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Conserved domains on  [gi|164420943|ref|YP_001648456|]
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ATP synthase F0 subunit 6 (mitochondrion) [Amphimedon compressa]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009612)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 1-241 3.27e-130

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 177228  Cd Length: 244  Bit Score: 367.41  E-value: 3.27e-130
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943   1 MLAAYFDQFNVVRLITIQAFMGDWLVTFTNTSMMMVLAVTIFWLLLKGDKLIPNRWQSIMELIHLNIRTVVDDNLGKPGQ 80
Cdd:MTH00175   1 MLAAYFDQFNIIRLITIQAFLGDWLVTFTNSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  81 KYFPFVLSLFLFIALLNVLGLFPYVFTPTAQIVVTFGLSLSIIIGVTILGLTAFKSNFLSILVPNGAPLVLAPFLVLIET 160
Cdd:MTH00175  81 KYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIET 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943 161 IGYISRAVSLGMRLAANLTAGHLLFAIVSGFAFNMLSG---ALSVFPMLIMMFITILEMAVAIIQAYVFCLLTAIYLGDT 237
Cdd:MTH00175 161 LSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNgliILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDT 240


                 ....
gi 164420943 238 IALH 241
Cdd:MTH00175 241 IALH 244
 
Name Accession Description Interval E-value
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 1-241 3.27e-130

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 367.41  E-value: 3.27e-130
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943   1 MLAAYFDQFNVVRLITIQAFMGDWLVTFTNTSMMMVLAVTIFWLLLKGDKLIPNRWQSIMELIHLNIRTVVDDNLGKPGQ 80
Cdd:MTH00175   1 MLAAYFDQFNIIRLITIQAFLGDWLVTFTNSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  81 KYFPFVLSLFLFIALLNVLGLFPYVFTPTAQIVVTFGLSLSIIIGVTILGLTAFKSNFLSILVPNGAPLVLAPFLVLIET 160
Cdd:MTH00175  81 KYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIET 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943 161 IGYISRAVSLGMRLAANLTAGHLLFAIVSGFAFNMLSG---ALSVFPMLIMMFITILEMAVAIIQAYVFCLLTAIYLGDT 237
Cdd:MTH00175 161 LSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNgliILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDT 240


                 ....
gi 164420943 238 IALH 241
Cdd:MTH00175 241 IALH 244
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 24-238 6.98e-56

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 178.17  E-value: 6.98e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943   24 WLVTFTNTSMMMVLAVTIFWLLLK-GDKLIPNRWQSIMELIHLNIRTVVDDNLGKPGQKYFPFVLSLFLFIALLNVLGLF 102
Cdd:TIGR01131  11 TLFSLTLLSLILLLSLLIFLISSSlSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGLI 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  103 PYVFTPTAQIVVTFGLSLSIIIGVTILGLTAFKSNFLSILVPNGAPLVLAPFLVLIETIGYISRAVSLGMRLAANLTAGH 182
Cdd:TIGR01131  91 PYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGH 170

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 164420943  183 LLFAIVSGFAFNMLSGALSVFPMLIMMFITILEMAVAIIQAYVFCLLTAIYLGDTI 238
Cdd:TIGR01131 171 LLLTLLSGLLFSLMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 79-235 1.23e-44

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 146.78  E-value: 1.23e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  79 GQKYFPFVLSLFLFIALLNVLGLFPYVFTPTAQIVVTFGLSLSIIIGVTILGLTAFKSNFLSILVPNGAPLVLAPFLVLI 158
Cdd:cd00310    1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 164420943 159 ETIGYISRAVSLGMRLAANLTAGHLLFAIVSGFAFNMLSgALSVFPMLIMMFITILEMAVAIIQAYVFCLLTAIYLG 235
Cdd:cd00310   81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLS-SVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 34-239 8.71e-44

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 146.76  E-value: 8.71e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  34 MMVLAVTIFWLLLKGDKLIPNRWQSIMELIHLNIRTVVDDNLGKPGQKYFPFVLSLFLFIALLNVLGLFPYVFTPTAQIV 113
Cdd:COG0356    9 AMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADIN 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943 114 VTFGLSLSIIIGVTILGLTA--FKSNFLSILVPNGAPlvLAPFLVLIETIGYISRAVSLGMRLAANLTAGHLLFAIVSGF 191
Cdd:COG0356   89 VTLALALIVFVLVHYYGIKKkgLGGYLKHLFFPPFPW--LAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGL 166

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 164420943 192 AFNMLSGALSVFpmlIMMFITILEMAVAIIQAYVFCLLTAIYLGDTIA 239
Cdd:COG0356  167 APFLLLGVLSLL---LPVAWTAFELLVGFLQAYIFTMLTAVYISLAVE 211
ATP-synt_A pfam00119
ATP synthase A chain;
33-235 1.07e-42

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 143.78  E-value: 1.07e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943   33 MMMVLAVTIFWLLL----KGDKLIPNRWQSIMELIHLNIRTVVDDNLG-KPGQKYFPFVLSLFLFIALLNVLGLF---PY 104
Cdd:pfam00119   3 MSLIVALILLLFLLlatrKTKKLVPGRLQNFVEMLVEFVDNIVKDNIGkKKGRKFFPLLLTLFFFILVSNLLGLIpksPG 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  105 VFTPTAQIVVTFGLSLSIIIGVTILGLTA--FKSNFLSILVPnGAPLVLAPFLVLIETIGYISRAVSLGMRLAANLTAGH 182
Cdd:pfam00119  83 GFTVTADINVTLALALIVFLLVHYYGIKKhgLGGYFKKLFVP-PVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGH 161

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 164420943  183 LLFAIVSGFAFNMLS--GALSVFPMLIMMFITILEMAVAIIQAYVFCLLTAIYLG 235
Cdd:pfam00119 162 LLLLLLAGLIFALLSagFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
 
Name Accession Description Interval E-value
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 1-241 3.27e-130

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 367.41  E-value: 3.27e-130
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943   1 MLAAYFDQFNVVRLITIQAFMGDWLVTFTNTSMMMVLAVTIFWLLLKGDKLIPNRWQSIMELIHLNIRTVVDDNLGKPGQ 80
Cdd:MTH00175   1 MLAAYFDQFNIIRLITIQAFLGDWLVTFTNSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSGQ 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  81 KYFPFVLSLFLFIALLNVLGLFPYVFTPTAQIVVTFGLSLSIIIGVTILGLTAFKSNFLSILVPNGAPLVLAPFLVLIET 160
Cdd:MTH00175  81 KYFPFILSLFLFIAILNILGLFPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIET 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943 161 IGYISRAVSLGMRLAANLTAGHLLFAIVSGFAFNMLSG---ALSVFPMLIMMFITILEMAVAIIQAYVFCLLTAIYLGDT 237
Cdd:MTH00175 161 LSYLIRAISLGVRLAANISAGHLLFAILSGFAFNMLSNgliILSLFPMLIMIFITLLEMAVAVIQAYVFCLLTTIYLGDT 240


                 ....
gi 164420943 238 IALH 241
Cdd:MTH00175 241 IALH 244
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 1-241 1.98e-95

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 278.85  E-value: 1.98e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943   1 MLAAYFDQFNVVrlitiqafmgdWLVTFTNTSMMMVLAVTIFWLLLKGDKLIPNRWQSIMELIHLNIRTVVDDNLGKPGQ 80
Cdd:MTH00172   1 MSSSYFDQFNIV-----------WLIGLTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGL 69

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  81 KYFPFVLSLFLFIALLNVLGLFPYVFTPTAQIVVTFGLSLSIIIGVTILGLTAFKSNFLSILVPNGAPLVLAPFLVLIET 160
Cdd:MTH00172  70 KYFPFIISLFFFIVFLNLLGLFPYVFTPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIET 149

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943 161 IGYISRAVSLGMRLAANLTAGHLLFAIVSGFAFNML--SGALSVFPMLIMMFITILEMAVAIIQAYVFCLLTAIYLGDTI 238
Cdd:MTH00172 150 VSYISRAISLGVRLAANLSAGHLLFAILAGFGFNMLcaSGFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIYLADTI 229


                 ...
gi 164420943 239 ALH 241
Cdd:MTH00172 230 VLH 232
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 1-241 8.46e-57

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 181.29  E-value: 8.46e-57
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943   1 MLAAYFDQFNVVRLITIQAFMGDWLVT-----FTNTSMMMVLAVTIFWLLLK---GDKLIPNRWQSIMELIHLNIRTVVD 72
Cdd:MTH00174   1 MVAAYFDQFNIIPIFSIWVYFLSFWINgeffcFTNTFFMMSFAVFLFYTIGAkgnNNTLVPNRILVGLELIYSHFYTVLK 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  73 DNLGKPGQKYFPFVLSLFLFIALLNVLGLFPYVFTPTAQIVVTFGLSLSIIIGVTILGLTAFKSNFLSILVPNGAPLVLA 152
Cdd:MTH00174  81 DNLGNKGGNYLAFVLSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLAGLITFRFNFFSILMPQGAPLALA 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943 153 PFLVLIETIGYISRAVSLGMRLAANLTAGHLLFAIVSGFAFNMLSGAL---SVFPMLIMMFITILEMAVAIIQAYVFCLL 229
Cdd:MTH00174 161 PLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMINTGIligSFVPFAILIFVTILEMAVAIIQAYVFTLL 240

                        250
                 ....*....|..
gi 164420943 230 TAIYLGDTIALH 241
Cdd:MTH00174 241 TIVYLRDTVELH 252
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 24-238 6.98e-56

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 178.17  E-value: 6.98e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943   24 WLVTFTNTSMMMVLAVTIFWLLLK-GDKLIPNRWQSIMELIHLNIRTVVDDNLGKPGQKYFPFVLSLFLFIALLNVLGLF 102
Cdd:TIGR01131  11 TLFSLTLLSLILLLSLLIFLISSSlSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGKFFPLIFTLFLFILISNLLGLI 90

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  103 PYVFTPTAQIVVTFGLSLSIIIGVTILGLTAFKSNFLSILVPNGAPLVLAPFLVLIETIGYISRAVSLGMRLAANLTAGH 182
Cdd:TIGR01131  91 PYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLSVRLFANISAGH 170

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 164420943  183 LLFAIVSGFAFNMLSGALSVFPMLIMMFITILEMAVAIIQAYVFCLLTAIYLGDTI 238
Cdd:TIGR01131 171 LLLTLLSGLLFSLMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 79-235 1.23e-44

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 146.78  E-value: 1.23e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  79 GQKYFPFVLSLFLFIALLNVLGLFPYVFTPTAQIVVTFGLSLSIIIGVTILGLTAFKSNFLSILVPNGAPLVLAPFLVLI 158
Cdd:cd00310    1 GKKYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPI 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 164420943 159 ETIGYISRAVSLGMRLAANLTAGHLLFAIVSGFAFNMLSgALSVFPMLIMMFITILEMAVAIIQAYVFCLLTAIYLG 235
Cdd:cd00310   81 ELISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLS-SVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVYIS 156
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 34-239 8.71e-44

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 146.76  E-value: 8.71e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  34 MMVLAVTIFWLLLKGDKLIPNRWQSIMELIHLNIRTVVDDNLGKPGQKYFPFVLSLFLFIALLNVLGLFPYVFTPTAQIV 113
Cdd:COG0356    9 AMLLLLLLFLLATRKLKLVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLLTLFLFILVSNLLGLIPGLFPPTADIN 88

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943 114 VTFGLSLSIIIGVTILGLTA--FKSNFLSILVPNGAPlvLAPFLVLIETIGYISRAVSLGMRLAANLTAGHLLFAIVSGF 191
Cdd:COG0356   89 VTLALALIVFVLVHYYGIKKkgLGGYLKHLFFPPFPW--LAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGL 166

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 164420943 192 AFNMLSGALSVFpmlIMMFITILEMAVAIIQAYVFCLLTAIYLGDTIA 239
Cdd:COG0356  167 APFLLLGVLSLL---LPVAWTAFELLVGFLQAYIFTMLTAVYISLAVE 211
ATP-synt_A pfam00119
ATP synthase A chain;
33-235 1.07e-42

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 143.78  E-value: 1.07e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943   33 MMMVLAVTIFWLLL----KGDKLIPNRWQSIMELIHLNIRTVVDDNLG-KPGQKYFPFVLSLFLFIALLNVLGLF---PY 104
Cdd:pfam00119   3 MSLIVALILLLFLLlatrKTKKLVPGRLQNFVEMLVEFVDNIVKDNIGkKKGRKFFPLLLTLFFFILVSNLLGLIpksPG 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  105 VFTPTAQIVVTFGLSLSIIIGVTILGLTA--FKSNFLSILVPnGAPLVLAPFLVLIETIGYISRAVSLGMRLAANLTAGH 182
Cdd:pfam00119  83 GFTVTADINVTLALALIVFLLVHYYGIKKhgLGGYFKKLFVP-PVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGH 161

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 164420943  183 LLFAIVSGFAFNMLS--GALSVFPMLIMMFITILEMAVAIIQAYVFCLLTAIYLG 235
Cdd:pfam00119 162 LLLLLLAGLIFALLSagFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 24-237 1.63e-41

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 141.07  E-value: 1.63e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  24 WLVTFtntsMMMVLAVTIFWLllkgdklIPNRWQSIMELIHLNIRTVVDDNLGKPGQKYFPFVLSLFLFIALLNVLGLFP 103
Cdd:MTH00157  21 WLSTF----LGLLFIPSSFWL-------IPSRYNILWNKILKTLHKEFKTLLGPKNKGSTLIFISLFSFILFNNFLGLFP 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943 104 YVFTPTAQIVVTFGLSLSIIIGVTILGLTAFKSNFLSILVPNGAPLVLAPFLVLIETIGYISRAVSLGMRLAANLTAGHL 183
Cdd:MTH00157  90 YIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAVRLAANMIAGHL 169

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 164420943 184 LFAIVSGFAFNMLSGALSVFpMLIMMFITILEMAVAIIQAYVFCLLTAIYLGDT 237
Cdd:MTH00157 170 LLTLLGNTGPSLSSMILSIL-ILIQILLLILESAVAIIQSYVFSVLSTLYSSEV 222
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 21-241 1.17e-38

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 133.77  E-value: 1.17e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  21 MGDWLVTFTNTSMMMVLAVTIFWLLL----KGDKLIPNRWQSIMELIHLNIRTVVDDNLGKPGQKYFPFVLSLFLFIALL 96
Cdd:PRK05815   7 IGFGGFNFDSLLLSVLLGVLILLLFAlvatRKLSGVPGGLQNFVEMIVEFVRGQVKDNIGGKGKKFAPLAFTLFLFILLM 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  97 NVLGLFP-YVFTPTAQIVVTFGLSLSIIIGVTILGLTAFK-SNFLSILVPNGAPLVLApflvlIETIGYISRAVSLGMRL 174
Cdd:PRK05815  87 NLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGIKKKGlGGYLKEFYLQPHPLLLP-----IEIISEFSRPISLSLRL 161

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 164420943 175 AANLTAGHLLFAIVSGFAFNMLsgALSVFPMLIMMFITILEMAVAIIQAYVFCLLTAIYLGDTIALH 241
Cdd:PRK05815 162 FGNMLAGELILALIALLGGAGL--LLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYISMAVEEE 226
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-234 2.14e-37

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 130.71  E-value: 2.14e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943   1 MLAAYFDQFNVVRLITIQafmgdwlvtftntSMMMVLAVTIFWLLLKGDKLIPNRWQSIMELIHLNIRTVVDDNLGKPGQ 80
Cdd:MTH00120   1 MNLNFFDQFSSPELLGIP-------------LILLAMLIPALLIPSPKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGH 67

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  81 KYFPFVLSLFLFIALLNVLGLFPYVFTPTAQIVVTFGLSLSIIIGVTILGLTAFKSNFLSILVPNGAPLVLAPFLVLIET 160
Cdd:MTH00120  68 KWALILTSLMLLLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIET 147

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 164420943 161 IGYISRAVSLGMRLAANLTAGHLLFAIVSGFAFNMLSG--ALSVFPMLIMMFITILEMAVAIIQAYVFCLLTAIYL 234
Cdd:MTH00120 148 ISLLIRPLALGVRLTANLTAGHLLIQLISTATLNLLPTmpTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 35-234 1.25e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 123.52  E-value: 1.25e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  35 MVLAVTIFWLLLKGD--KLIPNRWQSIMELIHLNIRTVVDDNLGKPGQKYFPFVLSLFLFIALLNVLGLFPYVFTPTAQI 112
Cdd:MTH00179  20 LALALLLPWLLFPSLtnRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWAVLFLSLMLFLLTLNLLGLLPYTFTPTTQL 99

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943 113 VVTFGLSLSIIIGVTILGLTAFKSNFLSILVPNGAPLVLAPFLVLIETIGYISRAVSLGMRLAANLTAGHLLFAIVSGFA 192
Cdd:MTH00179 100 SLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALGVRLTANITAGHLLMHLISSAV 179

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 164420943 193 FNML--SGALSVFPMLIMMFITILEMAVAIIQAYVFCLLTAIYL 234
Cdd:MTH00179 180 FVLMnfMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 21-236 3.65e-33

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 119.67  E-value: 3.65e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  21 MGDWLVTFTNTSMMMVLAVTIF------WLLLKGDKLIPNRWQSIME-LIHLNIRTVVDDNLGKpGQKYFPFVLSLFLFI 93
Cdd:MTH00101   1 MNENLFASFITPTILGLPIVTLiimfpsLLFPTPNRLINNRLISIQQwLIQLTSKQMMTIHNTK-GQTWSLMLMSLILFI 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  94 ALLNVLGLFPYVFTPTAQIVVTFGLSLSIIIGVTILGLTAFKSNFLSILVPNGAPLVLAPFLVLIETIGYISRAVSLGMR 173
Cdd:MTH00101  80 GSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAVR 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 164420943 174 LAANLTAGHLLFAIVSGFAFNMLSGALSVFPM--LIMMFITILEMAVAIIQAYVFCLLTAIYLGD 236
Cdd:MTH00101 160 LTANITAGHLLIHLIGGATLALMSISTTTALItfIILILLTILEFAVALIQAYVFTLLVSLYLHD 224
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 75-234 5.75e-33

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 119.21  E-value: 5.75e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  75 LGKPGQKYFPFVLSLFLFIALLNVLGLFPYVFTPTAQIVVTFGLSLSIIIGVTILGLTAFKSNFLSILVPNGAPLVLAPF 154
Cdd:MTH00132  62 LNVGGHKWALLLTSLMLFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPV 141

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943 155 LVLIETIGYISRAVSLGMRLAANLTAGHLLFAIVSGFAFNMLS--GALSVFPMLIMMFITILEMAVAIIQAYVFCLLTAI 232
Cdd:MTH00132 142 LIIIETISLFIRPLALGVRLTANLTAGHLLIQLIATAAFVLLPlmPTVAILTATLLFLLTLLEVAVAMIQAYVFVLLLSL 221


                 ..
gi 164420943 233 YL 234
Cdd:MTH00132 222 YL 223
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 20-234 9.19e-32

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 116.23  E-value: 9.19e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  20 FMGDWLVTFTNTSMMMVLAVTIFWLLLKgDKLIPNRWQSIMELIHLNIRTVVDDNLGKPGQKYFPFVLSLFLFIALLNVL 99
Cdd:MTH00035  11 FSPDTILFIPLTLLSSVIALSWLFFINP-TNWLPSRSQSIWLTFRQEILKLIFQNTNPNTAPWAGLLTTVFILILSINVL 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943 100 GLFPYVFTPTAQIVVTFGLSLSIIIGVTILGltaFKSNF---LSILVPNGAPLVLAPFLVLIETIGYISRAVSLGMRLAA 176
Cdd:MTH00035  90 GLFPYAFTSTSHISLTYSLGIPLWMSVNILG---FYLAFnsrLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALGLRLAA 166

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 164420943 177 NLTAGHLLFAIVSGFAFNMLSGALSVFPMLIMMFIT-ILEMAVAIIQAYVFCLLTAIYL 234
Cdd:MTH00035 167 NLTAGHLLIFLLSTAIWELSNSPLISIITLIIFFLLfILEIGVACIQAYVFTALVHFYL 225
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 34-234 9.27e-32

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 116.22  E-value: 9.27e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  34 MMVLAVTIFWLLLKG--DKLIPNRWQSIMELIHLNIRTVVDDNLGKPGQKYFPFVLSLFLFIALLNVLGLFPYVFTPTAQ 111
Cdd:MTH00073  19 LIMLAMLLPWLLFPTptNKWLNNRLSTLQIWFLQNFTKQLMLPLNTPGHKWALILTSLMVFLITMNLLGLLPYTFTPTTQ 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943 112 IVVTFGLSLSIIIGVTILGLTAFKSNFLSILVPNGAPLVLAPFLVLIETIGYISRAVSLGMRLAANLTAGHLLFAIVSGF 191
Cdd:MTH00073  99 LSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGVRLTANLTAGHLLIQLISTA 178

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 164420943 192 AFNMLS--GALSVFPMLIMMFITILEMAVAIIQAYVFCLLTAIYL 234
Cdd:MTH00073 179 TLVLLPlmPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYL 223
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 85-237 2.68e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 114.96  E-value: 2.68e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  85 FVLSLFLFIALLNVLGLFPYVFTPTAQIVVTFGLSLSIIIGVTILGLTAFKSNFLSILVPNGAPLVLAPFLVLIETIGYI 164
Cdd:MTH00173  74 LLSSLFLFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSIL 153

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 164420943 165 SRAVSLGMRLAANLTAGHLLFAIVSGF--AFNMLSGALSVFP-MLIMMFITILEMAVAIIQAYVFCLLTAIYLGDT 237
Cdd:MTH00173 154 IRPLTLTVRLLANISAGHIVLTLIGNYlsSSLFSSSVVSLLLvLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDEH 229
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 28-236 7.78e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 108.67  E-value: 7.78e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  28 FTNTSMMMVLAvTIFWLLlkgdkliPNRWQSIMELIHLNIRTVVDDNLGKPGQKYFPFVLSLFLFIALLNVLGLFPYVFT 107
Cdd:MTH00005  27 AFNFSIILLLS-SSFWIT-------PNRLSSIMSPPKSTMHTQLSRTFGKHLKGFSSLISALFTMIILMNLSGLLPYVFS 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943 108 PTAQIVVTFGLSLSIIIGVTILGLTAFKSNFLSILVPNGAPLVLAPFLVLIETIGYISRAVSLGMRLAANLTAGHLLFAI 187
Cdd:MTH00005  99 TSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPITLSFRLAANMSAGHIVLSL 178

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 164420943 188 VSGFAFNMLSGALSVFPMLIM--MFITILEMAVAIIQAYVFCLLTAIYLGD 236
Cdd:MTH00005 179 IGIYAASALFSSISSTILLILtqMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 82-236 1.76e-26

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 102.42  E-value: 1.76e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  82 YFPFVLSLFLFIALLNVLGLFPYVFTPTAQIVVTFGLSLSIIIGVTILGLTAFKSNFLSILVPNGAPLVLAPFLVLIETI 161
Cdd:MTH00176  71 SASIIISLFILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELV 150

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 164420943 162 GYISRAVSLGMRLAANLTAGHLLFAIVSGFAFNMLSGALSVFPMLIMM--FITILEMAVAIIQAYVFCLLTAIYLGD 236
Cdd:MTH00176 151 SLLIRPLTLAVRLAANLSAGHLLLGLLGAAMWGLLPVSPLIGFLLLIVqiLYFMFEIAVCMIQAYVFTLLLSLYLDE 227
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 6-241 3.45e-19

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 84.79  E-value: 3.45e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943   6 FDQFNVVRLITIQAFMGDwlVTFTNTSMMMVLAVTIFWLLLKG---------DKLIPNRWQSIMELIHLNIRT-VVDDNL 75
Cdd:PRK13419  86 FEPFGEVHLPKLVVGGFD--ISITKHVVMMWIASAILLVVFLAagrkykkmtKSQAPKGLANAMEALVEFIRLdVAKSNI 163

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  76 GKPGQKYFPFVLSLFLFIALLNVLGLFPYVFTPTAQIVVTFGLSLSIIIgvtILGLTAFKSN----FLSILVpNGAPLVL 151
Cdd:PRK13419 164 GHGYEKFLPYLLTVFFFILVCNLLGLVPYGATATGNINVTLTLAVFTFF---ITQYAAIKAHgikgYLAHLT-GGTHWSL 239

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943 152 APFLVLIETIGYISRAVSLGMRLAANLTAGH-----LLFAIvsgFAFN--MLSGALSVfPMLImmFITILEMAVAIIQAY 224
Cdd:PRK13419 240 WIIMIPIEFIGLFTKPFALTVRLFANMTAGHivilsLIFIS---FILKsyIVAVAVSV-PFAI--FIYLLELFVAFLQAY 313

                        250
                 ....*....|....*..
gi 164420943 225 VFCLLTAIYLGDTIALH 241
Cdd:PRK13419 314 IFTMLSALFIGLATAHE 330
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 32-241 9.07e-17

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 78.01  E-value: 9.07e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  32 SMMMVLAVTIFWLLLKGDKLIP-------NRWQSIME-LIHLNIRTVVDDNLGKPGQKYFPFVLSLFLFIALLNVLGLFP 103
Cdd:PRK13417  99 TMMWIVAFFLFLIFIPAANIIAknplkvqSRFANTVEvFVNFLRKDIVDESMHGHGHSYYHYIFTLFFFILFCNLMGLVP 178

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943 104 YV-----------------------------------FTPTAQIVVTFGLSLSIIIGVTILGLTAFKSNFLSILVPNGAP 148
Cdd:PRK13417 179 SVgeltvvasdygglvalgvmdhtphalptfakvwsgITVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVP 258

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943 149 LVLAPFLVLIETI-GYISRAVSLGMRLAANLTAGHLLFAIVSGFAFNMLSGALSVFPMLIMMFITILEMAVAIIQAYVFC 227
Cdd:PRK13417 259 LLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVIILALMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFV 338

                        250
                 ....*....|....
gi 164420943 228 LLTAIYLGDTIALH 241
Cdd:PRK13417 339 LLTSLFVGLSMHRH 352
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 27-241 5.31e-15

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 71.70  E-value: 5.31e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  27 TFTNTSMMMVLAVTIFWLLLKGDKLIPNRWQSIMELIHLNIRTVVDDNLGKPGQKYFPFVLSLFLFIALLNVLGLFPYVF 106
Cdd:PRK13420  19 SVLTTWGIMIVLVLASWLTTRRLSLDPGRFQVALEGVVSTIEDAIKEVLPRHARLVLPFVGTLWIFILVANLIGLIPGFH 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943 107 TPTAQIVVTFGLSLSIIIGVTILGLTA--FKSNFLSILVPNgaplvlaPFLVLIETIGYISRAVSLGMRLAANLTAGHLL 184
Cdd:PRK13420  99 SPTADLSVTAALALLVFFSVHWFGIRAegLREYLKHYLSPS-------PFLLPFHLISEITRTLALAVRLFGNIMSLELA 171

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 164420943 185 FAIVSgfafnMLSGALSVFPMLIMMFITilemavAIIQAYVFCLLTAIYLGDTIALH 241
Cdd:PRK13420 172 ALLVL-----LVAGFLVPVPILMLHIIE------ALVQAYIFGMLALIYIAGGIQAH 217
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 34-235 2.31e-11

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 61.25  E-value: 2.31e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  34 MMVLAVTIFWLLLKGDKLIPNRWQSIMELIHLNIRTVVDDNLGKPGQKYFPFVLSLFLFIALLNVLGLFPYVFTPTAQIV 113
Cdd:PRK13421  29 IMAVLAAGSALATRRLSLAPGRLQSVLELVVTTIDAQIRDTMQTDPAPYRALIGTLFLFVLVANWSSLVPGVEPPTAHLE 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943 114 VTFGLSL-----SIIIGVTILGLTAFKSNFLSilvpngaPLVLAPFLVLIETigyISRAVSLGMRLAANLTAGHLLFAIV 188
Cdd:PRK13421 109 TDAALALivflaTIYYGVRARGVRGYLATFAE-------PTWVMIPLNLVEQ---LTRTFSLIVRLFGNVMSGVFVIGIV 178

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 164420943 189 sgfafnmlsgaLSVFPMLIMMFITILEMAVAIIQAYVFCLLTAIYLG 235
Cdd:PRK13421 179 -----------LSLAGLLVPIPLMALDLLTGAVQAYIFAVLAMVFIG 214
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 83-234 8.36e-11

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 59.22  E-value: 8.36e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  83 FPFVLSLFLFIALLNVLGLFPYVFTPTAqiVVTFGLSLSIIIGVTILGLTAFKSNFLSILVPNGAPLVLAPF-LVLIETI 161
Cdd:MTH00087  52 SVISFFTFIVLLLFCFGGLFPYSFSPCG--MVEFTFLYALVAWLSTFLSFLSKSEKFSVYLSKGSDSFLKTFsMLFVEIV 129

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 164420943 162 GYISRAVSLGMRLAANLTAGHLLFaivsgfafnMLSGALSVFPMLIMMFITILEMAVAIIQAYVFCLLTAIYL 234
Cdd:MTH00087 130 SELSRPLALTLRLTVNLMVGHLIS---------SLLNFLGEKYVWLSILAIMMECFVAFIQSYIFSRLIYLYL 193
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 87-227 2.19e-05

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 43.72  E-value: 2.19e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  87 LSLFLFIALLNVLGLF-----PYVFTPTAQIVVTFGLSLSIIIGVTILGLTAFKSNFLSILVPNGAPLVLAPFLVLIETI 161
Cdd:MTH00050  22 VSYYYSVVLFIVLFLFllyrlPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETI 101

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 164420943 162 GYISRAVSLGMRLAANLTAGHLLFAIVSGFAFnmlsgaLSVFPMLIMMFITILEMAVAIIQAYVFC 227
Cdd:MTH00050 102 SYIIRPVVLILRPFINISLGCFGGVALGNLCF------ISYWWFLVLFFLFFYEVFVALVHWFIVS 161
atpI CHL00046
ATP synthase CF0 A subunit
 18-235 9.02e-04

ATP synthase CF0 A subunit


Pssm-ID: 176987  Cd Length: 228  Bit Score: 39.53  E-value: 9.02e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  18 QAFMGDWLVtftntsmmMVLAVTIFWLLLKGDKLIPNRWQSIMELIHLNIRTVVDDNLGKPG-QKYFPFVLSLFLFIALL 96
Cdd:CHL00046  24 QVLITSWVV--------IAILLGSALLATRNLQTIPTGGQNFFEYVLEFIRDLAKTQIGEEEyRPWVPFIGTMFLFIFVS 95

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420943  97 NVLG-LFPY---------VFTPTAQIVVTFGLSLSIII-----GVTILGLTAFKSNFLSilvpngaplvlAPFLVLIETI 161
Cdd:CHL00046  96 NWSGaLLPWklielphgeLAAPTNDINTTVALALLTSVayfyaGLSKKGLGYFGKYIQP-----------TPILLPINIL 164

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 164420943 162 GYISRAVSLGMRLAANLTAGHLLFAIVSgfafnmlsgalSVFPMLIMMFITILEMAVAIIQAYVFCLLTAIYLG 235
Cdd:CHL00046 165 EDFTKPLSLSFRLFGNILADELVVAVLV-----------SLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIG 227
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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