|
Name |
Accession |
Description |
Interval |
E-value |
| sdhA_forward |
TIGR01816 |
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate ... |
27-590 |
0e+00 |
|
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate dehydrogenase and fumarate reductase are homologous enzymes reversible in principle but favored under different circumstances. This model represents a narrowly defined clade of the succinate dehydrogenase flavoprotein subunit as found in mitochondria, in Rickettsia, in E. coli and other Proteobacteria, and in a few other lineages. However, this model excludes all known fumarate reductases. It also excludes putative succinate dehydrogenases that appear to diverged before the split between E. coli succinate dehydrogenase and fumarate reductase. [Energy metabolism, TCA cycle]
Pssm-ID: 130875 [Multi-domain] Cd Length: 565 Bit Score: 1038.57 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 27 LAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIASADpNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGL 106
Cdd:TIGR01816 1 LAKGGVNTACVTKLFPTRSHTVAAQGGISAALGNME-EDNWRWHMYDTVKGSDWLGDQDAIEYMCKQAPEAVLELEHMGM 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 107 PFSRTETGRIYQRPFGGQSKDFGKGGQAARTCAAADRTGHALLHTLYQANLKNGTSFLNEWYAVDLVKNqDGAVVGIIAI 186
Cdd:TIGR01816 80 PFSRTEDGKIYQRPFGGHTRDFGKGGAAERACAAADRTGHAILHTLYQQNLKADTSFFNEYFALDLLME-DGECRGVIAY 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 187 CIETGETVYIRSKAVVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIEMWQFHPTGIAGAGVLVTEGCRGEGGY 266
Cdd:TIGR01816 159 CLETGEIHRFRAKAVVLATGGYGRIYFSTTNAHTLTGDGTGMVTRAGLPLQDMEFVQFHPTGIAGAGCLITEGCRGEGGI 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 267 LINAHGERFMERYAPNAKDLAGRDVVARSMVKEVLAGNGVGPNKDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVV 346
Cdd:TIGR01816 239 LINANGERFMERYAPTAKDLASRDVVSRSMTLEIREGRGVGPNKDHVYLDLDHLGPEVLEGRLPGISETARTFAGVDPVK 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 347 APIPVIPTCHYMMGGVATNIHGQAITqDANGNDQIVEGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLHLEKALK 426
Cdd:TIGR01816 319 DPIPVLPTVHYNMGGIPTNYHGQVLR-DGNGNDQIVPGLYAAGEAACVSVHGANRLGTNSLLDLVVFGRAAGLSAAEYAK 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 427 EGIDARGASESDLEASFKRLNGVNERTSGEEVAPLKRELQSCMQNYFGVFRTGEYMQKGIAQLADLRERIANVKINDKSQ 506
Cdd:TIGR01816 398 PGSDVKPMPPNAGEESVMRLDKLRFATGGERVAALRLELQRSMQNHAGVFRTGEVLQKGVEKISALKERYKNVKINDKSK 477
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 507 AFNTARIEALELQNLLEVAEATAIAAEHRKESRGAHAREDFEERDDENWLCHTLYFP----GEKRVSKRSVNFAPKTVPA 582
Cdd:TIGR01816 478 VWNTDLVEALELQNLLECAEATAVSAEARKESRGAHAREDFPERDDENWLKHTLSYVdintGKVLLSYKPVIFKPLTVAD 557
|
....*...
gi 489177895 583 FEPKVRTY 590
Cdd:TIGR01816 558 FEPKKRVY 565
|
|
| sdhA_frdA_Gneg |
TIGR01812 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial ... |
10-590 |
0e+00 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in Gram-negative bacteria, mitochondria, and some Archaea. Mitochondrial forms interact with ubiquinone and are designated EC 1.3.5.1, but can be degraded to 1.3.99.1. Some isozymes in E. coli and other species run primarily in the opposite direction and are designated fumarate reductase. [Energy metabolism, Aerobic, Energy metabolism, Anaerobic, Energy metabolism, TCA cycle]
Pssm-ID: 273815 [Multi-domain] Cd Length: 566 Bit Score: 917.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 10 DAIIVGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIASADPNDDWRWHMYDTVKGSDYIGDQDAIEY 89
Cdd:TIGR01812 1 DVVIVGAGLAGLRAAVEAAKAGLNTAVISKVYPTRSHTVAAQGGMAAALGNVDPDDSWEWHAYDTVKGSDYLADQDAVEY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 90 MCSVGPEAVFELEHMGLPFSRTETGRIYQRPFGGQSKDfgkggqaaRTCAAADRTGHALLHTLYQANLKNGTSFLNEWYA 169
Cdd:TIGR01812 81 MCQEAPKAILELEHWGVPFSRTPDGRIAQRPFGGHSKD--------RTCYAADKTGHALLHTLYEQCLKLGVSFFNEYFA 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 170 VDLVkNQDGAVVGIIAICIETGETVYIRSKAVVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIEMWQFHPTGI 249
Cdd:TIGR01812 153 LDLI-HDDGRVRGVVAYDLKTGEIVFFRAKAVVLATGGYGRIYKTTTNAHINTGDGMAMALRAGVPLKDMEFVQFHPTGL 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 250 AGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAGRDVVARSMVKEVLAGNGVG-PNKDHVLLKLDHLGEEVLHSR 328
Cdd:TIGR01812 232 YPSGILITEGCRGEGGYLVNKNGERFMERYAPEKMELAPRDVVSRAMWTEIREGRGVGsPPGDYVYLDLRHLGEEKIEER 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 329 LPGICELSKTFAHVDPVVAPIPVIPTCHYMMGGVATNIHGQAITQdangndQIVEGLFAVGEVACVSVHGANRLGGNSLL 408
Cdd:TIGR01812 312 LPQIRELAKYFAGVDPVKEPIPVRPTAHYSMGGIPTDYTGRVICE------TIVKGLFAAGECACVSVHGANRLGGNSLL 385
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 409 DLVVFGRAAGLHL-EKALKEGIDARGASESDLEASFKRLNGVNERTSGEEVAPLKRELQSCMQNYFGVFRTGEYMQKGIA 487
Cdd:TIGR01812 386 ELVVFGRIAGEAAaEYAAKTGNPAADIEEEAVKAEEALIDLLVESNGGERVAKIREELGDTMDDNVGIFRTEELLKKAVD 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 488 QLADLRERIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEHRKESRGAHAREDFEERDDENWLCHTLYF---PG 564
Cdd:TIGR01812 466 EIEELRERYKNVRINDKSKVFNTDLLEALELGNMLDLAEVVAAGALNRKESRGAHAREDYPERDDENWLKHTLAYydnPG 545
|
570 580
....*....|....*....|....*.
gi 489177895 565 EKRVSKRSVNFAPktvpaFEPKVRTY 590
Cdd:TIGR01812 546 TPRLEYKPVTITK-----YEPAERKY 566
|
|
| PTZ00139 |
PTZ00139 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional |
9-590 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Pssm-ID: 240286 [Multi-domain] Cd Length: 617 Bit Score: 807.81 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 9 FDAIIVGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIASADpNDDWRWHMYDTVKGSDYIGDQDAIE 88
Cdd:PTZ00139 30 YDAVVVGAGGAGLRAALGLVELGYKTACISKLFPTRSHTVAAQGGINAALGNMT-EDDWRWHAYDTVKGSDWLGDQDAIQ 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 89 YMCSVGPEAVFELEHMGLPFSRTETGRIYQRPFGGQSKDFGKGGQAARTCAAADRTGHALLHTLYQANLKNGTSFLNEWY 168
Cdd:PTZ00139 109 YMCREAPQAVLELESYGLPFSRTKDGKIYQRAFGGQSLKFGKGGQAYRCAAAADRTGHAMLHTLYGQSLKYDCNFFIEYF 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 169 AVDLVKNQDGAVVGIIAICIETGETVYIRSKAVVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIEMWQFHPTG 248
Cdd:PTZ00139 189 ALDLIMDEDGECRGVIAMSMEDGSIHRFRAHYTVIATGGYGRAYFSCTSAHTCTGDGGAMVSRAGLPLQDLEFVQFHPTG 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 249 IAGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAGRDVVARSMVKEVLAGNGVGPNKDHVLLKLDHLGEEVLHSR 328
Cdd:PTZ00139 269 IYGAGCLITEGCRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRAMTIEILEGRGCGPNKDHIYLDLTHLPPETLHER 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 329 LPGICELSKTFAHVDPVVAPIPVIPTCHYMMGGVATNIHGQAITQDANGNDQIVEGLFAVGEVACVSVHGANRLGGNSLL 408
Cdd:PTZ00139 349 LPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNWKTQVLTQRNGDDDKIVPGLLAAGEAACASVHGANRLGANSLL 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 409 DLVVFGRAAGLHLEKALKEGIDARGASESDLEASFKRLNGVNERTSGEEVAPLKRELQSCMQNYFGVFRTGEYMQKGIAQ 488
Cdd:PTZ00139 429 DIVVFGRAAANTVMEILKPGRPQPDLPKDAGEASIARLDKIRHNKGDISTAQIRKRMQRTMQKHAAVFRIGESLQEGVEK 508
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 489 LADLRERIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEHRKESRGAHAREDFEERDDENWLCHTLYF-----P 563
Cdd:PTZ00139 509 IKEIYSDFKDVKIKDKSLVWNTDLIETLELENLLTQAKQTILSAEARKESRGAHARDDFPERDDKNWMKHTLSYirdvkK 588
|
570 580 590
....*....|....*....|....*....|..
gi 489177895 564 GEKRVSKRSVNFAP-----KTVPafePKVRTY 590
Cdd:PTZ00139 589 GKVRLTYRPVITTPldnemETVP---PAKRVY 617
|
|
| PLN00128 |
PLN00128 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit |
8-590 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Pssm-ID: 177739 [Multi-domain] Cd Length: 635 Bit Score: 713.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 8 SFDAIIVGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIASADPnDDWRWHMYDTVKGSDYIGDQDAI 87
Cdd:PLN00128 50 TYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTE-DDWRWHMYDTVKGSDWLGDQDAI 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 88 EYMCSVGPEAVFELEHMGLPFSRTETGRIYQRPFGGQSKDFGKGGQAARTCAAADRTGHALLHTLYQANLKNGTSFLNEW 167
Cdd:PLN00128 129 QYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHAMLHTLYGQAMKHNTQFFVEY 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 168 YAVDLVKNQDGAVVGIIAICIETGETVYIRSKAVVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIEMWQFHPT 247
Cdd:PLN00128 209 FALDLIMDSDGACQGVIALNMEDGTLHRFRAHSTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPT 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 248 GIAGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAGRDVVARSMVKEVLAGNGVGPNKDHVLLKLDHLGEEVLHS 327
Cdd:PLN00128 289 GIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPEKDHIYLHLNHLPPEVLKE 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 328 RLPGICELSKTFAHVDPVVAPIPVIPTCHYMMGGVATNIHGQAITQDANGNDQIVEGLFAVGEVACVSVHGANRLGGNSL 407
Cdd:PLN00128 369 RLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTIKGDDPDAVVPGLMAAGEAACASVHGANRLGANSL 448
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 408 LDLVVFGRAAGLHLEKALKEGIDARGASESDLEASFKRLNGVNERTSGEEVAPLKRELQSCMQNYFGVFRTGEYMQKGIA 487
Cdd:PLN00128 449 LDIVVFGRACANRVAEIAKPGEKQKPLPKDAGEKTIAWLDKLRNANGSLPTSKIRLNMQRVMQNNAAVFRTQETLEEGCK 528
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 488 QLADLRERIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEHRKESRGAHAREDFEERDDENWLCHTL-YFPGEK 566
Cdd:PLN00128 529 LIDEAWDSFHDVKVTDRSLIWNSDLIETLELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLgYWEEGK 608
|
570 580
....*....|....*....|....*..
gi 489177895 567 -RVSKRSVNFAP--KTVPAFEPKVRTY 590
Cdd:PLN00128 609 vRLDYRPVHMNTldDEVETFPPKARVY 635
|
|
| sdhA |
PRK06069 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
35-590 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 235689 [Multi-domain] Cd Length: 577 Bit Score: 591.65 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 35 AVVTKVFPTRSHTVSAQGGiTCAIASADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTETG 114
Cdd:PRK06069 35 AVVSKTQPMRSHSVSAEGG-TAAVLYPEKGDSFDLHAYDTVKGSDFLADQDAVEVFVREAPEEIRFLDHWGVPWSRRPDG 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 115 RIYQRPFGGQSKdfgkggqaARTCAAADRTGHALLHTLYQANLK-NGTSFLNEWYAVDLVKnQDGAVVGIIAICIETGET 193
Cdd:PRK06069 114 RISQRPFGGMSF--------PRTTFAADKTGFYIMHTLYSRALRfDNIHFYDEHFVTSLIV-ENGVFKGVTAIDLKRGEF 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 194 VYIRSKAVVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIEMWQFHPTGIAGAGVLVTEGCRGEGGYLINAHGE 273
Cdd:PRK06069 185 KVFQAKAGIIATGGAGRLYGFTTYAHSVTGDGLAIAYRAGIPLKDMEFVQFHPTGLVPSGILITEAARGEGGYLINKEGE 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 274 RFMERYAPNAKDLAGRDVVARSMVKEVLAGNGV--GPNKDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPIPV 351
Cdd:PRK06069 265 RFMKRYAPQKMELAPRDVVSRAIMTEIMEGRGFkhESGLCYVGLDLRHLGEEKINERLPLIREIAKKYAGIDPVTEPIPV 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 352 IPTCHYMMGGVATNIHGQAITQDAngndQIVEGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGlhlEKALK--EGI 429
Cdd:PRK06069 345 RPAAHYTMGGIHTDVYGRVLTADG----EWVRGLWAAGEAAAVSVHGANRLGSNSTAECLVWGRIAG---EQAAEyaLKR 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 430 DARGASESDLEAS-----FKRLNGvneRTSGEEVAPLKRELQSCMQNYFGVFRTGEYMQKGIAQLADLRERIANVKINDK 504
Cdd:PRK06069 418 PAPSSPVEKLAEKeekriFDKLLK---KEGGEPSYEIRRELNDIMDKNFGIFRDESGLAEALKKIKKLRERYKNVRIEDK 494
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 505 SQAFNTARIEALELQNLLEVAEATAIAAEHRKESRGAHAREDFEERDDENWLCHTLYF--PGEKRVSkrsvnFAPKTVPA 582
Cdd:PRK06069 495 SRIYNTDLKDALELDGMLDLAEVVAIGALLRTESRGAHYRLDYPKRDDENWLKHTLAYytGGGPKVT-----YTPVTITK 569
|
....*...
gi 489177895 583 FEPKVRTY 590
Cdd:PRK06069 570 WKPEERKY 577
|
|
| sdhA |
PRK05945 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
33-590 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 180319 [Multi-domain] Cd Length: 575 Bit Score: 557.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 33 KTAVVTKVFPTRSHTVSAQGGITCAIASADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTE 112
Cdd:PRK05945 30 DVAVVAKTHPIRSHSVAAQGGIAASLKNVDPEDSWEAHAFDTVKGSDYLADQDAVAILTQEAPDVIIDLEHLGVLFSRLP 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 113 TGRIYQRPFGGQSKDfgkggqaaRTCAAADRTGHALLHTLYQANLKNGTSFLNEWYAVDLVKnQDGAVVGIIAICIETGE 192
Cdd:PRK05945 110 DGRIAQRAFGGHSHN--------RTCYAADKTGHAILHELVNNLRRYGVTIYDEWYVMRLIL-EDNQAKGVVMYHIADGR 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 193 TVYIRSKAVVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIEMWQFHPTGIAGAGVLVTEGCRGEGGYLINAHG 272
Cdd:PRK05945 181 LEVVRAKAVMFATGGYGRVFNTTSNDYASTGDGLAMTAIAGLPLEDMEFVQFHPTGLYPVGVLISEAVRGEGAYLINSEG 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 273 ERFMERYAPNAKDLAGRDVVARSMVKEVLAGNGVGPN----KDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAP 348
Cdd:PRK05945 261 DRFMADYAPSRMELAPRDITSRAITLEIRAGRGINPDgsagGPFVYLDLRHMGKEKIMSRVPFCWEEAHRLVGVDAVTEP 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 349 IPVIPTCHYMMGGVATNIHGQAItqdaNGNDQIVEGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGlhleKALKEG 428
Cdd:PRK05945 341 MPVRPTVHYCMGGIPVNTDGRVR----RSADGLVEGFFAAGECACVSVHGANRLGSNSLLECVVYGRRTG----AAIAEY 412
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 429 IDARGASESD----LEASFKRLNGVNERTSGEEVAPLKRELQSCMQNYFGVFRTGEYMQKGIAQLADLRERIANVKINDK 504
Cdd:PRK05945 413 VQGRKLPEVDeqryLKEAKQRIQALLDQSGTYRINQLRQQFQDCMTDHCGVFRTEEIMQEGLEKIQQLKQQYEQIYLDDK 492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 505 SQAFNTARIEALELQNLLEVAEATAIAAEHRKESRGAHAREDFEERDDENWLCHTL--YFPGEKRVSKRsvnfaPKTVPA 582
Cdd:PRK05945 493 GKCWNTELIEALELRSLMVVGEIILTSALNRQESRGAHSREDYPQRDDQNFLKHTLayYSPAGIDIQYM-----PVVITM 567
|
....*...
gi 489177895 583 FEPKVRTY 590
Cdd:PRK05945 568 FEPQERKY 575
|
|
| PRK09231 |
PRK09231 |
fumarate reductase flavoprotein subunit; Validated |
33-590 |
0e+00 |
|
fumarate reductase flavoprotein subunit; Validated
Pssm-ID: 236421 [Multi-domain] Cd Length: 582 Bit Score: 541.15 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 33 KTAVVTKVFPTRSHTVSAQGGitcAIASADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTE 112
Cdd:PRK09231 31 KIALISKVYPMRSHTVAAEGG---SAAVAQDHDSFDYHFHDTVAGGDWLCEQDVVEYFVHHCPTEMTQLEQWGCPWSRKP 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 113 TGRIYQRPFGGQSKDfgkggqaaRTCAAADRTGHALLHTLYQANLKNGT-SFLNEWYAVDLVKNqDGAVVGIIAICIETG 191
Cdd:PRK09231 108 DGSVNVRRFGGMKIE--------RTWFAADKTGFHMLHTLFQTSLKYPQiQRFDEHFVLDILVD-DGHVRGLVAMNMMEG 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 192 ETVYIRSKAVVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIEMWQFHPTGIAGAGVLVTEGCRGEGGYLINAH 271
Cdd:PRK09231 179 TLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAYRHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKD 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 272 GERFMERYA---------PNAK--DLAGRDVVARSMVKEVLAGNGV-GPNKDHVLLKLDHLGEEVLHSRLPGICELSKTF 339
Cdd:PRK09231 259 GYRYLQDYGlgpetplgePKNKymELGPRDKVSQAFWHEWRKGNTIsTPRGDVVYLDLRHLGEKKLHERLPFICELAKAY 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 340 AHVDPVVAPIPVIPTCHYMMGGVATNIHGQAitqdangndqIVEGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGl 419
Cdd:PRK09231 339 VGVDPVKEPIPVRPTAHYTMGGIETDQNCET----------RIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAG- 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 420 hlEKALKEGIDARGASESDLEASFK----RLNGVNERTSGEEVAPLKRELQSCMQNYFGVFRTGEYMQKGIAQLADLRER 495
Cdd:PRK09231 408 --EQAAERAATAGPGNEAALDAQAAdveqRLKALVNQEGGENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKER 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 496 IANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEHRKESRGAHARED--FEERDDENWLCHTLYFPGEKRVSKrsV 573
Cdd:PRK09231 486 FKRVRITDTSSVFNTDLLYTIELGYGLDVAECMAHSALARKESRGAHQRLDegCTERDDVNFLKHTLAFYNADGTPR--I 563
|
570
....*....|....*..
gi 489177895 574 NFAPKTVPAFEPKVRTY 590
Cdd:PRK09231 564 EYSDVKITKSPPAKRVY 580
|
|
| sdhA |
PRK06452 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
7-590 |
8.86e-168 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 180567 [Multi-domain] Cd Length: 566 Bit Score: 489.01 E-value: 8.86e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 7 LSFDAIIVGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAI-ASADPNDDWRWHMYDTVKGSDYIGDQD 85
Cdd:PRK06452 4 IEYDAVVIGGGLAGLMSAHEIASAGFKVAVISKVFPTRSHSAAAEGGIAAYIpGNSDPNDNPDYMTYDTVKGGDYLVDQD 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 86 AIEYMCSVGPEAVFELEHMGLPFSRTETGRIYQRPFGGQSkdfgkggqAARTCAAADRTGHALLHTLYQANLKNGTSFLN 165
Cdd:PRK06452 84 AAELLSNKSGEIVMLLERWGALFNRQPDGRVAVRYFGGQT--------YPRTRFVGDKTGMALLHTLFERTSGLNVDFYN 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 166 EWYAVDLVKNqDGAVVGIIAICIETGETVYIRSKAVVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIEMWQFH 245
Cdd:PRK06452 156 EWFSLDLVTD-NKKVVGIVAMQMKTLTPFFFKTKAVVLATGGMGMLYRHTTNSYINTGDGFGIALRAGAALKDPEFVQFH 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 246 PTGIAGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAGRDVVARSMVKEVLAGNGVgPNkDHVLLKLDHLGEEVL 325
Cdd:PRK06452 235 PTALYPSDVLISEAARGEGGILKNVKGERFMTKYAPKKLDLAPRDIVSRAIITEIREGRGF-PG-GYVGLDLTHLGEEYI 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 326 HSRLPGICELSKTFAHVDPVVAPIPVIPTCHYMMGGVATNIhgqaitqdaNGNDQIVEGLFAVGEVACVSVHGANRLGGN 405
Cdd:PRK06452 313 KERLALAVEAAKSFAGVDAFTEPIPVRPAQHYYMGGIDVDI---------DGRNPDIVGLFSAGEAACVSVHGANRLGSN 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 406 SLLDLVVFGRAAGLHLEKALKEGIDARGAS-ESDLEASFKRLNGVNERTSGEEVAPLKRELQSCMQNYFGVFRTGEYMQK 484
Cdd:PRK06452 384 SLLDTLVFGQVTGRTVVQFLKSNPGNPTSNyEKEAEKVVDDAYKFVKSESGVHFGQILEKLRDTMWDYVGIYRDEGGLLN 463
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 485 GIAQLADLRERIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEHRKESRGAHAREDFEERDDENWLCHTL-YFP 563
Cdd:PRK06452 464 AMSEINKLRGMISNMYVTDKSKVYNTEFFNALELRNMLDLALVIAKSALERKESRGAHYRTDYPDRDDNNWLKHTIaYLR 543
|
570 580
....*....|....*....|....*..
gi 489177895 564 GEkrvsKRSVNFAPKTVPAFEPKVRTY 590
Cdd:PRK06452 544 GN----TVEVTFKPVKITRWKPEPRVY 566
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
25-565 |
5.90e-166 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 482.68 E-value: 5.90e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 25 LQLAQGGhKTAVVTKVFPTRSHTVSAQGGITCAIasaDPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHM 104
Cdd:COG0029 21 LKLAERG-RVTLLTKGELGESNTRWAQGGIAAVL---DPGDSPELHIADTLAAGAGLCDPEAVRVLVEEGPERIRELIEL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 105 GLPFSRTETGRIYQRPFGGQSKdfgkggqaARTCAAADRTGHALLHTLYQANLKN-GTSFLNEWYAVDLVKNQDGAVVGI 183
Cdd:COG0029 97 GVPFDRDEDGELALTREGGHSR--------RRILHAGDATGREIERALLEAVRAHpNITVLENHFAVDLITDADGRCVGA 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 184 IAICIETGETVYIRSKAVVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIEMWQFHPTGIAGAGV---LVTEGC 260
Cdd:COG0029 169 YVLDEKTGEVETIRAKAVVLATGGAGQLYAYTTNPDVATGDGIAMAYRAGARLADMEFVQFHPTALYHPGApsfLISEAV 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 261 RGEGGYLINAHGERFMERYAPNAkDLAGRDVVARSMVKEVLAGNGvgpnkDHVLLKLDHLGEEVLHSRLPGICELSKTFa 340
Cdd:COG0029 249 RGEGAVLRNADGERFMPDYHPRA-ELAPRDVVARAIDAEMKKTGG-----DCVYLDISHLDAEFIRERFPTIYARCLEL- 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 341 HVDPVVAPIPVIPTCHYMMGGVATNIHGQaiTQdangndqiVEGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH 420
Cdd:COG0029 322 GIDITKEPIPVAPAAHYTMGGVATDLDGR--TS--------IPGLYAVGEVACTGVHGANRLASNSLLEGLVFGRRAAED 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 421 LEKALKEGIDARGASESDleasfkrlNGVNERTSGEEVAPLKRELQSCMQNYFGVFRTGEYMQKGIAQLADLRERIANVK 500
Cdd:COG0029 392 IAARLAESPLPPEIPEWD--------ESVTDPDEEVLIAHLRDELRRLMWDYVGIVRTAKGLERALRRLELLREEIEEYA 463
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 489177895 501 INDKSQafntariEALELQNLLEVAEATAIAAEHRKESRGAHAREDFEERDDEnWLCHTLYFPGE 565
Cdd:COG0029 464 NFRVSR-------DLLELRNLLLVAELIVRAALARKESRGAHYRSDYPETDPA-WRRHTVLRLDD 520
|
|
| sdhA |
PRK06263 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
47-571 |
4.12e-140 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 235758 [Multi-domain] Cd Length: 543 Bit Score: 417.46 E-value: 4.12e-140
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 47 TVSAQGGITcaiASADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTETGRIYQRPFGGQSK 126
Cdd:PRK06263 46 TVMAEGGYN---AVLNPEDSFEKHFEDTMKGGAYLNDPKLVEILVKEAPKRLKDLEKFGALFDRTEDGEIAQRPFGGQSF 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 127 dfgkggqaARTCAAADRTGHALLHTLYQANLKNGTSFLNEWYAVDLVKNQDGAVVGIIAICIETGETVYIRSKAVVLATG 206
Cdd:PRK06263 123 --------NRTCYAGDRTGHEMMMGLMEYLIKERIKILEEVMAIKLIVDENREVIGAIFLDLRNGEIFPIYAKATILATG 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 207 GAGRIYASTTNALINTGDGVGMALRAGVPVQDIEMWQFHPTGI----AGAGVLVTEGCRGEGGYLINAHGERFMERYAPN 282
Cdd:PRK06263 195 GAGQLYPITSNPIQKTGDGFAIAYRAGAELIDMEMVQFHPTGMvypySGRGILVTEAVRGEGGILYNKNGERFMKRYDPE 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 283 AKDLAGRDVVARSMVKEVLAGNGVgpNKDHVLLKLDHLGEEVLHSRLPGICELSKTFAhVDPVVAPIPVIPTCHYMMGGV 362
Cdd:PRK06263 275 RMELSTRDVVARAIYTEIQEGRGT--NHGGVYLDVTHLPDEVIEEKLETMLEQFLDVG-VDIRKEPMEVAPTAHHFMGGI 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 363 atnihgqAITQDANGNdqiVEGLFAVGEVACvSVHGANRLGGNSLLDLVVFGRAAGL-----HLEKALKEGIDARGASES 437
Cdd:PRK06263 352 -------RINEDCETN---IPGLFACGEVAG-GVHGANRLGGNALADTQVFGAIAGKsaaknAENNEFKKVNRSVEEDIA 420
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 438 DLEASFKRLNGvnertsGEEVAPLKRELQSCMQNYFGVFRTGEYMQKGIAQLADLRERIANVKINDKSQaFNtariEALE 517
Cdd:PRK06263 421 RIKSEIKFLNG------SINPYDLIDELKKTMWDYVSIVRNEKGLKKALEEINELKEKLKDLKVNGIVD-FN----KALE 489
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 489177895 518 LQNLLEVAEATAIAAEHRKESRGAHAREDFEERDDEnWLCHTLYFPGEKRVSKR 571
Cdd:PRK06263 490 LENMILVAELVIKSALLRKESRGAHYREDYPETNDE-WFGNIILNKNKIKFEKR 542
|
|
| PRK08626 |
PRK08626 |
fumarate reductase flavoprotein subunit; Provisional |
28-590 |
2.30e-139 |
|
fumarate reductase flavoprotein subunit; Provisional
Pssm-ID: 181507 [Multi-domain] Cd Length: 657 Bit Score: 419.38 E-value: 2.30e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 28 AQGGHKTAVVTKVFPTRSHTVSAQGGITCAIASA--DPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMG 105
Cdd:PRK08626 25 AQRGLDTIVLSLVPAKRSHSAAAQGGMQASLGNAvkGEGDNEDVHFADTVKGSDWGCDQEVARMFVHTAPKAVRELAAWG 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 106 LPFSR-----------------TET----GRIYQRPFGGQSKdfgkggqaARTCAAADRTGHALLHTLYQANLKNGTSFL 164
Cdd:PRK08626 105 VPWTRvtagprtvvingekvtiTEKeeahGLINARDFGGTKK--------WRTCYTADGTGHTMLYAVDNEAIKLGVPVH 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 165 NEWYAVDLVkNQDGAVVGIIAICIETGETVYIRSKAVVLATGGAGRIYASTTNALINTGDGVGMALRAGV-PVQDIEMWQ 243
Cdd:PRK08626 177 DRKEAIALI-HDGKRCYGAVVRCLITGELRAYVAKATLIATGGYGRIYKVTTNAVICEGIGAAIALETGVaPLGNMEAVQ 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 244 FHPTGIAGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAGRDVVARSMVKEVLAGNGV-GPNKDHVLLKLDHLGE 322
Cdd:PRK08626 256 FHPTAIVPSGILVTEGCRGDGGLLRDKDGYRFMPDYEPEKKELASRDVVSRRMTEHIRKGKGVkSPYGPHLWLDIRILGR 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 323 EVLHSRLPGICELSKTFAHVDPVVAPIPVIPTCHYMMGGVATNIHGQAITqdangndqiVEGLFAVGEVACVSVHGANRL 402
Cdd:PRK08626 336 KHIETNLREVQEICENFLGIDPAKDWIPVRPTQHYSMGGIRTNPTGESYG---------LKGLFSAGEAACWDMHGFNRL 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 403 GGNSLLDLVVFGRAAGLHLEKALKE---GIDArGASESDLEASFKRLNGVNERTSGEEVAPLKRELQSCMQNYFGVFRTG 479
Cdd:PRK08626 407 GGNSLAETVVAGMIVGKYVADFCLGnelEIDT-ALVEKFVKKQQDRIDELIAGEGKENVFEIKNEMQEIMMEKVGIFRNG 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 480 EYMQKGIAQLADLRERIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEHRKESRGAHAREDFEERDDENWLCHT 559
Cdd:PRK08626 486 PELEKAVKELQELLERSKNIGLKSKKRGANPELEEALRVPRMLKLALCVAYGALARTESRGAHAREDYPKRNDRDWLNRT 565
|
570 580 590
....*....|....*....|....*....|...
gi 489177895 560 LYFPGEKRVSKRSVNFAPKTVPAFE--PKVRTY 590
Cdd:PRK08626 566 LASWPEGEALEPTLEYEPLDVMKMElpPGFRGY 598
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
25-427 |
8.42e-139 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 410.38 E-value: 8.42e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 25 LQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCA---IASADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFEL 101
Cdd:COG1053 20 LEAAEAGLKVLVLEKVPPRGGHTAAAQGGINAAgtnVQKAAGEDSPEEHFYDTVKGGDGLADQDLVEALAEEAPEAIDWL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 102 EHMGLPFSRTETGRIYQrpFGGQSkdfgkggqAARTCAAADRTGHALLHTLYQANLKNGTSFLNEWYAVDLVKNqDGAVV 181
Cdd:COG1053 100 EAQGVPFSRTPDGRLPQ--FGGHS--------VGRTCYAGDGTGHALLATLYQAALRLGVEIFTETEVLDLIVD-DGRVV 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 182 GIIAICiETGETVYIRSKAVVLATGGAGRIYAS------------TTNALINTGDGVGMALRAGVPVQDIEMWQFHPTGI 249
Cdd:COG1053 169 GVVARD-RTGEIVRIRAKAVVLATGGFGRNYEMraeylpeaegalSTNAPGNTGDGIAMALRAGAALADMEFVQFHPTGL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 250 AGAGVLVTEGCRG-EGGYLINAHGERFMERYAPnakdlagRDVVARSMVKEVLAGNgvgpnkdHVLLKLDHLGE------ 322
Cdd:COG1053 248 PGDGGLISEGARGkPGGILVNKEGERFMNEYAP-------RDVVSRAILEEIDEPA-------YLVLDLRHRRRleeyle 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 323 -------EVLHsRLPGIC-----ELSKTF--------AHVDPVVA-----------PIPVIPTCHYMMGGVATNIHGQAI 371
Cdd:COG1053 314 agylvkaDTIE-ELAAKLgidaaELAATVarynaaakAGVDPRGTclgpikegpfyAIPVRPGVHYTMGGLRVDADARVL 392
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 489177895 372 TQDangnDQIVEGLFAVGEvACVSVHGANRLGGNSLLDLVVFGRAAGLHLEKALKE 427
Cdd:COG1053 393 DAD----GTPIPGLYAAGE-AAGSVHGANRLGGNSLGDALVFGRIAGRHAAEYAKA 443
|
|
| sdhA |
PRK07803 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
1-555 |
3.53e-124 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236101 [Multi-domain] Cd Length: 626 Bit Score: 379.38 E-value: 3.53e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 1 MASIRTLSFDAIIVGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIASADPNDDWRWHMYDTVKGSDY 80
Cdd:PRK07803 1 MTEVERHSYDVVVIGAGGAGLRAAIEARERGLRVAVVCKSLFGKAHTVMAEGGCAAAMGNVNPKDNWQVHFRDTMRGGKF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 81 IGDQDAIEYMCSVGPEAVFELEHMGLPFSRTETGRIYQRPFGGQSkdfgkggqAARTCAAADRTGHALLHTL-------- 152
Cdd:PRK07803 81 LNNWRMAELHAKEAPDRVWELETYGALFDRTKDGRISQRNFGGHT--------YPRLAHVGDRTGLELIRTLqqkivslq 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 153 ---------YQANLKngtsFLNEWYAVDLVKnQDGAVVGIIAICIETGETVYIRSKAVVLATGGAGRIYASTTNALINTG 223
Cdd:PRK07803 153 qedhaelgdYEARIK----VFAECTITELLK-DGGRIAGAFGYWRESGRFVLFEAPAVVLATGGIGKSFKVTSNSWEYTG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 224 DGVGMALRAGVPVQDIEMWQFHPTGI----AGAGVLVTEGCRGEGGYLINAHGERFMERYAP------------------ 281
Cdd:PRK07803 228 DGHALALRAGATLINMEFVQFHPTGMvwppSVKGILVTEGVRGDGGVLKNSEGKRFMFDYIPdvfkgqyaeteeeadrwy 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 282 ----NAK---DLAGRDVVARSMVKEVLAGNGvgpnKDHVLLKLD---HLGEEVLHSRLPGICELSKTFAHVDPVVAPIPV 351
Cdd:PRK07803 308 kdndNNRrppELLPRDEVARAINSEVKAGRG----SPHGGVYLDiasRLPAEEIKRRLPSMYHQFKELADVDITKEPMEV 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 352 IPTCHYMMGGVATnihgqaitqDANGNDQIVEGLFAVGEVACvSVHGANRLGGNSLLDLVVFGRAAGLHLEKALkEGIDA 431
Cdd:PRK07803 384 GPTCHYVMGGVEV---------DPDTGAATVPGLFAAGECAG-GMHGSNRLGGNSLSDLLVFGRRAGLGAADYV-RGLGS 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 432 RGA-SESDLEASFKRLNGVNERTSGEEvAP--LKRELQSCMQNYFGVFRTGEYMQKGIAQLADLRERIANVKInDKSQAF 508
Cdd:PRK07803 453 RPAvSEEAVDAAAREALAPFERPAGAE-NPytLHAELQQTMNDLVGIIRKEDEIEQALEKLAELKERAANVSV-EGHRQY 530
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 489177895 509 NTARIEALELQNLLEVAEATAIAAEHRKESRGAHAREDFEERdDENW 555
Cdd:PRK07803 531 NPGWHLALDLRNMLLVSECVARAALERTESRGGHTRDDHPGM-DPEW 576
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
25-407 |
2.63e-118 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 356.21 E-value: 2.63e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 25 LQLAQGGHKTAVVTKVFPTRSHTVSAQGGItcAIAS---ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFEL 101
Cdd:pfam00890 16 LAAAEAGLKVAVVEKGQPFGGATAWSSGGI--DALGnppQGGIDSPELHPTDTLKGLDELADHPYVEAFVEAAPEAVDWL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 102 EHMGLPFSRTETGRIYQRPFGGQSKDfgkggqaARTCA-AADR-----TGHALLHTLYQANLKNGTSFLNEWYAVDLVKN 175
Cdd:pfam00890 94 EALGVPFSRTEDGHLDLRPLGGLSAT-------WRTPHdAADRrrglgTGHALLARLLEGLRKAGVDFQPRTAADDLIVE 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 176 qDGAVVGIIAICIETGETVYIRSK-AVVLATGGAGR---------IYASTTNALINTGDGVGMALRAGVPVQDIEMW--Q 243
Cdd:pfam00890 167 -DGRVTGAVVENRRNGREVRIRAIaAVLLATGGFGRlaelllpaaGYADTTNPPANTGDGLALALRAGAALTDDLMEfvQ 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 244 FHPTGIAGAG---VLVTEGCRGEGGYLINAHGERFMeryapnaKDLAGRDVVARSMVKEVLAgngvGPNKDHVLLKLDH- 319
Cdd:pfam00890 246 FHPTSLVGIRlgsGLLIEALRGEGGILVNKDGRRFM-------NELASRDVVSRAITRNEID----EGRGANVYLDASGs 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 320 LGEEVLHSRLPGICELSKTFAHVDPVVAPIPVIPTCHYMMGGVATNIHGQAItqdaNGNDQIVEGLFAVGEVACVSVHGA 399
Cdd:pfam00890 315 LDAEGLEATLPAINEEAIFGLDVDPYDRPIPVFPAQHYTMGGVRTDENGRVL----DADGQPIPGLYAAGEVACGGVHGA 390
|
....*...
gi 489177895 400 NRLGGNSL 407
Cdd:pfam00890 391 NRLGGNSL 398
|
|
| PLN02815 |
PLN02815 |
L-aspartate oxidase |
25-552 |
6.63e-113 |
|
L-aspartate oxidase
Pssm-ID: 215436 [Multi-domain] Cd Length: 594 Bit Score: 349.40 E-value: 6.63e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 25 LQLAQGGhKTAVVTKVFPTRSHTVSAQGGITcaiASADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHM 104
Cdd:PLN02815 46 LEVAEYG-TVAIITKDEPHESNTNYAQGGVS---AVLDPSDSVESHMRDTIVAGAFLCDEETVRVVCTEGPERVKELIAM 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 105 GLPFSRTETGRIYQRPFGGQSKDfgkggqaaRTCAAADRTGHALLHTLYQANLKN-GTSFLNEWYAVDLVKNQDGA---V 180
Cdd:PLN02815 122 GASFDHGEDGNLHLAREGGHSHH--------RIVHAADMTGREIERALLEAVKNDpNITFFEHHFAIDLLTSQDGGsivC 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 181 VGIIAICIETGETVYIRSKAVVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIEMWQFHPTGIAGAGV------ 254
Cdd:PLN02815 194 HGADVLDTRTGEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGIAMAHRAQAVVSNMEFVQFHPTALADEGLpikpak 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 255 ------LVTEGCRGEGGYLINAHGERFMERYAPNAkDLAGRDVVARSMVKEVLAGngvgpNKDHVLLKLDHL-GEEVLHs 327
Cdd:PLN02815 274 arenafLITEAVRGDGGILYNLAGERFMPLYDERA-ELAPRDVVARSIDDQLKKR-----NEKYVLLDISHKpREEILS- 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 328 RLPGIC-ELSKTfaHVDPVVAPIPVIPTCHYMMGGVATNIHGQAitqdangndqIVEGLFAVGEVACVSVHGANRLGGNS 406
Cdd:PLN02815 347 HFPNIAaECLKR--GLDITKQPIPVVPAAHYMCGGVRTGLQGET----------NVQGLYAAGEVACTGLHGANRLASNS 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 407 LLDLVVFGRAA----GLHLEKALKEGIDARGASESDLEASFKR--LNGVNERTsgeevAPLKRELQSCMQNYFGVFRTGE 480
Cdd:PLN02815 415 LLEALVFARRAvqpsIDHMARALRDVSAAAAWARPVAPTALADsvMDEILEWT-----AVVRKELQRIMWNYVGIVRSTE 489
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 489177895 481 YMQKGIAQLADLRERiANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEHRKESRGAHAREDFEERDD 552
Cdd:PLN02815 490 RLETAERKLEELEAE-WEAILFRHGWKPTMVGLEACEMRNLFCVAKLVVSSALARKESRGLHYTTDYPELVE 560
|
|
| PRK07395 |
PRK07395 |
L-aspartate oxidase; Provisional |
8-560 |
7.52e-102 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236010 [Multi-domain] Cd Length: 553 Bit Score: 319.30 E-value: 7.52e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 8 SFDAIIVGGGGAGMRAALQLAQggH-KTAVVTKVFPTRSHTVSAQGGITCAIAsadPNDDWRWHMYDTVKGSDYIGDQDA 86
Cdd:PRK07395 9 QFDVLVVGSGAAGLYAALCLPS--HlRVGLITKDTLKTSASDWAQGGIAAAIA---PDDSPKLHYEDTLKAGAGLCDPEA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 87 IEYMCSVGPEAVFELEHMGLPFSRtetgriyqrpfggqskdfgKGGQAARTCAAA----------DRTGHALLHTLY-QA 155
Cdd:PRK07395 84 VRFLVEQAPEAIASLVEMGVAFDR-------------------HGQHLALTLEAAhsrprvlhaaDTTGRAIVTTLTeQV 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 156 NLKNGTSFLNEWYAVDL-VKNQDGAVVGIIaiCIETGETVYIRSKAVVLATGGAGRIYASTTNALINTGDGVGMALRAGV 234
Cdd:PRK07395 145 LQRPNIEIISQALALSLwLEPETGRCQGIS--LLYQGQITWLRAGAVILATGGGGQVFAQTTNPAVSTGDGVALAWRAGA 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 235 PVQDIEMWQFHPTGIAGAGV---LVTEGCRGEGGYLINAHGERFMERYAPnAKDLAGRDVVARSMVKEvLAGNGVGPNKD 311
Cdd:PRK07395 223 QLRDLEFFQFHPTALTKPGAprfLISEAVRGEGAHLVDAQGRRFAFDYHP-AGELAPRDVVSRAIFSH-LQKTATDPATA 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 312 HVLLKLDHLGEEVLHSRLPGICELSKTFAhVDPVVAPIPVIPTCHYMMGGVATNIHGQAitqdangndqIVEGLFAVGEV 391
Cdd:PRK07395 301 HVWLDLRPIPAERIRRRFPNIIRVCQKWG-IDVFQEPIPVAPAAHYWMGGVVTDLNNQT----------SIPGLYAVGET 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 392 ACVSVHGANRLGGNSLLDLVVFG-RAAGLHLEKALKEGIDARGASESDLEAsfkrlngvNERTSGEEVAPLKRELQSCMQ 470
Cdd:PRK07395 370 ASTGVHGANRLASNSLLECLVFAaQLAQLELPIEPPASPDLPPISFIIDAS--------QWKNEQEQIQRIRQELPELVW 441
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 471 NYFGVFRTGEYMQKGIAQLADLRERIANVKIN--------DKSQAFNTARIEA-----LELQNLLEVAEATAIAAEHRKE 537
Cdd:PRK07395 442 QSAGICREADTLERAIAQVEQWQQQLAALPLSqflanlppGQTVSFNGPDAEQqlrlwAETRNLLDIAYLILKSALFRTE 521
|
570 580
....*....|....*....|...
gi 489177895 538 SRGAHAREDFEErDDENWLCHTL 560
Cdd:PRK07395 522 SRGGHYRLDYPQ-TDPAWQVHTL 543
|
|
| nadB |
TIGR00551 |
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase ... |
8-547 |
3.88e-101 |
|
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]
Pssm-ID: 273131 [Multi-domain] Cd Length: 489 Bit Score: 315.20 E-value: 3.88e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 8 SFDAIIVGGGGAGMRAALQLAqGGHKTAVVTKVFPTRSHTVSAQGGITCAIAsadPNDDWRWHMYDTVKGSDYIGDQDAI 87
Cdd:TIGR00551 2 EMDVVVIGSGAAGLSAALALA-EKGRVSVITKASVTDSNSYYAQGGIAAALA---ETDSIDAHVEDTLAAGAGICDEEAV 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 88 EYMCSVGPEAVFELEHMGLPFSRTETGRIYQRPFGGQSKDfgkggqaaRTCAAADRTGHALLHTLY-QANLKNGTSFLNE 166
Cdd:TIGR00551 78 WFVVSDGSEAVQFLVSHGVTFDRNEQGGVALTREGGHSYP--------RIFHAGDATGREIIPTLEkHARSEPNVNIIEG 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 167 WYAVDLVKNqDGAVVGIIAICIETGETvyIRSKAVVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIEMWQFHP 246
Cdd:TIGR00551 150 EFALDLLIE-TGRCAGVFVQGSGTLET--LHADAVVLATGGFGGLYRFTTNPKNSTGDGIALAWRAGVPVRDLEFVQFHP 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 247 TGIAGAGV---LVTEGCRGEGGYLINAHGERFMERYAPNAkDLAGRDVVARSMVKEVLAGNGvgpnkDHVLLKLDHLgeE 323
Cdd:TIGR00551 227 TALIKPRVryfLITEAVRGEGAKLVDRDGERFMADRHPRG-ELAPRDIVARAIDMEMAEGGG-----DCVFLDASGI--E 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 324 VLHSRLPGICELSKTfAHVDPVVAPIPVIPTCHYMMGGVATNIHGQAItqdangndqiVEGLFAVGEVACVSVHGANRLG 403
Cdd:TIGR00551 299 NFKDRFPTIYAVCRG-AGIDPEREPIPVAPGAHYTMGGISVDAFGRTT----------IPGLYAIGETACTGLHGANRLA 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 404 GNSLLDLVVFGRAAGLHLEKALKEGIDARGASESDLEASFKRLNGVnertsgeEVAPLKRELQSCMQNYFGVFRTGEYMQ 483
Cdd:TIGR00551 368 SNSLLECLVFGLRAARTISREPPYASREYQSGVWDEPRSENPLDRH-------ELQHKMSSLRSVLWNHAGIVRLEWSLR 440
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 489177895 484 KGIAQLADLRERIanvkindksqafntarIEALELQNLLEVAEATAIAAEHRKESRGAHAREDF 547
Cdd:TIGR00551 441 EALRKLVEIQDEV----------------DERMELSNLKLVAKLVTISALKREESRGAHYRLDY 488
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
25-560 |
1.33e-94 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 299.96 E-value: 1.33e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 25 LQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIASADPNDDwrwHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHM 104
Cdd:PRK07804 33 LAARRAGRRVLVVTKAALDDGSTRWAQGGIAAVLDPGDSPEA---HVADTLVAGAGLCDPDAVRSLVAEGPRAVRELVAL 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 105 GLPFSRTETGRIYQRPFGGQSKD--FGKGGQAarTCAAADRtghALLHTLYQANLKNGTSFLnewyAVDLVKNQDGAVVG 182
Cdd:PRK07804 110 GARFDESPDGRWALTREGGHSRRriVHAGGDA--TGAEVQR---ALDAAVRADPLDIREHAL----ALDLLTDGTGAVAG 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 183 IIAICIETGE---TVYIRSKAVVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIEMWQFHPTG-IAGAGV---- 254
Cdd:PRK07804 181 VTLHVLGEGSpdgVGAVHAPAVVLATGGLGQLYAATTNPAGSTGDGVALALRAGAAVSDLEFVQFHPTVlFLGPAAggqr 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 255 -LVTEGCRGEGGYLINAHGERFMERYAPNAkDLAGRDVVARSMVKeVLAGNGVgpnkDHVLlkLDHLGEEVLHSRLPGIC 333
Cdd:PRK07804 261 pLISEAVRGEGAILVDAQGNRFMAGVHPLA-DLAPRDVVAKAIDR-RMKATGD----DHVY--LDARGIEGFARRFPTIT 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 334 ElSKTFAHVDPVVAPIPVIPTCHYMMGGVATNIHGQAitqdangndqIVEGLFAVGEVACVSVHGANRLGGNSLLDLVVF 413
Cdd:PRK07804 333 A-SCRAAGIDPVRQPIPVAPAAHYSCGGVVTDVYGRT----------SVPGLYAAGEVACTGVHGANRLASNSLLEGLVV 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 414 GRAAGLHLEKALKEGIDARGASESDleasfkrlngvneRTSGEEVAPLKRELQSCMQNYFGVFRTGEymqkgiaQLADLR 493
Cdd:PRK07804 402 GERAGAAAAAHAAAAGRPRATPAVG-------------PEPGLLPALDRAELQRAMTRGAGVLRSAA-------GLARAA 461
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489177895 494 ERIANVkindkSQAFNTARIEALELQNLLEVAEATAIAAEHRKESRGAHAREDFEERDDEnWLCHTL 560
Cdd:PRK07804 462 DRLAAG-----APARVVPGRADWEDTNLTLVARALVAAALARTESRGCHWREDFPDTDDE-WARSIV 522
|
|
| sdhA |
PRK08641 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
25-590 |
2.20e-93 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236319 [Multi-domain] Cd Length: 589 Bit Score: 298.43 E-value: 2.20e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 25 LQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIASADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHM 104
Cdd:PRK08641 20 IKAAEAGVHVDLFSLVPVKRSHSVCAQGGINGAVNTKGEGDSPWIHFDDTVYGGDFLANQPPVKAMCEAAPGIIHLLDRM 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 105 GLPFSRTETGRIYQRPFGGQskdfgkggQAARTCAAADRTGHALLHTL------YQANlKNGTSFLNeWYAVDLVKNQDG 178
Cdd:PRK08641 100 GVMFNRTPEGLLDFRRFGGT--------LHHRTAFAGATTGQQLLYALdeqvrrYEVA-GLVTKYEG-WEFLGAVLDDEG 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 179 AVVGIIAICIETGETVYIRSKAVVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIEMWQFHPTGIAGAGV--LV 256
Cdd:PRK08641 170 VCRGIVAQDLFTMEIESFPADAVIMATGGPGIIFGKSTNSTINTGSAASRVYQQGAYYANGEFIQIHPTAIPGDDKlrLM 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 257 TEGCRGEGGYL-INAHGER--FMERYAPNAKDLAGRDVVARSMVKeVLAGNGVGPN-KDHVLLKLDHLGEEVLHSRLPGI 332
Cdd:PRK08641 250 SESARGEGGRVwTYKDGKPwyFLEEKYPAYGNLVPRDIATREIFD-VCVEQKLGINgENMVYLDLSHKDPKELDIKLGGI 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 333 CELSKTFAHVDPVVAPIPVIPTCHYMMGGV------ATNIHgqaitqdangndqiveGLFAVGEVAcVSVHGANRLGGNS 406
Cdd:PRK08641 329 LEIYEKFTGDDPRKVPMKIFPAVHYSMGGLwvdydqMTNIP----------------GLFAAGECD-YSYHGANRLGANS 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 407 LLDLVVFGRAAGlhlEKALK--EGID--ARGASESDLEASFK----RLNGVNERTSGEEVAPLKRELQSCMQNYFGVFRT 478
Cdd:PRK08641 392 LLSAIYGGMVAG---PNAVEyiKGLGksADDVSSSVFEQALKqeqeKFDNILSMDGTENAYVLHKELGEWMTDNVTVVRE 468
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 479 GEYMQKGIAQLADLRERIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEHRKESRGAHAREDFEERDDENWLCH 558
Cdd:PRK08641 469 NDKLLETDEKIQELMERYKRISVNDTSRWSNQGASFTRQLWNMLELARVITIGALNRNESRGAHYKPEFPERNDENWLKT 548
|
570 580 590
....*....|....*....|....*....|...
gi 489177895 559 TL-YFPGEKRvsKRSVNFAPKTVPAFEPKVRTY 590
Cdd:PRK08641 549 TMaTYTPEGE--EPEFSYEDVDTSLIPPRKRDY 579
|
|
| PRK08071 |
PRK08071 |
L-aspartate oxidase; Provisional |
36-555 |
4.29e-92 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236147 [Multi-domain] Cd Length: 510 Bit Score: 292.66 E-value: 4.29e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 36 VVTKVFPTRSHTVSAQGGITCAIAsadPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTETGR 115
Cdd:PRK08071 30 IITKKTKRNSNSHLAQGGIAAAVA---TYDSPNDHFEDTLVAGCHHNNERAVRYLVEEGPKEIQELIENGMPFDGDETGP 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 116 IYqrpfggqskdFGK-GGQAARTC--AAADRTGHALLHTLYQaNLKNGTSFLNEWYAVDLVKnQDGAVVGIIAIcIETGE 192
Cdd:PRK08071 107 LH----------LGKeGAHRKRRIlhAGGDATGKNLLEHLLQ-ELVPHVTVVEQEMVIDLII-ENGRCIGVLTK-DSEGK 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 193 TVYIRSKAVVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIEMWQFHPTGIAGAGV---LVTEGCRGEGGYLIN 269
Cdd:PRK08071 174 LKRYYADYVVLASGGCGGLYAFTSNDKTITGDGLAMAYRAGAELVDLEFIQFHPTMLYANGRcvgLVSEAVRGEGAVLIN 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 270 AHGERFMERYAPnAKDLAGRDVVARSMVKEVLAGNGVGPNKdhvllkldhlgEEVLH--SRLPGICELSKTfAHVDPVVA 347
Cdd:PRK08071 254 EDGRRFMMGIHP-LADLAPRDVVARAIHEELLSGEKVYLNI-----------SSIQNfeERFPTISALCEK-NGVDIETK 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 348 PIPVIPTCHYMMGGVATNIHGQAitqdangndqIVEGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLHLEKALKE 427
Cdd:PRK08071 321 RIPVVPGAHFLMGGVKTNLDGET----------SIPGLYAIGEVACTGVHGANRLASNSLLEGLVFGKRAAEHILTKATK 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 428 GIDARgasESDLEASFKRLNGVnertsgeevaPLKRELQSCMQNYFGVFRTGEYMQKGIAQLAD--LRERIANVKINDks 505
Cdd:PRK08071 391 PRLNP---FAEKEKKFIVLNHL----------PTKEEIQEKMMKYVGIVRTEQSLSEAKRWLEKygVRNMILDHDALT-- 455
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 489177895 506 qafntarIEALELQNLLEVAEATAIAAEHRKESRGAHAREDFEERddeNW 555
Cdd:PRK08071 456 -------NEEIELSHMLTVAKLIVVSALQRTESRGGHYRSDYPHR---NW 495
|
|
| sdhA_Bsu |
TIGR01811 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis ... |
42-590 |
6.00e-91 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes. [Energy metabolism, TCA cycle]
Pssm-ID: 130870 [Multi-domain] Cd Length: 603 Bit Score: 292.52 E-value: 6.00e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 42 PTRSHTVSAQGGITCAIASADPNDD-WRwHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTETGRIYQRP 120
Cdd:TIGR01811 33 PRRAHSIAAQGGINGAVNTKGDGDSpWR-HFDDTVKGGDFRARESPVKRLAVASPEIIDLMDAMGVPFAREYGGLLDTRS 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 121 FGGQskdfgkggQAARTCAAADRTGHALLHTLYQANLKNGTSFLNEWYA----VDLVKNQDGAVVGIIAICIETGETVYI 196
Cdd:TIGR01811 112 FGGV--------QVSRTAYARGQTGQQLLLALDSALRRQIAAGLVEKYEgwemLDIIVVDGNRARGIIARNLVTGEIETH 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 197 RSKAVVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIEMWQFHPTGIAGAG------VLVTEGCRGEG------ 264
Cdd:TIGR01811 184 SADAVILATGGYGNVFGKSTNAMNSNASAAWRAYEQGAYFANPEFIQIHPTAIPVDGtwqsklRLMSESLRNDGriwtpk 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 265 ----GYLINA--HGER--FMERYAPNAKDLAGRDVVARSMVKEVLAGNGVGPNKDHVLLKLDH----LGEEVLHSRLPGI 332
Cdd:TIGR01811 264 ekndNRDPNTipEDKRdyFLERRYPAFGNLVPRDIASRAIFQVCDAGKGVGPGENAVYLDFSDaderLGRKEIDAKYGNL 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 333 CELSKTFAHVDPVVAPIPVIPTCHYMMGGVATNIhgqaitqdangnDQI--VEGLFAVGEvACVSVHGANRLGGNSLLDL 410
Cdd:TIGR01811 344 FEMYEKFTGDDPYKVPMRIFPAVHYTMGGLWVDY------------DQMtnIPGLFAAGE-CDFSQHGANRLGANSLLSA 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 411 VVFGRAAG-------LHLEKA---LKEGIDARGASESDLEASFKRLNGVNERtsgEEVAPLKRELQSCMQNYFGVFRTGE 480
Cdd:TIGR01811 411 IADGYFALpftipnyLGPELSsedMPEDAPEFQAALAEEQERFDRLLKMRGD---ENPYYLHRELGEIMTENCGVSRNNE 487
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 481 YMQKGIAQLADLRERIA-NVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEHRKESRGAHAREDFE------ERDDE 553
Cdd:TIGR01811 488 KLLKTDEKIRELRERFWkNIDIPGTTKESNQVLEFARRVADYLELAELMCLDALNRNESCGAHFRPEFPtpdgeaERNDE 567
|
570 580 590
....*....|....*....|....*....|....*...
gi 489177895 554 NWLCHTLY-FPGEKRVSKRsvNFAPKTVPAFEPKVRTY 590
Cdd:TIGR01811 568 EFLKVTAWeFQGENDAPEF--HYEELDFELVPPRKRDY 603
|
|
| PRK07512 |
PRK07512 |
L-aspartate oxidase; Provisional |
50-553 |
1.55e-82 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236036 [Multi-domain] Cd Length: 513 Bit Score: 267.55 E-value: 1.55e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 50 AQGGITcaiASADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTETGRiyqrpfggqskdFG 129
Cdd:PRK07512 50 AQGGIA---AALGPDDSPALHAADTLAAGAGLCDPAVAALITAEAPAAIEDLLRLGVPFDRDADGR------------LA 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 130 KGGQAARTC-----AAADRTGHALLHTLYQANLKNGT-SFLNEWYAVDLVKnQDGAVVGIIAICieTGETVYIRSKAVVL 203
Cdd:PRK07512 115 LGLEAAHSRrrivhVGGDGAGAAIMRALIAAVRATPSiTVLEGAEARRLLV-DDGAVAGVLAAT--AGGPVVLPARAVVL 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 204 ATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIEMWQFHPTGIAGAG---VLVTEGCRGEGGYLINAHGERFMERYA 280
Cdd:PRK07512 192 ATGGIGGLYAVTTNPAGAFGQGLALAARAGAVIADPEFVQFHPTAIDIGRdpaPLATEALRGEGAILINEDGERFMADIH 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 281 PNAkDLAGRDVVARSMVKEVLAGNGVgpnkdhVLLKLDHLGEEVLHsRLPGICELSKTfAHVDPVVAPIPVIPTCHYMMG 360
Cdd:PRK07512 272 PGA-ELAPRDVVARAVFAEIAAGRGA------FLDARAALGAHFAT-RFPTVYAACRS-AGIDPARQPIPVAPAAHYHMG 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 361 GVATNIHGQAitqdangndqIVEGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGlhlekalkEGIDARGASESDle 440
Cdd:PRK07512 343 GIAVDADGRS----------SLPGLWAAGEVASTGLHGANRLASNSLLEAVVFAARAA--------EDIAGTPAAAAA-- 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 441 asfkrlnGVNERTSGEEVAPLKRELQSCMQNYFGVFRTGEYMQKGIAQLADLRERianvkindKSQAFNTAriealelqn 520
Cdd:PRK07512 403 -------PLSAAAAPALDPADLALLRPIMSRHVGVLRDADGLRRAIAALLPLEAG--------AGPAADPA--------- 458
|
490 500 510
....*....|....*....|....*....|...
gi 489177895 521 llEVAEATAIAAEHRKESRGAHAREDFEERDDE 553
Cdd:PRK07512 459 --TVALLIAVAALAREESRGAHFRTDFPLTAPA 489
|
|
| PRK09077 |
PRK09077 |
L-aspartate oxidase; Provisional |
1-553 |
2.38e-80 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236374 [Multi-domain] Cd Length: 536 Bit Score: 262.54 E-value: 2.38e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 1 MASIRTLSFDAIIVGGGGAGMRAALQLAQGgHKTAVVTKVFPTRSHTVSAQGGITCAIASADPNDDwrwHMYDTVKGSDY 80
Cdd:PRK09077 1 MNTSPEHQCDVLIIGSGAAGLSLALRLAEH-RRVAVLSKGPLSEGSTFYAQGGIAAVLDETDSIES---HVEDTLIAGAG 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 81 IGDQDAIEYMCSVGPEAVFELEHMGLPFSRTETGRIYQRpF-----GGQSkdfgkggqAARTCAAADRTGHALLHTLY-Q 154
Cdd:PRK09077 77 LCDEDAVRFIAENAREAVQWLIDQGVPFTTDEQANGEEG-YhltreGGHS--------HRRILHAADATGKAVQTTLVeR 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 155 ANLKNGTSFLNEWYAVDLVK----NQDGA-VVGIIAICIETGETVYIRSKAVVLATGGAGRIYASTTNALINTGDGVGMA 229
Cdd:PRK09077 148 ARNHPNITVLERHNAIDLITsdklGLPGRrVVGAYVLNRNKERVETIRAKFVVLATGGASKVYLYTTNPDIASGDGIAMA 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 230 LRAGVPVQDIEMWQFHPTGI---AGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAkDLAGRDVVARSMVKEvLAGNGV 306
Cdd:PRK09077 228 WRAGCRVANMEFNQFHPTCLyhpQARSFLITEALRGEGAYLKLPDGTRFMPDFDERA-ELAPRDIVARAIDHE-MKRLGA 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 307 gpnkDHVLLKLDHLGEEVLHSRLPGICELSKTFAhVDPVVAPIPVIPTCHYMMGGVATNIHGQAitqDangndqiVEGLF 386
Cdd:PRK09077 306 ----DCVYLDISHKPADFIRQHFPTIYERCLELG-IDITKEPIPVVPAAHYTCGGVMVDLHGRT---D-------LDGLY 370
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 387 AVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLHLEKALKEGI--------DARGASESDleasfkrlngvnertsgEEV 458
Cdd:PRK09077 371 AIGEVSYTGLHGANRMASNSLLECLVYGRSAAEDILSRLPKAPmpptlpawDESRVTDSD-----------------EEV 433
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 459 APLKR--ELQSCMQNYFGVFRTGEYMQKGIAQLADLRERI----ANVKI-NDksqafntarieALELQNLLEVAEATAIA 531
Cdd:PRK09077 434 VIQHNwhELRLFMWDYVGIVRTTKRLERALHRIRLLQQEIdeyyANFRVsNN-----------LLELRNLVQVAELIVRC 502
|
570 580
....*....|....*....|..
gi 489177895 532 AEHRKESRGAHAREDFEERDDE 553
Cdd:PRK09077 503 AMERKESRGLHYTLDYPELLPE 524
|
|
| PRK06175 |
PRK06175 |
L-aspartate oxidase; Provisional |
33-467 |
3.85e-66 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 180442 [Multi-domain] Cd Length: 433 Bit Score: 222.25 E-value: 3.85e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 33 KTAVVTKVFPTRSHTVSAQGGITCAIAsadpNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTE 112
Cdd:PRK06175 28 KILMVSKGKLNECNTYLAQGGISVARN----KDDITSFVEDTLKAGQYENNLEAVKILANESIENINKLIDMGLNFDKDE 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 113 TGRIYQRPfGGQSKDfgkggqaaRTCAAADRTGHALLHTLY-QANLKNGTSFLNEWYAVDLVKNQDgavVGIIAICIETG 191
Cdd:PRK06175 104 KELSYTKE-GAHSVN--------RIVHFKDNTGKKVEKILLkKVKKRKNITIIENCYLVDIIENDN---TCIGAICLKDN 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 192 ETVYIRSKAVVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIEMWQFHPT-----GIAGAGVLVTEGCRGEGGY 266
Cdd:PRK06175 172 KQINIYSKVTILATGGIGGLFKNSTNQRIITGDGIAIAIRNNIKIKDLDYIQIHPTafyeeTIEGKKFLISESVRGEGGK 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 267 LINAHGERFMERYAPnakdlagRDVVARSMVKEVLAgngvgPNKDHVLLKLDHLGEEVLHSRLPGICE--LSKTfahVDP 344
Cdd:PRK06175 252 LLNSKGERFVDELLP-------RDVVTKAILEEMKK-----TGSNYVYLDITFLDKDFLKNRFPTIYEecLKRG---IDI 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 345 VVAPIPVIPTCHYMMGGVATNIHGQAitqdangndqIVEGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLHLEKA 424
Cdd:PRK06175 317 TKDAIPVSPAQHYFMGGIKVDLNSKT----------SMKNLYAFGEVSCTGVHGANRLASNSLLEGLVFSKRGAEKINSE 386
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 489177895 425 LKEgIDARGASESDLEASFKRLNGVNERTSGEEVAPLKRELQS 467
Cdd:PRK06175 387 IDN-IKLNITKVYTLKHDVEYYSLLNKKIIIKEIEKLRGDLKD 428
|
|
| Succ_DH_flav_C |
pfam02910 |
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate ... |
462-590 |
1.24e-62 |
|
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate dehydrogenases and L-aspartate oxidases.
Pssm-ID: 460743 [Multi-domain] Cd Length: 129 Bit Score: 202.29 E-value: 1.24e-62
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 462 KRELQSCMQNYFGVFRTGEYMQKGIAQLADLRERIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEHRKESRGA 541
Cdd:pfam02910 1 RRELQKTMQDNVGVFRTEEGLKEALEKIQELRERYKNVRVTDKSKVFNTELIEALELANLLELAEATARSALARKESRGA 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 489177895 542 HAREDFEERDDENWLCHTLYFP----GEKRVSKRSVNFAPKtvpaFEPKVRTY 590
Cdd:pfam02910 81 HAREDYPERDDENWLKHTLAYYdgddGGPRLEYEPVTFTTL----FPPKERSY 129
|
|
| sdhA |
PRK07573 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
39-558 |
2.34e-51 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 236054 [Multi-domain] Cd Length: 640 Bit Score: 186.95 E-value: 2.34e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 39 KVF-----PTRSHTVSAQGGITCAIASADPNDDWRWHMYDTVKGSDYIGdQDAIEY---MCSVGPeavfeLEHM---GLP 107
Cdd:PRK07573 62 KVFcyqdsPRRAHSIAAQGGINAAKNYQNDGDSVYRLFYDTVKGGDFRA-REANVYrlaEVSVNI-----IDQCvaqGVP 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 108 FSRTETGRIYQRPFGGqskdfgkgGQAARTCAAADRTGHALLHTLYQA---NLKNGTSFLNEWYAV-DLVKNqDGAVVGI 183
Cdd:PRK07573 136 FAREYGGLLANRSFGG--------AQVSRTFYARGQTGQQLLLGAYQAlsrQIAAGTVKMYTRTEMlDLVVV-DGRARGI 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 184 IAICIETGETVYIRSKAVVLATGGAGRIYASTTNALintGDGVGMALRA---GVPVQDIEMWQFHPTGIAGAG------V 254
Cdd:PRK07573 207 VARNLVTGEIERHTADAVVLATGGYGNVFYLSTNAM---GSNATAIWRAhkkGAYFANPCFTQIHPTCIPVSGdyqsklT 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 255 LVTEGCRGEG--------GYLINAHG----ER--FMERYAPNAKDLAGRDVVARSmVKEVL-AGNGVGPNKDHVLLKL-- 317
Cdd:PRK07573 284 LMSESLRNDGriwvpkkkGDKRKPNDipeeERdyYLERRYPAFGNLVPRDVASRA-AKERCdAGRGVGPTGLGVYLDFad 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 318 --DHLGEEVLHSRLPGICELSKTFAHVDPVVAPIPVIPTCHYMMGGVATNIHGQAItqdangndqiVEGLFAVGEvACVS 395
Cdd:PRK07573 363 aiKRLGKDVIRERYGNLFDMYERITGENPYETPMRIYPAVHYTMGGLWVDYNLMST----------IPGLFVIGE-ANFS 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 396 VHGANRLGGNSLLDLVVFGR-----------AAGLHLEKaLKEGIDARGASESDLEASFKRLNGVNERTSgeeVAPLKRE 464
Cdd:PRK07573 432 DHGANRLGASALMQGLADGYfvlpytignylADTIGTPK-VSTDHPEFKEAEAEVQDRIDRLLNIKGKRT---VDSFHRE 507
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 465 LQSCMQNYFGVFRTGEYMQKGIAQLADLRERI-ANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEHRKESRGAHA 543
Cdd:PRK07573 508 LGKIMWDYCGMARNEEGLKKALEKIRALREEFwKNVRVPGSADELNQELEKAGRVADFLELGELMCRDALHREESCGGHF 587
|
570 580
....*....|....*....|.
gi 489177895 544 REDFE------ERDDENWlCH 558
Cdd:PRK07573 588 REEHQtedgeaLRDDENF-AY 607
|
|
| PRK08401 |
PRK08401 |
L-aspartate oxidase; Provisional |
25-547 |
1.89e-49 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236259 [Multi-domain] Cd Length: 466 Bit Score: 178.07 E-value: 1.89e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 25 LQLAQGGHKTAVVTKVfPTRSHTVSAQGGITCAIASADpndDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHM 104
Cdd:PRK08401 18 ISLAKKGFDVTIIGPG-IKKSNSYLAQAGIAFPILEGD---SIRAHVLDTIRAGKYINDEEVVWNVISKSSEAYDFLTSL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 105 GLPF--SRTETGRIYQRPFGGQSKdfgkggqaartcaaadrTGHALLHTLYQANLKNGTSFLNEWyaVDLVKNQDGAVVG 182
Cdd:PRK08401 94 GLEFegNELEGGHSFPRVFTIKNE-----------------TGKHIIKILYKHARELGVNFIRGF--AEELAIKNGKAYG 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 183 IIAicieTGEtvYIRSKAVVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIEMWQFHPTGIAGA-GV-LVTEGC 260
Cdd:PRK08401 155 VFL----DGE--LLKFDATVIATGGFSGLFKFTAGSPLNLGTLIGDAVMKGAPARDLEFVQFHPTGFIGKrGTyLISEAV 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 261 RGEGGYLINAHGERFMeryapnaKDLAGRDVVARSMVKEVLAGNGVgpnkdhvllKLDHLGEEVLHSRLPGICELSKTfA 340
Cdd:PRK08401 229 RGAGAKLVTGDGERFV-------NELETRDIVARAIYRKMQEGKGV---------FLDATGIEDFKRRFPQIYAFLRK-E 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 341 HVDPVVAPIPVIPTCHYMMGGVATNIHGQAitqdangndqIVEGLFAVGEVACVSVHGANRLGGNSLLDLVVfgraAGLH 420
Cdd:PRK08401 292 GIDPSRDLIPVTPIAHYTIGGISVDTFYRT----------GIKNLYAIGEAASNGFHGANRLASNSLLECIV----SGLE 357
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 421 LekalkegidARGASESDleasfKRLNGVNE-RTSGEEVAPLKrELQSCMQNYFGVFRTGEYMQKGIAQLADlrerianv 499
Cdd:PRK08401 358 V---------ARTISRER-----PKLREVKEpPYHGYELGDVD-SIREILWNHAGIVRSEESLREGLKKLEG-------- 414
|
490 500 510 520
....*....|....*....|....*....|....*....|....*...
gi 489177895 500 kindksqafntarIEALELQNLLevAEATAIAAEHRKESRGAHAREDF 547
Cdd:PRK08401 415 -------------IEADPRLKLL--AKGVLECALAREESRGAHYREDF 447
|
|
| flavo_cyto_c |
TIGR01813 |
flavocytochrome c; This model describes a family of redox proteins related to the succinate ... |
73-418 |
3.67e-41 |
|
flavocytochrome c; This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport]
Pssm-ID: 273816 [Multi-domain] Cd Length: 439 Bit Score: 154.42 E-value: 3.67e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 73 DTVKGSDYIGDQDAIEYMCSVGPEAVfELEHMGLPFSRTETGRiyqrpFGGQSKDfgkggQAARTcAAADRTGHALLHTL 152
Cdd:TIGR01813 69 DTLKGGRGINDPELVRILAEESKDAV-DWLQDGVGARLDDLIQ-----LGGHSVP-----RAHRP-TGGAASGAEIVQTL 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 153 YQANLKNGTSFLNEWYAVDLVKNQDGAVVGIIAIciETGETVYIR-SKAVVLATGGAGR------------IYASTTNAL 219
Cdd:TIGR01813 137 YKKAKKEGIDTRLNSKVEDLIQDDQGSVVGVVVK--GKGKGIYIKaAKAVVLATGGFGSnkemiakydptlKHLGSTNQP 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 220 INTGDGVGMALRAGVPVQDIEMWQFHPTG-IAGAGVLVTEGCRGEGGYLINAHGERFMEryapnakDLAGRDVVARSMVK 298
Cdd:TIGR01813 215 GATGDGLLMAEKIGAALVDMDYIQAHPTAsPDEGGFLISEAVRGYGAILVNKTGERFMN-------ELATRDKVSDAILA 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 299 E------VLAGNGV--------GPNKDHVLLKLDHLGEEVLHSRLPgICELSKTFAHVDPVV------------------ 346
Cdd:TIGR01813 288 QpgkdayLIFDDDVykkakmvdNYYRLGVAYKGDSLEELAKQFGIP-AAALKQTIKDYNGYVasgkdtpfgrpmdmptdl 366
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 489177895 347 --APIPVI---PTCHYMMGGVATNIHGQAItqDANGndQIVEGLFAVGEVACvSVHGANRLGGNSLLDLVVFGRAAG 418
Cdd:TIGR01813 367 skAPYYAIkvtPGVHHTMGGVKINTKAEVL--DANG--KPIPGLFAAGEVTG-GVHGANRLGGNAIADCIVFGRIAG 438
|
|
| PRK08275 |
PRK08275 |
putative oxidoreductase; Provisional |
78-573 |
1.56e-40 |
|
putative oxidoreductase; Provisional
Pssm-ID: 181346 [Multi-domain] Cd Length: 554 Bit Score: 155.21 E-value: 1.56e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 78 SDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTETGRIYQR---PFGgqskdfgkggqaarTCAAADRTGHALLHTLYQ 154
Cdd:PRK08275 80 NDGIVDQKAVYAYAEHSFETIQQLDRWGVKFEKDETGDYAVKkvhHMG--------------SYVLPMPEGHDIKKVLYR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 155 ANLKNGTSFLNEWYAVDLVKNQDGAVVGIIAICIETGETVYIRSKAVVLATGGAGRI-----------YASTTNAlintG 223
Cdd:PRK08275 146 QLKRARVLITNRIMATRLLTDADGRVAGALGFDCRTGEFLVIRAKAVILCCGAAGRLglpasgylfgtYENPTNA----G 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 224 DGVGMALRAGVPVQDIEMWQFHP-----TGIAGAGVlvtegcRGE-GGYLINAHGERFMERYAPNAKdlagrdvVARSMV 297
Cdd:PRK08275 222 DGYAMAYHAGAELANLECFQINPlikdyNGPACAYV------TGPlGGYTANAKGERFIECDYWSGQ-------MMWEFY 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 298 KEVLAGNgvGPnkdhVLLKLDHLGEE-------VLHSrlpgiCE---------LSKTFAHVDPVVAPIPVIPTCHymmGG 361
Cdd:PRK08275 289 QELQSGN--GP----VFLKLDHLAEEtiqtietILHT-----NErpsrgrfheGRGTDYRQQMVEMHISEIGFCS---GH 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 362 VATNIHgqaitQDANGnDQIVEGLFAVGEVACVsvhganrlGGNSLLDLVVFGRAAGLH-LEKAlkEGIDARGASESDLE 440
Cdd:PRK08275 355 SASGVW-----VNEKA-ETTVPGLYAAGDMASV--------PHNYMLGAFTYGWFAGENaAEYV--AGRDLPEVDAAQVE 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 441 ASFKRLNGVNERTSGEEVAPLKRELQSCMQNYFGVFRTGEYMQKGIAQLADLRERIANVKINDKSQAfntarIEALELQN 520
Cdd:PRK08275 419 AERARVLAPLHREDGLPPAQVEYKLRRLVNDYLQPPKVTRKMEIGLQRFAEIREDLERIKARDPHEL-----MRALEVSS 493
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 489177895 521 LLEVAEATAIAAEHRKESRGA--HAREDFEERDDENWLCHTLYFPGEK---RVSKRSV 573
Cdd:PRK08275 494 IRDCAEMAARASLFRTESRWGlyHYRVDFPERNDAEWFCHTHLRKDEDgrmVSFKRPV 551
|
|
| PRK06481 |
PRK06481 |
flavocytochrome c; |
8-418 |
3.41e-31 |
|
flavocytochrome c;
Pssm-ID: 180584 [Multi-domain] Cd Length: 506 Bit Score: 127.26 E-value: 3.41e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 8 SFDAIIVGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIAS-------ADPNDDWrwhMYDTVKGSDY 80
Cdd:PRK06481 61 KYDIVIVGAGGAGMSAAIEAKDAGMNPVILEKMPVAGGNTMKASSGMNASETKfqkaqgiADSNDKF---YEETLKGGGG 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 81 IGDQDAIEYMCSVGPEAVFELEHMGLPFSRTETGriyqrpfGGQSKdfgkggqaARTCAAADrtGHALLHTLYQANLKNG 160
Cdd:PRK06481 138 TNDKALLRYFVDNSASAIDWLDSMGIKLDNLTIT-------GGMSE--------KRTHRPHD--GSAVGGYLVDGLLKNV 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 161 TS-----FLNEwyAVDLVKNQDGAVVGIiAICIETGETVYIRSKAVVLATGGAG-------------RIYAsTTNALINT 222
Cdd:PRK06481 201 QErkiplFVNA--DVTKITEKDGKVTGV-KVKINGKETKTISSKAVVVTTGGFGankdmiakyrpdlKGYV-TTNQEGST 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 223 GDGVGMALRAGVPVQDIEMWQFHPTGIAGAGVLVTEGCRGEGGYLINAHGERFMeryapnaKDLAGRDVVARSMVKE--- 299
Cdd:PRK06481 277 GDGIKMIEKLGGTTVDMDQIQIHPTVQQSKSYLIGEAVRGEGAILVNQKGKRFG-------NELDTRDKVSAAINKLpek 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 300 ---VLAGNGVgpnKDHV----------LLK----LDHLGEEVlhsRLPGIcELSKTFAHVDPVVA--------------- 347
Cdd:PRK06481 350 yayVVFDSGV---KDRVkaiaqyeekgFVEegktIDELAKKI---NVPAE-TLTKTLDTWNKAVKnkkdeafgrttgmdn 422
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 489177895 348 --------PIPVIPTCHYMMGGVATNIHGQAITQDAngndQIVEGLFAVGEVACvSVHGANRLGGNSLLDLVVFGRAAG 418
Cdd:PRK06481 423 dlstgpyyAIKIAPGIHYTMGGVKINTNTEVLKKDG----SPITGLYAAGEVTG-GLHGENRIGGNSVADIIIFGRQAG 496
|
|
| PTZ00306 |
PTZ00306 |
NADH-dependent fumarate reductase; Provisional |
96-418 |
1.70e-23 |
|
NADH-dependent fumarate reductase; Provisional
Pssm-ID: 140327 [Multi-domain] Cd Length: 1167 Bit Score: 105.63 E-value: 1.70e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 96 EAVFELEHMGLPFSRtetgrIYQrpFGGQSKdfgkggqaARTCAAADRT-------GHALLHTLYQ---ANLKNGTSFLN 165
Cdd:PTZ00306 502 DAISWLSSLGVPLTV-----LSQ--LGGASR--------KRCHRAPDKKdgtpvpiGFTIMRTLEDhirTKLSGRVTIMT 566
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 166 EWYAVDLVKNQ----DGA----VVGI--IAICIETGETVYIRSKAVVLATGGAG---------RIYAS------TTNALI 220
Cdd:PTZ00306 567 ETTVTSLLSESsarpDGVreirVTGVryKQASDASGQVMDLLADAVILATGGFSndhtpnsllREYAPqlsgfpTTNGPW 646
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 221 NTGDGVGMALRAGVPVQDIEMWQFHPTGIAG-------AGVLVTEGCRGEGGYLINAHGERFMeryapNAKDLagRDVVA 293
Cdd:PTZ00306 647 ATGDGVKLARKLGATLVDMDKVQLHPTGLIDpkdpsnrTKYLGPEALRGSGGVLLNKNGERFV-----NELDL--RSVVS 719
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 294 RSMVKE---------------VL---AGNGVGPNK--------------DHV--LLKLDHLGEEVLHSRLPGICELSK-- 337
Cdd:PTZ00306 720 QAIIAQgneypgsggskfaycVLneaAAKLFGKNSlgfywkrlglfqrvDDVkgLAKLIGCPVENLHRTLETYERLSTkk 799
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 338 -----TFAHVDP-VVAPI-P-----VIPTCHYMMGG--------VATNIHGQAITQDANGndqiVEGLFAVGEVACvSVH 397
Cdd:PTZ00306 800 vacplTGKVVFPcVVGTQgPyyvafVTPSIHYTMGGclispsaeMQMEDNSVNIFEDRRP----ILGLFGAGEVTG-GVH 874
|
410 420
....*....|....*....|.
gi 489177895 398 GANRLGGNSLLDLVVFGRAAG 418
Cdd:PTZ00306 875 GGNRLGGNSLLECVVFGKIAG 895
|
|
| PRK06854 |
PRK06854 |
adenylyl-sulfate reductase subunit alpha; |
164-574 |
1.92e-21 |
|
adenylyl-sulfate reductase subunit alpha;
Pssm-ID: 235879 [Multi-domain] Cd Length: 608 Bit Score: 98.46 E-value: 1.92e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 164 LNEWYAVDLVKNqDGAVVGIIAICIETGETVYIRSKAVVLATGGAGRIYA--STTNAL-------INTGDGVGMALRAGV 234
Cdd:PRK06854 151 LNRVFITDLLVD-DNRIAGAVGFSVRENKFYVFKAKAVIVATGGAAGIYRprSPGEGRgrmwyppFNTGSGYAMGIRAGA 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 235 PVQDIEMwQFHPT----GIA--GAGVLvtegcrGEGGYLINAHGERFMERYAPNAKDLAGRDVVAR--------SMVKEV 300
Cdd:PRK06854 230 EMTTFEN-RFIPLrfkdGYGpvGAWFL------LFKAKAVNALGEEYEAKNAAELKKYVPYADYKPiptclrnyATVEEN 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 301 LAGNGVGPNKDHVLLKLDHLGEEVLHSRL---PGICELsktFA--HVDPVVAPIPVIPTCHYMMGGvatniHGQAITQDA 375
Cdd:PRK06854 303 KAGRGPIYMDTEEALQDKHLESELWEDFLdmtPGQALL---WAaqNIEPEEENSEIMGTEPYIVGS-----HSGASGYWV 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 376 NGNDQI--------------VEGLFAVGEVACVSVH----GA---NRLGGNSLLDLVVFGRAAGLHLEKALKEGIDARga 434
Cdd:PRK06854 375 SGPEDWvpeeykwgynrmttVEGLFAAGDVVGGSPHkfssGSfaeGRIAAKAAVRYILDNKDEKPEIDDDQIEELKKE-- 452
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 435 sesdLEASFKRLNGVNERTSGEEVAP-------LKRELQSCMQNYFG----VFRTGEYM-QKGIAQLADLRERIANVKIN 502
Cdd:PRK06854 453 ----IYAPLERYEEFKDYSTDPDVNPnyispeqLEERLQKIMDEYAGgistNYTTNEKLlEIALELLEMLEEDSEKLAAR 528
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 489177895 503 DKSQAfntarIEALELQNLLEVAEATAIAAEHRKESR--GAHAREDFEERDDENWLC--HTLYFPGEKRVSKRSVN 574
Cdd:PRK06854 529 DLHEL-----MRCWELKHRLLVAEAHIRHLLFRKETRwpGYYERADYPGKDDENWKCfvNSRYDPGTGEWTIRKLP 599
|
|
| PRK13800 |
PRK13800 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
173-581 |
1.03e-18 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 237512 [Multi-domain] Cd Length: 897 Bit Score: 90.29 E-value: 1.03e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 173 VKNQDGAVVGIIAICIETGETVYIRSKAVVLATGGAGRI-----------YASTTNAlintGDGVGMALRAGVPVQDIEM 241
Cdd:PRK13800 169 VLTEGGRAVGAAALNTRTGEFVTVGAKAVILATGPCGRLglpasgylygtYENPTNA----GDGYSMAYHAGAELSGIEC 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 242 WQFHP-----TGIAGAGVlvtegCRGEGGYLINAHGERFMEryapnakdlagRDVVARSMVKEVlaGNGVGPNKDHVLLK 316
Cdd:PRK13800 245 FQINPlikdyNGPACAYV-----ANPFGGYQVNAQGERFVD-----------SDYWSGQMMAEV--KREIESARGPIYLK 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 317 LDHLGEEVLhSRLPGICELSK-----TFaHVD--------PVVAPIPVIPTCH-YMMGGVATNIHGQAitqdangndqIV 382
Cdd:PRK13800 307 VSHLPEETL-SALESILHTTErptrgTF-HANrghdyrthDIEMHISEIGLCSgHSASGVWVDEHART----------TV 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 383 EGLFAVGEVACVSvHganrlggNSLLDLVVFGRAAGLHLEKALKEGIDARGASESDLEASFKRLNGVNERTSGEEVAPLK 462
Cdd:PRK13800 375 PGLYAAGDLACVP-H-------NYMIGAFVFGDLAGAHAAGTLAEVPAPGELPADQLAEAHELIYRPLRHPDGPPQPQVE 446
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 463 RELQSCMQNYFGVFRTGEYMQKGIAQLADLRERIANVKINDKSQAFNTAriealELQNLLEVAEATAIAAEHRKESRGA- 541
Cdd:PRK13800 447 YKLRRFVNDYVAPPKTAAKLSIAVETFERMAAEIAGMGARTPHELMRCA-----EVSFIRDCAEMAARSSLTRTESRWGl 521
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 489177895 542 -HAREDFEERDDENWLCHTLYFP---GEKRVSKRSVnfAPKTVP 581
Cdd:PRK13800 522 yHDRADLPERDDASWGYHLNLRKgddGEMEFLKRPV--APYFVP 563
|
|
| PRK12837 |
PRK12837 |
FAD-binding protein; |
122-294 |
9.35e-07 |
|
FAD-binding protein;
Pssm-ID: 237222 [Multi-domain] Cd Length: 513 Bit Score: 51.75 E-value: 9.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 122 GGQSKDFGKGGQA--ARTCAAADRTGHALLHTlyqanlknGTSFlnewyaVDLVKnQDGAVVGiiAICIETGETVYIRS- 198
Cdd:PRK12837 162 GAPPPDYLVGGRAliGRFLAALARFPNARLRL--------NTPL------VELVV-EDGRVVG--AVVERGGERRRVRAr 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 199 KAVVLATGGAgriyasTTNALINTGDGV--------------GMALRAGVPV------QDIEMWQ---FHPTGIAGAGVL 255
Cdd:PRK12837 225 RGVLLAAGGF------EQNDDMRARYGVpgsardtmggpgntGLAHQAAIAVgadtdlMDQAWWSpglTHPDGRSAFALW 298
|
170 180 190
....*....|....*....|....*....|....*....
gi 489177895 256 VTegcrgeGGYLINAHGERFMERYAPnaKDLAGRDVVAR 294
Cdd:PRK12837 299 FT------GGIFVDQHGERFVNESAP--YDRLGRAVIAE 329
|
|
| PRK08274 |
PRK08274 |
FAD-dependent tricarballylate dehydrogenase TcuA; |
145-418 |
2.28e-06 |
|
FAD-dependent tricarballylate dehydrogenase TcuA;
Pssm-ID: 236214 [Multi-domain] Cd Length: 466 Bit Score: 50.26 E-value: 2.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 145 GHALLHTLYQANLKNGTSFLNEWYAVDLVKNqDGAVVGIIAiCIETGETVYIRSKAVVLATGGAG------RIY--ASTT 216
Cdd:PRK08274 130 GKALVNALYRSAERLGVEIRYDAPVTALELD-DGRFVGARA-GSAAGGAERIRAKAVVLAAGGFEsnrewlREAwgQPAD 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 217 NALI-----NTGDGVGMALRAGV-PVQDiemW-QFHPTGI-AGA----GVLVTegcRGEG---GYLINAHGERF------ 275
Cdd:PRK08274 208 NFLVrgtpyNQGDLLKALLDAGAdRIGD---PsQCHAVAIdARAplydGGICT---RIDCvplGIVVNRDGERFydeged 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 276 -----------------------------MERYAPNA---------KDLAGR-DVVARSMVKEVLAGN------------ 304
Cdd:PRK08274 282 fwpkryaiwgrlvaqqpgqiayqifdakaIGRFMPPVfppiqadtlEELAEKlGLDPAAFLRTVAAFNaavrpgpfdptv 361
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 305 -------GVGPNKDHVLLKLDH---LGEEVlhsrLPGIcelskTFAHvdpvvapipviptchymmGGVATNIHGQAITQD 374
Cdd:PRK08274 362 lddcgteGLTPPKSHWARPIDTppfYAYPV----RPGI-----TFTY------------------LGLKVDEDARVRFAD 414
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 489177895 375 angnDQIVEGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAG 418
Cdd:PRK08274 415 ----GRPSPNLFAAGEMMAGNVLGKGYPAGVGLTIGAVFGRIAG 454
|
|
| PRK07121 |
PRK07121 |
FAD-binding protein; |
145-275 |
8.61e-06 |
|
FAD-binding protein;
Pssm-ID: 180854 [Multi-domain] Cd Length: 492 Bit Score: 48.34 E-value: 8.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 145 GHALLHTLYQANLKNGTSFLNEWYAVDLVKNQDGAVVGIIAICIetGETVYIRS-KAVVLATGG---------------A 208
Cdd:PRK07121 176 GAMLMDPLAKRAAALGVQIRYDTRATRLIVDDDGRVVGVEARRY--GETVAIRArKGVVLAAGGfamnremvaryapayA 253
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 209 GRIYASTTNaliNTGDGVGMALRAGVPVQD---IEMWQFhptgIAGAGVLVTegcrgegGYLINAHGERF 275
Cdd:PRK07121 254 GGLPLGTTG---DDGSGIRLGQSAGGATAHmdqVFAWRF----IYPPSALLR-------GILVNARGQRF 309
|
|
| PRK07843 |
PRK07843 |
3-oxosteroid 1-dehydrogenase; |
170-309 |
2.96e-05 |
|
3-oxosteroid 1-dehydrogenase;
Pssm-ID: 236111 [Multi-domain] Cd Length: 557 Bit Score: 46.95 E-value: 2.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 170 VDLVKnQDGAVVGIIAIciETGETVYIRS-KAVVLATGG-----AGRI-YAS-------TTNALINTGDGVGMALRAGVP 235
Cdd:PRK07843 232 TDLYV-EDGRVTGVHAA--ESGEPQLIRArRGVILASGGfehneQMRAkYQRapigtewTVGAKANTGDGILAGEKLGAA 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 236 VQDIEMWQFHPTgiagagVLVTEG---CRGE----GGYLINAHGERFMERYAPNAkdlagrDVVARSMVKEVLAGNGVGP 308
Cdd:PRK07843 309 LDLMDDAWWGPT------IPLPGGpwfALSErnlpGSIIVNMSGKRFMNESAPYV------EAVHHMYGGEYGQGPGPGE 376
|
.
gi 489177895 309 N 309
Cdd:PRK07843 377 N 377
|
|
| PRK12844 |
PRK12844 |
3-ketosteroid-delta-1-dehydrogenase; Reviewed |
8-428 |
5.98e-05 |
|
3-ketosteroid-delta-1-dehydrogenase; Reviewed
Pssm-ID: 183787 [Multi-domain] Cd Length: 557 Bit Score: 45.90 E-value: 5.98e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 8 SFDAIIVGGGGAGMRAALQLAQGGHKTAVVTKVfPTRSHTVSAQGGI--------TCAIASADPNDDWRWHMYDTVKGSD 79
Cdd:PRK12844 6 TYDVVVVGSGGGGMCAALAAADSGLEPLIVEKQ-DKVGGSTAMSGGVlwlpnnplMKAAGVPDSHEDALAYLDAVVGDQG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 80 YIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTE----------------------------TGRIYQRPFGGQSKDFG-- 129
Cdd:PRK12844 85 PASSPERREAYLRAGPAMVSFLEHQGMRFARCEgwsdyypdlpggeargrsleakpfdarkLGPWFDRLNPPMATPPGtv 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 130 ----------------KGGQAA-----RTCAAADR------TGHALLHTLYQANLKNGTSFLNEWYAVDLVKnQDGAVVG 182
Cdd:PRK12844 165 vmtdeykwlqlikrtpRGMRTAarvgaRTLAARIRgqklltNGAALIGRMLEAALAAGVPLWTNTPLTELIV-EDGRVVG 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 183 IIAicIETGETVYIRS-KAVVLATGGAGR------------IYASTTNALI-NTGDGVGMALRAGVPVQDIEM--W---Q 243
Cdd:PRK12844 244 VVV--VRDGREVLIRArRGVLLASGGFGHnaemrkryqpqpNSGDWTNANPgDTGEVIEAAMRLGAALDLMDEawWvpgA 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 244 FHPTGIAGAGVLVTEGCRgEGGYLINAHGERFMER---YAPNAKDLAGRDVVARSMVKE-------VLAGNGVGPNKDH- 312
Cdd:PRK12844 322 PLPNGGPRPYMHNSERSK-PGSIIVDRAGRRFVNEagsYMEVGRAMYAQDAVPAWMIMDsryrkryLFGTIPPGPTPQEw 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 489177895 313 ----VLLKLDHLGEEVLHSRLP--GICELSKTF---------------------AHVDPVVAPIP-----VIPTCHYMM- 359
Cdd:PRK12844 401 ldsgYMKRADTIEELAGKTGIDpaGLAATVERFngfaatgtdpdfhrgesaydrYYGDPTNKPNPslgplDKPPFYAVRm 480
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 489177895 360 --------GGVATNIHGQAITQDangnDQIVEGLFAVGEvACVSVHGANRLG-GNSLLDLVVFGRAAGLHLEKALKEG 428
Cdd:PRK12844 481 vpgdvgtsGGLLTDEHARVLRED----GSVIPGLYATGN-CTASVMGRTYPGaGASIGNSFVFGYIAALHAAGARSAD 553
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
359-425 |
1.43e-04 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 44.78 E-value: 1.43e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 489177895 359 MGGVATNIHGQAITQDAngndQIVEGLFAVGEVACV---SVHGANRLGGnSLLDLVVF-GRAAGLHLEKAL 425
Cdd:COG3573 486 LGGLQTDLDSRVLDADG----QPIPGLYAAGEAAGFgggGVHGYRALEG-TFLGGCIFsGRAAGRAIAAAL 551
|
|
| PRK12834 |
PRK12834 |
putative FAD-binding dehydrogenase; Reviewed |
359-424 |
3.13e-04 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 183782 [Multi-domain] Cd Length: 549 Bit Score: 43.73 E-value: 3.13e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 489177895 359 MGGVATNIHGQAITQDAngndQIVEGLFAVGEVACV---SVHGANRLGGNSLLDLVVFGRAAGLHLEKA 424
Cdd:PRK12834 485 LGGLETDLDSRVLGADG----TPLPGLYAAGEAAGFgggGVHGYNALEGTFLGGCIFSGRAAGRAAARA 549
|
|
| |
