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Conserved domains on  [gi|198474119|ref|XP_002132633|]
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uncharacterized protein LOC6902899 [Drosophila pseudoobscura]

Protein Classification

DUF1091 domain-containing protein (domain architecture ID 10534441)

DUF1091 domain-containing protein similar to Drosophila melanogaster chemosensory protein A 84a

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF1091 pfam06477
Protein of unknown function (DUF1091); This is a family of uncharacterized proteins. Based on ...
73-161 2.52e-11

Protein of unknown function (DUF1091); This is a family of uncharacterized proteins. Based on its distant similarity to pfam02221 and conserved pattern of cysteine residues it is possible that these domains are also lipid binding.


:

Pssm-ID: 399471  Cd Length: 83  Bit Score: 56.94  E-value: 2.52e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 198474119   73 VEGHAYRSFSGDesaYKLVPLSIPrTPFGRFIDT---YYKDVFIPNVGYCSNLPHfeanfQPPWPRKTYRLDKCVFSGQG 149
Cdd:pfam06477   1 VNISLFKRRNNG---YKPFLYNVT-VDFCKFLKNpnnPLFKIFYKSLKKFSNLNH-----TCPYPKGNYYVRNFRLDEKL 71
                          90
                  ....*....|..
gi 198474119  150 LPEILPLGYYKI 161
Cdd:pfam06477  72 LPSFLPEGDYKL 83
 
Name Accession Description Interval E-value
DUF1091 pfam06477
Protein of unknown function (DUF1091); This is a family of uncharacterized proteins. Based on ...
73-161 2.52e-11

Protein of unknown function (DUF1091); This is a family of uncharacterized proteins. Based on its distant similarity to pfam02221 and conserved pattern of cysteine residues it is possible that these domains are also lipid binding.


Pssm-ID: 399471  Cd Length: 83  Bit Score: 56.94  E-value: 2.52e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 198474119   73 VEGHAYRSFSGDesaYKLVPLSIPrTPFGRFIDT---YYKDVFIPNVGYCSNLPHfeanfQPPWPRKTYRLDKCVFSGQG 149
Cdd:pfam06477   1 VNISLFKRRNNG---YKPFLYNVT-VDFCKFLKNpnnPLFKIFYKSLKKFSNLNH-----TCPYPKGNYYVRNFRLDEKL 71
                          90
                  ....*....|..
gi 198474119  150 LPEILPLGYYKI 161
Cdd:pfam06477  72 LPSFLPEGDYKL 83
 
Name Accession Description Interval E-value
DUF1091 pfam06477
Protein of unknown function (DUF1091); This is a family of uncharacterized proteins. Based on ...
73-161 2.52e-11

Protein of unknown function (DUF1091); This is a family of uncharacterized proteins. Based on its distant similarity to pfam02221 and conserved pattern of cysteine residues it is possible that these domains are also lipid binding.


Pssm-ID: 399471  Cd Length: 83  Bit Score: 56.94  E-value: 2.52e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 198474119   73 VEGHAYRSFSGDesaYKLVPLSIPrTPFGRFIDT---YYKDVFIPNVGYCSNLPHfeanfQPPWPRKTYRLDKCVFSGQG 149
Cdd:pfam06477   1 VNISLFKRRNNG---YKPFLYNVT-VDFCKFLKNpnnPLFKIFYKSLKKFSNLNH-----TCPYPKGNYYVRNFRLDEKL 71
                          90
                  ....*....|..
gi 198474119  150 LPEILPLGYYKI 161
Cdd:pfam06477  72 LPSFLPEGDYKL 83
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.19
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
  • Marchler-Bauer A et al. (2015), "CDD: NCBI's conserved domain database.", Nucleic Acids Res.43(D)222-6.
  • Marchler-Bauer A et al. (2011), "CDD: a Conserved Domain Database for the functional annotation of proteins.", Nucleic Acids Res.39(D)225-9.
  • Marchler-Bauer A, Bryant SH (2004), "CD-Search: protein domain annotations on the fly.", Nucleic Acids Res.32(W)327-331.
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