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Conserved domains on  [gi|568993155|ref|XP_006521375|]
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ly6/PLAUR domain-containing protein 2 isoform X1 [Mus musculus]

Protein Classification

Ly-6/uPAR domain-containing protein( domain architecture ID 10061478)

LU (Ly-6 antigen/uPA receptor-like) domain-containing protein similar to GPI-linked cell-surface glycoproteins (Ly-6 family, CD59, thymocyte B cell antigen, Sgp-2)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
TFP_LU_ECD_LYPD2 cd23620
extracellular domain (ECD) found in Ly6/PLAUR domain-containing protein 2 (LYPD2) and similar ...
22-100 1.81e-41

extracellular domain (ECD) found in Ly6/PLAUR domain-containing protein 2 (LYPD2) and similar proteins; LYPD2 is a lymphocyte antigen-6 family protein. It contains an extracellular domain (ECD) that belongs to Ly-6 antigen/uPA receptor-like (LU) superfamily and exhibits a snake toxin-like fold (also known as three-finger toxin/3FTx fold or three-fingered protein/TFP domain fold).


:

Pssm-ID: 467140  Cd Length: 79  Bit Score: 131.98  E-value: 1.81e-41
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568993155  22 ALQCYTCANPVSASNCVTTTHCHINETMCKTTLYSLEIVFPFLGDSTVTKSCASKCEPSDVDGIGQTRPVSCCNSDLCN 100
Cdd:cd23620    1 ALRCYVCPEPTSASDCVTITTCHTNETMCKTTLYSREIVYPFLGDSTVTKSCASKCEPSDVDGIGQTRPVSCCNTDLCN 79
 
Name Accession Description Interval E-value
TFP_LU_ECD_LYPD2 cd23620
extracellular domain (ECD) found in Ly6/PLAUR domain-containing protein 2 (LYPD2) and similar ...
22-100 1.81e-41

extracellular domain (ECD) found in Ly6/PLAUR domain-containing protein 2 (LYPD2) and similar proteins; LYPD2 is a lymphocyte antigen-6 family protein. It contains an extracellular domain (ECD) that belongs to Ly-6 antigen/uPA receptor-like (LU) superfamily and exhibits a snake toxin-like fold (also known as three-finger toxin/3FTx fold or three-fingered protein/TFP domain fold).


Pssm-ID: 467140  Cd Length: 79  Bit Score: 131.98  E-value: 1.81e-41
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568993155  22 ALQCYTCANPVSASNCVTTTHCHINETMCKTTLYSLEIVFPFLGDSTVTKSCASKCEPSDVDGIGQTRPVSCCNSDLCN 100
Cdd:cd23620    1 ALRCYVCPEPTSASDCVTITTCHTNETMCKTTLYSREIVYPFLGDSTVTKSCASKCEPSDVDGIGQTRPVSCCNTDLCN 79
LU smart00134
Ly-6 antigen / uPA receptor -like domain; Three-fold repeated domain in urokinase-type ...
23-101 2.01e-05

Ly-6 antigen / uPA receptor -like domain; Three-fold repeated domain in urokinase-type plasminogen activator receptor; occurs singly in other GPI-linked cell-surface glycoproteins (Ly-6 family, CD59, thymocyte B cell antigen, Sgp-2). Topology of these domains is similar to that of snake venom neurotoxins.


Pssm-ID: 214530  Cd Length: 85  Bit Score: 40.21  E-value: 2.01e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568993155    23 LQCYTCANPvSASNCVTTTHCHINETMCKTTLYSLEIVFpflGDSTVTKSCA--SKCEPSDVDGIGQTR---PVSCCNSD 97
Cdd:smart00134   1 LQCYSCTGN-PDSSCSSEEECRSPDDVCLTVVAEVISDS---RGSVVYKGCAtsPICPGSHGYEINLTIaflKVSCCQTD 76

                   ....
gi 568993155    98 LCNV 101
Cdd:smart00134  77 LCNA 80
UPAR_LY6 pfam00021
u-PAR/Ly-6 domain; This extracellular disulphide bond rich domain is related to pfam00087.
25-100 2.40e-04

u-PAR/Ly-6 domain; This extracellular disulphide bond rich domain is related to pfam00087.


Pssm-ID: 394978  Cd Length: 77  Bit Score: 37.13  E-value: 2.40e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568993155   25 CYTCANpVSASNCVTTTHCHINETMCKTTlySLEIVFPFLGDSTVTKSCA-SKCEPSDVDGIGQTRP---VSCCNSDLCN 100
Cdd:pfam00021   1 CYSCLG-VSNEDCLSEVTCPLSDGQCVTT--TLELPEGNLRGTVVSKGCArSSCPRLLSDFINGGIIsvsESCCQSDLCN 77
 
Name Accession Description Interval E-value
TFP_LU_ECD_LYPD2 cd23620
extracellular domain (ECD) found in Ly6/PLAUR domain-containing protein 2 (LYPD2) and similar ...
22-100 1.81e-41

extracellular domain (ECD) found in Ly6/PLAUR domain-containing protein 2 (LYPD2) and similar proteins; LYPD2 is a lymphocyte antigen-6 family protein. It contains an extracellular domain (ECD) that belongs to Ly-6 antigen/uPA receptor-like (LU) superfamily and exhibits a snake toxin-like fold (also known as three-finger toxin/3FTx fold or three-fingered protein/TFP domain fold).


Pssm-ID: 467140  Cd Length: 79  Bit Score: 131.98  E-value: 1.81e-41
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568993155  22 ALQCYTCANPVSASNCVTTTHCHINETMCKTTLYSLEIVFPFLGDSTVTKSCASKCEPSDVDGIGQTRPVSCCNSDLCN 100
Cdd:cd23620    1 ALRCYVCPEPTSASDCVTITTCHTNETMCKTTLYSREIVYPFLGDSTVTKSCASKCEPSDVDGIGQTRPVSCCNTDLCN 79
TFP_LU_ECD_SLURP1_like cd23560
extracellular domain (ECD) found in the secreted Ly-6/uPAR-related protein 1 (SLURP-1)-like ...
23-100 3.11e-32

extracellular domain (ECD) found in the secreted Ly-6/uPAR-related protein 1 (SLURP-1)-like family; The SLURP-1-like family includes SLURP-1 and Ly6/PLAUR domain-containing protein 2 (LYPD2). SLURP-1 (also called ARS component B, or ARS (component B)-81/S, or anti-neoplastic urinary protein (ANUP)) has an antitumor activity. It was found to be a marker of late differentiation of the skin. It is implicated in maintaining the physiological and structural integrity of the keratinocyte layers of the skin. In vitro SLURP-1 down-regulates keratinocyte proliferation; the function may involve the proposed role as modulator of nicotinic acetylcholine receptors (nAChRs) activity. In vitro it inhibits alpha-7-dependent nAChR currents in an allosteric manner. In T cells SLURP-1 may be involved in regulation of intracellular Ca(2+) signaling. It may also have an immunomodulatory function in the cornea. The function may implicate a possible role as a scavenger receptor for PLAU thereby blocking PLAU-dependent functions of PLAUR such as in cell migration and proliferation. LYPD2 is a lymphocyte antigen-6 family protein and shows high sequence similarity with SLURP-1. Members in this family contain an extracellular domain (ECD) that belongs to Ly-6 antigen/uPA receptor-like (LU) superfamily and exhibits a snake toxin-like fold (also known as three-finger toxin/3FTx fold or three-fingered protein/TFP domain fold).


Pssm-ID: 467090  Cd Length: 78  Bit Score: 108.69  E-value: 3.11e-32
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568993155  23 LQCYTCANPVSASNCVTTTHCHINETMCKTTLYSLEIVFPFLGDSTVTKSCASKCEPSDVDGIGQTRPVSCCNSDLCN 100
Cdd:cd23560    1 LRCYTCPEPTDSSLCTTIVNCSPNETACKTTLYSVDSGYPFFGNITVTRGCASECIPSDPDGIGETHPISCCNTDLCN 78
TFP_LU_ECD_GPIHBP1 cd23575
extracellular domain (ECD) found in glycosylphosphatidylinositol-anchored high density ...
22-105 1.01e-16

extracellular domain (ECD) found in glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1 (GPI-HBP1) and similar proteins; GPI-HBP1 (also called GPI-anchored HDL-binding protein 1, or high density lipoprotein-binding protein 1) is an endothelial cell transporter for lipoprotein lipase. It mediates the transport of lipoprotein lipase LPL from the basolateral to the apical surface of endothelial cells in capillaries and anchors LPL on the surface of endothelial cells in the lumen of blood capillaries. GPI-HBP1 protects LPL against loss of activity, and against ANGPTL4-mediated unfolding. Thereby, it plays an important role in lipolytic processing of chylomicrons by LPL, triglyceride metabolism and lipid homeostasis. GPI-HBP1 binds chylomicrons and phospholipid particles that contain APOA5. It also binds high-density lipoprotein (HDL) and plays a role in the uptake of lipids from HDL. GPI-HBP1 contains an extracellular domain (ECD), which belongs to Ly-6 antigen/uPA receptor-like (LU) superfamily and exhibits a snake toxin-like fold (also known as three-finger toxin/3FTx fold or three-fingered protein/TFP domain fold).


Pssm-ID: 467105  Cd Length: 83  Bit Score: 69.28  E-value: 1.01e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568993155  22 ALQCYTCANPVSASNCVTTTHCHINETMCKTTLYSLEIVFPFLgdSTVTKSCASKCEPSDVDGIGQTRPVSCCNSDLCNV 101
Cdd:cd23575    2 SLKCYTCVSAHSNSDCLTETNCSSSDTYCKTLVASASGGSGSL--TTITKWCASSCTPSTRTVEGTKVTVSCCQTDLCNV 79

                 ....
gi 568993155 102 DGAP 105
Cdd:cd23575   80 SGAQ 83
TFP_LU_ECD_PSCA cd23573
extracellular domain (ECD) found in prostate stem cell antigen (PSCA) and similar proteins; ...
22-103 7.56e-14

extracellular domain (ECD) found in prostate stem cell antigen (PSCA) and similar proteins; PSCA may be involved in the regulation of cell proliferation. It has a cell-proliferation inhibition activity in vitro. PSCA may also act as a modulator of nicotinic acetylcholine receptors (nAChRs) activity. In vitro it inhibits nicotine-induced signaling probably implicating alpha-3:beta-2- or alpha-7-containing nAChRs. PSCA contains an extracellular domain (ECD), which belongs to Ly-6 antigen/uPA receptor-like (LU) superfamily and exhibits a snake toxin-like fold (also known as three-finger toxin/3FTx fold or three-fingered protein/TFP domain fold).


Pssm-ID: 467103  Cd Length: 78  Bit Score: 61.69  E-value: 7.56e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568993155  22 ALQCYTCANPVSASNCVTTTHCHINETMCKTTLYSLEIVFpflgdSTVTKSCASKCEPSDVDGIGQTRPVSCCNSDLCNV 101
Cdd:cd23573    2 SLQCYTCKAQLSNSNCQTETPCRENAKACKTDVIRAVGLL-----KVISKECSSSCTEDYQDYFVGKRNITCCSTDLCNV 76

                 ..
gi 568993155 102 DG 103
Cdd:cd23573   77 NG 78
TFP_LU_ECD_SLURP1 cd23619
extracellular domain (ECD) found in secreted Ly-6/uPAR-related protein 1 (SLURP-1) and similar ...
23-100 5.37e-12

extracellular domain (ECD) found in secreted Ly-6/uPAR-related protein 1 (SLURP-1) and similar proteins; SLURP-1 (also called ARS component B, or ARS (component B)-81/S, or anti-neoplastic urinary protein (ANUP)) has antitumor activity. It was found to be a marker of late differentiation of the skin. It is implicated in maintaining the physiological and structural integrity of the keratinocyte layers of the skin. In vitro SLURP-1 down-regulates keratinocyte proliferation; the function may involve the proposed role as modulator of nicotinic acetylcholine receptors (nAChRs) activity. In vitro it inhibits alpha-7-dependent nAChR currents in an allosteric manner. In T cells SLURP-1 may be involved in regulation of intracellular Ca(2+) signaling. It may also have an immunomodulatory function in the cornea. The function may implicate a possible role as a scavenger receptor for PLAU thereby blocking PLAU-dependent functions of PLAUR such as in cell migration and proliferation. SLURP-1 contains an extracellular domain (ECD) that belongs to Ly-6 antigen/uPA receptor-like (LU) superfamily and exhibits a snake toxin-like fold (also known as three-finger toxin/3FTx fold or three-fingered protein/TFP domain fold).


Pssm-ID: 467139  Cd Length: 78  Bit Score: 57.12  E-value: 5.37e-12
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568993155  23 LQCYTCANPVSASNCVTTTHCHINETMCKTTLYSLEIVFPFLGDSTVTKSCASKCEPSDVDGIGQTRPVSCCNSDLCN 100
Cdd:cd23619    1 LKCYTCKEPMTSASCRTITRCKPEDTACMTTLVTVEAEYPFNQSPVVTRSCSSSCVATDPDSIGAAHLIFCCFRDLCN 78
TFP_LU_ECD_Ly6E cd23543
extracellular domain (ECD) found in lymphocyte antigen 6E (Ly-6E) and similar proteins; Ly-6E ...
22-100 8.89e-09

extracellular domain (ECD) found in lymphocyte antigen 6E (Ly-6E) and similar proteins; Ly-6E (also called retinoic acid-induced gene E protein (RIG-E), or stem cell antigen 2 (SCA-2), or thymic shared antigen 1 (TSA-1)) is a GPI-anchored cell surface protein that regulates T-lymphocytes proliferation, differentiation, and activation. It restricts the entry of human coronaviruses, including SARS-CoV, MERS-CoV and SARS-CoV-2, by interfering with spike protein-mediated membrane fusion. It plays an essential role in placenta formation by acting as the main receptor for syncytin-A (SynA). It may also act as a modulator of nicotinic acetylcholine receptors (nAChRs) activity. Ly-6E contains an extracellular domain (ECD) which belongs to Ly-6 antigen/uPA receptor-like (LU) superfamily and exhibits a snake toxin-like fold (also known as three-finger toxin/3FTx fold or three-fingered protein/TFP domain fold).


Pssm-ID: 467073  Cd Length: 78  Bit Score: 48.89  E-value: 8.89e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568993155  22 ALQCYTCANPVSASNCVTTTHCHINETMCKTTLYSLEIVFPFlgDSTVTKSCASKC-EPSDVDGIGQTRpVSCCNSDLCN 100
Cdd:cd23543    2 SLYCYTCENQSSNWNCLKPTKCSDNDKYCVTTVASGGTGSSS--GVRITKKCSPKCpETNVNIGIASVS-TSCCQSSLCN 78
TFP_LU_ECD_Ly6M cd23552
extracellular domain (ECD) found in Mus musculus Ly-6 family protein Ly-6M and similar ...
17-100 6.75e-07

extracellular domain (ECD) found in Mus musculus Ly-6 family protein Ly-6M and similar proteins; Ly-6M is a novel member of the Ly-6 family of hematopoietic proteins. It contains an extracellular domain (ECD) which belongs to Ly-6 antigen/uPA receptor-like (LU) superfamily and exhibits a snake toxin-like fold (also known as three-finger toxin/3FTx fold or three-fingered protein/TFP domain fold).


Pssm-ID: 467082  Cd Length: 80  Bit Score: 44.08  E-value: 6.75e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568993155  17 GELAMALQCYTCanpVSASNCVTTTHCHINETMCKTTLYSleivfPFLGDSTVTKSCASKCepSDVDGIGQTRPVSCCNS 96
Cdd:cd23552    1 GSSAQALKCHEC---KGIEDCYNPTSCNNQSRYCLTTWYT-----PPGEKTTVTKSCAYTC--PDAPESLANSKASCCNT 70

                 ....
gi 568993155  97 DLCN 100
Cdd:cd23552   71 DLCN 74
TFP_LU_ECD_Ly6D cd23542
extracellular domain (ECD) found in lymphocyte antigen 6D (Ly-6D) and similar proteins; Ly-6D ...
20-100 1.55e-05

extracellular domain (ECD) found in lymphocyte antigen 6D (Ly-6D) and similar proteins; Ly-6D (also called E48 antigen) is a GPI-anchored molecule apparently involved in keratinocyte cell-cell adhesion. It may act as a specification marker at earliest stage specification of lymphocytes between B- and T-cell development. Ly-6D contains an extracellular domain (ECD) which belongs to Ly-6 antigen/uPA receptor-like (LU) superfamily and exhibits a snake toxin-like fold (also known as three-finger toxin/3FTx fold or three-fingered protein/TFP domain fold).


Pssm-ID: 467072  Cd Length: 79  Bit Score: 40.48  E-value: 1.55e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568993155  20 AMALQCYTCAnpvSASNCVTTTHCHINETMCKTTlysleIVFPfLGDSTVTKSCASKCEPSDVD---GIGQTRpVSCCNS 96
Cdd:cd23542    3 ANALQCHVCN---SSSNCTNPVNCEGSERYCKTT-----TVVQ-PSGNLVKKGCAETCPPSTSRqqvGSGISS-VTCCQG 72

                 ....
gi 568993155  97 DLCN 100
Cdd:cd23542   73 DLCN 76
LU smart00134
Ly-6 antigen / uPA receptor -like domain; Three-fold repeated domain in urokinase-type ...
23-101 2.01e-05

Ly-6 antigen / uPA receptor -like domain; Three-fold repeated domain in urokinase-type plasminogen activator receptor; occurs singly in other GPI-linked cell-surface glycoproteins (Ly-6 family, CD59, thymocyte B cell antigen, Sgp-2). Topology of these domains is similar to that of snake venom neurotoxins.


Pssm-ID: 214530  Cd Length: 85  Bit Score: 40.21  E-value: 2.01e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568993155    23 LQCYTCANPvSASNCVTTTHCHINETMCKTTLYSLEIVFpflGDSTVTKSCA--SKCEPSDVDGIGQTR---PVSCCNSD 97
Cdd:smart00134   1 LQCYSCTGN-PDSSCSSEEECRSPDDVCLTVVAEVISDS---RGSVVYKGCAtsPICPGSHGYEINLTIaflKVSCCQTD 76

                   ....
gi 568993155    98 LCNV 101
Cdd:smart00134  77 LCNA 80
TFP_LU_ECD_Prod1 cd23583
extracellular domain (ECD) found in Notophthalmus viridescens Prod1 and similar proteins; ...
23-100 6.46e-05

extracellular domain (ECD) found in Notophthalmus viridescens Prod1 and similar proteins; Prod1 is a member of the three-finger protein superfamily implicated in salamander limb regeneration. It contains an extracellular domain (ECD), which belongs to Ly-6 antigen/uPA receptor-like (LU) superfamily and exhibits a snake toxin-like fold (also known as three-finger toxin/3FTx fold or three-fingered protein/TFP domain fold).


Pssm-ID: 467113  Cd Length: 68  Bit Score: 38.38  E-value: 6.46e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568993155  23 LQCYTCANPvsASNCVTTTHCHINETMCKTTLYSleivfpflgdSTVTKSCASKCEPSDVD--GIGQTRPVSCCNSDLCN 100
Cdd:cd23583    1 LQCYTRQGP--RSVGVTVTTCNEDQTMCLFILLP----------SSMIQECKTKQQCAEVLeeATAIGYPAKCCSEDLCN 68
TFP cd00117
three-fingered protein (TFP) fold found in Ly6/uPAR (LU) and snake toxin superfamily; The LU ...
23-100 1.16e-04

three-fingered protein (TFP) fold found in Ly6/uPAR (LU) and snake toxin superfamily; The LU (also known as Ly-6 antigen/uPA receptor)-like extracellular domain (ECD) occurs singly in GPI-linked cell-surface glycoproteins (Ly-6 family, CD59, thymocyte B cell antigen, Sgp-2) or as three-fold repeated domain in urokinase-type plasminogen activator receptor. It is a structural domain involved in protein-protein interactions, tolerating an unusual degree of variation and binding with high specificity to a broad spectrum of targets. The snake toxin domain is present in short and long neurotoxins, cytotoxins, and short toxins, and in other miscellaneous venom peptides. The toxin acts by binding to the nicotinic acetylcholine receptors in the postsynaptic membrane of skeletal muscles and preventing the binding of acetylcholine, thereby blocking the excitation of muscles. Both the LU-like ECD and the snake toxin domain belong to three-fingered protein (TFP) fold, which is characterized by containing 70 to 100 amino acids including eight to ten cysteine residues spaced at conserved distances.


Pssm-ID: 467060  Cd Length: 81  Bit Score: 38.24  E-value: 1.16e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568993155  23 LQCYTC---ANPVSASNCVTTTHCHINETMCKTTLYSLEIvfpflGDSTVTKSCASKCEPSDVD-----GIGQTRPVSCC 94
Cdd:cd00117    1 LKCYQCnssNDPNCCNSSPTLVTCSSPETFCRKIVGKVGG-----GETLVIRGCATECECGCTEccsgtGTSGTTCTSCC 75

                 ....*.
gi 568993155  95 NSDLCN 100
Cdd:cd00117   76 DTDLCN 81
UPAR_LY6 pfam00021
u-PAR/Ly-6 domain; This extracellular disulphide bond rich domain is related to pfam00087.
25-100 2.40e-04

u-PAR/Ly-6 domain; This extracellular disulphide bond rich domain is related to pfam00087.


Pssm-ID: 394978  Cd Length: 77  Bit Score: 37.13  E-value: 2.40e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568993155   25 CYTCANpVSASNCVTTTHCHINETMCKTTlySLEIVFPFLGDSTVTKSCA-SKCEPSDVDGIGQTRP---VSCCNSDLCN 100
Cdd:pfam00021   1 CYSCLG-VSNEDCLSEVTCPLSDGQCVTT--TLELPEGNLRGTVVSKGCArSSCPRLLSDFINGGIIsvsESCCQSDLCN 77
TFP_LU_ECD_Ly6PGE cd23553
extracellular domain (ECD) found in Danio rerio lymphocyte antigen 6 family member PGE (Ly6PGE) ...
23-100 4.60e-04

extracellular domain (ECD) found in Danio rerio lymphocyte antigen 6 family member PGE (Ly6PGE) and similar proteins; Ly6PGE is an uncharacterized Ly-6/uPAR family protein. It contains an extracellular domain (ECD) which belongs to Ly-6 antigen/uPA receptor-like (LU) superfamily and exhibits a snake toxin-like fold (also known as three-finger toxin/3FTx fold or three-fingered protein/TFP domain fold).


Pssm-ID: 467083  Cd Length: 77  Bit Score: 36.29  E-value: 4.60e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568993155  23 LQCYTCANPVSASNCVTTTHCHINETMCKTTLYSLEivfpflGDSTVTKSCASK--CEPSDVDGIGQTRP---VSCCNSD 97
Cdd:cd23553    1 LKCYQCVGSEDDCNKQKSVVCPSSHDRCITVTGRNE------GKTTVTKSCSYKsfCDQASESCSLVKREgcnVSCCDSD 74

                 ...
gi 568993155  98 LCN 100
Cdd:cd23553   75 GCN 77
Toxin_TOLIP pfam00087
Snake toxin and toxin-like protein; This family predominantly includes venomous neurotoxins ...
23-100 1.55e-03

Snake toxin and toxin-like protein; This family predominantly includes venomous neurotoxins and cytotoxins from snakes, but also structurally similar (non-snake) toxin-like proteins (TOLIPs) such as Lymphocyte antigen 6D and Ly6/PLAUR domain-containing protein. Snake toxins are short proteins with a compact, disulphide-rich structure. TOLIPs have similar structural features (abundance of spaced cysteine residues, a high frequency of charge residues, a signal peptide for secretion and a compact structure) but, are not associated with a venom gland or poisonous function. They are endogenous animal proteins that are not restricted to poisonous animals.


Pssm-ID: 395040  Cd Length: 70  Bit Score: 34.90  E-value: 1.55e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568993155   23 LQCYTCANpvsASNCVTTTHCHINETMCKTTLYSleivfPFLGDSTVTKSCASKCEPSDVDGIGQTRPVSCCNSDLCN 100
Cdd:pfam00087   1 LRCHNCAA---AGNCVQPETCQDNTRYCLTLWNS-----PPGHRTHVIKGCAYTCPVTQESLNISRASDCCCETDLCN 70
TFP_LU_ECD_CD59 cd23554
extracellular domain (ECD) found in CD59 glycoprotein and similar proteins; CD59 (also called ...
23-100 3.63e-03

extracellular domain (ECD) found in CD59 glycoprotein and similar proteins; CD59 (also called 1F5 antigen, or 20 kDa homologous restriction factor, or HRF-20, or MAC-inhibitory protein (MAC-IP), or MEM43 antigen, or membrane attack complex inhibition factor (MACIF), or membrane inhibitor of reactive lysis (MIRL), or protectin) is an LY-6-like protein expressed in human lymphoid cells and inhibits the action of the complement membrane attack complex (MAC) on homologous cells. It acts by binding to the C8 and/or C9 complements of the assembling MAC, thereby preventing incorporation of the multiple copies of C9 required for complete formation of the osmolytic pore. This inhibitor appears to be species-specific. CD59 is also involved in signal transduction for T-cell activation complexed to a protein tyrosine kinase. CD59 contains an extracellular domain (ECD) which belongs to Ly-6 antigen/uPA receptor-like (LU) superfamily and exhibits a snake toxin-like fold (also known as three-finger toxin/3FTx fold or three-fingered protein/TFP domain fold).


Pssm-ID: 467084  Cd Length: 70  Bit Score: 33.83  E-value: 3.63e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568993155  23 LQCYTCANPVSasNCVTTTHCHINETMCKTTLYSleivfpflgdSTVTKSC--ASKCepsDVDGIGQTRPVS-----CCN 95
Cdd:cd23554    1 LKCYNCPNPTS--NCNTNVTCSSNLDACLIVKAG----------NRIYRQCwkYSDC---NFDFISERFGESnfkyrCCQ 65

                 ....*
gi 568993155  96 SDLCN 100
Cdd:cd23554   66 KDLCN 70
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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