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Conserved domains on  [gi|2164200401|ref|WP_231647829|]
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DUF2742 domain-containing protein [Mycobacterium avium]

Protein Classification

DUF2742 domain-containing protein( domain architecture ID 10566858)

DUF2742 domain-containing protein similar to Mycobacterium tuberculosis protein Rv2656c and protein Rv1583c

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2742 pfam10888
Protein of unknown function (DUF2742); Members in this family of phage proteins are the ...
 2-95 3.96e-33

Protein of unknown function (DUF2742); Members in this family of phage proteins are the product of the gene phiRv1, however no function is known.


:

Pssm-ID: 371285  Cd Length: 97  Bit Score: 110.38  E-value: 3.96e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164200401   2 SWWETHQFIEALITQANTGPLppAGTPAWSALADGDPRKLLALAVAGEHHVLRVETAQTAMAEASQAVSAAADWTRIGRR 81
Cdd:pfam10888   6 SWWRVHTFIVPQLETAGVWPM--AGTPAWCDLDDADPVKWLAVADAGAHHLLRVETAQAAMARASSAVSAAADWARISRA 83

                          90
                  ....*....|....
gi 2164200401  82 NRDHEDIHRQRPWL 95
Cdd:pfam10888  84 DRRHYIPRRRRPWV 97
 
Name Accession Description Interval E-value
DUF2742 pfam10888
Protein of unknown function (DUF2742); Members in this family of phage proteins are the ...
 2-95 3.96e-33

Protein of unknown function (DUF2742); Members in this family of phage proteins are the product of the gene phiRv1, however no function is known.


Pssm-ID: 371285  Cd Length: 97  Bit Score: 110.38  E-value: 3.96e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164200401   2 SWWETHQFIEALITQANTGPLppAGTPAWSALADGDPRKLLALAVAGEHHVLRVETAQTAMAEASQAVSAAADWTRIGRR 81
Cdd:pfam10888   6 SWWRVHTFIVPQLETAGVWPM--AGTPAWCDLDDADPVKWLAVADAGAHHLLRVETAQAAMARASSAVSAAADWARISRA 83

                          90
                  ....*....|....
gi 2164200401  82 NRDHEDIHRQRPWL 95
Cdd:pfam10888  84 DRRHYIPRRRRPWV 97
 
Name Accession Description Interval E-value
DUF2742 pfam10888
Protein of unknown function (DUF2742); Members in this family of phage proteins are the ...
 2-95 3.96e-33

Protein of unknown function (DUF2742); Members in this family of phage proteins are the product of the gene phiRv1, however no function is known.


Pssm-ID: 371285  Cd Length: 97  Bit Score: 110.38  E-value: 3.96e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2164200401   2 SWWETHQFIEALITQANTGPLppAGTPAWSALADGDPRKLLALAVAGEHHVLRVETAQTAMAEASQAVSAAADWTRIGRR 81
Cdd:pfam10888   6 SWWRVHTFIVPQLETAGVWPM--AGTPAWCDLDDADPVKWLAVADAGAHHLLRVETAQAAMARASSAVSAAADWARISRA 83

                          90
                  ....*....|....
gi 2164200401  82 NRDHEDIHRQRPWL 95
Cdd:pfam10888  84 DRRHYIPRRRRPWV 97
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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