|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 697.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 1 MLKILIPTIMLFPTTWLVPKQWLWTTTTTQSLTVAALSLTWFKWNSETGWTSLNLHLATDQLSTPLLVLTCWLLPLMIIA 80
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWLWTTTLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 81 SQNHIYSEPVNRQRTYISLLISLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00127 81 SQNHTAPEPINRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 161 LLVALLVTQKNTGTLSMLTMYYTQPLNLTMWADNIWWLGCLMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00127 161 LLVALLLLQNSTGTLSMLTLQYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 241 GYGMMRIMMMLDPLTKQLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 321 GLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMFNWSYPTIIITGLG 400
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 237869122 401 TLITASYSLYMFLTTQRGPTTMHTISLTPSHTREHLLMALHIIPVLLLIAKPELLWSWY 459
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILKPELIWGWT 459
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-456 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 683.85 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 1 MLKILIPTIMLFPTTWLVPKQWLWTTTTTQSLTVAALSLTWFKWNSETGwTSLNLHLATDQLSTPLLVLTCWLLPLMIIA 80
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLSKPKFLWTNTTTYSLLIALLSLQWLKPPYYPT-KNLTQWLGIDQISAPLLVLSCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 81 SQNHIYSEPVNRQRTYISLLISLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00124 80 SQNHLQHEPLQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 161 LLVALLVTQKNTGTLSMLTMYYTQPLNLTMWADNIWWLGCLMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00124 160 LLIAILYLHNQTGTLSLPMLQLTHPTLTNSWTNLLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 241 GYGMMRIMMMLDPLTKQLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00124 240 GYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 321 GLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMFNWSYPTIIITGLG 400
Cdd:MTH00124 320 GLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLA 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 237869122 401 TLITASYSLYMFLTTQRGPTTMHTISLTPSHTREHLLMALHIIPVLLLIAKPELLW 456
Cdd:MTH00124 400 TLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILKPELIS 455
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-459 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 675.48 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 1 MLKILIPTIMLFPTTWLVPKQWLWTTTTTQSLTVAALSLTWFKWNSETgWTSLNLHLATDQLSTPLLVLTCWLLPLMIIA 80
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWLWTLTTTNSLIIAFLSLMWFNLPSET-MNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 81 SQNHIYSEPVNRQRTYISLLISLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00068 80 SQNHLKNEPINRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 161 LLVALLVTQKNTGTLSMLTMYYTQPLNLTMWADNIWWLGCLMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 241 GYGMMRIMMMLDPLTKQLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 321 GLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMFNWSYPTIIITGLG 400
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 237869122 401 TLITASYSLYMFLTTQRGPTTMHTISLTPSHTREHLLMALHIIPVLLLIAKPELLWSWY 459
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILKPELISGMF 458
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-454 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 661.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 1 MLKILIPTIMLFPTTWLVPKQWLWTTTTTQSLTVAALSLTWFKWNSETGWtSLNLHLATDQLSTPLLVLTCWLLPLMIIA 80
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTTTYSLLISLISLLLLNQPNDNSL-NFSLLFFSDSLSTPLLILTTWLLPLMLMA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 81 SQNHIYSEPVNRQRTYISLLISLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00110 80 SQHHLSKEPLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 161 LLVALLVTQKNTGTLSMLTM-YYTQPLNLTmWADNIWWLGCLMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKL 239
Cdd:MTH00110 160 LLVALLYIQNNLGSLNFLLLqLWAQPLPNS-WSNNLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKL 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 240 GGYGMMRIMMMLDPLTKQLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIA 319
Cdd:MTH00110 239 GGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALMIA 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 320 HGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMFNWSYPTIIITGL 399
Cdd:MTH00110 319 HGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILMGL 398
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 237869122 400 GTLITASYSLYMFLTTQRGPTTMHTISLTPSHTREHLLMALHIIPVLLLIAKPEL 454
Cdd:MTH00110 399 NMLITALYSLYMLITTQRGKLTHHINNIKPSFTRENTLMALHLLPLLLLSLNPKI 453
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
3-455 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 566.88 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 3 KILIPTIMLFPTTWLVPKQWLWTTTTTQSLTVAALSLTWFKWNSETGWTSLNLHLATDQLSTPLLVLTCWLLPLMIIASQ 82
Cdd:MTH00206 1 KILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 83 NHIYSEPVNRQRTYISLLISLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLL 162
Cdd:MTH00206 81 NHMKNEPINRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 163 VALLVTQKNTGTLSMLTMYYTQplnLTMWADNIWWLGCLMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGY 242
Cdd:MTH00206 161 IALLFLQNSLGSLSLYILYFSK---LTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGY 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 243 GMMRIMMMLDPLTKQLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGL 322
Cdd:MTH00206 238 GMMRIILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGL 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 323 VSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMFNWSYPTIIITGLGTL 402
Cdd:MTH00206 318 VSSALFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFL 397
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 237869122 403 ITASYSLYMFLTTQRGPTTMHTISLTPSHTREHLLMALHIIPVLLLIAKPELL 455
Cdd:MTH00206 398 FTAIYSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-455 |
2.46e-169 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 484.09 E-value: 2.46e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 1 MLKILIPTIMLFPTTWLVPKQWLWTTTTTQSLTVAALSLTWFKWNSETGWTSLNLHLATDQLSTPLLVLTCWLLPLMIIA 80
Cdd:MTH00044 1 MITLILLSLGIAITSWIVPKNKLWPISISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 81 SQNHIYSEPVNRQRTYISLLISLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00044 81 SINHLSNNSPNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 161 LLVALLVTQKNTGTLSMLTMYYTQPLNLTMWADNIWWLGCLMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 241 GYGMMRIMMMLD-PLTKQLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIA 319
Cdd:MTH00044 241 GYGLIRLINLFSlPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 320 HGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMFNWSYPTIIITGL 399
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 237869122 400 GTLITASYSLYMFLTTQRGPTTMHTISLTPSHTREHLLMALHIIPVLLLIAKPELL 455
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNII 456
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
44-459 |
5.03e-135 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 394.98 E-value: 5.03e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 44 WNSET-GWTSLNLHLATDQLSTPLLVLTCWLLPLMIIASQNHIysEPVNRQRTYISLLISLQTFLIMAFGATEIIMFYIM 122
Cdd:MTH00150 6 LYSSFsSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSV--KLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFYFF 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 123 FEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLVTQKNTGTLSMLTMYYTQPLNLTMWadnIWWLGCLM 202
Cdd:MTH00150 84 FEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMG---LWGLLVFL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 203 AFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLDPLTKQLAYPFIILALWGIIMTGSICLRQTD 282
Cdd:MTH00150 161 AFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSD 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 283 LKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFI 362
Cdd:MTH00150 241 VKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 363 ANLANLALPPLPNLMGELTIITSMFNWSYPTIIITGLGTLITASYSLYMFLTTQRGPTTMHTISLTPSHTREHLLMALHI 442
Cdd:MTH00150 321 FCIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHW 400
|
410
....*....|....*..
gi 237869122 443 IPVLLLIAKPELLWSWY 459
Cdd:MTH00150 401 VPLLLLILKSDLLFMWI 417
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-458 |
1.79e-131 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 387.20 E-value: 1.79e-131
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 1 MLKILIPTIMLFPTTWLVpkqwlWTTTTTQSLTVAALSLTWFKWNSETGWTSLNLHLATDQLSTPLLVLTCWLLPLMIIA 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLK-----NSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILS 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 81 SQNhiYSEPVNRQRTYISLLISLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00163 76 SES--VYKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLP 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 161 LLVALLVTQKNTGTLSMLTMYYTQPLNLtmwadnIWWLGCLMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00163 154 LLVGIFYLYNNSGSLSFFLLNFFGSLNF------LWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLG 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 241 GYGMMRIMMMLDPLTKQLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00163 228 GYGLLRVMSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGH 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 321 GLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMFNWSYPTIIITGLG 400
Cdd:MTH00163 308 GLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLL 387
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 237869122 401 TLITASYSLYMFLTTQRGPTTMHTISLTPSHTREHLLMALHIIPVLLLIAKPELLWSW 458
Cdd:MTH00163 388 SFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
34-455 |
5.76e-121 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 360.45 E-value: 5.76e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 34 VAALSLTWFKWNSETGWTSLNLHLATDQLSTPLLVLTCWLLPLMIIASQNhiYSEPVNRQRTYISLLISLQTFLIMAFGA 113
Cdd:MTH00205 30 IGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYK--VFKSNKNSKLFTVSVIMLLLILILSFSV 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 114 TEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLVTQKNTGTLSMLTMYytqPLNLTMWAD 193
Cdd:MTH00205 108 DNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNF---PLNFSDFYL 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 194 NIWWLGCLMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLDPLTKQLAYPFIILALWGIIMT 273
Cdd:MTH00205 185 FLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSELFFSISLWGGVMT 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 274 GSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTIL 353
Cdd:MTH00205 265 GMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTF 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 354 PLMATWWFIANLANLALPPLPNLMGELTIITSMFNWSYPTIIITGLGTLITASYSLYMFLTTQRGPTTMHTISLTPSHTR 433
Cdd:MTH00205 345 PFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSFLAISER 424
|
410 420
....*....|....*....|..
gi 237869122 434 EHLLMALHIIPVLLLIAKPELL 455
Cdd:MTH00205 425 EYYILILHWFPLNILILKLKIF 446
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-458 |
1.63e-119 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 356.74 E-value: 1.63e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 1 MLKILIPTIMLFPTTwLVPKQWLWTTTTTQSLTVAALSLTWFKWNSeTGWTSLNLHLATDQLSTPLLVLTCWLLPLMIIA 80
Cdd:MTH00014 1 MLKLIMPLISLLLLP-LIKYPWSWALTFSTLLLLSLFTLLNLYPMS-APYSMFTESLSSDMLSAPLITLTLWITALMILA 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 81 SQNHIYSEpvNRQRTYISLLISLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
Cdd:MTH00014 79 SFKIFQNN--KAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLP 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 161 LLVALLVTQKNTGTLSMLTMYYTQPLNLTMwadNIWWLGCLMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
Cdd:MTH00014 157 LLMSILLIFYTNNSLSMLMSSMEPPSIYLM---NLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 241 GYGMMRIMMMLDPLTKQLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
Cdd:MTH00014 234 GYGLLRMSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAH 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 321 GLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMFNWSYPTIIITGLG 400
Cdd:MTH00014 314 GLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAIT 393
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 237869122 401 TLITASYSLYMFLTTQRGPTTMHTISLTPSHTREHLLMALHIIPVLLLIAKPELLWSW 458
Cdd:MTH00014 394 SFLAAAYSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNW 451
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
53-448 |
1.24e-96 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 299.30 E-value: 1.24e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 53 LNLHLATDQLSTPLLVLTCWLLPLMIIASQNHIYsepvNRQRTYISLLISLQTFLIMAFGATEIIMFYIMFEATLIPTLI 132
Cdd:COG1008 74 ISYHLGVDGISLPLVLLTALLTPLAILASWNEIK----KRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYF 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 133 IITRWGNQtERLNAGTYFLFYTLAGSLPLLVAL--LVTQKNTGTLSMLTMYYTQ-PLNLTMWAdniwWLGCLMAFLVKMP 209
Cdd:COG1008 150 LIGIWGGE-RRIYAAIKFFLYTLAGSLLMLVAIlaLYFLAGALTFDIAELAAAPlPLTAQLLL----FLAFFIAFAVKVP 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 210 LYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLDPL-TKQLAYPFIILALWGIIMTGSICLRQTDLKSLIA 288
Cdd:COG1008 225 MFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEaSAYFAPLLAALGVIGIIYGALVALAQTDLKRLIA 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 289 YSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANL 368
Cdd:COG1008 305 YSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASL 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 369 ALPPLPNLMGELTIITSMFNWSYPTIIITGLGTLITASYSLYMFLTTQRGPTTMHTISLTPSHTREHLLMALHIIPVLLL 448
Cdd:COG1008 385 GLPGTSGFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLL 464
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
53-448 |
4.27e-89 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 280.17 E-value: 4.27e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 53 LNLHLATDQLSTPLLVLTCWLLPLMIIASQNHIysepVNRQRTYISLLISLQTFLIMAFGATEIIMFYIMFEATLIPTLI 132
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTALLTPLAVLASWEEI----KKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYF 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 133 IITRWGnQTERLNAGTYFLFYTLAGSLPLLVALL----VTQKNTGTLSMLTMYYTqplNLTMWADNIWWLGCLMAFLVKM 208
Cdd:PRK05846 150 LIGVWG-GKNRIYAATKFFLYTLLGSLLMLVAIIylvvVYYNATGTFDIADLLNL---PLPPGVQYWLFLAFFIAFAVKM 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 209 PLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLDPL-TKQLAYPFIILALWGIIMTGSICLRQTDLKSLI 287
Cdd:PRK05846 226 PMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLI 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 288 AYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLAN 367
Cdd:PRK05846 306 AYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMAS 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 368 LALPPLPNLMGELTIITSMFNWSYPTIIITGLGTLITASYSLYMFLTTQRGPTTMHTISLTPSHTREHLLMALHIIPVLL 447
Cdd:PRK05846 386 LGLPGTSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVALLLL 465
|
.
gi 237869122 448 L 448
Cdd:PRK05846 466 L 466
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
53-448 |
2.32e-81 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 259.49 E-value: 2.32e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 53 LNLHLATDQLSTPLLVLTCWLLPLMIIASQNHIYsepvNRQRTYISLLISLQTFLIMAFGATEIIMFYIMFEATLIPTLI 132
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLTALLTLLAILASWESIQ----KRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYL 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 133 IITRWGNQTeRLNAGTYFLFYTLAGSLPLLVALLVTQ-KNTGTLSMLTMYytqPLNLTMWADNIWWLGCLMAFLVKMPLY 211
Cdd:TIGR01972 145 LIGVWGGPN-RIYAAMKFFLYTLAGSLLMLLAILGLYfLGGGTFDLLELL---NLPLPFGVQTWLFLAFFIAFAVKVPLF 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 212 GVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLDP-LTKQLAYPFIILALWGIIMTGSICLRQTDLKSLIAYS 290
Cdd:TIGR01972 221 PLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPdASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYS 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 291 SVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANLAL 370
Cdd:TIGR01972 301 SISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGL 380
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 237869122 371 PPLPNLMGELTIITSMFNWSYPTIIITGLGTLITASYSLYMFLTTQRGPTTMHTISLTPS-HTREHLLMALHIIPVLLL 448
Cdd:TIGR01972 381 PGTSGFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSNPEVAEFPDlNGREIAVLAPLVVLILFL 459
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
42-412 |
2.02e-74 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 241.51 E-value: 2.02e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 42 FKWNSETGWTSLN--------LHLATDQLSTPLLVLTCWLLPLMIIASQNHIYSepvnRQRTYISLLISLQTFLIMAFGA 113
Cdd:MTH00204 56 FQFINLIEWIISPtlnfqwgpLVFAVDGVSLFFILLTTLLIPICILISWKSIKF----LFKEFLLCLLFLEVLLIGVFSV 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 114 TEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLVTQKNTGTLSMLTMYYTQ-PLNLTMWA 192
Cdd:MTH00204 132 LDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKlPLSIQKWL 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 193 dniwWLGCLMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLDPLTKQLAYPFII-LALWGII 271
Cdd:MTH00204 212 ----LVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVmLSVIAVI 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 272 MTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQT 351
Cdd:MTH00204 288 YGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTL 367
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 237869122 352 ILPLMATWWFIANLANLALPPLPNLMGELTIITSMFNWSYPTIIITGLGTLITASYSLYMF 412
Cdd:MTH00204 368 TMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
42-412 |
1.44e-70 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 231.48 E-value: 1.44e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 42 FKWNSETGWTSLNLHLATDQLSTPLLVLTCWLLPLMIIASQNHIYSepvnRQRTYISLLISLQTFLIMAFGATEIIMFYI 121
Cdd:MTH00217 61 FEWIPGIEPVFGPVVFAVDGISIFFLILTALLTPICILISWNSIKF----LIKEFLLCLLVIEILLMGVFTILDLVGFYI 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 122 MFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLVTQKNTGTLSMLTMYytqPLNLTMWADNIWWLGCL 201
Cdd:MTH00217 137 LFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALC---CLKIEKELQYFIFLGFF 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 202 MAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLDPLTKQLAYPFI-ILALWGIIMTGSICLRQ 280
Cdd:MTH00217 214 LSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIqTLSLLAIIYGSLTTCRQ 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 281 TDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWW 360
Cdd:MTH00217 294 VDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILM 373
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 237869122 361 FIANLANLALPPLPNLMGELTIITSMFNWSYPTIIITGLGTLITASYSLYMF 412
Cdd:MTH00217 374 LLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
113-401 |
2.08e-68 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 219.88 E-value: 2.08e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 113 ATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLVTQKNTGTLSMLTMYYTQPLNLTMWA 192
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 193 DNIWWLGCLMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLDPLTKQLAYPFIILALWGIIM 272
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 273 TGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLA-NTNYERTHSRTLLLARGLQT 351
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 237869122 352 ILPLMATWWFIANLANLALPPLPNLMGELTIITSMFNWSYPTIIITGLGT 401
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
55-410 |
5.36e-65 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 217.48 E-value: 5.36e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 55 LHLATDQLSTPLLVLTCWLLPLMIIASQNHIYSepvnRQRTYISLLISLQTFLIMAFGATEIIMFYIMFEATLIPTLIII 134
Cdd:MTH00226 96 LVFAVDGISIYFIILTGFIVPCSILISWHSVKY----LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLIL 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 135 TRWGNQTERLNAGTYFLFYTLAGSLPLLVALLVTQKNTGTLSMLTMY---YTQPLNLTMWAdniwWLGCLMAFLVKMPLY 211
Cdd:MTH00226 172 GIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLAscsHVVSEQTQKWI----FLGIFLAMAVKIPIF 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 212 GVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLDPLTKQ-LAYPFIILALWGIIMTGSICLRQTDLKSLIAYS 290
Cdd:MTH00226 248 PFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQnLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYS 327
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 291 SVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANLAL 370
Cdd:MTH00226 328 SVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAV 407
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 237869122 371 PPLPNLMGELTIITSMFNWSYPTIIITGLGTLITASYSLY 410
Cdd:MTH00226 408 PPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFY 447
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-411 |
9.65e-57 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 195.64 E-value: 9.65e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 53 LNLHLATDQLSTPLLVLTCWLLPLMIIASQNhiysepVNRQ-RTYISLLISLQTFLIMAFGATEIIMFYIMFEATLIPTL 131
Cdd:PRK12561 51 LEWSLGVDGLSMPLVLLSGLITTLSIFASWK------VTRKpRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVY 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 132 IIITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLVTQKNTGT----LSMLTMYyTQPLNLTMWAdniwWLGCLMAFLVK 207
Cdd:PRK12561 125 LLISIWGGQ-KRLYAATKFILYTALASIFILVAGLALALSGDTftfdLAELGAK-SYPLALELLL----YAGFLIAFGVK 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 208 MPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI-MMMLDPLTKQLAYPFIILALWGIIMTGSICLRQTDLKSL 286
Cdd:PRK12561 199 LPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRR 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 287 IAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLA 366
Cdd:PRK12561 279 LAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMPKTFALFTASSMA 358
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 237869122 367 NLALPPLPNLMGELTI---ITSMFNWSYP----TIIITGLGTLITASYSLYM 411
Cdd:PRK12561 359 SLALPGMSGFVSELTVflgITSSDVYSSTfrtiTILLAAVGLILTPIYLLSM 410
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
57-411 |
1.25e-48 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 173.59 E-value: 1.25e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 57 LATDQLSTPLLVLTCWLLPLMIIASQnhiysePVNRQ-RTYISLLISLQTFLIMAFGATEIIMFYIMFEATLIPTLIIIT 135
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAW------PVTRNsRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLS 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 136 RWGNQtERLNAGTYFLFYTLAGSLPLLVALLVTQ---KNTGTLSMLTMYYTQ-PLNLTMwadnIWWLGCLMAFLVKMPLY 211
Cdd:CHL00011 154 MWGGK-KRLYSATKFILYTAGGSIFLLIGVLGMGlygSNEPTLNFETLANQSyPVALEI----LFYIGFLIAYAVKLPII 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 212 GVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLDPLTKQLAYPF-IILALWGIIMTGSICLRQTDLKSLIAYS 290
Cdd:CHL00011 229 PLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWlVIVGAIQIIYAASTSLGQRNLKKRIAYS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 291 SVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERThsRTLLLAR--GLQTILPLMATWWFIANLANL 368
Cdd:CHL00011 309 SVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRI--RLVYLDEmgGIAIPMPKIFTMFSSFSMASL 386
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 237869122 369 ALPPLPNLMGELT----IITSMFNWSYPTIIIT---GLGTLITASYSLYM 411
Cdd:CHL00011 387 ALPGMSGFVAELIvffgIITSQKYLLMPKILITfvmAIGMILTPIYLLSM 436
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
56-416 |
2.01e-47 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 168.79 E-value: 2.01e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 56 HLATDQLSTPLLVLTCWLLPLMIIASQNhiYSEPVNRQRTYISLLISLQTFLIMAFGATEIIMFYIMFEATLIPTLIIIT 135
Cdd:COG0651 71 VLVADRLSALFLLLTALVALAVLLYSIG--YMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 136 RWGNQtERLNAGTYFLFYTLAGSLPLLVALLVTQKNTGTLSMLTMYYTQPLNLTMWADNIWWLgCLMAFLVKMPLYGVHL 215
Cdd:COG0651 149 LGGTK-EALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFAL-LLVGFGIKAALFPLHF 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 216 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLDP--LTKQLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVS 293
Cdd:COG0651 227 WLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGadPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVS 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 294 HMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANLALPPL 373
Cdd:COG0651 307 QIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPL 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 237869122 374 PNLMGELTIITSMFN-WSYPTIIITGLGTLITASYSLYMFLTTQ 416
Cdd:COG0651 387 SGFVSKWLLLQAALEaGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
106-410 |
6.54e-46 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 164.31 E-value: 6.54e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 106 FLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLvtqKNTGTLSMltMYYTQP 185
Cdd:MTH00094 74 ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL---KNFFFFSL--CYFDFF 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 186 LNLTMWadniwwLGCLMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLDPLtkqLAYPFIIL 265
Cdd:MTH00094 149 LSWEMF------FILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFV---YNNFWIIF 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 266 ALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLL 345
Cdd:MTH00094 220 SLLGMILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYF 299
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 237869122 346 ARGLQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMFNWSYPTIIITGLGTLITASYSLY 410
Cdd:MTH00094 300 MNSFFSSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLF 364
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-460 |
6.40e-44 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 161.41 E-value: 6.40e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 53 LNLHLATDQLSTPLLVLTCWLLPLMIIASQnhiysePVN-RQRTYISLLISLQTFLIMAFGATEIIMFYIMFEATLIPTL 131
Cdd:PRK02546 79 LTWSVGADGLSMPLILLTGFITTLAVLAAW------PVTfKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVY 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 132 IIITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLVTQKNTGTLSmLTMYYTQPLNLTMWADNIWWLGCLMAFLVKMPLY 211
Cdd:PRK02546 153 LLLAIWGGK-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPT-FDMTALAAKDFGLGFQLLCYAGLLIAYGVKLPIV 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 212 GVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI-MMMLDPLTKQLAYPFIILALWGIIMTGSICLRQTDLKSLIAYS 290
Cdd:PRK02546 231 PLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYS 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 291 SVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANLAL 370
Cdd:PRK02546 311 SISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLAL 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 371 PPLPNLMGELTIITSM-----FNWSYPTIII--TGLGTLITASYSLYMFLTTQRGPTTMHTIS---LTPSHTREHLLMAL 440
Cdd:PRK02546 391 PGMSGFVAELMVFVGFatsdaYTLPFRVVVVflAAVGVILTPIYLLSMLREIFFGPENKELVShekLVDAEPREVFIIAC 470
|
410 420
....*....|....*....|
gi 237869122 441 HIIPVLLLIAKPELLWSWYA 460
Cdd:PRK02546 471 LLVPIIGIGLYPKLVTQSYD 490
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
53-458 |
4.33e-42 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 156.01 E-value: 4.33e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 53 LNLHLATDQLSTPLLVLTCWLLPLMIIASqnhiySEPVNRQRTYISLLISLQTFLIMAFGATEIIMFYIMFEATLIPTLI 132
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSS-----DESIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 133 IITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLvtqkNTGTLSMLTMYYTQPLN---LTMWADNIWWLGCLMAFLVKMP 209
Cdd:PRK06473 146 LIAIWGGQ-RRGYAATKFLLYTAISGILILVSFL----GLVWLSGASSFDYEPLRshtLPLSTQLLLLAPILVGFGIKIP 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 210 LYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLDPLTKQLAYPFiiLALWGII--MTGSIC-LRQTDLKSL 286
Cdd:PRK06473 221 LVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPW--LATWAVVsvLYGASCaIAQKDMKKM 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 287 IAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGL---QTILPLMATWWFIA 363
Cdd:PRK06473 299 VAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLlnpERGLPITGSLMILG 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 364 NLANLALPPLPNLMGELTIITSMFNWSYPTIIITGLGTLITASYSLYMFLTTQRGPTTMHTISLTPSHTREHLLMALHII 443
Cdd:PRK06473 379 VMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVNRVFFGRLTAELSNLPRVLWSERLPALVLAV 458
|
410
....*....|....*
gi 237869122 444 PVLLLIAKPELLWSW 458
Cdd:PRK06473 459 LIVVLGIQPSWLVRW 473
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
41-387 |
8.53e-31 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 124.44 E-value: 8.53e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 41 WFKWNSETGwtsLNLHLATDQLSTPLLVLTCWLLPLMIIASqnhiySEPVNRQRTYISLLISLQTFLIMAFGATEIIMFY 120
Cdd:PRK07363 62 YLPWNEPLG---LSYSLGVDGLSLPLLVLNSLLTWIAIYSI-----GENTERPRLYYSLILLINGGIAGALLAQNLLLFF 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 121 IMFEATLIPTLIIITRWGNQtERLNAGTYFLFYTLAGSLPLLVALLVTQKNTGTLSmLTMYYTQPLNLTMWADNIWWLGC 200
Cdd:PRK07363 134 LFYELELIPFYLLIAIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTS-FDYDAISTQNLSLNTQLILLTGL 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 201 LMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLDPLTKQLAYPfiILALWGII--MTGS-IC 277
Cdd:PRK07363 212 LLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAP--GLAIIGTIsvIYGAlSA 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 278 LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTI---LP 354
Cdd:PRK07363 290 IAQKDIKRMVAYSSIGHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPirgLP 369
|
330 340 350
....*....|....*....|....*....|...
gi 237869122 355 LMATWWFIANLANLALPPLPNLMGELTIITSMF 387
Cdd:PRK07363 370 LTSALLVLAGMASAGIPGLVGFVAEFIVFQGSF 402
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-457 |
1.23e-27 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 115.45 E-value: 1.23e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 57 LATDQLSTPLLVLTCWLLPLMIIASQNHIYSEPVNRqrTYISLLISLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITR 136
Cdd:PRK12667 78 YEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPE--WYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAY 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 137 WGNQTERLNAGTYFLFYTLAGSLPLLVALLVTQKNTGTLSM-------LTMYYTQPLNLT---MWADNIWWLGCLMAFLV 206
Cdd:PRK12667 156 YRDRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFGTLNMadlsakiRGLSFPLTGGLAgnpPLALGVALALALWAFTI 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 207 KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMM-------LDPLTKQLAYPFIILALWGIIMTGSICLR 279
Cdd:PRK12667 236 KAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTifgispsLIDFRAALSPILIILGAVSAIIGALMMVV 315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 280 QTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATW 359
Cdd:PRK12667 316 QKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFA 395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 360 WFIANLANLALPPLPNLMGELTIITSMFNWS-YPTIIITGLGTLITASYSLYMFLTTQRGPTTMHT-ISLTPSHTREHLL 437
Cdd:PRK12667 396 FLIGALSLVGIPPLNGFFSKLLLFNALLESGfYLPALVLLIASAISLVGYFRAWYSLFFGKPKSGEeVEHKESPSMSVVI 475
|
410 420
....*....|....*....|...
gi 237869122 438 MALHIIPV---LLLIAKPELLWS 457
Cdd:PRK12667 476 LVLALAVLilgILALFLPEILDS 498
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-110 |
6.68e-26 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 101.45 E-value: 6.68e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 1 MLKILIPTIMLFPTTWLVPKQWLWTTTTTQSLTVAALSLTWFKWNSETGWTSLNLHLATDQLSTPLLVLTCWLLPLMIIA 80
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWLWTTSTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 237869122 81 SQNHIYSEPVNRQRTYISLLISLQTFLIMA 110
Cdd:pfam01059 81 SQKHLKSEPNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-407 |
9.41e-26 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 109.58 E-value: 9.41e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 57 LATDQLSTPLLVLTcwllplMIIASQNHIYSEPVN--RQRTYISLLISLQTFLIMAFGATEIIMFYIMFEATLIPTLIII 134
Cdd:PRK08375 73 LRADSLSALFLLVT------SILAIAALLYAIGYGehRQTRFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALV 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 135 TRWGNQtERLNAGTYFLFYTLAGSLPLLVALLVTQKNTGTLsmltmyytqplNLTMWADNIWWLG--------CLMAFLV 206
Cdd:PRK08375 147 AMGGDR-RALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTL-----------NMADLAGALAENPtvvtafgfVLLALAL 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 207 KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMM----MLDPLTKQLAYPFIILALWGIIMTGSICLRQTD 282
Cdd:PRK08375 215 KAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYFtvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDD 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 283 LKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFI 362
Cdd:PRK08375 295 VKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAV 374
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 237869122 363 ANLANLALPPLPNLMGELTIITSMFN-WSYPTIIITGLGTLITASY 407
Cdd:PRK08375 375 ASLSLIGVPPTSGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLY 420
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
201-459 |
2.78e-23 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 102.32 E-value: 2.78e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 201 LMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLD--PLTKQLAYPFIILALWGIIMTGSICL 278
Cdd:PRK06458 221 LIGFGTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDaaIGSDFPGRLLLIFGLLSVLVAAFFLL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 279 RQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMAT 358
Cdd:PRK06458 301 RQRDIKRLFAYSSIEHMGLIAFALGIGGPLGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGW 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 359 WWFIANLANLALPPLPNLMGELTIITSMFNWSYPTIIITGLGTLITASYSLYMFLTTQRGPTTMHTISLTPSHTREHLLM 438
Cdd:PRK06458 381 GLMLGALAIAGMPPFGVFISEFLILTAGLARGPLLIAILLLLLLTLAFAALVRRVAGMVFGEPPEAVNRGDLGWLTTSPM 460
|
250 260
....*....|....*....|..
gi 237869122 439 ALHIIPVLLL-IAKPELLWSWY 459
Cdd:PRK06458 461 FVHLVLVLVLgLYIPQPLVRWL 482
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
55-421 |
4.59e-18 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 86.16 E-value: 4.59e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 55 LHLATDQLSTpLLVLTCWLLPLMIIasqnhIYSEPVNRQRTYISLLISLQTFLIMAFGATEIIMFYIMFEATLIPTLIII 134
Cdd:PRK07234 61 VTLRADALSG-YFILTNALVTLAVI-----FYCWESAKTRFFYAQLLILHGSVNAAFVCADLISLYVALEVLSIATFLLV 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 135 TrWGNQTERLNAGTYFLFYTLAGSLPLLVALLVTQKNTGTLSMLTMYYTQPLNLTMWAdniwwlgclMAFLVKMPLYGVH 214
Cdd:PRK07234 135 A-YPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATADPEAFALIA---------LGLLVKGGIFVSG 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 215 LWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLDPLTKQLAYPFIILALWGIImtgsICLRQTDLKSLIAYSSVSH 294
Cdd:PRK07234 205 LWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFGVGTALLGVL----FALLEKDLKRMLAFSTISQ 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 295 MGLVAGGILIqtpwgftgALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMatwwfianLANLALPPLP 374
Cdd:PRK07234 281 LGFILAAPLV--------GGLYALAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIPLT--------MASFSIAGFP 344
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 237869122 375 NLMGELTIITSMFN---WSYPTIIITGLGTLITASYSLYMFLTTQRGPTT 421
Cdd:PRK07234 345 LLAGFVSKVLTLKNllpWQAIALNLAAVGTAASFWKFIFLPFSADDEDKK 394
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
50-387 |
5.12e-18 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 86.71 E-value: 5.12e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 50 WTSLNLHLATDQLSTPLLVLTCWLLPLMIIASQNHIYSEPVNRQRTYISLLISLQTF-LIMAFGATEIIMFYIMFEATLI 128
Cdd:PRK08667 66 APGLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNEHMSSNERANLLSALTALFILsMLGVVASANTFSFLFFWEIMAL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 129 PTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLVTQKNTGTLSMLTMYYTQPLNltmwadNIWWLGCLMAFLVKM 208
Cdd:PRK08667 146 SSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLGASAGIL------SLVFLLLFLGFGIKA 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 209 PLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMmlDPLTKQLAYPFIIL------ALWGIIMTgsicLRQTD 282
Cdd:PRK08667 220 GIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLM--DVLSPELWWGVLILlagsisALLGVIYA----LKEHD 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 283 LKSLIAYSSVSHMGLVAGGILIQTPWGFTG-----------ALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQT 351
Cdd:PRK08667 294 LKGLLAYSSIENIGIILMGIGLYVIFGVYGldtlallalggALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVK 373
|
330 340 350
....*....|....*....|....*....|....*.
gi 237869122 352 ILPLMATWWFIANLANLALPPLPNLMGELTIITSMF 387
Cdd:PRK08667 374 LMPYTSALFLVGAVSIAALPPFNGFASELLLYESFF 409
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
113-434 |
1.54e-16 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 82.40 E-value: 1.54e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 113 ATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTyfLFYTLAGSLPLLVALLVTQKNTGTLSMLTMyytqpLNLTMWA 192
Cdd:PRK12650 129 ADDVVVLFVAWELVSLASFFLIARSGSGGEAGSIRT--LILTFFGGLTLLAAVAIAATQTGTTSLSGI-----LHSDVWA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 193 DNIWWLGCL-----MAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMR--IMMMLDPLTKQLaypFIIL 265
Cdd:PRK12650 202 EKPGLTTVVavliaVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRfsPVFHDVAVWNWL---LIIV 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 266 ALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLL 345
Cdd:PRK12650 279 GMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRR 358
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 346 ARGLQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMF-----NWSYPTIIIT-GLGTLITASYSL-YMFLTTQRG 418
Cdd:PRK12650 359 LGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLeapggNAGVVLLLVGaALGAVFTFAYSArLVLGAFVDG 438
|
330
....*....|....*.
gi 237869122 419 PTTMhtisltpSHTRE 434
Cdd:PRK12650 439 PRDM-------SHVKE 447
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
96-455 |
1.33e-15 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 78.84 E-value: 1.33e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 96 YISLLISLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITrWGNQTERLNAGTYFLFYTLAGSLPLLVALLVTQKNTGTL 175
Cdd:PRK12663 110 FPPFILLLMAGVIGSFLTGDLFNLYVWFEVMLIASFVLIT-LGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 176 SMLtmyytqplNLTMWADNIWWLGCLM--------AFLVKMPLYGVHlWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI 247
Cdd:PRK12663 189 NMA--------HIAMRLNDMGDTATLTtiallfllAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRV 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 248 MMMLDPLTKQLAYPFIILALWGIIMTGSI-CLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSS 326
Cdd:PRK12663 260 FTLLFPQERELLHPLLATMAAITMVIGALgALAYKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTA 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 327 LFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMFN----WSYPTIIITGLGTL 402
Cdd:PRK12663 340 LFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDngayILLALMLITSLITM 419
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 237869122 403 itasYSLY-MFLTTQRGPTTMHTISLTPSHTREHLLMALHIIPVLLLIAKPELL 455
Cdd:PRK12663 420 ----YSLFrIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILAVVVIAMGIAAEPL 469
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
101-383 |
1.70e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 78.47 E-value: 1.70e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 101 ISLQTFLI------MAFGATEIIMFYIMFEATLIPTLIIITRwGNQTERLNAGTYFLFYTLAGSLPLLVALLVTQKNTGT 174
Cdd:PRK12665 112 IFLPTYLIlvagvsNAFLAGDLFNLYVGFEILLVASYVLLTL-GATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGT 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 175 LSMLTMYYTQPlNLTMWADNIWWLGCLMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLDPl 254
Cdd:PRK12665 191 LNMADLAVRLD-ELPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP- 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 255 TKQLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTN 334
Cdd:PRK12665 269 GGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLI 348
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 237869122 335 YERTHSRTLLLARGLQTILPLMATWWFIANLaNLA-LPPLPNLMGELTII 383
Cdd:PRK12665 349 ERQAGSSSLRRLGGLAKASPLLAVLFFVPAL-NLGgIPPFSGFIGKVALL 397
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
111-373 |
5.76e-15 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 77.34 E-value: 5.76e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 111 FGATEIIMFYIMFEATLIPTLIIITRwGNQTERLNAGTYFLFYTLaGSLPLLVALLVTQKNTGTL---SMLTMYYTQPLN 187
Cdd:PRK08668 115 FLANDLLTLYIFWEIMTFSSFMMVPM-GKKESRKASLKYFVLSAI-GAYAMLYAIFLIYAKTGTFdfaDISQGLINDTST 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 188 LTMWadnIWWLGCLMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLdPLTK----------- 256
Cdd:PRK08668 193 GFAL---IVFLFLLAFGVAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLLVLYVL-PGTKlfsefgtyrgv 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 257 -QLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNY 335
Cdd:PRK08668 269 pLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHALFKGLFFLIFAAVI 348
|
250 260 270
....*....|....*....|....*....|....*...
gi 237869122 336 ERTHSRTLLLARGLQTILPLMATWWFIANLANLALPPL 373
Cdd:PRK08668 349 YRTGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPM 386
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
201-413 |
7.05e-15 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 76.72 E-value: 7.05e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 201 LMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMML--DPLTKQLAYPFIILALWGIIMTGSICL 278
Cdd:PRK08676 213 FIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLrqSGAAEQFSNVLIGLGIFSIAVAAFSML 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 279 RQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMAT 358
Cdd:PRK08676 293 SQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAW 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 237869122 359 WWFIANLANLALPPLPNLMGELTIITSMFNWSyPTIIITGLGTLITASYSLYMFL 413
Cdd:PRK08676 373 GVILGSAAIIGMPPFPLFLSKFFILLQLGGIS-VWLVLAVLLLLLLAASSFAIFL 426
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
34-458 |
4.39e-14 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 74.00 E-value: 4.39e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 34 VAALSLTWFKWNSETGwTSLNLHLATDQLSTPLLVLTCWLLPLMIIASQNHIYSEPVNRQRTYISLLISLQTFLIMAfGA 113
Cdd:COG1007 44 LLALALLLLALGGGTG-TAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYLERRGLLRGEFYALLLFATLGMMLMA-SA 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 114 TEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGT-YFLFYTLAGSLPLL-VALLVTQknTGTLSMLTMyyTQPLNLTMW 191
Cdd:COG1007 122 NDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALkYFLLGALSSGFLLYgISLLYGA--TGSLNLAGI--AAALAAGGA 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 192 ADNIWWLGCLM---AFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM-MRIMMM-LDPLTKQLAYPFIILA 266
Cdd:COG1007 198 NSPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAAlLRLLVEaFPGLAADWQLLLAVLA 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 267 LwgIIMT-GSIC-LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLF-CLANTNYERTHSRTL 343
Cdd:COG1007 277 V--LSMTvGNLAaLAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEI 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 344 LLARGLQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMFNWSYPTIIITG-LGTLITASYSL----YMFLttqRG 418
Cdd:COG1007 355 EDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAvLNSVISAYYYLrvvkAMYF---DE 431
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 237869122 419 PTTMHTISLTPSHTrehLLMALHIIPVLLLIAKPELLWSW 458
Cdd:COG1007 432 PEEEAPISAPPGLR---VALVIAALLVLLLGIFPGPLLDL 468
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
73-345 |
1.61e-13 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 71.88 E-value: 1.61e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 73 LLPLMI-IASQNHIYSEPVNRQRtyISLLISLqTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFL 151
Cdd:MTH00062 52 LLVLFLgLYSQVMFYNLLSGVSR--FFLFLSL-IFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 152 FYTLAGSLPLLVALLVTQKNTGTLSMLTMYYTQPLNLTmwadnIWWLGCLMaFLVKMPLYGVHLWLPKAHVEAPIAGSMV 231
Cdd:MTH00062 129 GYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSDDSVSLI-----VYYVLSFM-FITKVPLFPFHTWLPIVHAEASSPVSIF 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 232 LAAVLLKLGGYGMMRIMMMLDPLTKQLAYPFIILALWGIIMTGSICLrqtDLKSLIAYSSVSHMGLVAGGILIQTPWGFT 311
Cdd:MTH00062 203 LSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVFFLITACSEL---DGKRWLAFLSLSHILVPVLGLFVGDWSSIN 279
|
250 260 270
....*....|....*....|....*....|....
gi 237869122 312 GALILMIAHGLVSSSLFCLANTNYERTHSRTLLL 345
Cdd:MTH00062 280 LSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVL 313
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
99-407 |
3.18e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 71.67 E-value: 3.18e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 99 LLISLQTFLIMAFGatEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFY-TLAGSLPLL-VALLVTQKNTGTLS 176
Cdd:PRK08376 128 LLLELGMLGMAITG--DLFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVgSLASSMVLLgIALLYGQYGTLNMA 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 177 MLTMYYTQ-PLNLTMWAdniwwLGCLMA-FLVKMPLYGVHLWLPKAHVEAPIAGSMVLaaVLLKLGG-YGMMRIMMMLDP 253
Cdd:PRK08376 206 YLAVKMSEnPTVVAKIA-----LALFIAgLAMKSGAVPVHMWLPDAYPAAPSSISAML--LVIKQAGlYALARVLFSIYG 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 254 LT---KQLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMG---------LVAGGILIQTPWGFT---GALILMI 318
Cdd:PRK08376 279 PAinlATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGymllglgvgLAALGDPAMASYGEIalaGGIYHIV 358
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 319 AHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMFNWSYPTIIITG 398
Cdd:PRK08376 359 NHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLIYESSALFNPILGVIAM 438
|
330
....*....|
gi 237869122 399 LGT-LITASY 407
Cdd:PRK08376 439 IGSvLTLASF 448
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
118-373 |
2.44e-12 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 69.15 E-value: 2.44e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 118 MFYIMFEA-TLIPTLIIITrwgNQTERLNAGTYFLFYTLA--GSLPLLVALLVTQKNTGTLSMLTMyytQPLNLTMWADN 194
Cdd:PRK06521 137 SFLVAWETmSLSSWFLVIA---NHREAEIRRAGFLYLLMAhaGALAILLAFGLLARESGSYDFAAM---RAAHLSPFWAS 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 195 IWWLGCLMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLDPlTKQLAYPFIILALWGIIMTG 274
Cdd:PRK06521 211 LVFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLG-APGWWWGVLVLALGAISAVL 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 275 SI--CLRQTDLKSLIAYSSVSHMGLV-----------AGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSR 341
Cdd:PRK06521 290 GVlyALAEHDLKRLLAYSTIENIGIIfvglglamvfiAYGMPLLAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTR 369
|
250 260 270
....*....|....*....|....*....|..
gi 237869122 342 TLLLARGLQTILPLMATWWFIANLANLALPPL 373
Cdd:PRK06521 370 DMEKLGGLIRRMPWTAWAFLIGCLAISALPPL 401
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
151-402 |
2.44e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 69.18 E-value: 2.44e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 151 LFYTLAGSLPLLVALLVTQKNTGTLSmLTMYYTQPLNLTmwaDNIWWLGCLMAFLV----KMPLYGVHLWLPKAhVEAPI 226
Cdd:PRK12647 152 LLVTGGGGLALLAGLILLGNVTGTYS-LSELLASGDVIR---EHPLYLAILLLVLGgaftKSAQFPFHFWLPNA-MEAPT 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 227 AGSMVL-AAVLLKLGGYGMMRimmmLDPLTKQLAYPFIILALWG---IIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGI 302
Cdd:PRK12647 227 PVSAYLhSATMVKAGIYLLAR----LNPVLGGTPLWQTILPLFGgltMLTGALLAVRQTDLKLILAYSTVSALGTLVMLL 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 303 LIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANLALPPLPNLMGELTI 382
Cdd:PRK12647 303 GLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELI 382
|
250 260
....*....|....*....|
gi 237869122 383 ITSMFNWSYPTIIITGLGTL 402
Cdd:PRK12647 383 YEALLEAPLWSLILTVAAVL 402
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
201-407 |
2.74e-12 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 68.64 E-value: 2.74e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 201 LMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLDPLT--KQLAYPFIILALWGIIMTGSICL 278
Cdd:PRK08377 213 IFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANgwSSVLKLVIIMATLTVFFAELSAL 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 279 RQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMAT 358
Cdd:PRK08377 293 RQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTAL 372
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 237869122 359 WWFIANLANLALPPLPNLMGELTIITSMFNWSYPTIIITGLG-TLITASY 407
Cdd:PRK08377 373 ALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGaSVVEAVY 422
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
57-409 |
3.06e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 68.44 E-value: 3.06e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 57 LATDQLSTPLLVLTCWLLPLMIIASQNHIYSEpvnRQRTYI-SLLISLQTFLIMAFGATEIIMFYIMFEATLIPTLIIIT 135
Cdd:PRK07691 73 FVADMFAALLVLTSSIITFLVILYSFQTIGIE---RERYYYyPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIV 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 136 RWGNQTERLNAGTYFLFYTLAGSLpLLVALLVTQKNTGTLSM--LTMYYTQPLNLTMWADNIWWLGCLMAFLVKMPLYGV 213
Cdd:PRK07691 150 IGGTKIQLRESIKYVLINVVSSAF-FVVAVAILYSVVGTLNMadISVKIAELSAGQTGLITVVAILFLFVFATKAGLFPL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 214 HLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLDPLTKQLAYPFI-ILALWGIIMTGSICLRQTDLKSLIAYSSV 292
Cdd:PRK07691 229 YFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLIlILALLTIIFGVIGAVAYFDIKKIIIYNIM 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 293 SHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANLALPP 372
Cdd:PRK07691 309 IAVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPP 388
|
330 340 350
....*....|....*....|....*....|....*..
gi 237869122 373 LPNLMGELTIITSMFNWSYPTIIITGLGTLITASYSL 409
Cdd:PRK07691 389 LSGFYGKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSV 425
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
157-399 |
3.79e-12 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 68.32 E-value: 3.79e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 157 GSLPLLVALLVTQKNTGTLSMLTM---YYTQPLNLTMWADNIWWLGCLMAFLvkmPLYGvhlWLPKAHVEAPIAGSMVLA 233
Cdd:PRK08042 146 GTLLLAIACWLLWQRYGTLDLRLLdmrMQQLPLGSDIWLLGVIGFGLLAGII---PLHG---WVPQAHANASAPAAALFS 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 234 AVLLKLGGYGMMRIMMMLDPLTKQLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLV-----AG--GILIQT 306
Cdd:PRK08042 220 TVVMKIGLLGILTLSLLGGNAPLWWGVALLVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIIllglgAGvtGIALEQ 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 307 P----WGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANLALPPLPNLMGELTI 382
Cdd:PRK08042 300 PaliaLGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVI 379
|
250
....*....|....*..
gi 237869122 383 ITSMFNWSYPTIIITGL 399
Cdd:PRK08042 380 YQSFFKLSNSGAFVARL 396
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
84-402 |
5.88e-12 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 67.31 E-value: 5.88e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 84 HIYSEPVNRQRTYISLLISLQTFLIMAfgaTEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFyTLAGSLPLLV 163
Cdd:PRK06525 106 HPVHEGTGRYYAFLLLFIGAMAGLVYS---STLLGLLLFFEITGLCSWALISYYQSPKALRSALKALLI-THIGSLGLYL 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 164 ALLVTQKNTGTLSMLTMYytqplNLTMWADNIWWLGCLMAFLVKMPLYGVHLWLPKAhVEAPIAGSMVL-AAVLLKLGGY 242
Cdd:PRK06525 182 AAATLFLQTGTFALSALS-----GLHGSLKYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVY 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 243 GMMRIMMMLDPLTKQLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQ---TPWGFTGALILMIA 319
Cdd:PRK06525 256 IFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAilgSRLALEGSIAYIFN 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 320 HGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMFNWSYPTIIITGL 399
Cdd:PRK06525 336 HAFAKSLFFLVAGALSYSCGTRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPA 415
|
...
gi 237869122 400 GTL 402
Cdd:PRK06525 416 MVL 418
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-413 |
6.82e-12 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 67.15 E-value: 6.82e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 52 SLNLHLATDQLSTPLLVLTCWLLPLM-IIASQNHIYSEPVNRQRTYISLLISLQTFLIMAfgaTEIIMFYIMFEATLIPT 130
Cdd:PRK06589 76 SIGLHLEPLGLIFLLLIGFLWICALLyTPKYLAINNIDSSSRFLFFFNLTILIGVLIALS---SDLFTMFVCYELLTIST 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 131 LIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLVTQKNTGTLSMltmyytQPLNLTMWADNIWWLGCLMAFLVKMPL 210
Cdd:PRK06589 153 AFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDF------VSGGLFSKNQSIILLLMFIYGIAKTAI 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 211 YGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMM---LDPLTKQLA--YPFIILALWGIIMTGSICLRQTDLKS 285
Cdd:PRK06589 227 FPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifgLSYLQRIFAefNWLIFIPIVSIFYSSLKALKTDNIKK 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 286 LIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANL 365
Cdd:PRK06589 307 ILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSL 386
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|
gi 237869122 366 ANLALPPLPNLMGELTIITSMFNWSYPT--IIITGLGTLITASYSLYMFL 413
Cdd:PRK06589 387 SLIGIPIFSGFISKFLILLAASEQNQPWlsIIVMLVVIASSILSALYLLK 436
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
91-449 |
2.36e-11 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 65.93 E-value: 2.36e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 91 NRQRTYISLLISLQTFLIMAFGATEIIMfYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLVTQK 170
Cdd:PRK12646 108 NLPRFYFYLTLFMFSMIGIVLSDNTILM-YVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGFIMLYI 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 171 NTGTlSMLTMYYTQPLNLTMWADNIWWLGCLM--AFlVKMPLYGVHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRI 247
Cdd:PRK12646 187 MTGT-NNITEILGQADHIKNHGLFIPMIFMFLlgAF-TKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRF 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 248 MMMLDpLTKQLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVA-----GGILIQTPWG---------FTGA 313
Cdd:PRK12646 264 TPLLG-LSNMYIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMamvgiGGGYAQHQQDaiasiyvfvLFAA 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 314 LILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMFNWS--- 390
Cdd:PRK12646 343 LFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALTQTGqls 422
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 237869122 391 ----YPTIIITGLG---TLITASYSLYMFLTTQRGPTTMHTISLTPSHtrEHLLMALHIIPVLLLI 449
Cdd:PRK12646 423 qfslISMIIIVFIGviaSIFTFTYALYMVKEVFWGKYDSKVFTKKNIH--EPWLFSLPSLILMVLV 486
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
172-372 |
1.93e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 62.83 E-value: 1.93e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 172 TGTLSMLTMY-YTQPLnltmWADNIWWLGCLMAFL---VKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRI 247
Cdd:PRK12662 187 TGTLNMGDMFlIIQDL----PTNRAIQIGVLFIMVglfIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRI 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 248 M-----MMLDPLTKQLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGL 322
Cdd:PRK12662 263 VydvfkANFVFTTLPFNNVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSI 342
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 237869122 323 VSSSLFCLANT---NYERTHSRTLLlarGLQTILPLMATWWFIANLANLALPP 372
Cdd:PRK12662 343 VKSALFMVSGSisyHFGTTKLEDCL---NLWKSMPKITLAFVLLSLSLIGMPP 392
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
76-373 |
1.62e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 60.23 E-value: 1.62e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 76 LMIIASQNHIYSEPVNRQRTYISLLISLQTFLIMAFGATEIIMFyIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTL 155
Cdd:PRK12649 94 VIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITA 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 156 AGSLPLLVALLVTQKNTGTLSMLTMYYTQPLNLTMWADNIWWLGCLMAFL------VKMPLYgvhLWLPKAhVEAPIAGS 229
Cdd:PRK12649 173 GGGLFMFAGFLLLHVITGTYDIATILQDSELIENIKGHPLFLITLILIFIgaaaksAQGPFY---IWLPNA-MEAPTPVS 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 230 MVL-AAVLLKLGGYGMMRImmmlDPLTKQLAYPFIILALWGII---MTGSICLRQTDLKSLIAYSSVS---HMGLVAGGI 302
Cdd:PRK12649 249 AFLhSATMVKAGVYLVARI----HPIFSGTEAWFILVSGTGMItmvLAGFLAFRQTDIKAILAYSTISqlaYLMTMYGYT 324
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 237869122 303 LIQTP-WGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANLALPPL 373
Cdd:PRK12649 325 TYHEPgLGVAAATFHLLNHATFKACLFLVAGIVAHEAATRDIRKLGGLRKEMPITFIVASIAALAMAGIPPL 396
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
214-415 |
8.97e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 57.47 E-value: 8.97e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 214 HLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRI--MMMLDPLTKQLaypFIILALWGIIMTGSICLRQTDLKSLIAYS 290
Cdd:COG1009 231 HFWLPDA-MEGPTPVSALLhAATMVKAGVYLLARLspLFALSPVWLTV---VAIIGAITALFAALIALAQTDIKRVLAYS 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 291 SVSHMGLVAGGILIQtpwGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLMATWWFIANLANLAL 370
Cdd:COG1009 307 TVSQLGYMFLALGVG---AYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALSLAGI 383
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 237869122 371 PPLPNLMGELTIITSMFNWSYPTIIITGLGTL---ITASYSLYMFLTT 415
Cdd:COG1009 384 PPFAGFFSKEAILEAALEAGGLGPLLLAVALLgafLTAFYSFRLFFLV 431
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
263-411 |
3.20e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 55.81 E-value: 3.20e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 263 IILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRT 342
Cdd:PRK06277 270 IALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKTSN 349
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 237869122 343 LLLARGLQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMFNWSYPTI----IITGLGTLIT---ASYSLYM 411
Cdd:PRK06277 350 LRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQAAMQANMPELaiimIIVSIGTFVSmmkAFYLIYL 425
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
138-403 |
1.81e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 53.32 E-value: 1.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 138 GNQTERLNAGTYFLFYTLAGSLPLLVALLVTQKNTGTLSMLTMYYTQPlnlTMWADNIWWL--GCLM---AFLVKMPLYG 212
Cdd:PRK12666 152 GSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTGTLNMADLAQRIA---QLPAADRALLeaGAALllvVFLIKAAMWP 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 213 VHLWLPKAHVEA--PIAGsmvLAAVLLKLGGYGMMRIMMMLDPLTKQLAYPFIILALWGI----IMTGSI-CLRQTDLKS 285
Cdd:PRK12666 229 LNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLFGPEAGASAGFGQDWLLPGglatLAFGAIgVLAAQRLRR 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 286 LIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLAN-----------------TNYERTHSRTLLLARG 348
Cdd:PRK12666 306 LAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALFLLADlverqrgaaadrlavtpELYDLDEEEEEEVGVA 385
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 237869122 349 LQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMFN--------WSYPTIIITGLGTLI 403
Cdd:PRK12666 386 IPATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLNppgagaawWLWALVLLSGLAALI 448
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
35-373 |
2.04e-07 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 53.42 E-value: 2.04e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 35 AALSLTWFKW-NSETGWTSLNLhlATDQLSTPLLVLTCWLLPLMIIASQNHIYSEP-VNRQRTYISLLislqTFLIMAFG 112
Cdd:MTH00032 55 AVVHIELYKWiESEIFITHIGL--LYDTLSVTMLLVISSISTLVHIYSTSYMSDDPhVPRFLCYLSLF----TFLMMVLV 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 113 ATE-IIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLVTQKNTGTLSMLTM----------- 180
Cdd:MTH00032 129 TSDnYLQLFIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggsvgsgimd 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 181 --YYTQPLNLTMWAD-NIWWLGCLMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMmmldPLTKQ 257
Cdd:MTH00032 209 rgYYGGGAYESPLAPfAIIGILLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSF----PLFEK 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 258 LAYPFIILALWGII---MTGSICLRQTDLKSLIAYSSVSHMGLVAggILIQTPWGFTGALILMIAHGLVSSSLFCLA--- 331
Cdd:MTH00032 285 APLTLLIITIFGALtafFAATVGLVQNDLKKVIAYSTCSQLGYMV--LIIGIEGSHNVGLFHLVNHAFFKALLFLSAgsv 362
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 237869122 332 --NTNYERTHSRTLllaRGLQTILPLMATWWFIANLANLALPPL 373
Cdd:MTH00032 363 ihSTTVDEQDMRKM---GGLIHSIPFTYTMMLIGSFSIMGLPYL 403
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
214-328 |
3.70e-07 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 52.13 E-value: 3.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 214 HLWLPKAHVEAPIAGSMVLAAVLlKLGGYGM-MRIMMM-LDPLTKQLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSS 291
Cdd:PRK05777 224 HMWTPDVYEGAPTPVTAFLATAP-KIAAFAVlLRLLVVaFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSS 302
|
90 100 110
....*....|....*....|....*....|....*..
gi 237869122 292 VSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLF 328
Cdd:PRK05777 303 IAHAGYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAF 339
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
76-456 |
4.03e-07 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 52.26 E-value: 4.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 76 LMIIASQNHIYSEPVNRQRTYISLLISLQTFLIMAFgATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAG-TYFLFYT 154
Cdd:TIGR01770 85 LTFFFALSYLSKEKINKFEFYILLLFALLGIFLLVS-SNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGlKYFILGA 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 155 LAGSLPLL-VALLVTQKNTGTLSMLTMYYTQpLNLTMWADNIWWLGCLMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLA 233
Cdd:TIGR01770 164 FSSGLLLFgISLIYGFTGSLNFEDLLLFLSN-GMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFS 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 234 AVLLKLGGYGMMRIMM-MLDPLTKQLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTG 312
Cdd:TIGR01770 243 IVPKIAIFAVFLRLFLyILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKA 322
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 313 ALILMIAHGLVS----SSLFCLANTNYERTHSRTLLlaRGLQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMFN 388
Cdd:TIGR01770 323 VLFYIFIYALMSlgafGVLSLLRSYKDEWIEYISDF--AGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLK 400
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 237869122 389 WSYPTIIITG-LGTLITASYSL----YMFLTTQRgpttmHTISLTPSHTREHLLMALHIIPVLLLIAKPELLW 456
Cdd:TIGR01770 401 SGLYWLAVIAvLTSVIGAFYYLrvvkVMYFDKPE-----RRIPSNPQSKAQSLLLSISALFILFLGLFPSLIL 468
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
113-410 |
4.64e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 49.15 E-value: 4.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 113 ATEIIMFYIMFEATLIPTLIIItrwGNQTERLN---AGTYFLFYTLAGSLPLLVALLVTQKNTGTLSMLTMYYTQPlnlT 189
Cdd:PRK12644 125 SDNLLLLYVFWELTTVLSFLLI---GHYAERAAsrrAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLADPP---T 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 190 MWADNIWWLGCLMAFLVKMPLYGVHLWLPKAhVEAPIAGSMVL-AAVLLKLGGYgmmrimmmldpLTKQLAYPF------ 262
Cdd:PRK12644 199 GPAVSVAVVLILVGALSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIY-----------LVARLAPGFadvpvw 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 263 ----IILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERT 338
Cdd:PRK12644 267 rptvLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHST 346
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 237869122 339 HSRTLLLARGLQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMFNWSYP----TIIITG--LGTLITASYSLY 410
Cdd:PRK12644 347 GTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEAVLHDGALgpagPVVLAGivLGSILTVAYSLR 424
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
99-455 |
7.32e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 48.04 E-value: 7.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 99 LLISLQTFLIMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLvtqkntgtlsml 178
Cdd:MTH00200 9 FILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLL------------ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 179 TMYYTQPLNLTMWADNIWWLGCLMAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLlKLGGygmmrIMMMLDPLTKQL 258
Cdd:MTH00200 77 NAWTSGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQ-KLAP-----FALLIQLAPALN 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 259 AYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGIliqtPWGFTGALILMIAHGLVSSSLFCLANTNyert 338
Cdd:MTH00200 151 SNILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGL----VYSPNLALLYLLLYVIITLTVFLLLNLL---- 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 339 HSRTLLLARGLQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMFNWSYPTI-IITGLGTLITASYSL---YMFLT 414
Cdd:MTH00200 223 NSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYaTILLLGSLLSLFFYLrlsYLTLL 302
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 237869122 415 TQRGPTTMHTISLTPSHTREHLLMALHIIPVLLLIAKPELL 455
Cdd:MTH00200 303 TLSPNQINMMSSWRTKSNSNLLVGLLLLLSILGLPLTPQLL 343
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
197-418 |
1.21e-05 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 47.71 E-value: 1.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 197 WLGCLMAFLVKM---------PLygvHLWLPKAhVEAPI-------AGSMVLAAVLLklggygmmriMMMLDPLTKQLAY 260
Cdd:PRK07376 224 WLALLLCILVFLgpmaksaqfPL---HVWLPDA-MEGPTpisalihAATMVAAGVFL----------VARMYPVFEQFPA 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 261 PFIILALWGII---MTGSICLRQTDLKSLIAYSSVSHMG--LVAGGIliqtpWGFTGALILMIAHGLVSSSLFCLANT-- 333
Cdd:PRK07376 290 VMTVIAWTGAItafLGASIALTQNDIKKGLAYSTISQLGymVMAMGC-----GAYSAGLFHLMTHAYFKAMLFLGSGSvi 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 334 -------NYERTHSRTLLLARGLQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMFNwSYPTIIITGLGTL-ITA 405
Cdd:PRK07376 365 hgmeevvGHDPVLAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFE-ANPALWFVGFLTAgMTA 443
|
250
....*....|...
gi 237869122 406 SYSLYMFLTTQRG 418
Cdd:PRK07376 444 FYMFRMYFLTFEG 456
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
214-419 |
6.55e-05 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 45.30 E-value: 6.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 214 HLWLPKAhVEAPIAGSMVL-AAVLLKLGGYGMMRimmmLDPLTKQLAYPFIILALWGIIMT--GSI-CLRQTDLKSLIAY 289
Cdd:PRK12645 230 YIWLPDA-MEAPTPVSAYLhSATMVKAGIYLVAR----FTPIFAGSQVWFWTVTLVGLITLfwGSLnAVKQTDLKGILAF 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 290 SSVSHMGLV-----AGGILIQTPWG--------FTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLARGLQTILPLM 356
Cdd:PRK12645 305 STVSQLGLImsllgIGAASLHYQGDdskiyaaaITAAIFHLINHATFKGSLFMIVGIVDHETGTRDIRKLGGLMTIMPIT 384
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 237869122 357 ATWWFIANLANLALPPLPNLMGELTIITSMFN-----------WSYPTIIITGLGTLITASYSLYMFLTTQRGP 419
Cdd:PRK12645 385 FTIALIGALSMAGLPPFNGFLSKEMFFESMLNateanlfsldtWGVLFPVIAWVASVFTFVYSIIFIFKTFFGK 458
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
202-406 |
1.23e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 44.40 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 202 MAFLVKMPLYGVHL--WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRiMMMLDPLTKQLAYPFIILALWGI-IMTGSICL 278
Cdd:PRK06459 166 FGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMGVYGILK-MTILTQTIPIGYFGLTILAIGAFsILFGALYA 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 279 RQTD-LKSLIAYSSVSHMG--LVAGGILIQTPWGFT--------GALILMIAHGLVSSSLFCLANTnyerTHSRTLLLAR 347
Cdd:PRK06459 245 YVSEnVKGLLAFSTIENNGaiLVALGLYMVTKQLITsiehfsliTVILYSFAHSVAKTGLFLSSGL----QEKQSITYSK 320
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 237869122 348 GLQTILPLMATWWFIANLAnlALPPLPNLMGELTIITSMFNWSYPTIIITGLGTLITAS 406
Cdd:PRK06459 321 KIRNRWIELGLTLLASSLS--GLLPNIGGVASWLLLESLFMFAYVLHNVISILFIVTGA 377
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
100-399 |
1.99e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 43.48 E-value: 1.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 100 LISLQTFLIMafGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAG-TYFLFYTLAGSLPLL-VALLVTQKNTGTLSM 177
Cdd:MTH00196 1 MVALGILCLI--SSSNWLSVYLAIELQTLSLFILIAQNRGSGYSAEAGlKYFVLGALSSGLFLFgCALLCGTTGGLHLSY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 178 LTMYYTQPLNLTMWADNIWWLGCLMAFLVKMPLYGVHLWLPKAHVEAPiagsMVLAAVLLKLGGYGMMRIMMMLDPLTKQ 257
Cdd:MTH00196 79 INLVLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAP----TKTTALLAIVPKLGIFSILVSIGLNVNI 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 258 LaypfIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHglVSSSLFCLANTNYER 337
Cdd:MTH00196 155 L----LIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIY--IIMSICVFSIILALN 228
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 237869122 338 THSRTLLLARGLQTILPLMATWWFIANLANLALPPLPNLMGELTIITSMFNWSYPTIIITGL 399
Cdd:MTH00196 229 VYKNLIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAV 290
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
161-403 |
2.07e-04 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 43.53 E-value: 2.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 161 LLVALLVTQKNTGTLSMLTMYYTQPLNLTMWADNIWWLGCLMAFLVKMPLYGVHLWLPKAhVEAPIAGSMVLAAVLLKLG 240
Cdd:PRK08168 167 LLAAAALAYLEVGSLSLSALWAHLAAQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQV-MEAPTPVSALLHAGVVNLG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 241 GYGMMRIMmmldPLTKQLAYPFIILALWGIIMT---GSICLRQTDLKSLIAYSSVSHMGLvaggILIQTPWG-FTGALIL 316
Cdd:PRK08168 246 GFVLIRFA----PLLEQAPPARWLLVLVGLATAvlaGLVMLTRISIKVRLAWSTVAQMGF----MLLECGLGlYELALLH 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 317 MIAHGLVSSSLFCLANTNYERTHSRTL-----------LLARGLQTILPLMA--TWWFIANLANLALPPLPNLMGELTII 383
Cdd:PRK08168 318 LVAHSLYKAHAFLSASEAVRDTRLRRLqgpqsaagvvsLLLAPLLSAALVLLlqSLLPLGAWPWWWSAVLALAWAPLLWQ 397
|
250 260
....*....|....*....|
gi 237869122 384 TSMFNWSYPTIIITGLGTLI 403
Cdd:PRK08168 398 PCASGASTLSGLGLGLLLVA 417
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
108-430 |
4.96e-04 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 42.07 E-value: 4.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 108 IMAFGATEIIMFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLvallvtqkntgtlSMLTMYYTQPLn 187
Cdd:MTH00011 20 LMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLL-------------GMTMMWSFPSL- 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 188 ltmwADNIWWLGCLMAFLVKMPLYGVHLWLPkaHVEAPIAGSMVLAavllkLGGYGMMRIMMMLDPLTKQLAYPFII-LA 266
Cdd:MTH00011 86 ----LKNITALMLLVSLMLKLGMAPCHFWFP--SVMSSISWTLCLI-----LSTWQKIAPLSILFFFTSHNILPMMTsMA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 267 LWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAggiLIQTPWGFTGALILMIAHGLVSSSLFCLANTNYERTHSRTLLLA 346
Cdd:MTH00011 155 AMSALAGGLGGMNQTQLRPLLAYSSIGHMGWMT---MISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISS 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 347 RGLQTILplmatWWFIANLANLALPPLPNLMGELTIITSMFNWSYPTIIITGL-GTLITASYSLYMFLTTQRGPTTMHTI 425
Cdd:MTH00011 232 MSQTTSM-----SLFIMLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIvGSLMNLFYYLNLIFNFMYLSPTFSSL 306
|
....*
gi 237869122 426 SLTPS 430
Cdd:MTH00011 307 KSAPY 311
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
73-409 |
1.78e-03 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 40.83 E-value: 1.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 73 LLPLMIIASQNHIYS------EP-VNRQRTYISLLISLQTFLIMAfgaTEIIMFYIMFEATLIPTLIIITRWGNQTERLN 145
Cdd:MTH00020 86 LLVVTTVSTLVHIFStaymrgDPhIPRFMSYLSLFTFLMVVLVTS---DNYLQLFIGWEGVGLCSYLLINFWLTRIEANK 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 146 AGTYFLFYTLAGSLPLLVALLVTQKNTGTLSMLTMYYTQPLNLTmwaDNIWWLgCLMAFLV---KMPLYGVHLWLPKAH- 221
Cdd:MTH00020 163 AAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMVVSAPS---SDITLI-CLFLFIGavgKSAQLGLHTWLPDAMe 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 222 ----VEAPI-AGSMVLAAVLLklggygmmriMMMLDPLTKQLAYPFIILALWG---IIMTGSICLRQTDLKSLIAYSSVS 293
Cdd:MTH00020 239 gptpVSALIhAATMVTAGVFL----------LIRSSPLFEQAPLALIIVTIVGsltVFFAATVGLVQNDLKKVIAYSTCS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 294 HMG--LVAGGIliqtpWGFTGALILMIAHGLVSSSLFCLANTN-YERTHSRTLLLARGLQTILPLMATWWFIANLANLAL 370
Cdd:MTH00020 309 QLGymVVACGL-----SHYSISLFHLMNHAFFKALLFLSAGSViHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGF 383
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 237869122 371 PPLPNLMGELTIITSMFNWSYPTII--ITGLGTLITASYSL 409
Cdd:MTH00020 384 PYLTGFYSKDLILELAFGQYYLIFAywLGCFSALLTAFYSI 424
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
190-413 |
2.71e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 39.87 E-value: 2.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 190 MWADNIWWLGCLM--AFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLlKLGGYGMMrimMMLDPLTkQLAYPFIILAL 267
Cdd:MTH00144 78 YNLSFSWFSMSLLllGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLL---SNFLDLY-WLAYLLCVISV 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 268 WGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILiqtpWGFTGALILMIAHGLVSSSLFCLANTnyerthSRTLLLAR 347
Cdd:MTH00144 153 LSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAIL----HGSWLMWMYFLIYIVSSGFLFFSLWS------GDSGSMKD 222
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 237869122 348 GLQTILPLMATWWFIANLANLA-LPPLPNLMGELTIITSMFNWSYPTIIITG-LGTLITASYSLYMFL 413
Cdd:MTH00144 223 LGSLKPSYKTGLSIISLLLSLGgLPPFLGFCSKLLVLISSMESSPLLLILLLlLGSLISLFFYLSVFF 290
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
216-443 |
3.28e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 39.75 E-value: 3.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 216 WLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRIMMMLDPlTKQLAYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHM 295
Cdd:MTH00207 201 WLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSS-TYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQL 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 237869122 296 GLVAGGILIQTPwgfTGALILMIAHGLVSSSLFCLANTN-YERTHSRTLLLARGLQTILPLMATWWFIANLANLALPPLP 374
Cdd:MTH00207 280 GVMMASLGLGMP---KLALFHLITHALFKALLFVCAGSLiHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLS 356
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 237869122 375 NLMGELTIITS--MFNWSYPTIIITGLGTLITASYSLYMFLTTQRGPTT----MHTISLTPSHTREHLLMALHII 443
Cdd:MTH00207 357 GFYSKDLILESslFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSsspyHHLEDEDKSLTTPMLLLTLGAI 431
|
|
| |
