MTH00163 81 KKnNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 156 IMNTNHSCFYFMIDFY--FNMYLYLSLIMAFLVKMPMFFMHFWLPKAHVEAPISGSMILAGVLLKLGGYGLLRVFNFMFI 233
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFgsLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 234 YNIYN-YIWIIISLFGSVVVGFMCLLQVDIKSMIAYSSVSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANL 312
Cdd:MTH00163 241 LGLKFnYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 313 IYERSYSRSIFINKGYMTIMPNLCLFWFLFSINNMSSPPSLNLLGEIVLINNLVSWNKSIMVFLAFSSFLSCGYSIYLYS 392
Cdd:MTH00163 321 IYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLYS 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 2229433679 393 MTQHGQFHSSLKIINLINIREYTLLFLHLMPLNFFFLKGDLLMTL 437
Cdd:MTH00163 401 YSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
42-438 |
4.60e-106 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 320.25 E-value: 4.60e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 42 SYLSYGYGLDVISFWMVLLTFWIYILMILASYK-ISISYSFDVFLFTILSLLFFLFMSFSCTNLFLFYLFFESSIIPTVI 120
Cdd:MTH00150 14 ESLSELFSVDSMSSLLISLSLWISGLMMLASQKsVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 121 LIFGWGYQPERLKAGIYLILYTMFASLPLLIGIFYIMNTNHSCFYFMI-----DFYFNMYLYLSLIMAFLVKMPMFFMHF 195
Cdd:MTH00150 94 LILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLIsslrkLLSSMGLWGLLVFLAFLVKLPMYPFHL 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 196 WLPKAHVEAPISGSMILAGVLLKLGGYGLLRVFN-FMFIYNIYNYIWIIISLFGSVVVGFMCLLQVDIKSMIAYSSVSHM 274
Cdd:MTH00150 174 WLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMvFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHM 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 275 GLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYERSYSRSIFINKGYMTIMPNLCLFWFLFSINNMSSPPSLN 354
Cdd:MTH00150 254 SLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLN 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 355 LLGEIVLINNLVSWNKSIMVFLAFSSFLSCGYSIYLYSMTQHGQFHSSLKIINLINIREYTLLFLHLMPLNFFFLKGDLL 434
Cdd:MTH00150 334 LLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWVPLLLLILKSDLL 413
|
....
gi 2229433679 435 MTLF 438
Cdd:MTH00150 414 FMWI 417
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-434 |
2.57e-103 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 314.37 E-value: 2.57e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 1 MMKLVLMMLFLIPLSKSYWMMMYASMLIFMYF-------NMFPINLFTSYLSYGYGLDVISFWMVLLTFWIYILMILASY 73
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALTFSTLLLlslftllNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 74 KI-SISYSFDVFLFTILSLLFFLFMSFSCTNLFLFYLFFESSIIPTVILIFGWGYQPERLKAGIYLILYTMFASLPLLIG 152
Cdd:MTH00014 81 KIfQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 153 IFYIMNTNHSCFYFMIDFYFNMYLYLSL-----IMAFLVKMPMFFMHFWLPKAHVEAPISGSMILAGVLLKLGGYGLLRV 227
Cdd:MTH00014 161 ILLIFYTNNSLSMLMSSMEPPSIYLMNLwwlitILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 228 FN-FMFIYNIYNYIWIIISLFGSVVVGFMCLLQVDIKSMIAYSSVSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGL 306
Cdd:MTH00014 241 SSlFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSAL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 307 FVLANLIYERSYSRSIFINKGYMTIMPNLCLFWFLFSINNMSSPPSLNLLGEIVLINNLVSWNKSIMVFLAFSSFLSCGY 386
Cdd:MTH00014 321 FALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAAY 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 2229433679 387 SIYLYSMTQHGQFHSSLKIINLINIREYTLLFLHLMPLNFFFLKGDLL 434
Cdd:MTH00014 401 SLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLI 448
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-435 |
8.46e-96 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 294.96 E-value: 8.46e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 1 MMKLVLMMLFLIPLSKSYWMMMYASMLIFMY-FNMFPINLFTSYLSYGYGLDVISFWMVLLTFWIYILMILASYKISIS- 78
Cdd:MTH00205 5 GVFSLLIILFVLKFKDWSFFSNLLLIGLFFSsFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSn 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 79 YSFDVFLFTILSLLFFLFMSFSCTNLFLFYLFFESSIIPTVILIFGWGYQPERLKAGIYLILYTMFASLPLLIGIFYIMN 158
Cdd:MTH00205 85 KNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNS 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 159 TNHSCFYFMIDFYFNMYLYLS-----LIMAFLVKMPMFFMHFWLPKAHVEAPISGSMILAGVLLKLGGYGLLRVFNFMFI 233
Cdd:MTH00205 165 LNFSLSMFFNFPLNFSDFYLFlywifLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYK 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 234 YNIYNY-IWIIISLFGSVVVGFMCLLQVDIKSMIAYSSVSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANL 312
Cdd:MTH00205 245 LNSNFSeLFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANV 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 313 IYERSYSRSIFINKGYMTIMPNLCLFWFLFSINNMSSPPSLNLLGEIVLINNLVSWNKSIMVFLAFSSFLSCGYSIYLYS 392
Cdd:MTH00205 325 NYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYS 404
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 2229433679 393 MTQHGQFHSSLKIINLINIREYTLLFLHLMPLNFFFLKGDLLM 435
Cdd:MTH00205 405 QSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-435 |
7.56e-95 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 292.87 E-value: 7.56e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 1 MMKLVLMMLFLIP---LSK---------SYWMMMYASMLIFMYFNMFPINLFTSYLsygyGLDVISFWMVLLTFWIYILM 68
Cdd:MTH00124 1 MLKIILPTIMLIPttlLSKpkflwtnttTYSLLIALLSLQWLKPPYYPTKNLTQWL----GIDQISAPLLVLSCWLLPLM 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 69 ILAS---YKISISYSFDVFLFTILSLLFFLFMSFSCTNLFLFYLFFESSIIPTVILIFGWGYQPERLKAGIYLILYTMFA 145
Cdd:MTH00124 77 ILASqnhLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLIS 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 146 SLPLLIGIFYIMNTNHSCFYFMI--------DFYFNMYLYLSLIMAFLVKMPMFFMHFWLPKAHVEAPISGSMILAGVLL 217
Cdd:MTH00124 157 SLPLLIAILYLHNQTGTLSLPMLqlthptltNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 218 KLGGYGLLRVFNFMFIYNIYNYI-WIIISLFGSVVVGFMCLLQVDIKSMIAYSSVSHMGLVIGGIMTCNYTGLSGSLVMM 296
Cdd:MTH00124 237 KLGGYGIIRITLLLPPLSNTLHYpFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILM 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 297 LGHGLCSSGLFVLANLIYERSYSRSIFINKGYMTIMPNLCLFWFLFSINNMSSPPSLNLLGEIVLINNLVSWNKSIMVFL 376
Cdd:MTH00124 317 IAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILT 396
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 2229433679 377 AFSSFLSCGYSIYLYSMTQHGQFHSSLKIINLINIREYTLLFLHLMPLNFFFLKGDLLM 435
Cdd:MTH00124 397 GLATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELIS 455
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
5-424 |
2.53e-86 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 271.08 E-value: 2.53e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 5 VLMMLFLIPLSKSYWMMMYASMLIFMYFNMFPINLFTS---YLSYGYGLDVISFWMVLLTFWIYILMILASYKISISYSF 81
Cdd:MTH00044 11 IAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSswhNLSLSLATDSLSSPLIILSCWLAPLSLLASINHLSNNSP 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 82 ---DVFLFTILSLLFFLFMSFSCTNLFLFYLFFESSIIPTVILIFGWGYQPERLKAGIYLILYTMFASLPLLIGIFYIMN 158
Cdd:MTH00044 91 nnqRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYS 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 159 TNHSCFYFMIDFYFNMYLYLSL--------IMAFLVKMPMFFMHFWLPKAHVEAPISGSMILAGVLLKLGGYGLLRVFNF 230
Cdd:MTH00044 171 SSSSLSIPLSELNWLTSLSSNSssiwwifcILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINL 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 231 MFIYNIYNYIWIIIS--LFGSVVVGFMCLLQVDIKSMIAYSSVSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFV 308
Cdd:MTH00044 251 FSLPSANNISFILIVfcCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFC 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 309 LANLIYERSYSRSIFINKGYMTIMPNLCLFWFLFSINNMSSPPSLNLLGEIVLINNLVSWNKSIMVFLAFSSFLSCGYSI 388
Cdd:MTH00044 331 LANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSL 410
|
410 420 430
....*....|....*....|....*....|....*.
gi 2229433679 389 YLYSMTQHGQFHSSLKIINLINIREYTLLFLHLMPL 424
Cdd:MTH00044 411 LIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPL 446
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
6-438 |
3.45e-86 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 270.63 E-value: 3.45e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 6 LMMLFLIPLSKSYWM---MMYASMLI-FMYFNMFPINLFTSYLSYGY-GLDVISFWMVLLTFWIYILMILAS---YKISI 77
Cdd:MTH00068 9 LMLLPTTWLSPKKWLwtlTTTNSLIIaFLSLMWFNLPSETMNFTNKYfGIDQISSPLLILTCWLLPLMILASqnhLKNEP 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 78 SYSFDVFLFTILSLLFFLFMSFSCTNLFLFYLFFESSIIPTVILIFGWGYQPERLKAGIYLILYTMFASLPLLIGIFYIM 157
Cdd:MTH00068 89 INRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQ 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 158 NTNHSCFYFMIDFYFNMYL--------YLSLIMAFLVKMPMFFMHFWLPKAHVEAPISGSMILAGVLLKLGGYGLLRVfN 229
Cdd:MTH00068 169 NSLGSLSLILLELMSPMQLmtytnkiwWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRI-S 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 230 FMF--IYNIYNYIWIIISLFGSVVVGFMCLLQVDIKSMIAYSSVSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLF 307
Cdd:MTH00068 248 ILLtpLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALF 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 308 VLANLIYERSYSRSIFINKGYMTIMPNLCLFWFLFSINNMSSPPSLNLLGEIVLINNLVSWNKSIMVFLAFSSFLSCGYS 387
Cdd:MTH00068 328 CLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYT 407
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 2229433679 388 IYLYSMTQHGQFHSSLKIINLINIREYTLLFLHLMPLNFFFLKGDLLMTLF 438
Cdd:MTH00068 408 LYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGMF 458
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-424 |
1.02e-79 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 254.05 E-value: 1.02e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 1 MMKLVLMMLFLIPL---SKSYWM----MMYA---SMLIFMYFNMFPINLFTSYLSYGygLDVISFWMVLLTFWIYILMIL 70
Cdd:MTH00110 1 MLKIIIPTIMLIPLtwlSKNNMIwintTTYSlliSLISLLLLNQPNDNSLNFSLLFF--SDSLSTPLLILTTWLLPLMLM 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 71 AS----YKISISYSfDVFLFTILSLLFFLFMSFSCTNLFLFYLFFESSIIPTVILIFGWGYQPERLKAGIYLILYTMFAS 146
Cdd:MTH00110 79 ASqhhlSKEPLTRK-KLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGS 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 147 LPLLIGIFYIMNTNHSCFYFMIDFYF--------NMYLYLSLIMAFLVKMPMFFMHFWLPKAHVEAPISGSMILAGVLLK 218
Cdd:MTH00110 158 LPLLVALLYIQNNLGSLNFLLLQLWAqplpnswsNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLK 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 219 LGGYGLLRVFNFMFIYNIYNYI-WIIISLFGSVVVGFMCLLQVDIKSMIAYSSVSHMGLVIGGIMTCNYTGLSGSLVMML 297
Cdd:MTH00110 238 LGGYGMMRITIILNPLTEFMAYpFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMI 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 298 GHGLCSSGLFVLANLIYERSYSRSIFINKGYMTIMPNLCLFWFLFSINNMSSPPSLNLLGEIVLINNLVSWNKSIMVFLA 377
Cdd:MTH00110 318 AHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMG 397
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 2229433679 378 FSSFLSCGYSIYLYSMTQHGQFHSSLKIINLINIREYTLLFLHLMPL 424
Cdd:MTH00110 398 LNMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPL 444
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
7-434 |
1.55e-78 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 250.63 E-value: 1.55e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 7 MMLFLIPLSKSYWM----MMYASMLIFMYFNMFPINLFT--------SYLSYGYGLDVISFWMVLLTFWIYILMILASYK 74
Cdd:MTH00206 2 ILIPLIMLLLMTILskkkWLWRSTTFFSFLIALLFLLWFkwssevgwSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 75 ISISYSF---DVFLFTILSLLFFLFMSFSCTNLFLFYLFFESSIIPTVILIFGWGYQPERLKAGIYLILYTMFASLPLLI 151
Cdd:MTH00206 82 HMKNEPInrqRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLI 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 152 GIFYIMNTNHSCFYFMIDFY-----FNMYLYLSLIMAFLVKMPMFFMHFWLPKAHVEAPISGSMILAGVLLKLGGYGLLR 226
Cdd:MTH00206 162 ALLFLQNSLGSLSLYILYFSklttwNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMR 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 227 VFNFM-FIYNIYNYIWIIISLFGSVVVGFMCLLQVDIKSMIAYSSVSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSG 305
Cdd:MTH00206 242 IILILgPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSA 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 306 LFVLANLIYERSYSRSIFINKGYMTIMPNLCLFWFLFSINNMSSPPSLNLLGEIVLINNLVSWNKSIMVFLAFSSFLSCG 385
Cdd:MTH00206 322 LFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAI 401
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 2229433679 386 YSIYLYSMTQHGQFHSSLKIINLINIREYTLLFLHLMPLNFFFLKGDLL 434
Cdd:MTH00206 402 YSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
42-434 |
3.46e-75 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 242.17 E-value: 3.46e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 42 SYLSYGYGLDVISFWMVLLTFWIYILMILASYKISISYSFD---VFLFTILSLLFFLFMSFSCTNLFLFYLFFESSIIPT 118
Cdd:MTH00127 51 SSLNLYMATDPLSTPLLVLTCWLLPLMILASQNHTAPEPINrqrMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPT 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 119 VILIFGWGYQPERLKAGIYLILYTMFASLPLLIGIFYIMNTNHSCFYFMIDF--------YFNMYLYLSLIMAFLVKMPM 190
Cdd:MTH00127 131 LIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLQYsqplqlssWADKLWWAGCLLAFLVKMPL 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 191 FFMHFWLPKAHVEAPISGSMILAGVLLKLGGYGLLRVFNFMFIYNIYNYI-WIIISLFGSVVVGFMCLLQVDIKSMIAYS 269
Cdd:MTH00127 211 YGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELSYpFIILALWGIIMTGSICLRQTDLKSLIAYS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 270 SVSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYERSYSRSIFINKGYMTIMPNLCLFWFLFSINNMSS 349
Cdd:MTH00127 291 SVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLAL 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 350 PPSLNLLGEIVLINNLVSWNKSIMVFLAFSSFLSCGYSIYLYSMTQHGQFHSSLKIINLINIREYTLLFLHLMPLNFFFL 429
Cdd:MTH00127 371 PPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLIL 450
|
....*
gi 2229433679 430 KGDLL 434
Cdd:MTH00127 451 KPELI 455
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
44-419 |
1.67e-54 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 188.37 E-value: 1.67e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 44 LSYGYGLDVISFWMVLLTFWIYILMILASYKiSISYSFDVFLFTILSLLFFLFMSFSCTNLFLFYLFFESSIIPTVILIF 123
Cdd:COG1008 74 ISYHLGVDGISLPLVLLTALLTPLAILASWN-EIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 124 GWGYqPERLKAGIYLILYTMFASLPLLIGIFYIMNTNHSCFYFMIDFY-------FNMYLYLSLIMAFLVKMPMFFMHFW 196
Cdd:COG1008 153 IWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALTFDIAELAaaplpltAQLLLFLAFFIAFAVKVPMFPFHTW 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 197 LPKAHVEAPISGSMILAGVLLKLGGYGLLRVFNFMF--IYNIYNYIWIIISLFGSVVVGFMCLLQVDIKSMIAYSSVSHM 274
Cdd:COG1008 232 LPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFpeASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHM 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 275 GLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYERSYSRSIFINKGYMTIMPNLCLFWFLFSINNMSSPPSLN 354
Cdd:COG1008 312 GFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSG 391
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2229433679 355 LLGEIVLINNLVSWNKSIMVFLAFSSFLSCGYSIYLYSMTQHGQFHSSLKIINLINIREYTLLFL 419
Cdd:COG1008 392 FVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAP 456
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
34-418 |
9.86e-48 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 170.24 E-value: 9.86e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 34 MFPINLFTSYLSYGYGLDVISFWMVLLTFWIYILMILASYKiSISYSFDVFLFTILSLLFFLFMSFSCTNLFLFYLFFES 113
Cdd:MTH00204 65 IISPTLNFQWGPLVFAVDGVSLFFILLTTLLIPICILISWK-SIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEG 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 114 SIIPTVILIFGWGYQPERLKAGIYLILYTMFASLPLLIGIFYIMNTNHSCFYFM-----IDFYFNMYLYLSLIMAFLVKM 188
Cdd:MTH00204 144 ILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQIllnikLPLSIQKWLLVGFFLSLAVKI 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 189 PMFFMHFWLPKAHVEAPISGSMILAGVLLKLGGYGLLRvFNFMFIYNIYNYIWIIISLFGSVVV---GFMCLLQVDIKSM 265
Cdd:MTH00204 224 PQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLR-FSWPLFPAASEYFAPLIVMLSVIAViygSLTTCRQVDFKRL 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 266 IAYSSVSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYERSYSRSIFINKGYMTIMPNLCLFWFLFSIN 345
Cdd:MTH00204 303 IAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLA 382
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2229433679 346 NMSSPPSLNLLGEIVLINNLVSWNKSIMVFLAFSSFLSCGYSIYLYSMTQHGQFHSSLKIINLINIREYTLLF 418
Cdd:MTH00204 383 NMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELLAIL 455
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
44-419 |
1.96e-46 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 166.92 E-value: 1.96e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 44 LSYGYGLDVISFWMVLLTFWIYILMILASYKiSISYSFDVFLFTILSLLFFLFMSFSCTNLFLFYLFFESSIIPTVILIF 123
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTALLTPLAVLASWE-EIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 124 GWGYqPERLKAGIYLILYTMFASLPLLIGIFYIMNTNHSCF---------YFMIDFYFNMYLYLSLIMAFLVKMPMFFMH 194
Cdd:PRK05846 153 VWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLVVVYYNATgtfdiadllNLPLPPGVQYWLFLAFFIAFAVKMPMFPLH 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 195 FWLPKAHVEAPISGSMILAGVLLKLGGYGLLRVFNFMF--IYNIYNYIWIIISLFGSVVVGFMCLLQVDIKSMIAYSSVS 272
Cdd:PRK05846 232 TWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFpdASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSIS 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 273 HMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYERSYSRSIFINKGYMTIMPNLCLFWFLFSINNMSSPPS 352
Cdd:PRK05846 312 HMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGT 391
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2229433679 353 LNLLGEIVLINNLVSWNKSIMVFLAFSSFLSCGYSIYLYSMTQHGQFHSSLKIINLINIREYTLLFL 419
Cdd:PRK05846 392 SGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLP 458
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
44-427 |
4.81e-45 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 163.19 E-value: 4.81e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 44 LSYGYGLDVISFWMVLLTFWIYILMILASYKiSISYSFDVFLFTILSLLFFLFMSFSCTNLFLFYLFFESSIIPTVILIF 123
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLTALLTLLAILASWE-SIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIG 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 124 GWGyQPERLKAGIYLILYTMFASLPLLIGIFYIMNTNHSCFYFMIDFYFNMY------LYLSLIMAFLVKMPMFFMHFWL 197
Cdd:TIGR01972 148 VWG-GPNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTFDLLELLNLPLPfgvqtwLFLAFFIAFAVKVPLFPLHTWL 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 198 PKAHVEAPISGSMILAGVLLKLGGYGLLRVFNFMF--IYNIYNYIWIIISLFGSVVVGFMCLLQVDIKSMIAYSSVSHMG 275
Cdd:TIGR01972 227 PDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFpdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMG 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 276 LVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYERSYSRSIFINKGYMTIMPNLCLFWFLFSINNMSSPPSLNL 355
Cdd:TIGR01972 307 FVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGF 386
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2229433679 356 LGEIVLINNLVSWNKSIMVFLAFSSFLSCGYSIYLYSMTQHGQFH-SSLKIINLINIREYTLLFLHLMPLNFF 427
Cdd:TIGR01972 387 VGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSnPEVAEFPDLNGREIAVLAPLVVLILFL 459
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
48-418 |
3.73e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 157.91 E-value: 3.73e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 48 YGLDVISFWMVLLTFWIYILMILASYKiSISYSFDVFLFTILSLLFFLFMSFSCTNLFLFYLFFESSIIPTVILIFGWGY 127
Cdd:MTH00217 76 FAVDGISIFFLILTALLTPICILISWN-SIKFLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 128 QPERLKAGIYLILYTMFASLPLLIGIFYIMNTNHSCFY-----FMIDFYFNMYLYLSLIMAFLVKMPMFFMHFWLPKAHV 202
Cdd:MTH00217 155 REEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYqalccLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHV 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 203 EAPISGSMILAGVLLKLGGYGLLRVFNFMF--IYNIYNYIWIIISLFGSVVVGFMCLLQVDIKSMIAYSSVSHMGLVIGG 280
Cdd:MTH00217 235 EAPVAGSVILAGVLLKLGGYGFIRFSWPLLpeASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLG 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 281 IMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYERSYSRSIFINKGYMTIMPNLCLFWFLFSINNMSSPPSLNLLGEIV 360
Cdd:MTH00217 315 IFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFL 394
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 2229433679 361 LINNLVSWNKSIMVFLAFSSFLSCGYSIYLYSMTQHGQFHSSLKIINLINIREYTLLF 418
Cdd:MTH00217 395 SLLAAFEYSYIVGVLASLGMVLSAGYSIYLYNRVCFGAPSKYLYFSRDLNRREFYVLL 452
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
48-414 |
4.10e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 158.16 E-value: 4.10e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 48 YGLDVISFWMVLLTFWIYILMILASYKiSISYSFDVFLFTILSLLFFLFMSFSCTNLFLFYLFFESSIIPTVILIFGWGY 127
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWH-SVKYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGS 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 128 QPERLKAGIYLILYTMFASLPLLIGIFYIMNTNHSCFY-------FMIDFYFNMYLYLSLIMAFLVKMPMFFMHFWLPKA 200
Cdd:MTH00226 177 REEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYltlascsHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKA 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 201 HVEAPISGSMILAGVLLKLGGYGLLRVF--NFMFIYNIYNYIWIIISLFGSVVVGFMCLLQVDIKSMIAYSSVSHMGLVI 278
Cdd:MTH00226 257 HVEAPVAGSVLLAGILLKLGGYGLVRLSwpILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVS 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 279 GGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYERSYSRSIFINKGYMTIMPNLCLFWFLFSINNMSSPPSLNLLGE 358
Cdd:MTH00226 337 ITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGE 416
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2229433679 359 IVLINNLVSWNKSIMVFLAFSSFLSCGYSIYLYSMTQHGQFHSSLKIINLINIREY 414
Cdd:MTH00226 417 YLSILSSFNWNPIIGVFVCSGVILSAVYSFYFANRVTFGAPGNLITFARDVNRREF 472
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
102-380 |
1.19e-39 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 143.99 E-value: 1.19e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 102 TNLFLFYLFFESSIIPTVILIFGWGYQPERLKAGIYLILYTMFASLPLLIGIFYIMNTNHSC--------FYFMIDFYFN 173
Cdd:pfam00361 2 NDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLsfdelskaLTGGLNSSGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 174 MYLYLSLIMAFLVKMPMFFMHFWLPKAHVEAPISGSMILAGVLLKLGGYGLLR-VFNFMFIYNIYNYIWIIISLFGSVVV 252
Cdd:pfam00361 82 LLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRrSLLYLPSSPFIQQILLILAIISMLLG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 253 GFMCLLQVDIKSMIAYSSVSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLA-NLIYERSYSRSIFINKGYMTI 331
Cdd:pfam00361 162 SLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAKT 241
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2229433679 332 MPNLCLFWFLFSINNMSSPPSLNLLGEIVLINNLVSWNKSIMVFLAFSS 380
Cdd:pfam00361 242 MPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
20-428 |
4.04e-38 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 142.74 E-value: 4.04e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 20 MMMYASMLIFMYFNMFPINLFTSYLSYGYGLDVISFWMVLLTFwiyiLMILASYKISISYSFDVFLFTILSLLFFLFMSF 99
Cdd:MTH00094 4 LFFFSPFLFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLIF----MMVFILGLVLLSEKNFNLLILSNLLILICLLFF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 100 SCTNLFLFYLFFESSIIPTVILIFGWGYQPERLKAGIYLILYTMFASLPLLIGIFYIMNTNHSCFYfmiDFYFNMYLYLS 179
Cdd:MTH00094 80 VSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYF---DFFLSWEMFFI 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 180 LIMAFLVKMPMFFMHFWLPKAHVEAPISGSMILAGVLLKLGGYGLLRVFNFMfiYNIYNYIWIIISLFGSVVVGFMCLLQ 259
Cdd:MTH00094 157 LSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSL--NFVYNNFWIIFSLLGMILSSFCCVFQ 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 260 VDIKSMIAYSSVSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYERSYSRSIFINKGYMTIMPNLCLFW 339
Cdd:MTH00094 235 SDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIF 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 340 FLFSINNMSSPPSLNLLGEIVLINNLVSWNKSIMVFLAFSSFLSCGYSIYLYSMTQHGQFHSSLKIINLINIREYTLLFL 419
Cdd:MTH00094 315 SLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVGLSLPLVFMMF 394
|
....*....
gi 2229433679 420 HLMPLNFFF 428
Cdd:MTH00094 395 NMFWLSLFY 403
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
44-380 |
3.19e-28 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 116.67 E-value: 3.19e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 44 LSYGYGLDVISFWMVLLTFWIYILMILASYKISisYSFDVFLFTILSLLFFLFMSFSCTNLFLFYLFFESSIIPTVILIF 123
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWKVT--RKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLIS 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 124 GWGYQpERLKAGIYLILYTMFASLPLLIGIFyIMNTNHSCFYFMI--------DFYFNMYLYLSLIMAFLVKMPMFFMHF 195
Cdd:PRK12561 129 IWGGQ-KRLYAATKFILYTALASIFILVAGL-ALALSGDTFTFDLaelgaksyPLALELLLYAGFLIAFGVKLPIFPLHT 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 196 WLPKAHVEAPISGSMILAGVLLKLGGYGLLRvFNFMFIYNIYNYIWIIISLFGSVVV---GFMCLLQVDIKSMIAYSSVS 272
Cdd:PRK12561 207 WLPDAHGEASAPVSMILAGVLLKMGGYALIR-FNVQMLPDAHVYFAPALAILGVVNIiygALNAFAQDNVKRRLAYSSVS 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 273 HMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYERSYSRSIFINKGYMTIMPNlclfwfLFSINNMSSPPS 352
Cdd:PRK12561 286 HMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPK------TFALFTASSMAS 359
|
330 340
....*....|....*....|....*...
gi 2229433679 353 LNLLGeivlINNLVSwnkSIMVFLAFSS 380
Cdd:PRK12561 360 LALPG----MSGFVS---ELTVFLGITS 380
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
50-395 |
7.94e-27 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 111.39 E-value: 7.94e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 50 LDVISFWMVLLTFWIYILMILASYK-ISISYSFDVFLFTILSLLFFLFMSFSCTNLFLFYLFFESSIIPTVILIfGWGYQ 128
Cdd:COG0651 74 ADRLSALFLLLTALVALAVLLYSIGyMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLV-ALGGT 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 129 PERLKAGIYLILYTMFASLPLLIGIFYIMNTNHScfYFMIDFYFNMY---------LYLSLIMAFLVKMPMFFMHFWLPK 199
Cdd:COG0651 153 KEALRAGLKYLILNLVGSALFLLGVGLLYGATGT--LNMADLAARLAeldpglllaAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 200 AHVEAPISGSMILAGVLLKLGGYGLLRVFNFMFIYNIYNYIWIIISLFG--SVVVG-FMCLLQVDIKSMIAYSSVSHMGL 276
Cdd:COG0651 231 AYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPALFLGTLLLVLGllTMLVGaLGALAQRDLKRLLAYSSVSQIGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 277 VIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYERSYSRSIFINKGYMTIMPNLCLFWFLFSINNMSSPPSLNLL 356
Cdd:COG0651 311 ILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFV 390
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2229433679 357 GEIVLINNLV-SWNKSIMVFLAFSSFLSCGYSIYLYSMTQ 395
Cdd:COG0651 391 SKWLLLQAALeAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
44-319 |
4.95e-22 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 98.24 E-value: 4.95e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 44 LSYGYGLDVISFWMVLLTFWIYILMILASYkiSISYSFDVFLFTILSLLFFLFMSFSCTNLFLFYLFFESSIIPTVILIF 123
Cdd:PRK02546 79 LTWSVGADGLSMPLILLTGFITTLAVLAAW--PVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLA 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 124 GWGYQpERLKAGIYLILYTMFASLPLLIGIFYIMNTNHSCFYFM-------IDFYFNMYLYLSLIMAFLVKMPMFFMHFW 196
Cdd:PRK02546 157 IWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMtalaakdFGLGFQLLCYAGLLIAYGVKLPIVPLHTW 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 197 LPKAHVEAPISGSMILAGVLLKLGGYGLLRvFNFMFIYNIYNYIWIIISLFGSVVVGFMCLL---QVDIKSMIAYSSVSH 273
Cdd:PRK02546 236 LPDAHGEATAPVHMLLAGILLKMGGYALLR-MNAGMLPDAHAQFAPLLIVLGVVNIIYAALTsfaQRNLKRKIAYSSISH 314
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2229433679 274 MGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYERSYS 319
Cdd:PRK02546 315 MGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHT 360
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
49-349 |
5.72e-21 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 95.01 E-value: 5.72e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 49 GLDVISFWMVLLTFWIYILMILASYKISISYSfdVFLFTILSLLFFLFMSFSCTNLFLFYLFFESSIIPTVILIFGWGYQ 128
Cdd:CHL00011 81 GIDGLSIGPILLTGFITTLATLAAWPVTRNSR--LFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGK 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 129 pERLKAGIYLILYTMFASLPLLIGIFYI--MNTNHSCFYFMI------DFYFNMYLYLSLIMAFLVKMPMFFMHFWLPKA 200
Cdd:CHL00011 159 -KRLYSATKFILYTAGGSIFLLIGVLGMglYGSNEPTLNFETlanqsyPVALEILFYIGFLIAYAVKLPIIPLHTWLPDT 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 201 HVEAPISGSMILAGVLLKLGGYGLLRVfNFMFIYNIYNYIWIIISLFGSVVV---GFMCLLQVDIKSMIAYSSVSHMGLV 277
Cdd:CHL00011 238 HGEAHYSTCMLLAGILLKMGAYGLIRI-NMELLPHAHSIFSPWLVIVGAIQIiyaASTSLGQRNLKKRIAYSSVSHMGFI 316
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2229433679 278 IGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYERsySRSIFINK--GYMTIMPNLclfWFLFSINNMSS 349
Cdd:CHL00011 317 IIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDR--IRLVYLDEmgGIAIPMPKI---FTMFSSFSMAS 385
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
44-322 |
1.26e-18 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 87.83 E-value: 1.26e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 44 LSYGYGLDVISFWMVLLTfwiYILMILASYKISISYSFDVFLFTILSLLFF-LFMSFSCTNLFLFYLFFESSIIPTVILI 122
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLN---SLLTLIAIYSSDESIQRPRFYYSLLLLLNAgVSGAFLAQDLLLFFLFYELELIPLYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 123 FGWGYQpERLKAGIYLILYTMFASLPLLIGIF-YIMNTNHSCFYF------MIDFYFNMYLYLSLIMAFLVKMPMFFMHF 195
Cdd:PRK06473 148 AIWGGQ-RRGYAATKFLLYTAISGILILVSFLgLVWLSGASSFDYeplrshTLPLSTQLLLLAPILVGFGIKIPLVPFHT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 196 WLPKAHVEAPISGSMILAGVLLKLGGYGLLRVFNFMFIYNIYNYIWIIISLFG-SVVVGFMC-LLQVDIKSMIAYSSVSH 273
Cdd:PRK06473 227 WLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVvSVLYGASCaIAQKDMKKMVAYSSIGH 306
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2229433679 274 MGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYERSYSRSI 322
Cdd:PRK06473 307 MGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDV 355
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
48-390 |
5.01e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 83.00 E-value: 5.01e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 48 YGLDVISFWMVLLTFWIYILMILASYKISISYSfDVFLFTILSLLFFLFMSFSCTNLFLFYLFFESSIIPTVILIfGWGY 127
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAIGYGEHRQ-TRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALV-AMGG 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 128 QPERLKAGIYLILYTMFASLPLLIGIFYImntnhscfyFMIDFYFNMYL--------------YLSLIMAFLVKMPMFFM 193
Cdd:PRK08375 151 DRRALAAARKYLIVGLIGSTFLLIGVGLL---------YGVTGTLNMADlagalaenptvvtaFGFVLLALALKAAVFPL 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 194 HFWLPKAHVEAPISGSMILAGVLLKLGGYGLLRVFNFMFIYNIYN-----YIWIIISLFGSVVVGFMCLLQVDIKSMIAY 268
Cdd:PRK08375 222 HTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGGDFRFalglgWLLAVLALLSMLVGSLAALGQDDVKRVLAY 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 269 SSVSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYERSYSRSIFINKGYMTIMPNLCLFWFLFSINNMS 348
Cdd:PRK08375 302 STVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIG 381
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2229433679 349 SPPSLNLLGEIVLINNLVS-WNKSIMVFLAFSSFLSCGYSIYL 390
Cdd:PRK08375 382 VPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLYFLRI 424
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
50-367 |
1.99e-15 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 77.66 E-value: 1.99e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 50 LDVISFWMVLLTFWIYILMILASYKIsisYSFDVFLFTILSLlFFLFMSFSCTNLFLFYLFFESSIIPTVILIFGWGYQP 129
Cdd:MTH00062 43 FDSLSFYLILLVLFLGLYSQVMFYNL---LSGVSRFFLFLSL-IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYS 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 130 ERLKAGIYLILYTMFASLPLLIGIFYIMNTNHSCFYFMIDFYFNMYL--YLSLIMAFLVKMPMFFMHFWLPKAHVEAPIS 207
Cdd:MTH00062 119 ERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDDSVSLivYYVLSFMFITKVPLFPFHTWLPIVHAEASSP 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 208 GSMILAGVLLKLGGYGLLRVFNFMFIYNIYNYIWIIisLFGSVVVGFMCLLQVDIKSMIAYSSVSHMGLVIGGIMTCNYT 287
Cdd:MTH00062 199 VSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLC--CLFSVFFLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWS 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 288 GLSGSLVMMLGHGLCSSGLFVLANLIYERSYSRSIFINKGYMTIMPNLCLFWFLFSINNMSSPPSLNLLGEIVLINNLVS 367
Cdd:MTH00062 277 SINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFG 356
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
44-349 |
5.40e-14 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 73.59 E-value: 5.40e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 44 LSYGYGLDVISFWMVLLTfwiYILMILASYkiSISYSFD-VFLFTILSLLFFLFMS--FSCTNLFLFYLFFESSIIPTVI 120
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLN---SLLTWIAIY--SIGENTErPRLYYSLILLINGGIAgaLLAQNLLLFFLFYELELIPFYL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 121 LIFGWGYQpERLKAGIYLILYTMFASLPLLIGIFYI--MNTNHSCFYFMI---DFYFNMYLYL--SLIMAFLVKMPMFFM 193
Cdd:PRK07363 146 LIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIvwLSGSTSFDYDAIstqNLSLNTQLILltGLLLGFGIKIPLVPL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 194 HFWLPKAHVEAPISGSMILAGVLLKLGGYGLLRvFNFMFIYNIYNYIWIIISLFGSVVV---GFMCLLQVDIKSMIAYSS 270
Cdd:PRK07363 225 HTWLPDAYTEASPAVAILLGGVLAKLGTYGLLR-FGLQLFPQTWSLVAPGLAIIGTISViygALSAIAQKDIKRMVAYSS 303
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2229433679 271 VSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYERSYSRSIFINKGYMTIMPNLCLFWFLFSINNMSS 349
Cdd:PRK07363 304 IGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLVLAGMAS 382
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
83-362 |
1.91e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 65.76 E-value: 1.91e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 83 VFLFTILSLLFFLFMSFSCTNLFLFYLFFESSIIPTVILIfGWGYQPERLKAGIYLILYTMFASLPLLIGIFYI------ 156
Cdd:PRK12665 112 IFLPTYLILVAGVSNAFLAGDLFNLYVGFEILLVASYVLL-TLGATAARVRAGVTYVMVSMVSSLLFLIGIALVyaatgt 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 157 MNTNHSCFYFM-IDFYFNMYLYLSLIMAFLVKMPMFFMHFWLPKAHVEAPISGSMILAGVLLKLGGYGLLRVFNFMFIYN 235
Cdd:PRK12665 191 LNMADLAVRLDeLPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGG 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 236 IYNYIWIIISLFGSVVVGFMCLLQVDIKSMIAYSSVSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYE 315
Cdd:PRK12665 271 GLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIER 350
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 2229433679 316 RSYSRSIFINKGYMTIMPNLCLFWFLFSINNMSSPPSLNLLGEIVLI 362
Cdd:PRK12665 351 QAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALL 397
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
181-393 |
7.69e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 60.76 E-value: 7.69e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 181 IMAFLVKMPMFFMHFWLPKAHVEAPISGSMILAGVLLKLGGYGLLRVFNFMF--------IYNIYNYIWIIISLFGSVVV 252
Cdd:PRK12667 230 LWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFgispslidFRAALSPILIILGAVSAIIG 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 253 GFMCLLQVDIKSMIAYSSVSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYERSYSRSIFINKGYMTIM 332
Cdd:PRK12667 310 ALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKM 389
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2229433679 333 PNLCLFWFLFSINNMSSPPSLNLLGEIVLINNLVSWNKSI--MVFLAFSSFLSCGYSIYLYSM 393
Cdd:PRK12667 390 PIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLpaLVLLIASAISLVGYFRAWYSL 452
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-402 |
9.34e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 57.44 E-value: 9.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 50 LDVISFWMVLLTFWIYILMILASYKIS---ISYSFDVFLFTILSLLFFLFMSFSCTN-LFLFYLFFESSIIPTVILIFGW 125
Cdd:PRK12662 74 VDILSATMLVLVNFIAVMSVLYGIYPNrkeISVNKIPSFYSAFLLCLGGLLGILVSNdVFNIYVFLEISSISSYVLVAMG 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 126 GYQPERLKAGIYLILYTMFASLPLL-IGIFYIMNTN---HSCFYFMIDFYFNMYLYLSLIMAFL---VKMPMFFMHFWLP 198
Cdd:PRK12662 154 RDKKALVAAFEYLIIGTIGATFYLIgIGFLYAITGTlnmGDMFLIIQDLPTNRAIQIGVLFIMVglfIKAALFPFHKWLI 233
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 199 KAHVEAPISGSMILAGVLLKLGGYGLLRVF------NFMFIYNIYNYIWIIISLFGSVVVGFMCLLQVDIKSMIAYSSVS 272
Cdd:PRK12662 234 QAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkaNFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSIS 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 273 HMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYERSYSRSIFINKGYMTIMPNLCLFWFLFSINNMSSPPS 352
Cdd:PRK12662 314 HIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPT 393
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 2229433679 353 LNLLGEIVLINNLVSWNKSI-MVFLAFSSFLSCgysIYLYSMTQHGQFHSS 402
Cdd:PRK12662 394 SGFVAKWYILDAFIKSNAWIgLVVLLVGSGLSV---IYVWKIVEALYFESR 441
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
187-362 |
4.77e-08 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 54.94 E-value: 4.77e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 187 KMPMFFMHFWLPKAHVEAPISGSMILAGVLLKLGGYGLLRVFNFMFIYNIYNYIWIIISLFG--SVVV-GFMCLLQVDIK 263
Cdd:PRK06458 227 KVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDFPGRLLLIFGllSVLVaAFFLLRQRDIK 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 264 SMIAYSSVSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYERSYSRSIFINKGYMTIMPNLCLFWFLFS 343
Cdd:PRK06458 307 RLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGA 386
|
170
....*....|....*....
gi 2229433679 344 INNMSSPPSLNLLGEIVLI 362
Cdd:PRK06458 387 LAIAGMPPFGVFISEFLIL 405
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
30-316 |
3.02e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 52.65 E-value: 3.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 30 MYFNMFPINLFtsyLSYGYG----LDVISFWMVLLTFWIYILMILASYKISISYSFDVFLftiLSLLFFLFMSFSCTNLF 105
Cdd:PRK07234 44 LVASMVPLELT---LLDNFGvtlrADALSGYFILTNALVTLAVIFYCWESAKTRFFYAQL---LILHGSVNAAFVCADLI 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 106 LFYLFFESSIIPTVILIfGWGYQPERLKAGIYLILYTMFASLPLLIGIFYIMNTNHScFYFMIDFYFNMYLYLSLIMAFL 185
Cdd:PRK07234 118 SLYVALEVLSIATFLLV-AYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGT-FAFSGLATADPEAFALIALGLL 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 186 VKMPMFFMHFWLPKAHVEAPISGSMILAGVLLKLGGYGLLRVFNFMFIYNIYNYIWIIIS-LFGSvvvgFMCLLQVDIKS 264
Cdd:PRK07234 196 VKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTaLLGV----LFALLEKDLKR 271
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 2229433679 265 MIAYSSVSHMGLVIGGimtcnytGLSGSLvMMLGHGLCSSGLFVLANLIYER 316
Cdd:PRK07234 272 MLAFSTISQLGFILAA-------PLVGGL-YALAHGLVKSTLFLCAGALPSR 315
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
4-313 |
1.71e-06 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 50.11 E-value: 1.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 4 LVLMMLFLIPLSKSYWMMMYASMLIF---MYFNMFPINLFTSYLSYG-YGLDVISFWMVLLTFWIYILMILASY---KIS 76
Cdd:COG1007 18 LVLLLLDLFLPRRSRRLLAGLALLGLllaLALLLLALGGGTGTAFGGmFVVDGFALFFKLLILLAALLVLLLSRdylERR 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 77 ISYSFDVFLFTILSLLFFLFMSFScTNLFLFYLFFESSIIPTVILIFGWGYQPERLKAGIYLILYTMFASLPLLIGIFYI 156
Cdd:COG1007 98 GLLRGEFYALLLFATLGMMLMASA-NDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLL 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 157 ------MNTNHSCFYFMIDFYFNMYLYLSLIM---AFLVKMPMFFMHFWLPKAHVEAPISGSMILAGVLLKLGGYGLLRV 227
Cdd:COG1007 177 ygatgsLNLAGIAAALAAGGANSPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRL 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 228 FNFMFIYNIYNYIWIIISL-FGSVVVG-FMCLLQVDIKSMIAYSSVSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSG 305
Cdd:COG1007 257 LVEAFPGLAADWQLLLAVLaVLSMTVGnLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLG 336
|
....*...
gi 2229433679 306 LFVLANLI 313
Cdd:COG1007 337 AFAVILLL 344
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-281 |
2.42e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 49.71 E-value: 2.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 103 NLFLFYLFFESSIIPTVILIFGWGYQPERLKAGI-YLILYTMFASLPLL-IGIFYIMNTNHSCFYFMIDFYFNMYLYLSL 180
Cdd:PRK08376 142 DLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIkYMFVGSLASSMVLLgIALLYGQYGTLNMAYLAVKMSENPTVVAKI 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 181 IMAFLV-----KMPMFFMHFWLPKAHVEAPISGSMILAGVLLKLGGYGLLRVFNFMFIYNIYNYIWIIISLFG--SVVVG 253
Cdd:PRK08376 222 ALALFIaglamKSGAVPVHMWLPDAYPAAPSSISAMLLVIKQAGLYALARVLFSIYGPAINLATVGWVIIILGclTMFVG 301
|
170 180
....*....|....*....|....*....
gi 2229433679 254 F-MCLLQVDIKSMIAYSSVSHMGLVIGGI 281
Cdd:PRK08376 302 VaMAVVQKDVKRLLAYHSVSQIGYMLLGL 330
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
27-391 |
2.50e-06 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 49.61 E-value: 2.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 27 LIFMYFNMFPINLFTSYLSYG-----YGLDVISFWMVLLTFWIYILMILASYKISISYSFDVFLFTILSLLFFLFMSFSc 101
Cdd:PRK08668 39 LIKLYFTLKVGTGEKLTLFFGgfkltFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDAYFNMFALMSLAGVLGVFLA- 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 102 TNLFLFYLFFESSIIPTVILIFgWGYQPERLKAGIYLILYTMFASLpLLIGIFYIMNTNHSCFYFMI--------DFYFN 173
Cdd:PRK08668 118 NDLLTLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVLSAIGAYA-MLYAIFLIYAKTGTFDFADIsqglindtSTGFA 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 174 MYLYLSLIMAFLVKMPMFFMHFWLPKAHVEAPISGSMILA---------GVLLKLGGYGLLRVFNFMFIYNIYNYIWIII 244
Cdd:PRK08668 196 LIVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSgqlsklgayGFLLVLYVLPGTKLFSEFGTYRGVPLFNYIL 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 245 SLFG--SVVVG-FMCLLQVDIKSMIAYSSVSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYERSYSRS 321
Cdd:PRK08668 276 AWLGniSIIVGtLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVIYRTGTTK 355
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 322 IFINKGYMTIMPNLCLFWFLFSINNMSSPPSLNLLGEIVLINNLVSWNKSIMVFLAFssFLSCGYSIYLY 391
Cdd:PRK08668 356 ISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMAF--FGSIGSFLYVF 423
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-98 |
4.17e-06 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 45.21 E-value: 4.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 1 MMKLVLMMLFLIPLSKS-------YWMMMYASMLIFMYFNMF--PINLFTSYLSYGYGLDVISFWMVLLTFWIYILMILA 71
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLskpkwlwTTSTLYSLLLALLSLLLLnnPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 2229433679 72 SYKISISYSFD---VFLFTILSLLFFLFMS 98
Cdd:pfam01059 81 SQKHLKSEPNNrqrTFIFLLILLQLFLILT 110
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
177-323 |
1.94e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 46.67 E-value: 1.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 177 YLSLIMAFLVKMPMFFMHFWLPKAHVEAPISGSMILAGVLLKLGGYGLLRVFNFMFIYNIYNYIWIIISLFGSVVVGFMC 256
Cdd:PRK08676 209 FLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGAAEQFSNVLIGLGIFSIAVAA 288
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 257 ---LLQVDIKSMIAYSSVSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYeRSYSRSIF 323
Cdd:PRK08676 289 fsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILH-RQYRSDRF 357
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
92-362 |
3.54e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 46.26 E-value: 3.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 92 LFFLFMSFSCTNLFLFYLFFESSIIPTVILIFGWGYQPERLKAGIYLILYTMFASLPLLIGIFYIMNTNHScFYFMIDFY 171
Cdd:PRK08667 121 ILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGS-FELSPLGA 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 172 FNMYLYLSLIMAFL---VKMPMFFMHFWLPKAHVEAPISGSMILAGVLLKLGGYGLLRVFNFMFIYNIYNYIWIIISLFG 248
Cdd:PRK08667 200 SAGILSLVFLLLFLgfgIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWGVLILLAGSI 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 249 SVVVGFM-CLLQVDIKSMIAYSSVSHMGLVIGGI-----------MTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYER 316
Cdd:PRK08667 280 SALLGVIyALKEHDLKGLLAYSSIENIGIILMGIglyvifgvyglDTLALLALGGALFHSLNHALFKSLLFLTAGSVVHA 359
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2229433679 317 SYSRSIFINKGYMTIMPNLCLFWFLFSINNMSSPPSLNLLGEIVLI 362
Cdd:PRK08667 360 TGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLY 405
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
180-307 |
9.04e-05 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 44.81 E-value: 9.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 180 LIMAFLVKMPMFFMHFWLPKAHVEAPISGSMILAGVLLKLGGYGLLRVFNFMFIYNIYNYIWIIISL-FGSVVVG-FMCL 257
Cdd:PRK05777 210 LLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLVVAFGGLSEDWQQVLAIIaIASMLVGnLAAL 289
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 2229433679 258 LQVDIKSMIAYSSVSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLF 307
Cdd:PRK05777 290 SQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
6-322 |
1.70e-04 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 43.65 E-value: 1.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 6 LMMLFLIPLSKSYWMMMYASMLIFMYFNMFPINLFTSYLSYGYGLDVISFWMVLLTFWIYILMILasykiSISYSFDVFL 85
Cdd:PRK06589 46 IFFFGNILLIDLLFLKGIRAQFELMDFGNYSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAIN-----NIDSSSRFLF 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 86 FTILSLLFFLFMSFScTNLFLFYLFFESSIIPTVILIfGWGYQPERLKAGIYLILYTMFASLPL-LIGIFYIMNTNHSC- 163
Cdd:PRK06589 121 FFNLTILIGVLIALS-SDLFTMFVCYELLTISTAFLI-GHTRNNISLSGGYKYLKILMISALLLfLPAVILIYTKTGNLd 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 164 FYFMIDFYFNMYLYLSLIMAF-LVKMPMFFMHFWLPKAHVEAPISGSMILAGVLLKLGGYGLLRVFNFMF------IYNI 236
Cdd:PRK06589 199 FVSGGLFSKNQSIILLLMFIYgIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFglsylqRIFA 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 237 YNYIWIIISLFGSVVVGFMCLLQVDIKSMIAYSSVSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYER 316
Cdd:PRK06589 279 EFNWLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSL 358
|
....*.
gi 2229433679 317 SYSRSI 322
Cdd:PRK06589 359 KKEDQV 364
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
179-308 |
2.24e-04 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 43.60 E-value: 2.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 179 SLIMAFLVKMPMFFMHFWLPKAHVEAPISGSMILAGVLLKLGGYGLLRVFNFMFIYNIYNYIWIIISLFGSVVVGF---M 255
Cdd:PRK08377 211 LLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKLVIIMATLTVFFaelS 290
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2229433679 256 CLLQVDIKSMIAYSSVSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFV 308
Cdd:PRK08377 291 ALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFL 343
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
66-309 |
1.08e-03 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 41.09 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 66 ILMILASYKISISYSFDVFLFTILSLLFFLFMSF--SCTNLFLFYLFFESSIIPTVILIFGWGYQPERLKAGI-YLILYT 142
Cdd:TIGR01770 84 LLTFFFALSYLSKEKINKFEFYILLLFALLGIFLlvSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLkYFILGA 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 143 MFASLPL--------LIGIFYIMNTNHSCFYFMIDFYFNMYLYLSLIMAFLVKMPMFFMHFWLPKAHVEAPISGSMILAG 214
Cdd:TIGR01770 164 FSSGLLLfgisliygFTGSLNFEDLLLFLSNGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSI 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 215 VLLKLGGYGLLRVF-NFMFIYNIYNYIWIIISLFGSVVVG-FMCLLQVDIKSMIAYSSVSHMGLVIGGIMTCNYTGLSGS 292
Cdd:TIGR01770 244 VPKIAIFAVFLRLFlYILFGFSEAWQIFLAIIAFLSMLIGnFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAV 323
|
250
....*....|....*..
gi 2229433679 293 LVMMLGHGLCSSGLFVL 309
Cdd:TIGR01770 324 LFYIFIYALMSLGAFGV 340
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
182-322 |
6.12e-03 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 39.26 E-value: 6.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2229433679 182 MAFLVKMPMFFMHFWLPKAHVEA-PISgSMILAGVLLKLGGYGLLRVFNFMFIYNIYNYIWIIISLFGSVVVGFMCLLQV 260
Cdd:PRK12650 216 VAAFTKSAQFPFHFWLPEAMAAItPVS-AFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKT 294
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2229433679 261 DIKSMIAYSSVSHMGLVIGGIMTCNYTGLSGSLVMMLGHGLCSSGLFVLANLIYERSYSRSI 322
Cdd:PRK12650 295 DLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDI 356
|
|
| |
