|
Name |
Accession |
Description |
Interval |
E-value |
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
756-901 |
9.39e-24 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 97.78 E-value: 9.39e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 756 EYTAYIIHAHKDrdWVWEHFSPM-EEQDQSLKFCLEERDFEAGVLGLEAIVNSIKRSRKIIFVITHHLLKDPLCrRFKVH 834
Cdd:smart00255 1 EYDVFISYSGKE--DVRNEFLSHlLEKLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWC-LDELV 77
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568954547 835 HAVQQAIEQNLDSIILIFLQNIPDYKLNHALCLRRGMFKShcILNWPvqKERINAFHHKLQVALGSR 901
Cdd:smart00255 78 AALENALEEGGLRVIPIFYEVIPSDVRKQPGKFRKVFKKN--YLKWP--EDEKEQFWKKALYAVPSK 140
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
70-543 |
1.30e-14 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 78.35 E-value: 1.30e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 70 TNFTRYSQLAIldAGFNSISKLEPELCQiLPLLKVLNLQHNELS-QISDQTFVFCTNLTELDLMSNSIhkIKSNPFKNQK 148
Cdd:PLN00113 66 NNSSRVVSIDL--SGKNISGKISSAIFR-LPYIQTINLSNNQLSgPIPDDIFTTSSSLRYLNLSNNNF--TGSIPRGSIP 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 149 NLIKLDLSHNGLSStklgtgvqlenlqelllaknKILAlrseELEFLgnSSLRKLDLSSNPLKEFSPGCFQTIGKLFALL 228
Cdd:PLN00113 141 NLETLDLSNNMLSG--------------------EIPN----DIGSF--SSLKVLDLGGNVLVGKIPNSLTNLTSLEFLT 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 229 LNNAQLNPHLTEKLCwelSNTSIQNLSLANNQLLATSESTFSGLkwTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEY 308
Cdd:PLN00113 195 LASNQLVGQIPRELG---QMKSLKWIYLGYNNLSGEIPYEIGGL--TSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQ 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 309 NNIQRLSPRSFYGLSNLryLSLKraFTKQSVSlashPNIDDFSFQwLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSL- 387
Cdd:PLN00113 270 NKLSGPIPPSIFSLQKL--ISLD--LSDNSLS----GEIPELVIQ-LQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLw 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 388 SKTFT------------------SLQTLTNETFVSLAHSPLLT-LNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKL 448
Cdd:PLN00113 341 SNKFSgeipknlgkhnnltvldlSTNNLTGEIPEGLCSSGNLFkLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGEL 420
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 449 SgQEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVA-------------LKNVDIS--------PSPFRPLR 507
Cdd:PLN00113 421 P-SEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKffgglpdsfgskrLENLDLSrnqfsgavPRKLGSLS 499
|
490 500 510
....*....|....*....|....*....|....*.
gi 568954547 508 NLTILDLSNNNIANINEDLLEGLENLEILDFQHNNL 543
Cdd:PLN00113 500 ELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQL 535
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
52-416 |
1.81e-13 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 73.43 E-value: 1.81e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 52 SNITVLNLTHNQlrrlpptNFTRYSQLAILDAGFNSISKLEPELCQiLPLLKVLNLQHNELSQISDQtFVFCTNLTELDL 131
Cdd:COG4886 96 TNLTELDLSGNE-------ELSNLTNLESLDLSGNQLTDLPEELAN-LTNLKELDLSNNQLTDLPEP-LGNLTNLKSLDL 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 132 MSNSIHKIkSNPFKNQKNLIKLDLSHNGLSStklgtgvqlenlqelllaknkilalrsEELEFLGNSSLRKLDLSSNPLK 211
Cdd:COG4886 167 SNNQLTDL-PEELGNLTNLKELDLSNNQITD---------------------------LPEPLGNLTNLEELDLSGNQLT 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 212 EFsPGCFQTIGKLFALLLNNAQLnphltEKLCWELSNTSIQNLSLANNQLLATSEStfsgLKWTNLTQLDLSYNNLHDVG 291
Cdd:COG4886 219 DL-PEPLANLTNLETLDLSNNQL-----TDLPELGNLTNLEELDLSNNQLTDLPPL----ANLTNLKTLDLSNNQLTDLK 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 292 NGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPST 371
Cdd:COG4886 289 LKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLT 368
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 568954547 372 KSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLLTLNLT 416
Cdd:COG4886 369 LGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLLLTLALLDAVNT 413
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
275-330 |
3.92e-12 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 61.77 E-value: 3.92e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 568954547 275 TNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSL 330
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDL 56
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
405-541 |
6.88e-12 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 65.96 E-value: 6.88e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 405 LAHSPLLT-LNLTKNHISKIANgtFSWLGQLRILDLGLNEIEqKLSGQEwrGLRNIFEIYLSYNKyLQLST-------SS 476
Cdd:cd21340 42 LEFLTNLThLYLQNNQIEKIEN--LENLVNLKKLYLGGNRIS-VVEGLE--NLTNLEELHIENQR-LPPGEkltfdprSL 115
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568954547 477 FALVPSLQRLMLRRvalKNVDiSPSPFRPLRNLTILDLSNNNIANINE--DLLEGLENLEILDFQHN 541
Cdd:cd21340 116 AALSNSLRVLNISG---NNID-SLEPLAPLRNLEQLDASNNQISDLEEllDLLSSWPSLRELDLTGN 178
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
763-881 |
1.34e-06 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 49.29 E-value: 1.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 763 HAHKDRDWVWEHFSPmeEQDQ-SLKFCLEERDFEAGVLGLEAIVNSIKRSRKIIFVITHHLLKDPLCrRFKVHHAVQQAI 841
Cdd:pfam01582 8 RGSDTREWFVSHLLK--ELKQkGIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWC-LDELVKILECAL 84
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 568954547 842 EQNLdSIILIFLQNIPDYKLNHALCLRRGmFKSHC-------ILNWP 881
Cdd:pfam01582 85 DLGQ-KVIPIFYEVDPSDVRKQTGSFGKA-FKKHKkvlteekVLKWR 129
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
503-649 |
1.71e-06 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 49.78 E-value: 1.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 503 FRPLRNLTILDLSNNNIANIneDLLEGLENLEILDFQHNNLARLwkranpggpvNFLKGLSHLHILNLESN------GLD 576
Cdd:cd21340 20 LSLCKNLKVLYLYDNKITKI--ENLEFLTNLTHLYLQNNQIEKI----------ENLENLVNLKKLYLGGNrisvveGLE 87
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568954547 577 EIPvgvfkNLFELKsinLGLNNLNKLEPFIFDDQT------SLRSLNLQKNLITSVEKDVfgpPFQNLNSLDMRFNPFD 649
Cdd:cd21340 88 NLT-----NLEELH---IENQRLPPGEKLTFDPRSlaalsnSLRVLNISGNNIDSLEPLA---PLRNLEQLDASNNQIS 155
|
|
| LRRCT |
smart00082 |
Leucine rich repeat C-terminal domain; |
646-698 |
5.93e-06 |
|
Leucine rich repeat C-terminal domain;
Pssm-ID: 214507 [Multi-domain] Cd Length: 51 Bit Score: 44.34 E-value: 5.93e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 568954547 646 NPFDCTCEsISWFVNWINQT-HTNISElstHYLCNTPHHYYGfPLKLFDTSS--CK 698
Cdd:smart00082 1 NPFICDCE-LRWLLRWLQANeHLQDPV---DLRCASPSSLRG-PLLELLHSEfkCP 51
|
|
| Tlr3_TMD |
pfam17968 |
Toll-like receptor 3 trans-membrane domain; Toll-like receptor (TLR) 3 is an endosomal TLR ... |
699-731 |
9.89e-05 |
|
Toll-like receptor 3 trans-membrane domain; Toll-like receptor (TLR) 3 is an endosomal TLR that mediates immune responses against viral infections upon activation by its ligand double-stranded RNA, a replication intermediate of most viruses. TLR3 is expressed widely in the body and activates both the innate and adaptive immune systems. This entry represents the Toll-like receptor 3 trans-membrane domain which has been shown to form dimers and trimers with different surfaces for helix-helix interaction.
Pssm-ID: 465595 Cd Length: 33 Bit Score: 40.37 E-value: 9.89e-05
10 20 30
....*....|....*....|....*....|...
gi 568954547 699 DSAPFELLFIISTSMLLVFILVVLLIHIEGWRI 731
Cdd:pfam17968 1 DSAPFKLLFVISSTAVLLFIFIVLLIHFQGWRI 33
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| TIR |
smart00255 |
Toll - interleukin 1 - resistance; |
756-901 |
9.39e-24 |
|
Toll - interleukin 1 - resistance;
Pssm-ID: 214587 [Multi-domain] Cd Length: 140 Bit Score: 97.78 E-value: 9.39e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 756 EYTAYIIHAHKDrdWVWEHFSPM-EEQDQSLKFCLEERDFEAGVLGLEAIVNSIKRSRKIIFVITHHLLKDPLCrRFKVH 834
Cdd:smart00255 1 EYDVFISYSGKE--DVRNEFLSHlLEKLRGYGLCVFIDDFEPGGGDLEEIDEAIEKSRIAIVVLSPNYAESEWC-LDELV 77
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568954547 835 HAVQQAIEQNLDSIILIFLQNIPDYKLNHALCLRRGMFKShcILNWPvqKERINAFHHKLQVALGSR 901
Cdd:smart00255 78 AALENALEEGGLRVIPIFYEVIPSDVRKQPGKFRKVFKKN--YLKWP--EDEKEQFWKKALYAVPSK 140
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
70-543 |
1.30e-14 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 78.35 E-value: 1.30e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 70 TNFTRYSQLAIldAGFNSISKLEPELCQiLPLLKVLNLQHNELS-QISDQTFVFCTNLTELDLMSNSIhkIKSNPFKNQK 148
Cdd:PLN00113 66 NNSSRVVSIDL--SGKNISGKISSAIFR-LPYIQTINLSNNQLSgPIPDDIFTTSSSLRYLNLSNNNF--TGSIPRGSIP 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 149 NLIKLDLSHNGLSStklgtgvqlenlqelllaknKILAlrseELEFLgnSSLRKLDLSSNPLKEFSPGCFQTIGKLFALL 228
Cdd:PLN00113 141 NLETLDLSNNMLSG--------------------EIPN----DIGSF--SSLKVLDLGGNVLVGKIPNSLTNLTSLEFLT 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 229 LNNAQLNPHLTEKLCwelSNTSIQNLSLANNQLLATSESTFSGLkwTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEY 308
Cdd:PLN00113 195 LASNQLVGQIPRELG---QMKSLKWIYLGYNNLSGEIPYEIGGL--TSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQ 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 309 NNIQRLSPRSFYGLSNLryLSLKraFTKQSVSlashPNIDDFSFQwLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSL- 387
Cdd:PLN00113 270 NKLSGPIPPSIFSLQKL--ISLD--LSDNSLS----GEIPELVIQ-LQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLw 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 388 SKTFT------------------SLQTLTNETFVSLAHSPLLT-LNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKL 448
Cdd:PLN00113 341 SNKFSgeipknlgkhnnltvldlSTNNLTGEIPEGLCSSGNLFkLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGEL 420
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 449 SgQEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVA-------------LKNVDIS--------PSPFRPLR 507
Cdd:PLN00113 421 P-SEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKffgglpdsfgskrLENLDLSrnqfsgavPRKLGSLS 499
|
490 500 510
....*....|....*....|....*....|....*.
gi 568954547 508 NLTILDLSNNNIANINEDLLEGLENLEILDFQHNNL 543
Cdd:PLN00113 500 ELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQL 535
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
52-416 |
1.81e-13 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 73.43 E-value: 1.81e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 52 SNITVLNLTHNQlrrlpptNFTRYSQLAILDAGFNSISKLEPELCQiLPLLKVLNLQHNELSQISDQtFVFCTNLTELDL 131
Cdd:COG4886 96 TNLTELDLSGNE-------ELSNLTNLESLDLSGNQLTDLPEELAN-LTNLKELDLSNNQLTDLPEP-LGNLTNLKSLDL 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 132 MSNSIHKIkSNPFKNQKNLIKLDLSHNGLSStklgtgvqlenlqelllaknkilalrsEELEFLGNSSLRKLDLSSNPLK 211
Cdd:COG4886 167 SNNQLTDL-PEELGNLTNLKELDLSNNQITD---------------------------LPEPLGNLTNLEELDLSGNQLT 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 212 EFsPGCFQTIGKLFALLLNNAQLnphltEKLCWELSNTSIQNLSLANNQLLATSEStfsgLKWTNLTQLDLSYNNLHDVG 291
Cdd:COG4886 219 DL-PEPLANLTNLETLDLSNNQL-----TDLPELGNLTNLEELDLSNNQLTDLPPL----ANLTNLKTLDLSNNQLTDLK 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 292 NGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPST 371
Cdd:COG4886 289 LKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLT 368
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 568954547 372 KSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHSPLLTLNLT 416
Cdd:COG4886 369 LGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLLLTLALLDAVNT 413
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
37-289 |
2.60e-13 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 73.04 E-value: 2.60e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 37 DCSHLKLTHIPDDLPS--NITVLNLTHNQLRRLPPtNFTRYSQLAILDAGFNSISKLEPELCQiLPLLKVLNLQHNELSQ 114
Cdd:COG4886 142 DLSNNQLTDLPEPLGNltNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQITDLPEPLGN-LTNLEELDLSGNQLTD 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 115 ISDQtFVFCTNLTELDLMSNSIHKIKSnpFKNQKNLIKLDLSHNGLSStkLGTGVQLENLQELLLAKNKILALRSEELEF 194
Cdd:COG4886 220 LPEP-LANLTNLETLDLSNNQLTDLPE--LGNLTNLEELDLSNNQLTD--LPPLANLTNLKTLDLSNNQLTDLKLKELEL 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 195 LGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKW 274
Cdd:COG4886 295 LLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGL 374
|
250
....*....|....*
gi 568954547 275 TNLTQLDLSYNNLHD 289
Cdd:COG4886 375 LEATLLTLALLLLTL 389
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
86-537 |
3.52e-12 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 69.58 E-value: 3.52e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 86 NSISKLEPELCQILPLLKVLNLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKL 165
Cdd:COG4886 1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 166 GTGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPgcfqTIGKLfalllnnaqlnphlteklcwe 245
Cdd:COG4886 81 LLSLLLLGLTDLGDLTNLTELDLSGNEELSNLTNLESLDLSGNQLTDLPE----ELANL--------------------- 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 246 lsnTSIQNLSLANNQlLATSESTFSGLkwTNLTQLDLSYNNLHDVGNgSFSYLPSLRYLSLEYNNIQRLsPRSFYGLSNL 325
Cdd:COG4886 136 ---TNLKELDLSNNQ-LTDLPEPLGNL--TNLKSLDLSNNQLTDLPE-ELGNLTNLKELDLSNNQITDL-PEPLGNLTNL 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 326 RYLSLkraftkqsvslaSHPNIDDF--SFQWLKYLEYLNMDDNNIPSTKSntFTGLVSLKYLSLS----KTFTSLQTLTN 399
Cdd:COG4886 208 EELDL------------SGNQLTDLpePLANLTNLETLDLSNNQLTDLPE--LGNLTNLEELDLSnnqlTDLPPLANLTN 273
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 400 ETFVSLAHSPLLTLNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQLSTSSFAL 479
Cdd:COG4886 274 LKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLL 353
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 568954547 480 VPSLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIANINEDLLEGLENLEILD 537
Cdd:COG4886 354 LLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLLLTLALLDAV 411
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
275-330 |
3.92e-12 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 61.77 E-value: 3.92e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 568954547 275 TNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSL 330
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDL 56
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
405-541 |
6.88e-12 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 65.96 E-value: 6.88e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 405 LAHSPLLT-LNLTKNHISKIANgtFSWLGQLRILDLGLNEIEqKLSGQEwrGLRNIFEIYLSYNKyLQLST-------SS 476
Cdd:cd21340 42 LEFLTNLThLYLQNNQIEKIEN--LENLVNLKKLYLGGNRIS-VVEGLE--NLTNLEELHIENQR-LPPGEkltfdprSL 115
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568954547 477 FALVPSLQRLMLRRvalKNVDiSPSPFRPLRNLTILDLSNNNIANINE--DLLEGLENLEILDFQHN 541
Cdd:cd21340 116 AALSNSLRVLNISG---NNID-SLEPLAPLRNLEQLDASNNQISDLEEllDLLSSWPSLRELDLTGN 178
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
133-551 |
7.13e-12 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 68.42 E-value: 7.13e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 133 SNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKE 212
Cdd:COG4886 7 SLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 213 FSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLlatsestfsglkwTNLTQLDLSYNNLHDVGN 292
Cdd:COG4886 87 LGLTDLGDLTNLTELDLSGNEELSNLTNLESLDLSGNQLTDLPEELANL-------------TNLKELDLSNNQLTDLPE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 293 gSFSYLPSLRYLSLEYNNIQRLsPRSFYGLSNLRYLSLkraftkqsvslaSHPNIDDF--SFQWLKYLEYLNMDDNNIpS 370
Cdd:COG4886 154 -PLGNLTNLKSLDLSNNQLTDL-PEELGNLTNLKELDL------------SNNQITDLpePLGNLTNLEELDLSGNQL-T 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 371 TKSNTFTGLVSLKYLSLS----KTFTSLQTLTNetfvslahspLLTLNLTKNHISKIanGTFSWLGQLRILDLGLNEIEq 446
Cdd:COG4886 219 DLPEPLANLTNLETLDLSnnqlTDLPELGNLTN----------LEELDLSNNQLTDL--PPLANLTNLKTLDLSNNQLT- 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 447 KLSGQEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIANINEDL 526
Cdd:COG4886 286 DLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTL 365
|
410 420
....*....|....*....|....*
gi 568954547 527 LEGLENLEILDFQHNNLARLWKRAN 551
Cdd:COG4886 366 LLTLGLLGLLEATLLTLALLLLTLL 390
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
296-677 |
4.54e-11 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 66.11 E-value: 4.54e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 296 SYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNT 375
Cdd:COG4886 12 LLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTD 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 376 FTGLVSLKYLSLSKTfTSLQTLTNETFVSLAHSP-------------LLTLNLTKNHISKIANgTFSWLGQLRILDLGLN 442
Cdd:COG4886 92 LGDLTNLTELDLSGN-EELSNLTNLESLDLSGNQltdlpeelanltnLKELDLSNNQLTDLPE-PLGNLTNLKSLDLSNN 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 443 EIEQKlsGQEWRGLRNIFEIYLSYNKYLQLStSSFALVPSLQRLMLRRVALKNVdisPSPFRPLRNLTILDLSNNNIANI 522
Cdd:COG4886 170 QLTDL--PEELGNLTNLKELDLSNNQITDLP-EPLGNLTNLEELDLSGNQLTDL---PEPLANLTNLETLDLSNNQLTDL 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 523 NEdlLEGLENLEILDFQHNNLARLwkranpggpvNFLKGLSHLHILNLESNGLDEIPVGVFKNLFELKSINLGLNNLNKL 602
Cdd:COG4886 244 PE--LGNLTNLEELDLSNNQLTDL----------PPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLL 311
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568954547 603 EPFIFDDQTSLRSLNLQKNLITSVEKDVFGPPFQNLNSLDMRFNPFDCTCESISWFVNWINQTHTNISELSTHYL 677
Cdd:COG4886 312 ELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLL 386
|
|
| LRR |
COG4886 |
Leucine-rich repeat (LRR) protein [Transcription]; |
180-623 |
2.76e-10 |
|
Leucine-rich repeat (LRR) protein [Transcription];
Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 63.41 E-value: 2.76e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 180 AKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANN 259
Cdd:COG4886 1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 260 QLLATSESTFSGLKWTNLTQLDLSYNNlhdvgngSFSYLPSLRYLSLEYNNIQRLsPRSFYGLSNLRYLSLkraftkqsv 339
Cdd:COG4886 81 LLSLLLLGLTDLGDLTNLTELDLSGNE-------ELSNLTNLESLDLSGNQLTDL-PEELANLTNLKELDL--------- 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 340 slaSHPNIDDF--SFQWLKYLEYLNMDDNNIPStksntftglvslkylsLSKTFTSLQTLTnetfvslahspllTLNLTK 417
Cdd:COG4886 144 ---SNNQLTDLpePLGNLTNLKSLDLSNNQLTD----------------LPEELGNLTNLK-------------ELDLSN 191
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 418 NHISKIANgTFSWLGQLRILDLGLNEIEQkLSgQEWRGLRNIFEIYLSYNkylQLST-SSFALVPSLQRLMLRRVALKNV 496
Cdd:COG4886 192 NQITDLPE-PLGNLTNLEELDLSGNQLTD-LP-EPLANLTNLETLDLSNN---QLTDlPELGNLTNLEELDLSNNQLTDL 265
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 497 dispSPFRPLRNLTILDLSNNNIANINEDLLEGLENLEILDFQHNNLARLWKRANPGGPVNFLKGLSHLHILNLESNGLD 576
Cdd:COG4886 266 ----PPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLA 341
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 568954547 577 EIPVGVFKNLFELKSINLGLNNLNKLEPFIFDDQTSLRSLNLQKNLI 623
Cdd:COG4886 342 LSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLT 388
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
249-311 |
8.99e-10 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 55.22 E-value: 8.99e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568954547 249 TSIQNLSLANNQLLATSESTFSGLKwtNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNI 311
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLS--NLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
100-319 |
4.51e-08 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 55.82 E-value: 4.51e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 100 PLLKVLNLQHNELSQISDQT------FVFCTNLTELDLMSNSIHKIKSNPFKN---QKNLIKLDLSHNGLSSTKLgtgvq 170
Cdd:cd00116 51 PSLKELCLSLNETGRIPRGLqsllqgLTKGCGLQELDLSDNALGPDGCGVLESllrSSSLQELKLNNNGLGDRGL----- 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 171 lenlqelllaKNKILALRSEELeflgnsSLRKLDLSSNPLKEFS----PGCFQTIGKLFALLLNNAQLNPHLTEKLCWEL 246
Cdd:cd00116 126 ----------RLLAKGLKDLPP------ALEKLVLGRNRLEGAScealAKALRANRDLKELNLANNGIGDAGIRALAEGL 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 247 -SNTSIQNLSLANNQLLATSESTFSGL--KWTNLTQLDLSYNNLHDVG-----NGSFSYLPSLRYLSLEYNNIQRLSPRS 318
Cdd:cd00116 190 kANCNLEVLDLNNNGLTDEGASALAETlaSLKSLEVLNLGDNNLTDAGaaalaSALLSPNISLLTLSLSCNDITDDGAKD 269
|
.
gi 568954547 319 F 319
Cdd:cd00116 270 L 270
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
481-543 |
1.71e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 48.67 E-value: 1.71e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568954547 481 PSLQRLMLRRVALknVDISPSPFRPLRNLTILDLSNNNIANINEDLLEGLENLEILDFQHNNL 543
Cdd:pfam13855 1 PNLRSLDLSNNRL--TSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
42-158 |
2.80e-07 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 52.10 E-value: 2.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 42 KLTHIPD-DLPSNITVLNLTHNQLRRLPptNFTRYSQLAILDAGFNSISKLE-----PEL------CQILPL-------- 101
Cdd:cd21340 35 KITKIENlEFLTNLTHLYLQNNQIEKIE--NLENLVNLKKLYLGGNRISVVEglenlTNLeelhieNQRLPPgekltfdp 112
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568954547 102 ---------LKVLNLQHNELSQISDqtFVFCTNLTELDLMSNSIHKIK--SNPFKNQKNLIKLDLSHN 158
Cdd:cd21340 113 rslaalsnsLRVLNISGNNIDSLEP--LAPLRNLEQLDASNNQISDLEelLDLLSSWPSLRELDLTGN 178
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
76-136 |
8.12e-07 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 46.75 E-value: 8.12e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568954547 76 SQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELSQISDQTFVFCTNLTELDLMSNSI 136
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| TIR |
pfam01582 |
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular ... |
763-881 |
1.34e-06 |
|
TIR domain; The Toll/interleukin-1 receptor (TIR) homology domain is an intracellular signalling domain found in MyD88, interleukin 1 receptor and the Toll receptor. It contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components. TIR-like motifs are also found in plant proteins thought to be involved in resistance to disease. When activated, TIR domains recruit cytoplasmic adaptor proteins MyD88 and TOLLIP (Toll interacting protein). In turn, these associate with various kinases to set off signalling cascades.
Pssm-ID: 396246 [Multi-domain] Cd Length: 165 Bit Score: 49.29 E-value: 1.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 763 HAHKDRDWVWEHFSPmeEQDQ-SLKFCLEERDFEAGVLGLEAIVNSIKRSRKIIFVITHHLLKDPLCrRFKVHHAVQQAI 841
Cdd:pfam01582 8 RGSDTREWFVSHLLK--ELKQkGIKLFIDDRDLEPGEAIAPELLSAIEKSRRSVVVLSPNYASSGWC-LDELVKILECAL 84
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 568954547 842 EQNLdSIILIFLQNIPDYKLNHALCLRRGmFKSHC-------ILNWP 881
Cdd:pfam01582 85 DLGQ-KVIPIFYEVDPSDVRKQTGSFGKA-FKKHKkvlteekVLKWR 129
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
503-649 |
1.71e-06 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 49.78 E-value: 1.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 503 FRPLRNLTILDLSNNNIANIneDLLEGLENLEILDFQHNNLARLwkranpggpvNFLKGLSHLHILNLESN------GLD 576
Cdd:cd21340 20 LSLCKNLKVLYLYDNKITKI--ENLEFLTNLTHLYLQNNQIEKI----------ENLENLVNLKKLYLGGNrisvveGLE 87
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568954547 577 EIPvgvfkNLFELKsinLGLNNLNKLEPFIFDDQT------SLRSLNLQKNLITSVEKDVfgpPFQNLNSLDMRFNPFD 649
Cdd:cd21340 88 NLT-----NLEELH---IENQRLPPGEKLTFDPRSlaalsnSLRVLNISGNNIDSLEPLA---PLRNLEQLDASNNQIS 155
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
102-315 |
1.73e-06 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 49.78 E-value: 1.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 102 LKVLNLQHNELSQISDqtFVFCTNLTELDLMSNSIHKIksNPFKNQKNLIKLDLSHNGLSstklgtgvqlenlqelllak 181
Cdd:cd21340 26 LKVLYLYDNKITKIEN--LEFLTNLTHLYLQNNQIEKI--ENLENLVNLKKLYLGGNRIS-------------------- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 182 nkilalRSEELEFLgnSSLRKLDLSSNPLKE-----FSPGCFQTIGKlfalllnnaqlnphlteklcwelsntSIQNLSL 256
Cdd:cd21340 82 ------VVEGLENL--TNLEELHIENQRLPPgekltFDPRSLAALSN--------------------------SLRVLNI 127
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568954547 257 ANNQLlaTSESTFSGLKwtNLTQLDLSYNNLHDVGN--GSFSYLPSLRYLSLEYNNIQRLS 315
Cdd:cd21340 128 SGNNI--DSLEPLAPLR--NLEQLDASNNQISDLEEllDLLSSWPSLRELDLTGNPVCKKP 184
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
41-319 |
3.51e-06 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 50.85 E-value: 3.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 41 LKLTHIPDDLPSNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILpllkvlnlqhnELSQisdqtf 120
Cdd:PRK15370 188 LGLTTIPACIPEQITTLILDNNELKSLPENLQGNIKTLYANSNQLTSIPATLPDTIQEM-----------ELSI------ 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 121 vfcTNLTELdlmsnsihkiksnPFKNQKNLIKLDLSHNGLSS--TKLGTGVQLENLQelllaKNKILALrSEELEflgnS 198
Cdd:PRK15370 251 ---NRITEL-------------PERLPSALQSLDLFHNKISClpENLPEELRYLSVY-----DNSIRTL-PAHLP----S 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 199 SLRKLDLSSNPLKeFSPgcfQTIGKLFALLLNNAQLNPHLTEKLCWELsntsiQNLSLANNQLLATSEStfsgLKWTnLT 278
Cdd:PRK15370 305 GITHLNVQSNSLT-ALP---ETLPPGLKTLEAGENALTSLPASLPPEL-----QVLDVSKNQITVLPET----LPPT-IT 370
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 568954547 279 QLDLSYNNLHDVGNGsfsyLP-SLRYLSLEYNNIQRLsPRSF 319
Cdd:PRK15370 371 TLDVSRNALTNLPEN----LPaALQIMQASRNNLVRL-PESL 407
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
52-112 |
3.54e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 45.21 E-value: 3.54e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568954547 52 SNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNEL 112
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRRCT |
smart00082 |
Leucine rich repeat C-terminal domain; |
646-698 |
5.93e-06 |
|
Leucine rich repeat C-terminal domain;
Pssm-ID: 214507 [Multi-domain] Cd Length: 51 Bit Score: 44.34 E-value: 5.93e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 568954547 646 NPFDCTCEsISWFVNWINQT-HTNISElstHYLCNTPHHYYGfPLKLFDTSS--CK 698
Cdd:smart00082 1 NPFICDCE-LRWLLRWLQANeHLQDPV---DLRCASPSSLRG-PLLELLHSEfkCP 51
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
100-160 |
8.23e-06 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 44.05 E-value: 8.23e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568954547 100 PLLKVLNLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGL 160
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
46-488 |
9.73e-06 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 49.46 E-value: 9.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 46 IPDDLPSNITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHN--------ELSQISD 117
Cdd:PLN00113 134 IPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNqlvgqiprELGQMKS 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 118 QTFVF----------------CTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTklgtgvqlenlqelllAK 181
Cdd:PLN00113 214 LKWIYlgynnlsgeipyeiggLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGP----------------IP 277
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 182 NKILALRseeleflgnsSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCwelSNTSIQNLSLANNQL 261
Cdd:PLN00113 278 PSIFSLQ----------KLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALT---SLPRLQVLQLWSNKF 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 262 laTSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLkraftkQSVSL 341
Cdd:PLN00113 345 --SGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRL------QDNSF 416
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 342 ASHPNIDdfsFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKtftslQTLTNETFVSLAHSPLLTLNLTKNHIS 421
Cdd:PLN00113 417 SGELPSE---FTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLAR-----NKFFGGLPDSFGSKRLENLDLSRNQFS 488
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568954547 422 KIANGTFSWLGQLRILDLGLNEIEQKLSgQEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLML 488
Cdd:PLN00113 489 GAVPRKLGSLSELMQLKLSENKLSGEIP-DELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDL 554
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
412-468 |
1.01e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 43.67 E-value: 1.01e-05
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 568954547 412 TLNLTKNHISKIANGTFSWLGQLRILDLGLNEIeQKLSGQEWRGLRNIFEIYLSYNK 468
Cdd:pfam13855 5 SLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLL-TTLSPGAFSGLPSLRYLDLSGNR 60
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
299-368 |
1.84e-05 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 42.90 E-value: 1.84e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568954547 299 PSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLkraftkqsvslaSHPNIDDFS---FQWLKYLEYLNMDDNNI 368
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDL------------SNNLLTTLSpgaFSGLPSLRYLDLSGNRL 61
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
217-582 |
6.70e-05 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 46.76 E-value: 6.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 217 CFQTIGKLFALLLNNAQLNPHLTEKLcweLS-NTSIQNLSlannQLLATSESTFSGLKWTNLT--------QLDLSYNNL 287
Cdd:PLN00113 9 CPYLIFMLFFLFLNFSMLHAEELELL---LSfKSSINDPL----KYLSNWNSSADVCLWQGITcnnssrvvSIDLSGKNI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 288 HDVGNGSFSYLPSLRYLSLEYNNIQRLSPRS-FYGLSNLRYLSLKRAFTKQSVSLASHPNiddfsfqwlkyLEYLNMDDN 366
Cdd:PLN00113 82 SGKISSAIFRLPYIQTINLSNNQLSGPIPDDiFTTSSSLRYLNLSNNNFTGSIPRGSIPN-----------LETLDLSNN 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 367 NIPSTKSNTFTGLVSLKYLSLSKTF------TSLQTLTNETFVSLAHSPLLtlnltknhiskiaNGTFSWLGQLRILD-- 438
Cdd:PLN00113 151 MLSGEIPNDIGSFSSLKVLDLGGNVlvgkipNSLTNLTSLEFLTLASNQLV-------------GQIPRELGQMKSLKwi 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 439 -LGLNeieqKLSGQ---EWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNvDISPSPFRpLRNLTILDL 514
Cdd:PLN00113 218 yLGYN----NLSGEipyEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSG-PIPPSIFS-LQKLISLDL 291
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568954547 515 SNNNIANINEDLLEGLENLEILdfqhnnlarlwkranpggpvnflkglshlhilNLESNGLD-EIPVGV 582
Cdd:PLN00113 292 SDNSLSGEIPELVIQLQNLEIL--------------------------------HLFSNNFTgKIPVAL 328
|
|
| PPP1R42 |
cd21340 |
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ... |
247-388 |
9.36e-05 |
|
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.
Pssm-ID: 411060 [Multi-domain] Cd Length: 220 Bit Score: 44.78 E-value: 9.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 247 SNTSIQNLSLANNQLlaTSESTFSGLKwtNLTQLDLSYNNLHDVGNgsFSYLPSLRYLSLEYNNIQR-----LSPRSFYG 321
Cdd:cd21340 44 FLTNLTHLYLQNNQI--EKIENLENLV--NLKKLYLGGNRISVVEG--LENLTNLEELHIENQRLPPgekltFDPRSLAA 117
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568954547 322 LSN-LRYLSLkraftkqsvslaSHPNIDDFS-FQWLKYLEYLNMDDNNIPSTK--SNTFTGLVSLKYLSLS 388
Cdd:cd21340 118 LSNsLRVLNI------------SGNNIDSLEpLAPLRNLEQLDASNNQISDLEelLDLLSSWPSLRELDLT 176
|
|
| Tlr3_TMD |
pfam17968 |
Toll-like receptor 3 trans-membrane domain; Toll-like receptor (TLR) 3 is an endosomal TLR ... |
699-731 |
9.89e-05 |
|
Toll-like receptor 3 trans-membrane domain; Toll-like receptor (TLR) 3 is an endosomal TLR that mediates immune responses against viral infections upon activation by its ligand double-stranded RNA, a replication intermediate of most viruses. TLR3 is expressed widely in the body and activates both the innate and adaptive immune systems. This entry represents the Toll-like receptor 3 trans-membrane domain which has been shown to form dimers and trimers with different surfaces for helix-helix interaction.
Pssm-ID: 465595 Cd Length: 33 Bit Score: 40.37 E-value: 9.89e-05
10 20 30
....*....|....*....|....*....|...
gi 568954547 699 DSAPFELLFIISTSMLLVFILVVLLIHIEGWRI 731
Cdd:pfam17968 1 DSAPFKLLFVISSTAVLLFIFIVLLIHFQGWRI 33
|
|
| PRK15370 |
PRK15370 |
type III secretion system effector E3 ubiquitin transferase SlrP; |
37-142 |
1.08e-04 |
|
type III secretion system effector E3 ubiquitin transferase SlrP;
Pssm-ID: 185268 [Multi-domain] Cd Length: 754 Bit Score: 46.23 E-value: 1.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 37 DCSHLKLTHIPDDLPSNITVLNLTHNQLRRLP---PTNFTRYS---------------QLAILDAGFNSISKLePElcQI 98
Cdd:PRK15370 268 DLFHNKISCLPENLPEELRYLSVYDNSIRTLPahlPSGITHLNvqsnsltalpetlppGLKTLEAGENALTSL-PA--SL 344
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 568954547 99 LPLLKVLNLQHNELSQISDqtfVFCTNLTELDLMSNSIHKIKSN 142
Cdd:PRK15370 345 PPELQVLDVSKNQITVLPE---TLPPTITTLDVSRNALTNLPEN 385
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
124-210 |
3.18e-04 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 39.43 E-value: 3.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 124 TNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSStklgtgvqlenlqelllaknkilalrSEELEFLGNSSLRKL 203
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTT--------------------------LSPGAFSGLPSLRYL 54
|
....*..
gi 568954547 204 DLSSNPL 210
Cdd:pfam13855 55 DLSGNRL 61
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
46-113 |
4.99e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 43.65 E-value: 4.99e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 46 IPDDLPS--NITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELS 113
Cdd:PLN03150 434 IPNDISKlrHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLS 503
|
|
| PLN00113 |
PLN00113 |
leucine-rich repeat receptor-like protein kinase; Provisional |
49-161 |
6.15e-04 |
|
leucine-rich repeat receptor-like protein kinase; Provisional
Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 43.68 E-value: 6.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 49 DLPSnITVLNLTHNQLRRLPPTNFtRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNELSQISDQTFVFCTNLTE 128
Cdd:PLN00113 450 DMPS-LQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVS 527
|
90 100 110
....*....|....*....|....*....|...
gi 568954547 129 LDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLS 161
Cdd:PLN00113 528 LDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLS 560
|
|
| LRR_RI |
cd00116 |
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ... |
192-388 |
6.87e-04 |
|
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Pssm-ID: 238064 [Multi-domain] Cd Length: 319 Bit Score: 42.73 E-value: 6.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 192 LEFLGNSS-LRKLDLSSNPLKEFSPGCFQTIgklfalllnnaqlnphlteklcweLSNTSIQNLSLANNQLLATSESTFS 270
Cdd:cd00116 74 LQGLTKGCgLQELDLSDNALGPDGCGVLESL------------------------LRSSSLQELKLNNNGLGDRGLRLLA 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 271 -GLK--WTNLTQLDLSYNNLHDVG----NGSFSYLPSLRYLSLEYNNIQ----RLSPRSFYGLSNLRYLSLK-RAFTKQS 338
Cdd:cd00116 130 kGLKdlPPALEKLVLGRNRLEGAScealAKALRANRDLKELNLANNGIGdagiRALAEGLKANCNLEVLDLNnNGLTDEG 209
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 568954547 339 VSLASHpniddfSFQWLKYLEYLNMDDNNIPST-----KSNTFTGLVSLKYLSLS 388
Cdd:cd00116 210 ASALAE------TLASLKSLEVLNLGDNNLTDAgaaalASALLSPNISLLTLSLS 258
|
|
| TIR_2 |
pfam13676 |
TIR domain; This is a family of Toll-like receptors. |
760-853 |
1.08e-03 |
|
TIR domain; This is a family of Toll-like receptors.
Pssm-ID: 463954 [Multi-domain] Cd Length: 118 Bit Score: 39.61 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 760 YIIHAHKDRDWV-W--EHFspmeeQDQSLKFCLEERDFEAGVLGLEAIVNSIKRSRKIIFVITHHLLKDPLCRRfkvhhA 836
Cdd:pfam13676 2 FISYAGEDRAWAeWlaDAL-----EAAGYRVWLDRWDIRPGDDWVEEIEEAIENSDRVLVVLSPNYLESPWCRA-----E 71
|
90
....*....|....*..
gi 568954547 837 VQQAIEQNLDSIILIFL 853
Cdd:pfam13676 72 WEAALADPEGRKRLIPV 88
|
|
| LRR_4 |
pfam12799 |
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a ... |
508-543 |
1.76e-03 |
|
Leucine Rich repeats (2 copies); Leucine rich repeats are short sequence motifs present in a number of proteins with diverse functions and cellular locations. These repeats are usually involved in protein-protein interactions. Each Leucine Rich Repeat is composed of a beta-alpha unit. These units form elongated non-globular structures. Leucine Rich Repeats are often flanked by cysteine rich domains.
Pssm-ID: 463713 [Multi-domain] Cd Length: 44 Bit Score: 36.84 E-value: 1.76e-03
10 20 30
....*....|....*....|....*....|....*.
gi 568954547 508 NLTILDLSNNNIANIneDLLEGLENLEILDFQHNNL 543
Cdd:pfam12799 2 NLEVLDLSNNQITDI--PPLAKLPNLETLDLSGNNK 35
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
381-444 |
3.12e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 36.73 E-value: 3.12e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568954547 381 SLKYLSLSktFTSLQTLTNETFVSLAHspLLTLNLTKNHISKIANGTFSWLGQLRILDLGLNEI 444
Cdd:pfam13855 2 NLRSLDLS--NNRLTSLDDGAFKGLSN--LKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| LRR_8 |
pfam13855 |
Leucine rich repeat; |
457-519 |
6.86e-03 |
|
Leucine rich repeat;
Pssm-ID: 404697 [Multi-domain] Cd Length: 61 Bit Score: 35.96 E-value: 6.86e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568954547 457 RNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKnvDISPSPFRPLRNLTILDLSNNNI 519
Cdd:pfam13855 1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLT--TLSPGAFSGLPSLRYLDLSGNRL 61
|
|
| PLN03150 |
PLN03150 |
hypothetical protein; Provisional |
251-330 |
7.24e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 178695 [Multi-domain] Cd Length: 623 Bit Score: 40.18 E-value: 7.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568954547 251 IQNLSLANNQLLATSESTFSGLKwtNLTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSL 330
Cdd:PLN03150 420 IDGLGLDNQGLRGFIPNDISKLR--HLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNL 497
|
|
|