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Conserved domains on  [gi|1844953365|ref|WP_171648387|]
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MULTISPECIES: septum formation initiator family protein [Paenibacillus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FtsL2 super family cl44142
Cell division protein FtsL [Cell cycle control, cell division, chromosome partitioning];
17-126 9.15e-20

Cell division protein FtsL [Cell cycle control, cell division, chromosome partitioning];


The actual alignment was detected with superfamily member COG4839:

Pssm-ID: 443867  Cd Length: 123  Bit Score: 78.84  E-value: 9.15e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1844953365  17 APAPKVKIKETTKVVYRNKTLPTQEKMLYLFTVILCVIVAGVIIWRYAAIYQMNANILKMQSEIREMQAQNSALKQEVEK 96
Cdd:COG4839    15 QQQPRTEPQPRKVKKKKRKKITKGEKLLYLLFVVVLLVLAIVLLSLQASIYELNREIQSLESKISEQQKENEDLEQEVSE 94

                          90       100       110
                  ....*....|....*....|....*....|
gi 1844953365  97 LQSPERMKGEAVRLGFNLgDEKKVSLVTPE 126
Cdd:COG4839    95 LSSPERIYKIAKKLGLKL-NNSNVKVVQKQ 123
 
Name Accession Description Interval E-value
FtsL2 COG4839
Cell division protein FtsL [Cell cycle control, cell division, chromosome partitioning];
17-126 9.15e-20

Cell division protein FtsL [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 443867  Cd Length: 123  Bit Score: 78.84  E-value: 9.15e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1844953365  17 APAPKVKIKETTKVVYRNKTLPTQEKMLYLFTVILCVIVAGVIIWRYAAIYQMNANILKMQSEIREMQAQNSALKQEVEK 96
Cdd:COG4839    15 QQQPRTEPQPRKVKKKKRKKITKGEKLLYLLFVVVLLVLAIVLLSLQASIYELNREIQSLESKISEQQKENEDLEQEVSE 94

                          90       100       110
                  ....*....|....*....|....*....|
gi 1844953365  97 LQSPERMKGEAVRLGFNLgDEKKVSLVTPE 126
Cdd:COG4839    95 LSSPERIYKIAKKLGLKL-NNSNVKVVQKQ 123
ftsL_broad TIGR02209
cell division protein FtsL; This model represents FtsL, both forms similar to that in E. coli ...
 41-102 1.28e-06

cell division protein FtsL; This model represents FtsL, both forms similar to that in E. coli and similar to that in B. subtilis. FtsL is one of the later proteins active in cell division septum formation. FtsL is small, low in complexity, and highly divergent. The scope of this model is broader than that of the pfam04999.3 for FtsL, as this one includes FtsL from Bacillus subtilis and related species. [Cellular processes, Cell division]


Pssm-ID: 131264  Cd Length: 85  Bit Score: 43.79  E-value: 1.28e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1844953365  41 EKMLYLFTVILCVIVAGVIIWRYAAIYQMNANILKMQSEIREMQAQNSALKQEVEKLQSPER 102
Cdd:TIGR02209   1 EKKLYVLLLLAILVSAISVVSAQHQTRQLNNELQKLQLEIDKLQKEWRDLQLEVAELSRHER 62
DivIC pfam04977
Septum formation initiator; DivIC from B. subtilis is necessary for both vegetative and ...
 63-114 3.87e-04

Septum formation initiator; DivIC from B. subtilis is necessary for both vegetative and sporulation septum formation. These proteins are mainly composed of an amino terminal coiled-coil.


Pssm-ID: 428231 [Multi-domain]  Cd Length: 69  Bit Score: 36.81  E-value: 3.87e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1844953365  63 YAAIYQMNANILKMQSEIREMQAQNSALKQEVEKLQSPERMKGEAVRLGFNL 114
Cdd:pfam04977   5 LLTYYQLKQEIAQLQAEIAKLKQENEELEAEIKDLKSDPDYIEERARSELGM 56
 
Name Accession Description Interval E-value
FtsL2 COG4839
Cell division protein FtsL [Cell cycle control, cell division, chromosome partitioning];
17-126 9.15e-20

Cell division protein FtsL [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 443867  Cd Length: 123  Bit Score: 78.84  E-value: 9.15e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1844953365  17 APAPKVKIKETTKVVYRNKTLPTQEKMLYLFTVILCVIVAGVIIWRYAAIYQMNANILKMQSEIREMQAQNSALKQEVEK 96
Cdd:COG4839    15 QQQPRTEPQPRKVKKKKRKKITKGEKLLYLLFVVVLLVLAIVLLSLQASIYELNREIQSLESKISEQQKENEDLEQEVSE 94

                          90       100       110
                  ....*....|....*....|....*....|
gi 1844953365  97 LQSPERMKGEAVRLGFNLgDEKKVSLVTPE 126
Cdd:COG4839    95 LSSPERIYKIAKKLGLKL-NNSNVKVVQKQ 123
FtsB COG2919
Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];
42-129 3.82e-07

Cell division protein FtsB [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442163 [Multi-domain]  Cd Length: 96  Bit Score: 45.26  E-value: 3.82e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1844953365  42 KMLYLFTVILCVIVAGVIIWR----YAAIYQMNANILKMQSEIREMQAQNSALKQEVEKLQSPERMKGEAVR--LGFNLG 115
Cdd:COG2919     3 RLLRTLVLLLLLAYLQYHLWFgdggLLAYRELRQEIAELEAENAKLKARNAELEAEVADLKDGPDYIEERAReeLGMVKP 82

                          90
                  ....*....|....
gi 1844953365 116 DEKKVSLVTPEKTK 129
Cdd:COG2919    83 GETFYRVPDPEKAA 96
ftsL_broad TIGR02209
cell division protein FtsL; This model represents FtsL, both forms similar to that in E. coli ...
 41-102 1.28e-06

cell division protein FtsL; This model represents FtsL, both forms similar to that in E. coli and similar to that in B. subtilis. FtsL is one of the later proteins active in cell division septum formation. FtsL is small, low in complexity, and highly divergent. The scope of this model is broader than that of the pfam04999.3 for FtsL, as this one includes FtsL from Bacillus subtilis and related species. [Cellular processes, Cell division]


Pssm-ID: 131264  Cd Length: 85  Bit Score: 43.79  E-value: 1.28e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1844953365  41 EKMLYLFTVILCVIVAGVIIWRYAAIYQMNANILKMQSEIREMQAQNSALKQEVEKLQSPER 102
Cdd:TIGR02209   1 EKKLYVLLLLAILVSAISVVSAQHQTRQLNNELQKLQLEIDKLQKEWRDLQLEVAELSRHER 62
DivIC pfam04977
Septum formation initiator; DivIC from B. subtilis is necessary for both vegetative and ...
 63-114 3.87e-04

Septum formation initiator; DivIC from B. subtilis is necessary for both vegetative and sporulation septum formation. These proteins are mainly composed of an amino terminal coiled-coil.


Pssm-ID: 428231 [Multi-domain]  Cd Length: 69  Bit Score: 36.81  E-value: 3.87e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1844953365  63 YAAIYQMNANILKMQSEIREMQAQNSALKQEVEKLQSPERMKGEAVRLGFNL 114
Cdd:pfam04977   5 LLTYYQLKQEIAQLQAEIAKLKQENEELEAEIKDLKSDPDYIEERARSELGM 56
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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