|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-360 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 701.01 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 1 MTIIRKKHPLIKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00100 1 MTNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 81 YAHANGASMFFICLFLHVGRGVYYGSYNMIETWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160
Cdd:MTH00100 81 YLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 161 VEWIWGGFSVDKATLTRFFAFHFILPFIVAALVLVHLLFLHETGSNNPSGLNSDADKIPFHPYYTIKDLLGVLILLMVLM 240
Cdd:MTH00100 161 VEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 241 ILVLFFPDVLGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPLLHTSKQRGLTFRPI 320
Cdd:MTH00100 241 LLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPL 320
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2557454259 321 TQTVYWILVSDLLILTWIGGQPVEYPFIIIGQAASIAYFT 360
Cdd:MTH00100 321 SQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFL 360
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
11-359 |
5.73e-116 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 341.77 E-value: 5.73e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 11 IKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYAHANGASMF 90
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 91 FICLFLHVGRGVYYGSY------NmietWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWI 164
Cdd:COG1290 100 FAAVYLHMFRGFFYGAYkkprelN----WIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 165 WGGFSVDKATLTRFFAFH-FILPFIVAALVLVHLLFLHETGSNNPSG----LNSDADKIPFHPYYTIKDLLGVLILLMVL 239
Cdd:COG1290 176 FGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVF 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 240 MILVLFFPDvlGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALILSILILAIMPLLHTSKQRGLTF 317
Cdd:COG1290 256 ALLAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRY 333
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2557454259 318 RPITQTVYWILVSDLLILTWIGGQPVEYpfIIIGQAASIAYF 359
Cdd:COG1290 334 RPVRTALGVAFIVFFIVLTILGANPPIA--TLLGSINTVTYF 373
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
9-206 |
2.57e-91 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 271.93 E-value: 2.57e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 9 PLIKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYAHANGAS 88
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 89 MFFICLFLHVGRGVYYGSYN--MIETWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWG 166
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 2557454259 167 GFSVDKATLTRFFAFHFILPFIVAALVLVHLLFLHETGSN 206
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
18-204 |
3.68e-84 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 253.46 E-value: 3.68e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 18 FIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYAHANGASMFFICLFLH 97
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 98 VGRGVYYG--SYNMIETWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATL 175
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 2557454259 176 TRFFAFHFILPFIVAALVLVHLLFLHETG 204
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
258-339 |
2.02e-07 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 50.18 E-value: 2.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 258 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPLLHTSKQRGLTF-RPITQTVYWIlvsDLLILT 336
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATTVFLF---GTVVAL 141
|
...
gi 2557454259 337 WIG 339
Cdd:TIGR01156 142 WLG 144
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-360 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 701.01 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 1 MTIIRKKHPLIKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00100 1 MTNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 81 YAHANGASMFFICLFLHVGRGVYYGSYNMIETWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160
Cdd:MTH00100 81 YLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 161 VEWIWGGFSVDKATLTRFFAFHFILPFIVAALVLVHLLFLHETGSNNPSGLNSDADKIPFHPYYTIKDLLGVLILLMVLM 240
Cdd:MTH00100 161 VEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 241 ILVLFFPDVLGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPLLHTSKQRGLTFRPI 320
Cdd:MTH00100 241 LLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPL 320
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2557454259 321 TQTVYWILVSDLLILTWIGGQPVEYPFIIIGQAASIAYFT 360
Cdd:MTH00100 321 SQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFL 360
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-360 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 638.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 1 MTIIRKKHPLIKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00131 1 MASLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 81 YAHANGASMFFICLFLHVGRGVYYGSYNMIETWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160
Cdd:MTH00131 81 NLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 161 VEWIWGGFSVDKATLTRFFAFHFILPFIVAALVLVHLLFLHETGSNNPSGLNSDADKIPFHPYYTIKDLLGVLILLMVLM 240
Cdd:MTH00131 161 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 241 ILVLFFPDVLGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPLLHTSKQRGLTFRPI 320
Cdd:MTH00131 241 SLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPL 320
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2557454259 321 TQTVYWILVSDLLILTWIGGQPVEYPFIIIGQAASIAYFT 360
Cdd:MTH00131 321 TQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFS 360
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-360 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 635.02 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 1 MTIIRKKHPLIKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00119 2 APNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 81 YAHANGASMFFICLFLHVGRGVYYGSYNMIETWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160
Cdd:MTH00119 82 NLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 161 VEWIWGGFSVDKATLTRFFAFHFILPFIVAALVLVHLLFLHETGSNNPSGLNSDADKIPFHPYYTIKDLLGVLILLMVLM 240
Cdd:MTH00119 162 VEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 241 ILVLFFPDVLGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPLLHTSKQRGLTFRPI 320
Cdd:MTH00119 242 TLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPL 321
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2557454259 321 TQTVYWILVSDLLILTWIGGQPVEYPFIIIGQAASIAYFT 360
Cdd:MTH00119 322 SQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFT 361
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-360 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 622.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 1 MTIIRKKHPLIKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00074 2 AHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 81 YAHANGASMFFICLFLHVGRGVYYGSYNMIETWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160
Cdd:MTH00074 82 NIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 161 VEWIWGGFSVDKATLTRFFAFHFILPFIVAALVLVHLLFLHETGSNNPSGLNSDADKIPFHPYYTIKDLLGVLILLMVLM 240
Cdd:MTH00074 162 VQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALA 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 241 ILVLFFPDVLGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPLLHTSKQRGLTFRPI 320
Cdd:MTH00074 242 LLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPL 321
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2557454259 321 TQTVYWILVSDLLILTWIGGQPVEYPFIIIGQAASIAYFT 360
Cdd:MTH00074 322 TQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFL 361
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
4-360 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 604.99 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 4 IRKKHPLIKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYAH 83
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 84 ANGASMFFICLFLHVGRGVYYGSYNMIETWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEW 163
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 164 IWGGFSVDKATLTRFFAFHFILPFIVAALVLVHLLFLHETGSNNPSGLNSDADKIPFHPYYTIKDLLGVLILLMVLMILV 243
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 244 LFFPDVLGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPLLHTSKQRGLTFRPITQT 323
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350
....*....|....*....|....*....|....*..
gi 2557454259 324 VYWILVSDLLILTWIGGQPVEYPFIIIGQAASIAYFT 360
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFF 357
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
11-359 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 585.21 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 11 IKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYAHANGASMF 90
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 91 FICLFLHVGRGVYYGSYNMIETWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSV 170
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 171 DKATLTRFFAFHFILPFIVAALVLVHLLFLHETGSNNPSGLNSDADKIPFHPYYTIKDLLGVLILLMVLMILVLFFPDVL 250
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 251 GDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPLLHTSKQRGLTFRPITQTVYWILVS 330
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340
....*....|....*....|....*....
gi 2557454259 331 DLLILTWIGGQPVEYPFIIIGQAASIAYF 359
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYF 349
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
4-359 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 564.72 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 4 IRKKHPLIKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYAH 83
Cdd:MTH00034 4 LRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 84 ANGASMFFICLFLHVGRGVYYGSYNMIETWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEW 163
Cdd:MTH00034 84 ANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 164 IWGGFSVDKATLTRFFAFHFILPFIVAALVLVHLLFLHETGSNNPSGLNSDADKIPFHPYYTIKDLLGVLILLMVLMILV 243
Cdd:MTH00034 164 IWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 244 LFFPDVLGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPLLHTSKQRGLTFRPITQT 323
Cdd:MTH00034 244 LLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQI 323
|
330 340 350
....*....|....*....|....*....|....*.
gi 2557454259 324 VYWILVSDLLILTWIGGQPVEYPFIIIGQAASIAYF 359
Cdd:MTH00034 324 AFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYF 359
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-359 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 563.37 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 1 MTIIRKKHPLIKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00145 2 LSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 81 YAHANGASMFFICLFLHVGRGVYYGSYNMIETWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160
Cdd:MTH00145 82 SLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKML 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 161 VEWIWGGFSVDKATLTRFFAFHFILPFIVAALVLVHLLFLHETGSNNPSGLNSDADKIPFHPYYTIKDLLGVLILLMVLM 240
Cdd:MTH00145 162 VEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLV 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 241 ILVLFFPDVLGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPLLHTSKQRGLTFRPI 320
Cdd:MTH00145 242 FLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPL 321
|
330 340 350
....*....|....*....|....*....|....*....
gi 2557454259 321 TQTVYWILVSDLLILTWIGGQPVEYPFIIIGQAASIAYF 359
Cdd:MTH00145 322 NQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYF 360
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-360 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 540.42 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 1 MTIIRKKHPLIKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIR 80
Cdd:MTH00016 2 FSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 81 YAHANGASMFFICLFLHVGRGVYYGSYNMIETWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160
Cdd:MTH00016 82 NLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKML 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 161 VEWIWGGFSVDKATLTRFFAFHFILPFIVAALVLVHLLFLHETGSNNPSGLNSDADKIPFHPYYTIKDLLGVLILLMVLM 240
Cdd:MTH00016 162 VQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 241 ILVLFFPDVLGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPLLHTSKQRGLTFRPI 320
Cdd:MTH00016 242 SVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPL 321
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2557454259 321 TQTVYWILVSDLLILTWIGGQPVEYPFIIIGQAASIAYFT 360
Cdd:MTH00016 322 NQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFF 361
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
4-359 |
6.60e-174 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 488.44 E-value: 6.60e-174
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 4 IRKKHPLIKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYAH 83
Cdd:MTH00022 3 LRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLH 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 84 ANGASMFFICLFLHVGRGVYYGSYNMIETWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEW 163
Cdd:MTH00022 83 ANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQW 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 164 IWGGFSVDKATLTRFFAFHFILPFIVAALVLVHLLFLHETGSNNPSGLNSDADKIPFHPYYTIKDLLGVLILLMVLMILV 243
Cdd:MTH00022 163 VWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIV 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 244 LFFPDVLGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPLLHTSKQRGLTFRPITQT 323
Cdd:MTH00022 243 YFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRM 322
|
330 340 350
....*....|....*....|....*....|....*.
gi 2557454259 324 VYWILVSDLLILTWIGGQPVEYPFIIIGQAASIAYF 359
Cdd:MTH00022 323 AFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYF 358
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
4-360 |
1.27e-173 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 487.89 E-value: 1.27e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 4 IRKKHPLIKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYAH 83
Cdd:MTH00224 5 FRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 84 ANGASMFFICLFLHVGRGVYYGSYNMIETWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEW 163
Cdd:MTH00224 85 ANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 164 IWGGFSVDKATLTRFFAFHFILPFIVAALVLVHLLFLHETGSNNPSGLNSDADKIPFHPYYTIKDLLGVLILLMVLMILV 243
Cdd:MTH00224 165 IWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 244 LFFPDVLGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPLLHTSKQRGLTFRPITQT 323
Cdd:MTH00224 245 LFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQL 324
|
330 340 350
....*....|....*....|....*....|....*..
gi 2557454259 324 VYWILVSDLLILTWIGGQPVEYPFIIIGQAASIAYFT 360
Cdd:MTH00224 325 LFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFS 361
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
4-359 |
9.28e-172 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 483.05 E-value: 9.28e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 4 IRKKHPLIKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYAH 83
Cdd:MTH00053 5 IRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLH 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 84 ANGASMFFICLFLHVGRGVYYGSYNMIETWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEW 163
Cdd:MTH00053 85 ANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRW 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 164 IWGGFSVDKATLTRFFAFHFILPFIVAALVLVHLLFLHETGSNNPSGLNSDADKIPFHPYYTIKDLLGVLILLMVLMILV 243
Cdd:MTH00053 165 VWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 244 LFFPDVLGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPLLHTSKQRGLTFRPITQT 323
Cdd:MTH00053 245 FLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKI 324
|
330 340 350
....*....|....*....|....*....|....*.
gi 2557454259 324 VYWILVSDLLILTWIGGQPVEYPFIIIGQAASIAYF 359
Cdd:MTH00053 325 LFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYF 360
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
16-359 |
2.80e-128 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 372.73 E-value: 2.80e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 16 HSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYAHANGASMFFICLF 95
Cdd:MTH00033 13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 96 LHVGRGVYYGSYNMIETWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATL 175
Cdd:MTH00033 93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 176 TRFFAFHFILPFIVAALVLVHLLFLHETGSNNPSGLNSDADKIPFHPYYTIKDLLGVLILLMVLMILVL--FFPDVLGDP 253
Cdd:MTH00033 173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIepRIETLLQDP 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 254 DNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPLLHTSKQRGLTFRPITQTVYWILVSDLL 333
Cdd:MTH00033 253 ENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFI 332
|
330 340
....*....|....*....|....*..
gi 2557454259 334 ILTWIGGQPV-EYPFIIIGQAASIAYF 359
Cdd:MTH00033 333 ILTWIGSAPAgADPYVLIGRIATIFYF 359
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
11-359 |
5.73e-116 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 341.77 E-value: 5.73e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 11 IKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYAHANGASMF 90
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 91 FICLFLHVGRGVYYGSY------NmietWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWI 164
Cdd:COG1290 100 FAAVYLHMFRGFFYGAYkkprelN----WIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWL 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 165 WGGFSVDKATLTRFFAFH-FILPFIVAALVLVHLLFLHETGSNNPSG----LNSDADKIPFHPYYTIKDLLGVLILLMVL 239
Cdd:COG1290 176 FGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGperkKTEKVDGVPFHPYYTVKDGFGFFVFLGVF 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 240 MILVLFFPDvlGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIP--NKLGGVLALILSILILAIMPLLHTSKQRGLTF 317
Cdd:COG1290 256 ALLAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRY 333
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2557454259 318 RPITQTVYWILVSDLLILTWIGGQPVEYpfIIIGQAASIAYF 359
Cdd:COG1290 334 RPVRTALGVAFIVFFIVLTILGANPPIA--TLLGSINTVTYF 373
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
12-359 |
2.13e-112 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 331.13 E-value: 2.13e-112
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 12 KIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYAHANGASMFF 91
Cdd:MTH00086 1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 92 ICLFLHVGRGVYYGSYNMIETWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVD 171
Cdd:MTH00086 81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 172 KATLTRFFAFHFILPFIVAALVLVHLLFLHETGSNNPSGLNSDADKIPFHPYYTIKDLLGvLILLMVLMILVLFFPDVLG 251
Cdd:MTH00086 161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYN-IIFWLVFIIFSLFYPFNLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 252 DPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPLLHTSKQrglTFRPITQTVYWILVSD 331
Cdd:MTH00086 240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNYTS---CLNKLNKFLVFSFIVV 316
|
330 340
....*....|....*....|....*...
gi 2557454259 332 LLILTWIGGQPVEYPFIIIGQAASIAYF 359
Cdd:MTH00086 317 NVILSWLGQCLVEYPFLFLSQIFSFIYF 344
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
9-206 |
2.57e-91 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 271.93 E-value: 2.57e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 9 PLIKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYAHANGAS 88
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 89 MFFICLFLHVGRGVYYGSYN--MIETWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWG 166
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 2557454259 167 GFSVDKATLTRFFAFHFILPFIVAALVLVHLLFLHETGSN 206
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
18-204 |
3.68e-84 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 253.46 E-value: 3.68e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 18 FIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYAHANGASMFFICLFLH 97
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 98 VGRGVYYG--SYNMIETWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATL 175
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 2557454259 176 TRFFAFHFILPFIVAALVLVHLLFLHETG 204
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
10-356 |
7.73e-84 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 258.37 E-value: 7.73e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 10 LIKIINHSFIDLPAPSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYAHANGASM 89
Cdd:MTH00046 1 MISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 90 FFICLFLHVGRGVYYGSYNMIETWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFS 169
Cdd:MTH00046 81 LFILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 170 VDKATLTRFFAFHFILPFIVAALVLVHLLFLHETGSNNP-SGLNSDADKIPFHPYYTIKDLLGVLILLMVLMILVLFFPD 248
Cdd:MTH00046 161 VTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPlFSSNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 249 VLGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILIlaimpLLHTSKQRGLTFRPITQTVYWIL 328
Cdd:MTH00046 241 LVLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLVLVLSFLFF-----LWVPTFNGSSVYSVWRQVNFWLI 315
|
330 340
....*....|....*....|....*...
gi 2557454259 329 VSDLLILTWIGGQPVEYPFIIIGQAASI 356
Cdd:MTH00046 316 VSLFFSLSYLGGCHPEYPYLLISQLFSV 343
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
207-354 |
1.82e-49 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 162.82 E-value: 1.82e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 207 NPSGLNSDADKIPFHPYYTIKDLLGVLILLMVLMILVLFFPDVLGDPDNFTPANPLNTPPHIKPEWYFLFAYAILRSIPN 286
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2557454259 287 KLGGVLALILSILILAIMPLLHTSKQRGlTFRPITQTVYWILVSDLLILTWIGGQPVEYPFIIIGQAA 354
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
258-358 |
3.53e-39 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 134.53 E-value: 3.53e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 258 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPLLHTSKQRGLTFRPITQTVYWILVSDLLILTW 337
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 2557454259 338 IGGQPVEYPFIIIGQAASIAY 358
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
33-191 |
1.14e-38 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 137.54 E-value: 1.14e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 33 FGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYAHANGASMFFICLFLHVGRGVYYGSYNMIE- 111
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 112 -TWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFH-FILPFIV 189
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
..
gi 2557454259 190 AA 191
Cdd:PRK03735 204 AV 205
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
88-253 |
1.85e-37 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 132.37 E-value: 1.85e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 88 SMFFICLFLHVGRGVYYGSYNMIE--TWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIW 165
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 166 GGFSVDKATLTRFFAFHF-ILPFIVAALVLVHLLFLHETGSNNPSGLNSDADKIPFHPYYTIKDLLGVLILLMVLMILVL 244
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 2557454259 245 FFPDVLGDP 253
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| petB |
CHL00070 |
cytochrome b6 |
24-191 |
7.40e-32 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 119.06 E-value: 7.40e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 24 PSNISSWWNFGSLLGLCLVIQILTGLFLAMHYTSDTSTAFSSVAHICRDVNYGWLIRYAHANGASMFFICLFLHVGRGVY 103
Cdd:CHL00070 27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 104 YGSYNMIE--TWNMGIVLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAF 181
Cdd:CHL00070 107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186
|
170
....*....|.
gi 2557454259 182 H-FILPFIVAA 191
Cdd:CHL00070 187 HtFVLPLLTAV 197
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
258-339 |
1.67e-08 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 53.26 E-value: 1.67e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 258 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPLLHTSKQRGLTF-RPITQTVYwiLVSDLLILt 336
Cdd:COG5679 66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENVNKFQNPFrRPVATAVF--LFGTLVTL- 142
|
...
gi 2557454259 337 WIG 339
Cdd:COG5679 143 WLG 145
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
258-327 |
7.24e-08 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 51.54 E-value: 7.24e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2557454259 258 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPLL-HTSKQRGLTFRPITQTVYWI 327
Cdd:CHL00058 65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMASVPAGLLTVPFLeNVNKFQNPFRRPVATTVFLI 135
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
258-339 |
2.02e-07 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 50.18 E-value: 2.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2557454259 258 PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILAIMPLLHTSKQRGLTF-RPITQTVYWIlvsDLLILT 336
Cdd:TIGR01156 65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATTVFLF---GTVVAL 141
|
...
gi 2557454259 337 WIG 339
Cdd:TIGR01156 142 WLG 144
|
|
| |
