|
Name |
Accession |
Description |
Interval |
E-value |
| Mitofilin |
pfam09731 |
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. ... |
43-709 |
0e+00 |
|
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. Mitofilin is enriched in the narrow space between the inner boundary and the outer membranes, where it forms a homotypic interaction and assembles into a large multimeric protein complex. The first 78 amino acids contain a typical amino-terminal-cleavable mitochondrial presequence rich in positive-charged and hydroxylated residues and a membrane anchor domain. In addition, it has three centrally located coiled coil domains.
Pssm-ID: 430783 [Multi-domain] Cd Length: 618 Bit Score: 575.55 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 43 AGKIAGAGLLFVGGGIGGTILYAKWDSHFRESVEKTIPYSDKLFGMVLGSAPYTVPlpkKPIQSGPLKISSVSEVMTDSE 122
Cdd:pfam09731 4 FGKFFVALVLIVGVGYGGVVLYAYKDDNFRDFFEEYIPYGEEVVLYALGEDPPLAP---KPKTFRPLQPSVVSAVTGESK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 123 LPMAQTQETNGDTPASAASTgaaqiisAAGDPAPEVEHEDTINTECPNTDEGTStfvtAALAKSLEDALNQTATVTRQTI 202
Cdd:pfam09731 81 EPKEEKKQVKIPRQSGVSSE-------VAEEEKEATKDAAEAKAQLPKSEQEKE----KALEEVLKEAISKAESATAVAK 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 203 TAQNAAVQAVKAHSSTLKTAMDNSEIAGEKKSAQWRTVEGALKErrkavdeaadallkakeeleKMKTIIEDAKKREIAG 282
Cdd:pfam09731 150 EAKDDAIQAVKAHTDSLKEASDTAEISREKATDSALQKAEALAE--------------------KLKEVINLAKQSEEEA 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 283 ATPYITAAEEKLHSMIVDLDSVVKKVQAAQSEAKVVSQYHELVVQARDDFRKELDSITPDITPGWKGMSIsdlagtLSTD 362
Cdd:pfam09731 210 APPLLDAAPETPPKLPEHLDNVEEKVEKAQSLAKLVDQYKELVASERIVFQQELVSIFPDIIPVLKEDNL------LSND 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 363 DLNALIAHAHRRIDQLNRELAQQKATEKQHIELALERQKlEEKRAFDSAVAKALEHHRS----EIQAEQDRKVEEVRDAM 438
Cdd:pfam09731 284 DLNSLIAHAHREIDQLSKKLAELKKREEKHIERALEKQK-EELDKLAEELSARLEEVRAadeaQLRLEFEREREEIRESY 362
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 439 ENEMRTQLRRQAAAHTDHLRDVLKVQEQELKFEFEQDLSEKLSEQElefhrrsqeqmDNFTLDINTAYARLRGIEQAVQS 518
Cdd:pfam09731 363 EEKLRTELERQAEAHEEHLKDVLVEQEIELQREFLQDIKEKVEEER-----------AGRLLKLNELLANLKGLEKATSS 431
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 519 HAVAEEEARKAHQLWLSVEALKYSMKTSSAEMPTIPLGSAVEAIRVSCSDNEFTQALTAAIPPESLTRGVYSEETLRARF 598
Cdd:pfam09731 432 HSEVEDENRKAQQLWLAVEALRSTLEDGSADSRPRPLVRELKALKELASDDEVVKAALASLPEEAYQRGVYTEAALRERF 511
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 599 YAVQKLAGRVAMIDETKNSLYQYFLSYLQSLLLFPPKQlkppAELYPEDINTFKLLSYASYCIEHGDLELAAKFVNQLKG 678
Cdd:pfam09731 512 RRVAKEVRKVSLIDPEGAGLLSHALSYLLSKLMFKPKQ----GEADPAGDDVESILARAEYYLEEGDLDSAAREMNSLKG 587
|
650 660 670
....*....|....*....|....*....|.
gi 1958769478 679 ESRRVAQDWLKEARMTLETKQIVEILTTYAS 709
Cdd:pfam09731 588 WSKKLASDWLKEARRRLEVQQALELLQAEAA 618
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
205-540 |
2.58e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 60.93 E-value: 2.58e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 205 QNAAVQAVKAHSS-TLKTAMDNSEIAGEKKSAQWRTVEGALK--ERRKAVDEAADALLKAKEELEKMKTIIEDAKKR--- 278
Cdd:PTZ00121 1268 RQAAIKAEEARKAdELKKAEEKKKADEAKKAEEKKKADEAKKkaEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAaea 1347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 279 ---EIAGATPYITAAEEKLHSMIVDLDSVVKKVQAAQSEAKVVSQYHELVVQARDDfRKELDSITPDITPGWKGMSISDL 355
Cdd:PTZ00121 1348 akaEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEED-KKKADELKKAAAAKKKADEAKKK 1426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 356 AGTLSTDDLNALIAHAHRRIDQLNR--------ELAQQKATEKQHIELAleRQKLEEKRAFDSAVAKALEHHR----SEI 423
Cdd:PTZ00121 1427 AEEKKKADEAKKKAEEAKKADEAKKkaeeakkaEEAKKKAEEAKKADEA--KKKAEEAKKADEAKKKAEEAKKkadeAKK 1504
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 424 QAEQDRKVEEVRDAMENEMRTQLRR-QAAAHTDHLRDVLKVQEQElkfefEQDLSEKLSEQElefHRRSQEQMDNFTLDI 502
Cdd:PTZ00121 1505 AAEAKKKADEAKKAEEAKKADEAKKaEEAKKADEAKKAEEKKKAD-----ELKKAEELKKAE---EKKKAEEAKKAEEDK 1576
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 1958769478 503 NTAYAR---LRGIEQA---------VQSHAVAEEEARKAHQLWLSVEALK 540
Cdd:PTZ00121 1577 NMALRKaeeAKKAEEArieevmklyEEEKKMKAEEAKKAEEAKIKAEELK 1626
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
208-532 |
4.15e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.87 E-value: 4.15e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 208 AVQAVKAHssTLKTAMDnsEIAGEKKSAQWRTVEGALKERRKAVDEAADALLKAKEELEKMKTIIEDAKKReiagatpyI 287
Cdd:COG1196 209 AEKAERYR--ELKEELK--ELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLE--------L 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 288 TAAEEKLHSMIVDLDSVVKKVQAAQSEAKVVSQYHELVVQARDDFRKELDSITpditpgwkgMSISDLAGTLstDDLNAL 367
Cdd:COG1196 277 EELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELE---------EELEELEEEL--EELEEE 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 368 IAHAHRRIDQLNRELAQQKAT--EKQHIELALERQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKVEEVRDAMENEMRTQ 445
Cdd:COG1196 346 LEEAEEELEEAEAELAEAEEAllEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEE 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 446 LRRQAAAHTDHLRDVLKVQEQELKFEFEQDLSEKLSEQELEFHRRS----QEQMDNFTLDINTAYARLRGIEQAVQSHAV 521
Cdd:COG1196 426 LEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEaallEAALAELLEELAEAAARLLLLLEAEADYEG 505
|
330
....*....|.
gi 1958769478 522 AEEEARKAHQL 532
Cdd:COG1196 506 FLEGVKAALLL 516
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
211-518 |
2.00e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 51.60 E-value: 2.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 211 AVKAHSSTLKTamdNSEIagEKKSAQWRTVEGALKERRKAVDEAADALLKAKEELEKMKTIIEDaKKREIAGATPYITAA 290
Cdd:TIGR02168 665 SAKTNSSILER---RREI--EELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEE-LSRQISALRKDLARL 738
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 291 EEKLHSMIVDLDSVVKKVQAAQSEAKVVSQYHELVVQARDDFRKELDSITPDITPGWKGMSISDLAGTLSTDDLNALIAH 370
Cdd:TIGR02168 739 EAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEE 818
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 371 AHRRIDQLNRELAQQKATEKQHIELALERQKLEEKRAFDSAV-----------AKALEHHrSEIQAEQDRKVEEVRDAME 439
Cdd:TIGR02168 819 AANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEieeleelieelESELEAL-LNERASLEEALALLRSELE 897
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 440 NEM---------RTQLRRQAAAHTDHLRDvLKVQEQELKFEFEQdLSEKLSEQ---ELEFHrrsQEQMDNFTLDINTAYA 507
Cdd:TIGR02168 898 ELSeelreleskRSELRRELEELREKLAQ-LELRLEGLEVRIDN-LQERLSEEyslTLEEA---EALENKIEDDEEEARR 972
|
330
....*....|.
gi 1958769478 508 RLRGIEQAVQS 518
Cdd:TIGR02168 973 RLKRLENKIKE 983
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
198-493 |
2.55e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.07 E-value: 2.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 198 TRQTITAQNAAVQAVKAHSSTLKTAmdnseiagekkSAQWRTVEGALKERRKAVDEAADALLKAKEELEKMKTIIEDAKK 277
Cdd:COG4913 666 AEREIAELEAELERLDASSDDLAAL-----------EEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQD 734
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 278 R----EIAGATPYITAAEEKLHSmiVDLDSVVKKVQA------AQSEAKVVSQYHELV--------------------VQ 327
Cdd:COG4913 735 RleaaEDLARLELRALLEERFAA--ALGDAVERELREnleeriDALRARLNRAEEELEramrafnrewpaetadldadLE 812
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 328 ARDDFRKELDSITPDITPG-----------WKGMSISDLAGTLSTDdlnalIAHAHRRIDQLNRELAQQKATEKQHIELA 396
Cdd:COG4913 813 SLPEYLALLDRLEEDGLPEyeerfkellneNSIEFVADLLSKLRRA-----IREIKERIDPLNDSLKRIPFGPGRYLRLE 887
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 397 LERQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKVEEVRDAMEnemrtQLRRQAAAHTDH-LRDVLKVQEQelkFEFEQD 475
Cdd:COG4913 888 ARPRPDPEVREFRQELRAVTSGASLFDEELSEARFAALKRLIE-----RLRSEEEESDRRwRARVLDVRNH---LEFDAE 959
|
330
....*....|....*...
gi 1958769478 476 LSEKLSEQELEFHRRSQE 493
Cdd:COG4913 960 EIDREDGEEVETYSSSGG 977
|
|
| ARGLU |
pfam15346 |
Arginine and glutamate-rich 1; ARGLU, arginine and glutamate-rich 1 protein family, is ... |
397-531 |
7.72e-06 |
|
Arginine and glutamate-rich 1; ARGLU, arginine and glutamate-rich 1 protein family, is required for the oestrogen-dependent expression of ESR1 target genes. It functions in cooperation with MED1. The family of proteins is found in eukaryotes.
Pssm-ID: 405931 [Multi-domain] Cd Length: 151 Bit Score: 46.20 E-value: 7.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 397 LERQKLEE------KRAFDSAVAKALEHHRSEIQAEQDRKVEEVRDAMENEMRTQLRRQAAAhtdhlrdvlKVQEQELKF 470
Cdd:pfam15346 3 AESKLLEEetarrvEEAVAKRVEEELEKRKDEIEAEVERRVEEARKIMEKQVLEELEREREA---------ELEEERRKE 73
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958769478 471 EFEQDLSEKLSEQELEFHRRSQEQMDNFTLDINTAYARLRGIEQAVQSHAVAEEEARKAHQ 531
Cdd:pfam15346 74 EEERKKREELERILEENNRKIEEAQRKEAEERLAMLEEQRRMKEERQRREKEEEEREKREQ 134
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
245-540 |
2.07e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 48.01 E-value: 2.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 245 KERRKAVDEAA----------DALLK---AKEELEKMKTII--------------EDAKK-----------------REI 280
Cdd:COG1196 155 EERRAIIEEAAgiskykerkeEAERKleaTEENLERLEDILgelerqleplerqaEKAERyrelkeelkeleaelllLKL 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 281 AGATPYITAAEEKLHSMIVDLDSVVKKVQAAQSEAKVVSQYHELVVQARDDFRKELDSITpditpgwkgMSISDLAGTLs 360
Cdd:COG1196 235 RELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELL---------AELARLEQDI- 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 361 tDDLNALIAHAHRRIDQLNRELAQQKATEKQH--------IELALERQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKVE 432
Cdd:COG1196 305 -ARLEERRRELEERLEELEEELAELEEELEELeeeleeleEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEE 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 433 EVRDAME------------NEMRTQLRRQAAAHTDHLRDVLKVQEQELKFEFEQDLSEKLSEQELEFHRRSQEQMDNFTL 500
Cdd:COG1196 384 LAEELLEalraaaelaaqlEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLE 463
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1958769478 501 DINTAYARLRGIEQAVQshAVAEEEARKAHQLWLSVEALK 540
Cdd:COG1196 464 LLAELLEEAALLEAALA--ELLEELAEAAARLLLLLEAEA 501
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
180-483 |
2.16e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 47.91 E-value: 2.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 180 TAALAKSLEDALNQTATVTRQTITAQNAAVQAVKAHSSTLKTAMdnseiagekkSAQWRTVEGALKERRKAVDEAADAL- 258
Cdd:pfam12128 673 LAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEK----------QAYWQVVEGALDAQLALLKAAIAARr 742
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 259 LKAKEELEKMKTiiedAKKREIAGATPyitaAEEKLHSMIVDLDSVVKKV-QAAQSEAKVVSQ---YHELVVQARDDFRK 334
Cdd:pfam12128 743 SGAKAELKALET----WYKRDLASLGV----DPDVIAKLKREIRTLERKIeRIAVRRQEVLRYfdwYQETWLQRRPRLAT 814
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 335 ELDSITpditpgwkgMSISDLagtlsTDDLNALIAHAHRRIDQLNRELaqqKATEKQHIELALERQKLeekRAFDSAVAK 414
Cdd:pfam12128 815 QLSNIE---------RAISEL-----QQQLARLIADTKLRRAKLEMER---KASEKQQVRLSENLRGL---RCEMSKLAT 874
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958769478 415 ALEHHRSE----IQAEQDRKVEEVRDAMENEMrtqlrRQAAAHTDHLRDVLKVQEQELKFEFEQDLSEKLSEQ 483
Cdd:pfam12128 875 LKEDANSEqaqgSIGERLAQLEDLKLKRDYLS-----ESVKKYVEHFKNVIADHSGSGLAETWESLREEDHYQ 942
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
185-532 |
5.99e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 46.67 E-value: 5.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 185 KSLEDALNQTATVTRQTITAQNAAVQAVKAHSSTLKTAMDNSEIAGEKKSAQWRTVEGALKERRKAVDEAADALLKAKE- 263
Cdd:PTZ00121 1364 EKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEa 1443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 264 -ELEKMKTIIEDAKKREIAGATpyitaAEEKlhsmivdldsvvKKVQAAQSEAKVVSQYHELVVQArDDFRKELDSITPD 342
Cdd:PTZ00121 1444 kKADEAKKKAEEAKKAEEAKKK-----AEEA------------KKADEAKKKAEEAKKADEAKKKA-EEAKKKADEAKKA 1505
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 343 ITPGWKGMSISDLAGTLSTDDLNAliAHAHRRIDQLNRELAQQKATEKQHIElalERQKLEEKRAFDSAVAKALEHHRSE 422
Cdd:PTZ00121 1506 AEAKKKADEAKKAEEAKKADEAKK--AEEAKKADEAKKAEEKKKADELKKAE---ELKKAEEKKKAEEAKKAEEDKNMAL 1580
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 423 IQAEQDRKVEEVRDAMENEMRTQLRRQAAAHTDHLRDVLKVQEQELKFEFEQDLSEKLSEQELEFHRRSQEqmdnftLDI 502
Cdd:PTZ00121 1581 RKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEE------LKK 1654
|
330 340 350
....*....|....*....|....*....|
gi 1958769478 503 NTAYARLRGIEQAVQshavAEEEARKAHQL 532
Cdd:PTZ00121 1655 AEEENKIKAAEEAKK----AEEDKKKAEEA 1680
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
243-508 |
8.32e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.06 E-value: 8.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 243 ALKERRKAVDEAADALLKAKEELEKMKTIIEDAKKREIAgatpyitaaeeklHSMIVDLDSVVKKVQAAQSEakvvsqyh 322
Cdd:COG4913 611 KLAALEAELAELEEELAEAEERLEALEAELDALQERREA-------------LQRLAEYSWDEIDVASAERE-------- 669
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 323 elvVQARDDFRKELDSitpditpgwkgmSISDLAGtlstddLNALIAHAHRRIDQLNRELA----QQKATEKQHIELALE 398
Cdd:COG4913 670 ---IAELEAELERLDA------------SSDDLAA------LEEQLEELEAELEELEEELDelkgEIGRLEKELEQAEEE 728
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 399 RQKLEEkrAFDSAVAKALEHHRSEI-----QAEQDRKVEEVRDAMENEmRTQLRRQAAAHTDHLRDVLkvqeQELKFEFE 473
Cdd:COG4913 729 LDELQD--RLEAAEDLARLELRALLeerfaAALGDAVERELRENLEER-IDALRARLNRAEEELERAM----RAFNREWP 801
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1958769478 474 QDLSE----------------KLSEQEL-----EFHRRSQEQMDNFTLDINTAYAR 508
Cdd:COG4913 802 AETADldadleslpeylalldRLEEDGLpeyeeRFKELLNENSIEFVADLLSKLRR 857
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
371-532 |
2.23e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.75 E-value: 2.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 371 AHRRIDQLNRELAQQKATEKQHIElalERQKLEEKRAFDSAvAKALEHHRSEI--------QAEQDRKVEEVRDAMENEM 442
Cdd:PTZ00121 1120 AKKKAEDARKAEEARKAEDARKAE---EARKAEDAKRVEIA-RKAEDARKAEEarkaedakKAEAARKAEEVRKAEELRK 1195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 443 RTQLRR-QAAAHTDHLRDVLKVQEQELKFEFEQDLSEKLSEQELEFHRRSQEQMDNFTLdinTAYARLRGIEQAVQSHAV 521
Cdd:PTZ00121 1196 AEDARKaEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEI---RKFEEARMAHFARRQAAI 1272
|
170
....*....|.
gi 1958769478 522 AEEEARKAHQL 532
Cdd:PTZ00121 1273 KAEEARKADEL 1283
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
254-491 |
3.02e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 3.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 254 AADALLKAKEELEKMKTIIEdAKKREIAGATPYITAAEEKLHSMIVDLDSVVKKVQAAQSEAKVVSQYHELVVQARDDFR 333
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIA-ELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 334 KELDSITPDITP----GWKGMSISDLAGTLSTDDLNALIAHAhRRIDQLNRELAQQ-KATEKQHIELALERQKLEEKRAF 408
Cdd:COG4942 97 AELEAQKEELAEllraLYRLGRQPPLALLLSPEDFLDAVRRL-QYLKYLAPARREQaEELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 409 DSAVAKALEHHRSEIQAEQDRKveevrdameNEMRTQLRRQAAAHTDHLRDvLKVQEQELkfefeQDLSEKLSEQELEFH 488
Cdd:COG4942 176 LEALLAELEEERAALEALKAER---------QKLLARLEKELAELAAELAE-LQQEAEEL-----EALIARLEAEAAAAA 240
|
...
gi 1958769478 489 RRS 491
Cdd:COG4942 241 ERT 243
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
204-549 |
4.95e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.59 E-value: 4.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 204 AQNAAVQAVKAHSSTLKTAMDNSEIAGEKKSAQWRTVEGALKERRKAVDEAADALLKAKEELEKMKTI---IEDAKKREI 280
Cdd:PTZ00121 1089 ADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIarkAEDARKAEE 1168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 281 AGATPYITAAEEKLHSMIVDLDSVVKKVQAAQsEAKVVSQYHElvVQARDDFRKELDSitpditpgwkgmsisdlagtls 360
Cdd:PTZ00121 1169 ARKAEDAKKAEAARKAEEVRKAEELRKAEDAR-KAEAARKAEE--ERKAEEARKAEDA---------------------- 1223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 361 tddlnaliahahRRIDQLNR-ELAQQKATEKQHIElalERQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKVEEVRDAME 439
Cdd:PTZ00121 1224 ------------KKAEAVKKaEEAKKDAEEAKKAE---EERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEE 1288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 440 NEMRTQLRRQaaahtdhlRDVLKVQEQELKFEfEQDLSEKLSEQELEFHRRSQEQMDNFTLDINTAYARlRGIEQAVQSH 519
Cdd:PTZ00121 1289 KKKADEAKKA--------EEKKKADEAKKKAE-EAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAA-KAEAEAAADE 1358
|
330 340 350
....*....|....*....|....*....|
gi 1958769478 520 AVAEEEARKAHQLWLSVEALKYSMKTSSAE 549
Cdd:PTZ00121 1359 AEAAEEKAEAAEKKKEEAKKKADAAKKKAE 1388
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
275-531 |
6.15e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 43.51 E-value: 6.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 275 AKKREIAGATPYITAAEEKLHsmivdldsvvkkvqAAQSEAKVVSQYHELVVQARDDFRKELDSITPDItpgwkgmsisd 354
Cdd:TIGR02168 674 ERRREIEELEEKIEELEEKIA--------------ELEKALAELRKELEELEEELEQLRKELEELSRQI----------- 728
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 355 lagtlstDDLNALIAHAHRRIDQLNRELAQQKATEKqhiELALERQKLEEKRAFDSAVAKALEHHRseiqAEQDRKVEEV 434
Cdd:TIGR02168 729 -------SALRKDLARLEAEVEQLEERIAQLSKELT---ELEAEIEELEERLEEAEEELAEAEAEI----EELEAQIEQL 794
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 435 RDAMENEmRTQLRRQAAAHTDHLRDVLKVQEQELKFEFEQDLSEKLSEQELEFHRRSQEQMDNFTLDINTAYARLRGIEQ 514
Cdd:TIGR02168 795 KEELKAL-REALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELES 873
|
250 260
....*....|....*....|
gi 1958769478 515 AVQSHAV---AEEEARKAHQ 531
Cdd:TIGR02168 874 ELEALLNeraSLEEALALLR 893
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
376-531 |
1.80e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 41.88 E-value: 1.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 376 DQLNRELAQQKATEKQHIELALERQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKVEEVRDAMENEMRTQLRRQAAAH-- 453
Cdd:TIGR00618 256 LKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHvk 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 454 -------TDHLRDVLKVQEQELKFEFEQDLS---EKLSEQELEFHRRSQEQMDNFTLDINTAYARLRGIEQAVQSHAVAE 523
Cdd:TIGR00618 336 qqssieeQRRLLQTLHSQEIHIRDAHEVATSireISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTR 415
|
....*...
gi 1958769478 524 EEARKAHQ 531
Cdd:TIGR00618 416 TSAFRDLQ 423
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
290-512 |
2.09e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 2.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 290 AEEKLHSMIVDLDSVVKKVQAAQSEAKVVSQYHELVVQARDDFRKELDSITPDItpgwkgmsisDLAGtlstddlnalia 369
Cdd:COG4913 608 NRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEI----------DVAS------------ 665
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 370 hAHRRIDQLNRELAQQKATEKQHIELALERQKLEEKRafdsavaKALEHHRSEIQAEQDRKVEEvrdamenemRTQLRRQ 449
Cdd:COG4913 666 -AEREIAELEAELERLDASSDDLAALEEQLEELEAEL-------EELEEELDELKGEIGRLEKE---------LEQAEEE 728
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958769478 450 AAAHTDHLRDVLKVQEQELKFEFEQDLSE-KLSEQELEFHRRSQEQMDNFTLDINTAYARLRGI 512
Cdd:COG4913 729 LDELQDRLEAAEDLARLELRALLEERFAAaLGDAVERELRENLEERIDALRARLNRAEEELERA 792
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
362-530 |
2.89e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 41.21 E-value: 2.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 362 DDLNALIAHAHRRIDQLNRELAQQKAtekqhiELALERQKLEEKRAFDSAVAKALEHHRSEIQ------AEQDRKVEEVR 435
Cdd:TIGR02169 705 DELSQELSDASRKIGEIEKEIEQLEQ------EEEKLKERLEELEEDLSSLEQEIENVKSELKeleariEELEEDLHKLE 778
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 436 DAMEN-----------EMRTQLRRQAAAHTDhLRDVLKVQEQEL-KFEFEQDLSEKLSEQELEFHRRSQEQMDNFTLDIN 503
Cdd:TIGR02169 779 EALNDlearlshsripEIQAELSKLEEEVSR-IEARLREIEQKLnRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIE 857
|
170 180
....*....|....*....|....*..
gi 1958769478 504 TAYARLRGIEQAVQSHAVAEEEARKAH 530
Cdd:TIGR02169 858 NLNGKKEELEEELEELEAALRDLESRL 884
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
362-533 |
3.01e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.91 E-value: 3.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 362 DDLNALIAHAHRRIDQLNRELAQQKATEKQHIELALERQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKVEEVR-DAMEN 440
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQELEALEAELAELPERlEELEE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 441 EMRTqlRRQAAAHTDHLRDVLKVQEQELKFEFEQDLSEKLSEQE--LEFHRRSQEQMDNFTLDINTAYARLRGIEQAVQS 518
Cdd:COG4717 154 RLEE--LRELEEELEELEAELAELQEELEELLEQLSLATEEELQdlAEELEELQQRLAELEEELEEAQEELEELEEELEQ 231
|
170
....*....|....*
gi 1958769478 519 HAVAEEEARKAHQLW 533
Cdd:COG4717 232 LENELEAAALEERLK 246
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
380-553 |
3.01e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 40.88 E-value: 3.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 380 RELAQQKATEKQHIELA-LERQKLEEKRAFDSAVAKALEHHRSEIQAEQDRKVEEVRDAMENEMRTqlRRQAAAHTDHLR 458
Cdd:pfam17380 438 RRLEEERAREMERVRLEeQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEE--RKQAMIEEERKR 515
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 459 DVLK---------VQEQELKFEFEQdlsEKLSEQELEFHRRSQEQMDNFTLDINTAYARLRgiEQAVQSHAVAEEEARKA 529
Cdd:pfam17380 516 KLLEkemeerqkaIYEEERRREAEE---ERRKQQEMEERRRIQEQMRKATEERSRLEAMER--EREMMRQIVESEKARAE 590
|
170 180
....*....|....*....|....*.
gi 1958769478 530 HQLWLSVEALK--YSMKTSSAEMPTI 553
Cdd:pfam17380 591 YEATTPITTIKpiYRPRISEYQPPDV 616
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
181-486 |
5.31e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 40.31 E-value: 5.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 181 AALAKSLEDALNQTATVTRQTITAQNAAVQAVKAHSSTLKTAMDNSEIAG----EKKSAQWRTVEGAL-------KERRK 249
Cdd:COG1196 459 EALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEgvkaALLLAGLRGLAGAVavligveAAYEA 538
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 250 AVDEAADALLKAK--EELEKMKTIIEDAKKREIAGAT--PYITAAEEKLHSMIVDLDSVVKKVQAAQSEAkvvsQYHELV 325
Cdd:COG1196 539 ALEAALAAALQNIvvEDDEVAAAAIEYLKAAKAGRATflPLDKIRARAALAAALARGAIGAAVDLVASDL----READAR 614
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 326 VQARDDFRKELDSITPDITPGWKGMSISDLAGTLSTDDLNALIAHAHRRIDQLNRELAQQKATEKQhielaLERQKLEEK 405
Cdd:COG1196 615 YYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAE-----LEELAERLA 689
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 406 RAFDSAVAKALEHHRSEIQAEQDRKVEEVRDAMENEMRTQLRRQAAAHTDHLRDVLKVQEQELKFEFEQDLSEKLSEQEL 485
Cdd:COG1196 690 EEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELEREL 769
|
.
gi 1958769478 486 E 486
Cdd:COG1196 770 E 770
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
362-531 |
5.39e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.28 E-value: 5.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 362 DDLNAL---IAHAHRRIDQL-----NRELAQQKATEKQHIELALERQKLEEKRAFDSAVAKALEHHRSEIQAEQDRK--- 430
Cdd:COG4913 235 DDLERAheaLEDAREQIELLepireLAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELerl 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 431 ------VEEVRDAMENEMR-------TQLRRQAAAHTDHLRDVLKVQEQelkfeFEQ-----DLSEKLSEQEL-EFHRRS 491
Cdd:COG4913 315 earldaLREELDELEAQIRgnggdrlEQLEREIERLERELEERERRRAR-----LEAllaalGLPLPASAEEFaALRAEA 389
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1958769478 492 QEQMDNFTldintayARLRGIEQAVQSHAVAEEEARKAHQ 531
Cdd:COG4913 390 AALLEALE-------EELEALEEALAEAEAALRDLRRELR 422
|
|
| HMMR_N |
pfam15905 |
Hyaluronan mediated motility receptor N-terminal; HMMR_N is the N-terminal region of ... |
370-493 |
7.08e-03 |
|
Hyaluronan mediated motility receptor N-terminal; HMMR_N is the N-terminal region of eukaryotic hyaluronan-mediated motility receptor proteins. The protein is functionally associated with BRCA1 and thus predicted to be a common, low-penetrance breast cancer candidate.
Pssm-ID: 464932 [Multi-domain] Cd Length: 329 Bit Score: 39.41 E-value: 7.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 370 HAHRRIDQLNRELaqqKATEKQHIELALERQKLEEKRAFDSAVAKALEHHRSEIQaeqdrKVEEVRDAMENEMRTqLRRQ 449
Cdd:pfam15905 195 HSKGKVAQLEEKL---VSTEKEKIEEKSETEKLLEYITELSCVSEQVEKYKLDIA-----QLEELLKEKNDEIES-LKQS 265
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1958769478 450 AAAHTDHLRDVLKVQEQELKfEFEQDLSEKLSEQELEFHRRSQE 493
Cdd:pfam15905 266 LEEKEQELSKQIKDLNEKCK-LLESEKEELLREYEEKEQTLNAE 308
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
248-474 |
9.28e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 39.51 E-value: 9.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 248 RKAVDEAADALLKAKEELEKMKTIIEDAK-KREIAGATPYITAAEEKLHSMIVDLDSVVKKVQAAQSEAKVvsqyhELVV 326
Cdd:COG4913 220 EPDTFEAADALVEHFDDLERAHEALEDAReQIELLEPIRELAERYAAARERLAELEYLRAALRLWFAQRRL-----ELLE 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958769478 327 QARDDFRKELDSITPDItpgwkgmsisdlagtlstDDLNALIAHAHRRIDQLNRELAQQKATEKQHIE-----LALERQK 401
Cdd:COG4913 295 AELEELRAELARLEAEL------------------ERLEARLDALREELDELEAQIRGNGGDRLEQLEreierLERELEE 356
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958769478 402 LEEKRAFDSAVAKALEHHRSEIQAEQDRKVEEVRDAME--NEMRTQLRRQAAAHTDHLRDvLKVQEQELKFEFEQ 474
Cdd:COG4913 357 RERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEalEEELEALEEALAEAEAALRD-LRRELRELEAEIAS 430
|
|
| |
