|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
189-1295 |
0e+00 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 987.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 189 PAPSGDGARRPPPPGSRPALPPGDRVLQYLESVREAALARTLEAPDGgapspspRAPPPAALGGPPPPSGASKRKRSRPV 268
Cdd:PHA03307 289 SSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSES-------SRGAAVSPGPSPSRSPSPSRPPPPAD 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 269 PAFLQAAPRTPSPPADRSSPQRRRSPPQPSSPPLPQQPQRRRRESSGAGRPSGPGPDAAREPAAGPA-EPLLTPAGDPWP 347
Cdd:PHA03307 362 PSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYArYPLLTPSGEPWP 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 348 GSDPPPKGRVRYGGTGDSREGLWDDPEILLAAERYEAAGGPVPVYVPEMGDSGKQYRALVRLIFENQ-DAMSWLQNSKLS 426
Cdd:PHA03307 442 GSPPPPPGRVRYGGLGDSRPGLWDAPEVREAAARYEASPGPVPVYVPEMGDSAKQYAALVRLLYTPDrEAMGWLQNPKLT 521
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 427 GPEHNLAQFCQKFIHAPRGHGSFITGSVANPLPHVGDAMARGDALWALPHAAASVAMSRRYDRTQKMFILQSLRRAYSDM 506
Cdd:PHA03307 522 GPDQALDQFCQKKFQAPRGSGSFITGSVARPVPHIGDAMAAGNALWALPHAAAAVAMSRRYDRAQKGFLLQSLRRAYAPM 601
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 507 AFPRPEGEgapaaepgsppgpgpaapsprHDASSSSPTAGAPRSPPqararvrdayarvcaalgarrapgepgepgAARR 586
Cdd:PHA03307 602 AYPENAAD---------------------TGAGAAAPAPAAPRPDA------------------------------AAAG 630
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 587 HPGGARVKELGDACVLACHAALEALLRLRGGAAAVPGLqpgELPTPACPPEALCGNPGGLRAAAAAIYELRDLVERARLL 666
Cdd:PHA03307 631 GASARPLRELADACVLACRAVLEALLEGPDGLSAVPGL---AFPRPACPPRALEACPARLESWLRELRDLRDAVYLARLR 707
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 667 GpqDPGARLGDDDLRLAVRAVLVTARTVAPLVRYNPESARARASAWTLTRAALSIPSLAARQMAEAVAAL--------PG 738
Cdd:PHA03307 708 G--DLPVAGGREERVAAVRAVSLVARTVAPLVRYSPRRARARASAWDITDALFSNPSLVPAKLAEALALLepaepqrgAG 785
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 739 APRPREAAEEGEADHLPPLWAHPPQPQPPGPPSPAAHRAPSPGRGPAPAAPCASPAAARGLPEASEAASPRCLGRLPERR 818
Cdd:PHA03307 786 SSPPVRAEAAFRRPGRLRRSGPAADAASRTASKRKSRSHTPDGGSESSGPARPPGAAARPPPARSSESSKSKPAAAGGRA 865
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 819 PRQRGKRRSEPPRPDEGTDDSEERAGAATPP---APKRRPGAPPPRALGPMPAGGPDPRGGFRRVPRGESHTPAPGEAAR 895
Cdd:PHA03307 866 RGKNGRRRPRPPEPRARPGAAAPPKAAAAAPpagAPAPRPRPAPRVKLGPMPPGGPDPRGGFRRVPPGDLHTPAPSAAAL 945
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 896 AAYCSPETVAELVDHPLFPEAWRPALTFDPAALATVAARRTGPPAREGARFGALAPSGPLRRRAAWMRQVPDPEDVRIVV 975
Cdd:PHA03307 946 AAYCPPEVVAELVDHPLFPEPWRPALAFDPEALAEIAARCGGPPPRSGSAFGPLRASGPLRRRAAWMRQIPDPEDVRVVV 1025
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 976 LYHPLPGEDllgGLPAGGAAGREGGPRWSERKGGLSALLAALGNRLLTRGSHCWAGNWTGPPDVSALNRQGVLLLSTGDL 1055
Cdd:PHA03307 1026 LYSPLPGEH---LFGVPAPDASPGGPAWSPERGGLSFLLAALGNRLCLPDSHAWAGNWTGAPDVSALNAQGVLLLSTRDL 1102
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 1056 AFAGCVEYLCLRLGSARRRLIVLDAVDPEDWPADGPAVGQYHLYMRARLTPRAACAVRWPAERDLSRAVLTSGSVFGPVF 1135
Cdd:PHA03307 1103 AFAGAVEYLCLRLGSARRRLIVLDTVDPEDWPADGPAVSQYHVYLRCAVLPRAQCAVRWPAARDLARAVLTSSRVFGPGL 1182
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 1136 FARVEAAFARLHPGLEAPRLCRAGNVAYVVETRAGERTRVPMPPRDYRQRVLPVYDGCKDMGAQSRGLAVFDPDFDEGAA 1215
Cdd:PHA03307 1183 FARVEAAFARLYPDAPPLRLCRGANVRYTVRTRLGPRTRVPLPPREYRQAVLPALDGCKDMAAQAEGLGLGAPDFLEGEA 1262
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 1216 RSHRAANRWGLGAPLRPLYLAAGRRGAldesAAPADLLPPALREFCRVALLEPDLEAGPTVLRVG---EELPARAPHVEW 1292
Cdd:PHA03307 1263 HSHRAANRWGLGAPLRPVYLAEGRRAA----IAGPDELPAVVRAFCRAALLEPDPEAPPLVLPPSaaaEAAHARAPRVTW 1338
|
...
gi 675510769 1293 EPG 1295
Cdd:PHA03307 1339 AKS 1341
|
|
| Herpes_ICP4_C |
pfam03585 |
Herpesvirus ICP4-like protein C-terminal region; The immediate-early protein ICP4 ... |
875-1301 |
2.18e-146 |
|
Herpesvirus ICP4-like protein C-terminal region; The immediate-early protein ICP4 (infected-cell polypeptide 4) is required for efficient transcription of early and late viral genes and is thus essential for productive infection. ICP4 is a large phosphoprotein that binds DNA in a sequence specific manner as a homodimer. ICP4 represses transcription from LAT, ICP4 and ORF-P that have high-affinity a ICP4 binding site that spans the transcription initiation site. ICP4 proteins have two highly conserved regions, this family contains the C-terminal region that probably acts as an enhancer for the N-terminal region.
Pssm-ID: 281570 Cd Length: 444 Bit Score: 452.53 E-value: 2.18e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 875 GGFRRVPRGESHTPAPGEAARAAYCSPETVAELVDHPLFPEAWRPALTFDPAALATVAARRTGP-------------PAR 941
Cdd:pfam03585 1 GGFRRFPVGTVHTQTPPQSALNAYCPPGAFAELVDFPLFPEPWRPALRFDPEALADIAARVANAlpgggdynsneiiTSA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 942 EGARFGALAPSGPLRRRAAWMRQVPDPEDVRIVVLYHPLPGEDLLGGLPAGGAagreggPRWSERKGGLSALLAALGNRL 1021
Cdd:pfam03585 81 ASRAFGPPTATSKLRRRTAWMRQIPDPEDVRIVVLYSPLPGEDLFCVPAPDTP------PKWSNKRGGLSFLLAALSNRL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 1022 LTRGSHCWAGNWTGPPDVSALNRQGVLLLSTGDLAFAGCVEYLCLRLGSARRRLIVLDAVDPEDWPADGPAVGQYHLYMR 1101
Cdd:pfam03585 155 CLPKTSAWAGNWTGAPDVSALTAMGVLLLSTRDLAFAGAVEYLGRQCMKRKRRLIVMDTVEDRYWPPDGPAISEEHTYMK 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 1102 ARLTPRAACAVRWPAERDLSRAVLTSGSVFGPVFFARVEAAFARLHPGLEAPRLCRAGNVAYVVETRAGERTRVPMPPRD 1181
Cdd:pfam03585 235 CIISPRSQCCVRWPGLLDLGRTVIASRRVFGPLTFARLEQAYAELYPEDSPLNLCRGGNVRYTVETRLGPVTCVPTSPRE 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 1182 YRQRVLPVYDGCKDMGAQSRGLAVFDPDFDEGAARSHRAANRWGLGAPLRPLYLAAGRRGALdesAAPADLLPPALREFC 1261
Cdd:pfam03585 315 YRAAVLPVFDGCKDLARQSRGLGLGAPDFLCEEAHSHRAARRWGLGAPLRPVYVIEGRMNAI---AGPSFLHVPTARNFC 391
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 675510769 1262 RVALLEPDLEAGPTVLRVGEELPARA------------PHVEWEPGFGARST 1301
Cdd:pfam03585 392 RSALLEPDPEARPLVLHIPEGTCSALaedmvasalppcPRITWGQGFGHEEG 443
|
|
| PksD |
COG3321 |
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ... |
734-1269 |
1.24e-07 |
|
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442550 [Multi-domain] Cd Length: 1386 Bit Score: 56.42 E-value: 1.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 734 AALPGAPRPREAAEEGEADHLPPLWAHPPQPQPPGPPSPAAHRAPSPGRGPAPAAPCASPAAARGLPEASEAASPRCLGR 813
Cdd:COG3321 861 VPLPTYPFQREDAAAALLAAALAAALAAAAALGALLLAALAAALAAALLALAAAAAAALALAAAALAALLALVALAAAAA 940
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 814 LPERRPRQRGKRRSEPPRPDEGTDDSEERAGAATPPAPKRRPGAPPPRALGPMPAGGPDPRGGfrrvprgeshTPAPGEA 893
Cdd:COG3321 941 ALLALAAAAAAAAAALAAAEAGALLLLAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAALA----------LLAAAAL 1010
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 894 ARAAYCSPETVAELVDHPLFPEAWRPALTFDPAALATVAARRTGPPAREGARFGALAPSGPLRRRAAWMRQVPDPEDVRI 973
Cdd:COG3321 1011 LLAAAAAAAALLALAALLAAAAAALAAAAAAAAAAAALAALAAAAAAAAALALALAALLLLAALAELALAAAALALAAAL 1090
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 974 VVLYHPLPGEDLLGGLPAGGAAGREGGPRWSERKGGLSALLAALGNRLLTRGSHCWAGNWTGPPDVSALNRQGVLLLSTG 1053
Cdd:COG3321 1091 AAAALALALAALAAALLLLALLAALALAAAAAALLALAALLAAAAAAAALAAAAAAAAALALAAAAAALAAALAAALLAA 1170
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 1054 DLAFAGCVEYLCLRLGSARRRLIVLDAVDPEDWPADGPAVGQYHLYMRARLTPRAACAVRWPAERDLSRAVLTSGSVFGP 1133
Cdd:COG3321 1171 AALLLALALALAAALAAALAGLAALLLAALLAALLAALLALALAALAAAAAALLAAAAAAAALALLALAAAAAAVAALAA 1250
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 1134 VFFARVEAAFARLHPGLEAPRLCRAGNVAYVVETRAGERTRVPMPPRDYRQRVLPVYDGCKDMGAQSRGLAVFDPDFDEG 1213
Cdd:COG3321 1251 AAAALLAALAALALLAAAAGLAALAAAAAAAAAALALAAAAAAAAAALAALLAAAAAAAAAAAAAAAAAALAAALLAAAL 1330
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 675510769 1214 AARSHRAANRWGLGAPLRPLYLAAGRRGALDESAAPADLLPPALREFCRVALLEPD 1269
Cdd:COG3321 1331 AALAAAVAAALALAAAAAAAAAAAAAAAAAAALAAAAGAAAAAAALALAALAAAVA 1386
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
189-1295 |
0e+00 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 987.75 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 189 PAPSGDGARRPPPPGSRPALPPGDRVLQYLESVREAALARTLEAPDGgapspspRAPPPAALGGPPPPSGASKRKRSRPV 268
Cdd:PHA03307 289 SSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSES-------SRGAAVSPGPSPSRSPSPSRPPPPAD 361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 269 PAFLQAAPRTPSPPADRSSPQRRRSPPQPSSPPLPQQPQRRRRESSGAGRPSGPGPDAAREPAAGPA-EPLLTPAGDPWP 347
Cdd:PHA03307 362 PSSPRKRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASGAFYArYPLLTPSGEPWP 441
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 348 GSDPPPKGRVRYGGTGDSREGLWDDPEILLAAERYEAAGGPVPVYVPEMGDSGKQYRALVRLIFENQ-DAMSWLQNSKLS 426
Cdd:PHA03307 442 GSPPPPPGRVRYGGLGDSRPGLWDAPEVREAAARYEASPGPVPVYVPEMGDSAKQYAALVRLLYTPDrEAMGWLQNPKLT 521
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 427 GPEHNLAQFCQKFIHAPRGHGSFITGSVANPLPHVGDAMARGDALWALPHAAASVAMSRRYDRTQKMFILQSLRRAYSDM 506
Cdd:PHA03307 522 GPDQALDQFCQKKFQAPRGSGSFITGSVARPVPHIGDAMAAGNALWALPHAAAAVAMSRRYDRAQKGFLLQSLRRAYAPM 601
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 507 AFPRPEGEgapaaepgsppgpgpaapsprHDASSSSPTAGAPRSPPqararvrdayarvcaalgarrapgepgepgAARR 586
Cdd:PHA03307 602 AYPENAAD---------------------TGAGAAAPAPAAPRPDA------------------------------AAAG 630
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 587 HPGGARVKELGDACVLACHAALEALLRLRGGAAAVPGLqpgELPTPACPPEALCGNPGGLRAAAAAIYELRDLVERARLL 666
Cdd:PHA03307 631 GASARPLRELADACVLACRAVLEALLEGPDGLSAVPGL---AFPRPACPPRALEACPARLESWLRELRDLRDAVYLARLR 707
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 667 GpqDPGARLGDDDLRLAVRAVLVTARTVAPLVRYNPESARARASAWTLTRAALSIPSLAARQMAEAVAAL--------PG 738
Cdd:PHA03307 708 G--DLPVAGGREERVAAVRAVSLVARTVAPLVRYSPRRARARASAWDITDALFSNPSLVPAKLAEALALLepaepqrgAG 785
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 739 APRPREAAEEGEADHLPPLWAHPPQPQPPGPPSPAAHRAPSPGRGPAPAAPCASPAAARGLPEASEAASPRCLGRLPERR 818
Cdd:PHA03307 786 SSPPVRAEAAFRRPGRLRRSGPAADAASRTASKRKSRSHTPDGGSESSGPARPPGAAARPPPARSSESSKSKPAAAGGRA 865
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 819 PRQRGKRRSEPPRPDEGTDDSEERAGAATPP---APKRRPGAPPPRALGPMPAGGPDPRGGFRRVPRGESHTPAPGEAAR 895
Cdd:PHA03307 866 RGKNGRRRPRPPEPRARPGAAAPPKAAAAAPpagAPAPRPRPAPRVKLGPMPPGGPDPRGGFRRVPPGDLHTPAPSAAAL 945
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 896 AAYCSPETVAELVDHPLFPEAWRPALTFDPAALATVAARRTGPPAREGARFGALAPSGPLRRRAAWMRQVPDPEDVRIVV 975
Cdd:PHA03307 946 AAYCPPEVVAELVDHPLFPEPWRPALAFDPEALAEIAARCGGPPPRSGSAFGPLRASGPLRRRAAWMRQIPDPEDVRVVV 1025
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 976 LYHPLPGEDllgGLPAGGAAGREGGPRWSERKGGLSALLAALGNRLLTRGSHCWAGNWTGPPDVSALNRQGVLLLSTGDL 1055
Cdd:PHA03307 1026 LYSPLPGEH---LFGVPAPDASPGGPAWSPERGGLSFLLAALGNRLCLPDSHAWAGNWTGAPDVSALNAQGVLLLSTRDL 1102
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 1056 AFAGCVEYLCLRLGSARRRLIVLDAVDPEDWPADGPAVGQYHLYMRARLTPRAACAVRWPAERDLSRAVLTSGSVFGPVF 1135
Cdd:PHA03307 1103 AFAGAVEYLCLRLGSARRRLIVLDTVDPEDWPADGPAVSQYHVYLRCAVLPRAQCAVRWPAARDLARAVLTSSRVFGPGL 1182
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 1136 FARVEAAFARLHPGLEAPRLCRAGNVAYVVETRAGERTRVPMPPRDYRQRVLPVYDGCKDMGAQSRGLAVFDPDFDEGAA 1215
Cdd:PHA03307 1183 FARVEAAFARLYPDAPPLRLCRGANVRYTVRTRLGPRTRVPLPPREYRQAVLPALDGCKDMAAQAEGLGLGAPDFLEGEA 1262
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 1216 RSHRAANRWGLGAPLRPLYLAAGRRGAldesAAPADLLPPALREFCRVALLEPDLEAGPTVLRVG---EELPARAPHVEW 1292
Cdd:PHA03307 1263 HSHRAANRWGLGAPLRPVYLAEGRRAA----IAGPDELPAVVRAFCRAALLEPDPEAPPLVLPPSaaaEAAHARAPRVTW 1338
|
...
gi 675510769 1293 EPG 1295
Cdd:PHA03307 1339 AKS 1341
|
|
| Herpes_ICP4_C |
pfam03585 |
Herpesvirus ICP4-like protein C-terminal region; The immediate-early protein ICP4 ... |
875-1301 |
2.18e-146 |
|
Herpesvirus ICP4-like protein C-terminal region; The immediate-early protein ICP4 (infected-cell polypeptide 4) is required for efficient transcription of early and late viral genes and is thus essential for productive infection. ICP4 is a large phosphoprotein that binds DNA in a sequence specific manner as a homodimer. ICP4 represses transcription from LAT, ICP4 and ORF-P that have high-affinity a ICP4 binding site that spans the transcription initiation site. ICP4 proteins have two highly conserved regions, this family contains the C-terminal region that probably acts as an enhancer for the N-terminal region.
Pssm-ID: 281570 Cd Length: 444 Bit Score: 452.53 E-value: 2.18e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 875 GGFRRVPRGESHTPAPGEAARAAYCSPETVAELVDHPLFPEAWRPALTFDPAALATVAARRTGP-------------PAR 941
Cdd:pfam03585 1 GGFRRFPVGTVHTQTPPQSALNAYCPPGAFAELVDFPLFPEPWRPALRFDPEALADIAARVANAlpgggdynsneiiTSA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 942 EGARFGALAPSGPLRRRAAWMRQVPDPEDVRIVVLYHPLPGEDLLGGLPAGGAagreggPRWSERKGGLSALLAALGNRL 1021
Cdd:pfam03585 81 ASRAFGPPTATSKLRRRTAWMRQIPDPEDVRIVVLYSPLPGEDLFCVPAPDTP------PKWSNKRGGLSFLLAALSNRL 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 1022 LTRGSHCWAGNWTGPPDVSALNRQGVLLLSTGDLAFAGCVEYLCLRLGSARRRLIVLDAVDPEDWPADGPAVGQYHLYMR 1101
Cdd:pfam03585 155 CLPKTSAWAGNWTGAPDVSALTAMGVLLLSTRDLAFAGAVEYLGRQCMKRKRRLIVMDTVEDRYWPPDGPAISEEHTYMK 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 1102 ARLTPRAACAVRWPAERDLSRAVLTSGSVFGPVFFARVEAAFARLHPGLEAPRLCRAGNVAYVVETRAGERTRVPMPPRD 1181
Cdd:pfam03585 235 CIISPRSQCCVRWPGLLDLGRTVIASRRVFGPLTFARLEQAYAELYPEDSPLNLCRGGNVRYTVETRLGPVTCVPTSPRE 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 1182 YRQRVLPVYDGCKDMGAQSRGLAVFDPDFDEGAARSHRAANRWGLGAPLRPLYLAAGRRGALdesAAPADLLPPALREFC 1261
Cdd:pfam03585 315 YRAAVLPVFDGCKDLARQSRGLGLGAPDFLCEEAHSHRAARRWGLGAPLRPVYVIEGRMNAI---AGPSFLHVPTARNFC 391
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 675510769 1262 RVALLEPDLEAGPTVLRVGEELPARA------------PHVEWEPGFGARST 1301
Cdd:pfam03585 392 RSALLEPDPEARPLVLHIPEGTCSALaedmvasalppcPRITWGQGFGHEEG 443
|
|
| Herpes_ICP4_N |
pfam03584 |
Herpesvirus ICP4-like protein N-terminal region; The immediate-early protein ICP4 ... |
351-509 |
1.34e-61 |
|
Herpesvirus ICP4-like protein N-terminal region; The immediate-early protein ICP4 (infected-cell polypeptide 4) is required for efficient transcription of early and late viral genes and is thus essential for productive infection. ICP4 is a large phosphoprotein that binds DNA in a sequence specific manner as a homodimer. ICP4 represses transcription from LAT, ICP4 and ORF-P that have high-affinity a ICP4 binding site that spans the transcription initiation site. ICP4 proteins have two highly conserved regions, this family contains the N-terminal region that contains sites for DNA binding and homodimerization.
Pssm-ID: 367571 [Multi-domain] Cd Length: 163 Bit Score: 207.76 E-value: 1.34e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 351 PPPKGRVRYGGTGDSREGLWDDPEILLAAERYEAAGGPVPVYVPEMGDSGKQYRALVRLIFE-NQDAMSWLQNSKLSGPE 429
Cdd:pfam03584 1 PPPPGRVLYGGLGDSRPGLWGAPEVREARARFEASGAPAPVYVPELGDAAQQYAALVNLLYTpDAEPLGWLQNPRLNPGD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 430 HNLAQFCQKFIHAPRGHGSFITGSVANPLPHVGDAMARGDALWALPHAAASVAMSRRYDRTQKMFILQSLRRAYSDMAFP 509
Cdd:pfam03584 81 VALNQICQKISGAARNSGSAVTGSVARAVPHIGYAMAAGRALWALPHAAAAVAMSRRYDRAQKTFLLTSLRRAYAPLAFP 160
|
|
| PHA03308 |
PHA03308 |
transcriptional regulator ICP4; Provisional |
351-1085 |
2.09e-13 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 165563 [Multi-domain] Cd Length: 1463 Bit Score: 75.61 E-value: 2.09e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 351 PPPKGRVrYGGTGdSREGLWDDPEILLAAERYEAAGGPVPVYVPEMGDSGKQYRALVR--LIFENQDAMSWLQNSKLSGP 428
Cdd:PHA03308 358 PPSRGQV-YHGSG-YRQSLVDDPQVREAAAEFHANPKSASVYLEEYGMPVEQLERLVEefMVHPLSRVSYGYGGPKLSPR 435
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 429 EHNLAQFCqkfihAPRGHGSFITG----SVANPLPHVGDAMARGDALWALPHAAASVAMSRRYDRTQKMFILQSLRRAYS 504
Cdd:PHA03308 436 DKRLCELC-----ALRGPGSSEGGlsrsAVPTCLPHVAHAMRDGRVSLALPHLTELVRVCRRYDHPQKTYLLAALRRAFV 510
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 505 DMAFP----RPEGEGAPAAEPGSPPGPGPAAPSPRHDASSSSPTAGAPRSpPQARARVRD------AYARVCAALGARRA 574
Cdd:PHA03308 511 PFVFPgaavDPTAASASGDHPVLVGARRIARATRELEAAAKEPPAATPEK-LSSSALLRHtrtcivAAADLMAALTAIDC 589
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 575 PgePGEPGAARRHPGGARVKELGDACVLACHAALEALlrlrgGAAAVPGLQPGELPTPACPPEAL-------------CG 641
Cdd:PHA03308 590 P--PVTINPAKRRPDLYQALSRAPKTVFTWERAMPYC-----AASLWSRLVIGSLPLPSTDDVTLlveameaavgvlgCS 662
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 642 NPGGLRAAAAAIYElrdlverarllGPQDPGARLGDDDlrlAVRAVLVTARTVAPLVRYNPESARARASAWTLTRAAL-- 719
Cdd:PHA03308 663 DEGDVRPSIAYAAS-----------GWRMIATMLGDDS---APGSEHVTDDCPADDDTHHHDRRKRRGGRRTTCRYDLpp 728
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 720 SIPSLAARQMaeavaaLPGAPRPREAAEEGEADHLPPLWAHPPQPQPPGPPSPAAHRAPSPGRgpapaAPCASPAAARGL 799
Cdd:PHA03308 729 GTPDRAAHLL------LYGSPGGGDGAEPSAAQESPANPWPRAPPCDEQEPLSVSPYGPEPDR-----PPDDDFETRKGL 797
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 800 PEAS--EAASPRCLGRLPERRPRQRGKRRSEPPRPDEgtddsEERAGAATPPAPKRRPGAP-PPRALGPMPAGGPDPRGG 876
Cdd:PHA03308 798 KRKSseDHADPIPEGNATKKTCGLQGLPDSLPPAVPE-----TDRDNPLLPPCPITPEGPPcPPREEPQQPQEPQEPQSP 872
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 877 -----------FRRVP---------------RGESHTP---------APGEAARAAYCSPETVAELVDH----------- 910
Cdd:PHA03308 873 sfhiseigealFHSTPvsptilfapegfipnQGDVYRPhgknlgvalSAGEPYVPAHRARPALERLANYlrglssgpags 952
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 911 --PLFPEAWRPALTFDPAALATVAARRTgpPAREGARFgalapsgPLRRRAAW-MRQVPDPEDVRIVVLYHPLPGEdllg 987
Cdd:PHA03308 953 ysATGPADWLPAFARDPVALGEFCKRIS--PVNRGGRC-------VLEERLSWtLRHPADKIYDLIILVSERAPGE---- 1019
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 988 glpaggaagreggprWSERkgglSALLAALGNRLLTRGSHCWAGNWTG------PPDVSALNRQgVLLLSTGDLAFAGCV 1061
Cdd:PHA03308 1020 ---------------FLER----AYAYAALCGRACMPGGACWPESWTRgeypyiPPDEKDPGRS-VAILCTTDLGYAGAV 1079
|
810 820
....*....|....*....|....*
gi 675510769 1062 EYLCLR-LGSARRRLIVLDAVDPED 1085
Cdd:PHA03308 1080 EWMLERaLSTSGRACVVVDARDPGD 1104
|
|
| PHA03309 |
PHA03309 |
transcriptional regulator ICP4; Provisional |
351-509 |
4.79e-08 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 165564 [Multi-domain] Cd Length: 2033 Bit Score: 57.94 E-value: 4.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 351 PPPKGRVRYGGTGdSREGLWDDPEILLAAERYEAAGGPVPVYVPEMGDSGKQYRALV-RLIFENQDAMSW-LQNSKLSGP 428
Cdd:PHA03309 632 PPAADYVYYGKTG-YRPSMAAHPDVRRAAEEFSASDAAARVYVEEFGMAVEQHERLVaEFMLQPLSRVSHsYGGSRLNKT 710
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 429 EHNLAQFCQK-----------FIHAPRGHGSFITG--SVANPLPHVGDAMARGDALWALPHAAASVAMSRRYDRTQKMFI 495
Cdd:PHA03309 711 EKNLCKICLPpdggddrdgggKSRGGRGGGSKDASrtAMATGVPHIVHAMRDGRAALALPHLMDVIRVCRRYDASQKTYL 790
|
170
....*....|....
gi 675510769 496 LQSLRRAYSDMAFP 509
Cdd:PHA03309 791 LSCLRLAFAPLVFP 804
|
|
| PksD |
COG3321 |
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites ... |
734-1269 |
1.24e-07 |
|
Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442550 [Multi-domain] Cd Length: 1386 Bit Score: 56.42 E-value: 1.24e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 734 AALPGAPRPREAAEEGEADHLPPLWAHPPQPQPPGPPSPAAHRAPSPGRGPAPAAPCASPAAARGLPEASEAASPRCLGR 813
Cdd:COG3321 861 VPLPTYPFQREDAAAALLAAALAAALAAAAALGALLLAALAAALAAALLALAAAAAAALALAAAALAALLALVALAAAAA 940
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 814 LPERRPRQRGKRRSEPPRPDEGTDDSEERAGAATPPAPKRRPGAPPPRALGPMPAGGPDPRGGfrrvprgeshTPAPGEA 893
Cdd:COG3321 941 ALLALAAAAAAAAAALAAAEAGALLLLAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAALA----------LLAAAAL 1010
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 894 ARAAYCSPETVAELVDHPLFPEAWRPALTFDPAALATVAARRTGPPAREGARFGALAPSGPLRRRAAWMRQVPDPEDVRI 973
Cdd:COG3321 1011 LLAAAAAAAALLALAALLAAAAAALAAAAAAAAAAAALAALAAAAAAAAALALALAALLLLAALAELALAAAALALAAAL 1090
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 974 VVLYHPLPGEDLLGGLPAGGAAGREGGPRWSERKGGLSALLAALGNRLLTRGSHCWAGNWTGPPDVSALNRQGVLLLSTG 1053
Cdd:COG3321 1091 AAAALALALAALAAALLLLALLAALALAAAAAALLALAALLAAAAAAAALAAAAAAAAALALAAAAAALAAALAAALLAA 1170
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 1054 DLAFAGCVEYLCLRLGSARRRLIVLDAVDPEDWPADGPAVGQYHLYMRARLTPRAACAVRWPAERDLSRAVLTSGSVFGP 1133
Cdd:COG3321 1171 AALLLALALALAAALAAALAGLAALLLAALLAALLAALLALALAALAAAAAALLAAAAAAAALALLALAAAAAAVAALAA 1250
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 1134 VFFARVEAAFARLHPGLEAPRLCRAGNVAYVVETRAGERTRVPMPPRDYRQRVLPVYDGCKDMGAQSRGLAVFDPDFDEG 1213
Cdd:COG3321 1251 AAAALLAALAALALLAAAAGLAALAAAAAAAAAALALAAAAAAAAAALAALLAAAAAAAAAAAAAAAAAALAAALLAAAL 1330
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 675510769 1214 AARSHRAANRWGLGAPLRPLYLAAGRRGALDESAAPADLLPPALREFCRVALLEPD 1269
Cdd:COG3321 1331 AALAAAVAAALALAAAAAAAAAAAAAAAAAAALAAAAGAAAAAAALALAALAAAVA 1386
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
689-968 |
8.81e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.79 E-value: 8.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 689 VTARTVAPLVryNPESARARASAWTLTRAALSIPSLAARQMAEAVAALPGAPRPReAAEEGEADHLPPLWAHPPQPQPPG 768
Cdd:PHA03247 2582 VTSRARRPDA--PPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPA-ANEPDPHPPPTVPPPERPRDDPAP 2658
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 769 PPSPAAHRAPSPGRgPAPAAPCASPAAARGLPEA----SEAASPRCLGRLPERRPRQRGKRRSEPPRPDEGTDDSEERAG 844
Cdd:PHA03247 2659 GRVSRPRRARRLGR-AAQASSPPQRPRRRAARPTvgslTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPA 2737
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 845 AATPPAP---------KRRPGAPPPRALGPMPAGGPDPRGGFRR---VPRGESHTPAPGEAARAAYCSPETVAELVDHPL 912
Cdd:PHA03247 2738 APAPPAVpagpatpggPARPARPPTTAGPPAPAPPAAPAAGPPRrltRPAVASLSESRESLPSPWDPADPPAAVLAPAAA 2817
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 675510769 913 FPEAWRPALTFDP--AALATVAARRTGPPAREGARFGALAPSGPLRRRAAWMRQVPDP 968
Cdd:PHA03247 2818 LPPAASPAGPLPPptSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKP 2875
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
509-903 |
1.43e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 46.86 E-value: 1.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 509 PRPEGEGAPAAEPGSPPGPGPAAPSPRHDASSSSPTAGAPRSPPQARARVRDayarvcAALGARRAPGEPGEPGAA---- 584
Cdd:PHA03247 2575 PRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDP------PPPSPSPAANEPDPHPPPtvpp 2648
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 585 ----RRHPGGARVKELGDACVLACHAALEALLR------LRGGAAAVPGLQ----PGELPTPACPP--EALCGNPGGLRA 648
Cdd:PHA03247 2649 perpRDDPAPGRVSRPRRARRLGRAAQASSPPQrprrraARPTVGSLTSLAdpppPPPTPEPAPHAlvSATPLPPGPAAA 2728
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 649 AAAAIYELRDLVERARLLGPQDPGArlgddDLRLAVRAVLVTARTVAPlVRYNPESARARASAWTLTRAALSIPSLAARQ 728
Cdd:PHA03247 2729 RQASPALPAAPAPPAVPAGPATPGG-----PARPARPPTTAGPPAPAP-PAAPAAGPPRRLTRPAVASLSESRESLPSPW 2802
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 729 MAEAVAALPGAPRPREAAEEGEADHLPPLWAHPPQPQPPGPPSPAAHRAP-------------SPGRGPAPAAPCASPAA 795
Cdd:PHA03247 2803 DPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLggsvapggdvrrrPPSRSPAAKPAAPARPP 2882
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 796 ARGLPEASEAASPRCLGRLPERRPRQRGKRRSEPPRPdegTDDSEERAGAATPPAPKRRPGAPPPRALGPMPAGGPDPRG 875
Cdd:PHA03247 2883 VRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQP---QPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAV 2959
|
410 420 430
....*....|....*....|....*....|....*...
gi 675510769 876 ----------GFRRVPRGESHTPAPGEAARAAYCSPET 903
Cdd:PHA03247 2960 pqpwlgalvpGRVAVPRFRVPQPAPSREAPASSTPPLT 2997
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
538-929 |
3.71e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.98 E-value: 3.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 538 ASSSSPTAGAPRSPPQARARVRDAYARVCAALGARRA-PGEPGEPGAARRHPGGARVKELGDACVLACHAALEALLRLRG 616
Cdd:PRK07764 391 AGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAaPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAP 470
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 617 GAAAVPGLQPGELPTPACPPEALCGNP------------GGLRAAAAAIYEL---------RDLVERARLLGPQDP---- 671
Cdd:PRK07764 471 AAAPEPTAAPAPAPPAAPAPAAAPAAPaapaapagaddaATLRERWPEILAAvpkrsrktwAILLPEATVLGVRGDtlvl 550
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 672 -------GARLGDDD----LRLAVRAVLvtARTVAPLVRYNPESARARAsawtlTRAALSIPSLAARQMAEAVAalPGAP 740
Cdd:PRK07764 551 gfstgglARRFASPGnaevLVTALAEEL--GGDWQVEAVVGPAPGAAGG-----EGPPAPASSGPPEEAARPAA--PAAP 621
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 741 RPREAAEEGEADHLPPLWAHPPQPQPPGPPSPAAHRA-PSPGRGPAPAAPCASPAAARGLPEASEAASPRCLGRLPERRP 819
Cdd:PRK07764 622 AAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAvPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQP 701
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 820 RQRGKRRSEPPRPDEGTDDSEERAGAATPPAPKRRPGAPPPRALGPMPAGGPDPRGGfrrVPRGESHTPAPGEAARAAYC 899
Cdd:PRK07764 702 APAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQP---PPPPAPAPAAAPAAAPPPSP 778
|
410 420 430
....*....|....*....|....*....|..
gi 675510769 900 SPETVAELVD--HPLFPEAWRPALTFDPAALA 929
Cdd:PRK07764 779 PSEEEEMAEDdaPSMDDEDRRDAEEVAMELLE 810
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
808-968 |
4.72e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.93 E-value: 4.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 808 PRCLGRLPERRPRQRGKRRSEPP---RPDEGTDDSEERAGAATPPAPKRRPGAPPPRALGPMPAGGPDPRGGFRRVPRGE 884
Cdd:PHA03247 2571 PRPAPRPSEPAVTSRARRPDAPPqsaRPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPE 2650
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 885 --SHTPAPGEAARAAYCSPETVAELVDHPlfPEAWRPALTFDPAALATVAARRTGPPAREGARFGALAPSGPLRRRAAWM 962
Cdd:PHA03247 2651 rpRDDPAPGRVSRPRRARRLGRAAQASSP--PQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAA 2728
|
....*.
gi 675510769 963 RQVPDP 968
Cdd:PHA03247 2729 RQASPA 2734
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
495-909 |
1.19e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.44 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 495 ILQSLRRAYSDMAFPRPEGEGAPAAEPGSPPGPgpaapsprhdASSSSPTAGAPRSPPQARARVRDAYARVCAALGARRA 574
Cdd:PRK07764 374 LLARLERLERRLGVAGGAGAPAAAAPSAAAAAP----------AAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPS 443
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 575 PGEPGEPGAARRHPGGARvkelGDACVLACHAALEALLRLRGGAAAVPGLQPGELPTPACPPEALCGNPG-GLRAAAAAI 653
Cdd:PRK07764 444 PAGNAPAGGAPSPPPAAA----PSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAaTLRERWPEI 519
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 654 YEL---------RDLVERARLLGPQDP-----------GARLGDDD----LRLAVRAVLvtARTVAPLVRYNPESARARA 709
Cdd:PRK07764 520 LAAvpkrsrktwAILLPEATVLGVRGDtlvlgfstgglARRFASPGnaevLVTALAEEL--GGDWQVEAVVGPAPGAAGG 597
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 710 sawtlTRAALSIPSLAARQMAEAVAalPGAPRPREAAEEGEADHLPPLWAHPPQPQPPGPPSPAAHRA-PSPGRGPAPAA 788
Cdd:PRK07764 598 -----EGPPAPASSGPPEEAARPAA--PAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAvPDASDGGDGWP 670
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 789 PCASPAAARGLPEASEAASPRCLGRLPERRPRQRGKRRSEPPRPDEGTDDSEERAGAATPPAPKRRPGAPPPRALGPMPA 868
Cdd:PRK07764 671 AKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPD 750
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 675510769 869 GGPDPRGGfrrVPRGESHTPAPGEAARAAYCSPETVAELVD 909
Cdd:PRK07764 751 PAGAPAQP---PPPPAPAPAAAPAAAPPPSPPSEEEEMAED 788
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
702-874 |
1.39e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 43.30 E-value: 1.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 702 PESARARASAWTLTRAALSIPSLAARQMAEAVAALPGAPRPREAAEEGEADHLPPLWAHPPQPQPPGPPSPAAHRAPSPG 781
Cdd:PRK07003 372 VPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPA 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 782 RGPAPAAPCASPAAARGLPEASEAASPRCLGRLPERRPRQRGKRRSEPPRPDEGTDDSEERAGAATPPAPKRRPGAPPPR 861
Cdd:PRK07003 452 KANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPE 531
|
170
....*....|...
gi 675510769 862 ALGPMPAGGPDPR 874
Cdd:PRK07003 532 ARPPTPAAAAPAA 544
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
540-945 |
7.10e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 40.74 E-value: 7.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 540 SSSPTAGAPRSPPQARARVRDAY--ARVCAALGARRAPGEPGEPGAARRHPGGARVKElgdacvlacHAALEALLRLRGG 617
Cdd:PRK07764 383 RRLGVAGGAGAPAAAAPSAAAAApaAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPA---------PPSPAGNAPAGGA 453
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 618 AAAVPGLQPGELPTPACPPealcGNPGGLRAAAAAIYELRDLVERARLLGPQDPGARLGDDDLRLA---VRAVLVTA-RT 693
Cdd:PRK07764 454 PSPPPAAAPSAQPAPAPAA----APEPTAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERwpeILAAVPKRsRK 529
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 694 VAPLVRYNPESARARASAWTLTRAAlsiPSLAAR--------QMAEAVAALPGAPRPREAAEEGEADHLPPLWAHPPQPQ 765
Cdd:PRK07764 530 TWAILLPEATVLGVRGDTLVLGFST---GGLARRfaspgnaeVLVTALAEELGGDWQVEAVVGPAPGAAGGEGPPAPASS 606
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 766 PPGPPSPAAHRAPSPGRGPAPAAPCASpaaarglPEASEAASPRCLGRLPERRPRQRGKRRSEPPRPDEGTDDSEERAGA 845
Cdd:PRK07764 607 GPPEEAARPAAPAAPAAPAAPAPAGAA-------AAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPA 679
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 675510769 846 ATPPAPKRRPGAPPPRALGPMPAGGPDPRGGFRRVPRGESHTPAPGEAARAAYCSPETVAELVDHPLFPEAWRPALTFDP 925
Cdd:PRK07764 680 APPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPP 759
|
410 420
....*....|....*....|
gi 675510769 926 AALATVAARRTGPPAREGAR 945
Cdd:PRK07764 760 PPPAPAPAAAPAAAPPPSPP 779
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