NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|769829445|ref|YP_009128370|]
View 

NADH dehydrogenase subunit 1 (mitochondrion) [Tribolium confusum]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009622)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 8-311 3.56e-143

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177241  Cd Length: 306  Bit Score: 405.69  E-value: 3.56e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   8 MILLGFSMIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFN 87
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  88 FFISLLLWMVMPFVTVYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLIL 167
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 168 SLSLIDFSGYQFYSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSMIC 247
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 769829445 248 VMLFLGADLISYLFFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSLNFLLYYFCFKL 311
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKI 304
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 8-311 3.56e-143

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 405.69  E-value: 3.56e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   8 MILLGFSMIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFN 87
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  88 FFISLLLWMVMPFVTVYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLIL 167
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 168 SLSLIDFSGYQFYSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSMIC 247
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 769829445 248 VMLFLGADLISYLFFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSLNFLLYYFCFKL 311
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKI 304
NADHdh pfam00146
NADH dehydrogenase;
15-304 1.71e-103

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 305.17  E-value: 1.71e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   15 MIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFNFFISLLL 94
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   95 WMVMPF--VTVYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLILSLSLI 172
Cdd:pfam00146  82 FAVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  173 DFSGYQFYSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSMICVMLFL 252
Cdd:pfam00146 162 EIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFL 241

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 769829445  253 GADLISYL------FFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSLNFLL 304
Cdd:pfam00146 242 GGWLGPFPlpgllwFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLL 299
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-300 3.72e-98

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 292.42  E-value: 3.72e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   1 MTLILKDMILLGFSMIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIY 80
Cdd:COG1005    1 MSLLLAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  81 YFSPVFNFFISLLLWMVMPF--VTVYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALI 158
Cdd:COG1005   81 LLAPILAFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 159 LMSFVFLILSLSLIDFSGYQF-YSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEY 237
Cdd:COG1005  161 LLGVVLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEY 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 769829445 238 ASILFMSMICVMLFLG-----------ADLISYL-FFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSL 300
Cdd:COG1005  241 ANMFLVSALATTLFLGgwlgpfpilplGGLPGILwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
18-300 2.69e-53

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 177.59  E-value: 2.69e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  18 LVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFNFFISLLLWMV 97
Cdd:NF040610  19 LIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVA 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  98 MPFVTVYLN----------FNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLIL 167
Cdd:NF040610  99 IPFGAVIINgveyplvvtnMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAG 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 168 SLSLIDFSGYQFYSWFIFMCfPLGFM-WIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSMI 246
Cdd:NF040610 179 SLNIVEIVEAQSPIWFAFLQ-PIGFIvFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFL 257

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 769829445 247 CVMLFLGA-------------DLIS--YLFFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSL 300
Cdd:NF040610 258 VVLLFLGGwnlpgfvtdipvlGIILptLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
 
Name Accession Description Interval E-value
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 8-311 3.56e-143

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 405.69  E-value: 3.56e-143
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   8 MILLGFSMIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFN 87
Cdd:MTH00193   1 LMMMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  88 FFISLLLWMVMPFVTVYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLIL 167
Cdd:MTH00193  81 LFLSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 168 SLSLIDFSGYQFYSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSMIC 247
Cdd:MTH00193 161 SFNLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLF 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 769829445 248 VMLFLGADLISYLFFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSLNFLLYYFCFKL 311
Cdd:MTH00193 241 VLMFLGGDLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFFGLKI 304
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 9-311 5.52e-125

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 359.73  E-value: 5.52e-125
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   9 ILLGFSMIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFNF 88
Cdd:MTH00225   1 MSFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  89 FISLLLWMVMPFVTVYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLILS 168
Cdd:MTH00225  81 ILSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLT 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 169 LSLIDFSGYQFYSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSMICV 248
Cdd:MTH00225 161 YNLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTS 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 769829445 249 MLFLG--ADLISYLFFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSLNFLLYYFCFKL 311
Cdd:MTH00225 241 ILFFGgfFVTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLIILM 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 13-309 2.23e-124

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 358.41  E-value: 2.23e-124
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  13 FSMIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFNFFISL 92
Cdd:MTH00143   5 LSSVFTYLCVLLAVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILAL 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  93 LLWMVMPFVTVYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLILSLSLI 172
Cdd:MTH00143  85 LLWQLYPSYFSSSYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFI 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 173 DFSGYQFYSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSMICVMLFL 252
Cdd:MTH00143 165 EISESQFSVWLGFLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFF 244

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 769829445 253 GADLISYL-----FFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSLNFLLYYFCF 309
Cdd:MTH00143 245 GGSSVLFLlggvvFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILVLFVVL 306
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 8-313 2.69e-114

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 333.03  E-value: 2.69e-114
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   8 MILLGFSMIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFN 87
Cdd:MTH00218   1 MLLSLINLLLYILPVLLAVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  88 FFISLLLWMVMPFVTVYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLIL 167
Cdd:MTH00218  81 LTLALLLWMPLPLPFSLINLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 168 SLSLIDFSGYQFYSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSMIC 247
Cdd:MTH00218 161 GFSLEGFNLTQETIWLLIPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLS 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 769829445 248 VMLFLGADLISYLFFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSLNFLLYYFCFKLAI 313
Cdd:MTH00218 241 VILFLGTSLTTINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSF 306
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 8-314 9.94e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 329.16  E-value: 9.94e-113
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   8 MILLGFSMIIL-VVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVF 86
Cdd:MTH00111   3 TLLLNLINPLLyIIPILIAVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPIL 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  87 NFFISLLLWMVMPFVTVYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLI 166
Cdd:MTH00111  83 ALLLALTIWTPLPMPFPLADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLS 162

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 167 LSLSLIDFSGYQFYSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSMI 246
Cdd:MTH00111 163 GGYTLQTLATTQEPLWLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTL 242

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 769829445 247 CVMLFL-------GADLISYLFFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSLNFLLYYFCFKLAIF 314
Cdd:MTH00111 243 TTILFLnpstlnlPPELFTINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLA 317
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 9-317 8.60e-112

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 326.93  E-value: 8.60e-112
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   9 ILLGFSMIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFNF 88
Cdd:MTH00040   4 ILFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFL 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  89 FISLLLWMVMPFVTVYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLILS 168
Cdd:MTH00040  84 FLALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGS 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 169 LSLIDFSGYQFYSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSMICV 248
Cdd:MTH00040 164 FSLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSV 243

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 769829445 249 MLFLGADLISYLFF--------VKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSLNFLLYYFCFKLAIFVIL 317
Cdd:MTH00040 244 ILFLGGGSPFNEIFpiniiivgIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILP 320
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 8-306 2.68e-111

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 325.81  E-value: 2.68e-111
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   8 MILLGFSMIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFN 87
Cdd:MTH00071   4 LISLIINPLLYIIPVLLAVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMA 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  88 FFISLLLWMVMPFVTVYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLIL 167
Cdd:MTH00071  84 LTLALIIWTPLPMPNNLSNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTG 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 168 SLSLIDFSGYQFYSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSMIC 247
Cdd:MTH00071 164 GFSLMNFNTTQEFMWLIIPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLS 243

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 769829445 248 VMLFLGA-------DLISYLFFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSLNFLLYY 306
Cdd:MTH00071 244 TILFLGStynhlqpELSTMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFH 309
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 15-306 6.22e-110

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 321.96  E-value: 6.22e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  15 MIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFNFFISLLL 94
Cdd:MTH00104   6 ILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALTLALTM 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  95 WMVMPFVTVYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLILSLSLIDF 174
Cdd:MTH00104  86 WIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSFTLSTL 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 175 SGYQFYSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSMICVMLFLGA 254
Cdd:MTH00104 166 ITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTILFLGA 245

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 769829445 255 -------DLISYLFFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSLNFLLYY 306
Cdd:MTH00104 246 fhnpympELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWH 304
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 16-312 7.27e-109

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 319.63  E-value: 7.27e-109
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  16 IILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFNFFISLLLW 95
Cdd:MTH00134  13 LAYIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLW 92

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  96 MVMPFVTVYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLILSLSLIDFS 175
Cdd:MTH00134  93 APMPMPYPVTDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFN 172

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 176 GYQFYSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSMICVMLFLGAD 255
Cdd:MTH00134 173 TAQESIWLLLPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGAS 252

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 769829445 256 LISYL-------FFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSLNFLLYYFCFKLA 312
Cdd:MTH00134 253 HIPTLpelttinLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIA 316
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 8-304 5.90e-106

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 311.68  E-value: 5.90e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   8 MILLGFSMIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFN 87
Cdd:MTH00195   1 WMISVIHFLIQIVPVLLAVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  88 FFISLLLWMVMPFVTVYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLIL 167
Cdd:MTH00195  81 LALALILWVPIPSPFGFSSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAG 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 168 SLSLIDFSGYQFYSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSMIC 247
Cdd:MTH00195 161 SFDFTIMVISQGFSWVILLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLT 240

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 769829445 248 VMLFLGADLIsYLFFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSLNFLL 304
Cdd:MTH00195 241 TILFLGGGGT-IIVALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLI 296
NADHdh pfam00146
NADH dehydrogenase;
15-304 1.71e-103

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 305.17  E-value: 1.71e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   15 MIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFNFFISLLL 94
Cdd:pfam00146   2 ILLLLVPLLLAVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   95 WMVMPF--VTVYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLILSLSLI 172
Cdd:pfam00146  82 FAVIPFgpGLVLADLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLS 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  173 DFSGYQFYSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSMICVMLFL 252
Cdd:pfam00146 162 EIVEAQAGGWFIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFL 241

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 769829445  253 GADLISYL------FFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSLNFLL 304
Cdd:pfam00146 242 GGWLGPFPlpgllwFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLL 299
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 1-300 3.72e-98

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 292.42  E-value: 3.72e-98
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   1 MTLILKDMILLGFSMIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIY 80
Cdd:COG1005    1 MSLLLAPLLITLIKALVILVFLLLLAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  81 YFSPVFNFFISLLLWMVMPF--VTVYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALI 158
Cdd:COG1005   81 LLAPILAFIPALLAFAVIPFgpGLVLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 159 LMSFVFLILSLSLIDFSGYQF-YSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEY 237
Cdd:COG1005  161 LLGVVLLAGSLNLSEIVEAQAgGLWFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEY 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 769829445 238 ASILFMSMICVMLFLG-----------ADLISYL-FFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSL 300
Cdd:COG1005  241 ANMFLVSALATTLFLGgwlgpfpilplGGLPGILwFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSL 315
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 14-304 4.25e-96

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 286.68  E-value: 4.25e-96
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  14 SMIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFNFFISLL 93
Cdd:MTH00010   8 SILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALL 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  94 LWMVMPFVTVYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLILSLSLID 173
Cdd:MTH00010  88 LWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFSFSK 167

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 174 FSGYQfYSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSMICVMLFLG 253
Cdd:MTH00010 168 IIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTS 246

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 769829445 254 AD----LISYLFFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSLNFLL 304
Cdd:MTH00010 247 FIpsifISDLMLILKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLM 301
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 8-303 7.63e-94

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 281.23  E-value: 7.63e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   8 MILLGFSMIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFN 87
Cdd:MTH00054   1 MGIIIIKILAILVPLLISIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  88 FFISLLLWMVMPFVT--VYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFL 165
Cdd:MTH00054  81 LTLAFIAWGVIPYGEgvVLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLC 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 166 ILSLSLIDFSGYQFYSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSM 245
Cdd:MTH00054 161 VGSLNLTEIVLAQKNIWFIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMST 240

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 769829445 246 ICVMLFLGADLISY----------LFFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSLNFL 303
Cdd:MTH00054 241 FGVILFLGGWLVISgptsyfsnfvWFGIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFV 308
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 9-305 4.88e-91

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 274.30  E-value: 4.88e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   9 ILLGFSMIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFNF 88
Cdd:MTH00216   6 IFYLIKILIIIVPLLIAVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSF 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  89 FISLLLWMVMPFV--TVYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLI 166
Cdd:MTH00216  86 TLALIVWGVIPYErgVLISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCV 165

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 167 LSLSLIDFSGYQFYS-WFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSM 245
Cdd:MTH00216 166 GSLSITEIVLAQNNGiWFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSC 245

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 769829445 246 ICVMLFLG--ADLISYL------FFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSLNFLLY 305
Cdd:MTH00216 246 LTTILFLGgwLSPIKYFkggagwFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIF 313
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
9-300 7.67e-88

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 265.90  E-value: 7.67e-88
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   9 ILLGFSMIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFNF 88
Cdd:PRK06076  10 LLILLKAVVILVVVLLCVAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAF 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  89 FISLLLWMVMPFVT--VYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLI 166
Cdd:PRK06076  90 IPAFLAWAVIPFGPelVIADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLA 169

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 167 LSLSLIDFSGYQFYSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSMI 246
Cdd:PRK06076 170 GSLNLSDIVEAQFLSWNIIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSAL 249

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 769829445 247 CVMLFLG-----ADLISYL-----FFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSL 300
Cdd:PRK06076 250 ITTLFLGgwlppFPLGGGIpgaiwFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSL 313
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 9-304 1.01e-71

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 225.67  E-value: 1.01e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   9 ILLGFSMIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFNF 88
Cdd:MTH00029   7 ITVTIKLLIIFVPLLLSVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISF 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  89 FISLLLWMV--MPFVTVYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLI 166
Cdd:MTH00029  87 TLAILAWAIvtMDQGVFLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCV 166

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 167 LSLSLIDFSGYQFYSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSMI 246
Cdd:MTH00029 167 GSLNISEIVISQRSVWLIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCM 246

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 247 CVMLFLGADL-----------------------ISYLFFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSLNFL 303
Cdd:MTH00029 247 MTIFFLGGWLspldgiptppeafsifeqiasskSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLV 326


                 .
gi 769829445 304 L 304
Cdd:MTH00029 327 I 327
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 15-311 1.82e-63

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 202.05  E-value: 1.82e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  15 MIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFNFFISLLL 94
Cdd:MTH00090   2 LLLMMIFILQAIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLE 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  95 WMVMPFVTVYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFvflilslsLIDF 174
Cdd:MTH00090  82 WFVLPYFFDFLSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSI--------MLHN 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 175 SGYQFYSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSMICVMLFLGa 254
Cdd:MTH00090 154 NSFSFVSSFSLSLFVIYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK- 232

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 769829445 255 dlisYLFFVKLVFFSFFwIWVRGTLPRFRYDKLMYLAWKSFLPSSLNFLLYYFCFKL 311
Cdd:MTH00090 233 ----FSFLMLFLIFSLL-IFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLGFFVVLFI 284
F420_dehyd_FpoH NF040610
F420H2 dehydrogenase subunit FpoH;
18-300 2.69e-53

F420H2 dehydrogenase subunit FpoH;


Pssm-ID: 468582  Cd Length: 339  Bit Score: 177.59  E-value: 2.69e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  18 LVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFNFFISLLLWMV 97
Cdd:NF040610  19 LIGAVFGGAMLAVWLERKLSADIQFRYGPNRVGPWGILQLVADAIKLFTKEDIIPRKADKLLYVSAPIVAMGSVFLMLVA 98

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  98 MPFVTVYLN----------FNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLIL 167
Cdd:NF040610  99 IPFGAVIINgveyplvvtnMDISILYIEAVSAISIIGIFMAGYSSNNKYSLLGAFRNFARMIGYEVPLGICVVSVAIMAG 178

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 168 SLSLIDFSGYQFYSWFIFMCfPLGFM-WIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSMI 246
Cdd:NF040610 179 SLNIVEIVEAQSPIWFAFLQ-PIGFIvFFIALMADMGRLPFDQNEAEEELIAGWITEYSGMRFGLGFFAEYIHLILGSFL 257

                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 769829445 247 CVMLFLGA-------------DLIS--YLFFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSL 300
Cdd:NF040610 258 VVLLFLGGwnlpgfvtdipvlGIILptLFFLMKVAIVLMFIIMIRWAVPRFRIDQVVDLSWKRLLPLSL 326
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 9-304 7.37e-53

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 175.11  E-value: 7.37e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   9 ILLGFSMIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFNF 88
Cdd:MTH00058   1 IFGLVSGLEGLLIILLLVAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  89 FISLLLWMVMPFVTVYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLILS 168
Cdd:MTH00058  81 LLVVFYCFIYGSYYSGSYSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGS 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 169 LSLIDFSGYQFYSWFIFMCFPlgFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFMSMICV 248
Cdd:MTH00058 161 YSLVDFYYSGWLSVLLFPLIY--ILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGS 238

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 769829445 249 MLFLGADLISYLFFVKLVFFsffwIWVRGTLPRFRYDKLMYLAWKSFLPSSLNFLL 304
Cdd:MTH00058 239 VLFFGGGFVSIMLLFHLLFF----MWARATLPRVRYDYFVNFFWEYCLVLLILSLF 290
ndhA CHL00032
NADH dehydrogenase subunit 1
 8-312 5.70e-50

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 169.75  E-value: 5.70e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   8 MILLGFSMIILVVCVLVGVAFLTLLERKVLGYIQIRKGPNKVGFMGLLQPFSDAIKLFTKEQTFPYMSNLNIYYFSPVFN 87
Cdd:CHL00032  26 LIWILVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIA 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  88 FFISLLLWMVMPFVT--VYLNFNLSLLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFL 165
Cdd:CHL00032 106 VISILLSYLVIPFGYhlVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLL 185

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 166 ILSLSLIDF----SGYQFYSWFIFMCfPLGFM-WIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASI 240
Cdd:CHL00032 186 SNSLSTVDIveaqSKYGFWGWNLWRQ-PIGFIvFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNL 264

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 241 LFMSMICVMLFLGA-DL-ISYLFF-----------------------VKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSF 295
Cdd:CHL00032 265 LVSSLFVTVLYLGGwNLsIPYIFIpelfeinktggvfgttigifitlAKTYLFLFISITTRWTLPRLRMDQLLNLGWKFL 344

                        330
                 ....*....|....*..
gi 769829445 296 LPSSLNFLLYYFCFKLA 312
Cdd:CHL00032 345 LPISLGNLLLTTSFQLL 361
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
9-307 2.59e-30

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 116.44  E-value: 2.59e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445   9 ILLGFSMIILVVCVLVGVAFLTLLERKVLGYIQIRKGPnkvgfmGLLQPFSDAIKLFTKEQTFPYmSNLNIYYFSPVFNF 88
Cdd:COG0650    1 MMLILLALLQLLLALLLAPLLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPE-TASWLFRAAPYVAL 73

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445  89 FISLLLWMVMPFVTVYLNFNLS--LLFFLAVSSLSVYTVMMAGWSSNSSYALLGSLRAVAQTISYEVSLALILMSFVFLI 166
Cdd:COG0650   74 AAMLLAALLVPVLTTGPPLSFSgdLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLA 153

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 167 LSLSLIDFSGYQ---FYSWFIFMCFPLGFMWIISSLAETNRTPFDFAEGESELVSGFNVEYSSGGFAMIFLAEYASILFM 243
Cdd:COG0650  154 GSTSLSDIVAYQaahGPLLLSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVL 233

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 769829445 244 SMICVMLFLGADLISYL------FFVKLVFFSFFWIWVRGTLPRFRYDKLMYLAWKSFLPSSLNFLLYYF 307
Cdd:COG0650  234 LSLFVNLFLPWGIALTLllalllFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLAVL 303
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH