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Conserved domains on  [gi|1610635756|ref|YP_009590261|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Piranga erythrocephala]

Protein Classification

ND4L family protein( domain architecture ID 10009575)

ND4L family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 7.21e-41

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177184  Cd Length: 98  Bit Score: 129.97  E-value: 7.21e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1610635756  1 MSYLHLSFYSAFTLSSLGLAFHRTHLISALLCLESMMLSMYIALAMWPIQMQSPTATILPILMLTFSACEAGTGLALLVA 80
Cdd:MTH00125   1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                         90
                 ....*....|....*...
gi 1610635756 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00125  81 TTRTHGSDHLKNLNLLQC 98
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 7.21e-41

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 129.97  E-value: 7.21e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1610635756  1 MSYLHLSFYSAFTLSSLGLAFHRTHLISALLCLESMMLSMYIALAMWPIQMQSPTATILPILMLTFSACEAGTGLALLVA 80
Cdd:MTH00125   1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                         90
                 ....*....|....*...
gi 1610635756 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00125  81 TTRTHGSDHLKNLNLLQC 98
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
3-98 1.55e-14

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 62.97  E-value: 1.55e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1610635756  3 YLHLSFYSAFTLSSLGLAFHRtHLISALLCLESMMLSMYIALAMWPIQMQSPTATILPILMLTFSACEAGTGLALLVAST 82
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLLLRR-NLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|....*.
gi 1610635756 83 RTHGSDHLHNFNLLQC 98
Cdd:pfam00420 80 RTHGTDDVDSLNLLKG 95
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 4-96 4.98e-06

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 41.20  E-value: 4.98e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1610635756  4 LHLSFYSAFTLSSLGL--AFHRTHLISALLCLESMMLSMYIALAMWPIQMQSPTATILPILMLTFSACEAGTGLALLVAS 81
Cdd:COG0713    3 LEHYLILAAILFAIGLygVLTRRNLIVVLMSIELMLNAVNLNLVAFSRYLGDLDGQVFALFVIAVAAAEVAVGLAIIVAL 82

                         90
                 ....*....|....*
gi 1610635756 82 TRTHGSDHLHNFNLL 96
Cdd:COG0713   83 YRNRGTIDVDDLNEL 97
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 7.21e-41

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 129.97  E-value: 7.21e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1610635756  1 MSYLHLSFYSAFTLSSLGLAFHRTHLISALLCLESMMLSMYIALAMWPIQMQSPTATILPILMLTFSACEAGTGLALLVA 80
Cdd:MTH00125   1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                         90
                 ....*....|....*...
gi 1610635756 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00125  81 TTRTHGSDHLKNLNLLQC 98
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 1-98 2.19e-38

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 123.54  E-value: 2.19e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1610635756  1 MSYLHLSFYSAFTLSSLGLAFHRTHLISALLCLESMMLSMYIALAMWPIQMQSPTATILPILMLTFSACEAGTGLALLVA 80
Cdd:MTH00126   1 MTPVHFSFSSAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAAPMLLLAFSACEASAGLALLVA 80

                         90
                 ....*....|....*...
gi 1610635756 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00126  81 TARTHGTDRLQNLNLLQC 98
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 1-98 3.53e-38

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 123.17  E-value: 3.53e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1610635756  1 MSYLHLSFYSAFTLSSLGLAFHRTHLISALLCLESMMLSMYIALAMWPIQMQSPTATILPILMLTFSACEAGTGLALLVA 80
Cdd:MTH00067   1 MSPTYFTFYSAFLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSLPMFMLTFSACEASTGLALMVA 80

                         90
                 ....*....|....*...
gi 1610635756 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00067  81 TTRTHGTDHLKNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 1-98 3.71e-25

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 89.99  E-value: 3.71e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1610635756  1 MSYLHLSFYSAFTLSSLGLAFHRTHLISALLCLESMMLSMYIALAMWPIQMQSPTATILPILMLTFSACEAGTGLALLVA 80
Cdd:MTH00107   1 MSLIYMNIMLAFTISLLGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMMPIILLVFAACEAAVGLALLVM 80

                         90
                 ....*....|....*...
gi 1610635756 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00107  81 VSNTYGTDYVQNLNLLQC 98
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 4-96 1.20e-20

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 78.45  E-value: 1.20e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1610635756  4 LHLSFYSAFTLSSLGLAFHRTHLISALLCLESMMLSMYIALAMWPIQMQSPTATILPILMLTFSACEAGTGLALLVASTR 83
Cdd:MTH00181   1 MMFVFISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALFSLLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNR 80

                         90
                 ....*....|...
gi 1610635756 84 THGSDHLHNFNLL 96
Cdd:MTH00181  81 THGSDHLLKFNLL 93
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 1-97 3.88e-15

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 64.55  E-value: 3.88e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1610635756  1 MSYLHLSFYSAFTLSSLGLAFHRTHLISALLCLESMMLSMYIALAMWPIQMQSPTATILPILMLTFSACEAGTGLALLVA 80
Cdd:MTH00043   1 MNIILIIILSSFFLGLLGILINRLHLLSILLCLELLLISLFLNISIWSLNYGNFSNLSFSLLLLTLSACEASIGLSLMVL 80

                         90
                 ....*....|....*..
gi 1610635756 81 STRTHGSDHLHNFNLLQ 97
Cdd:MTH00043  81 LSRNHNSDLVASLNLLQ 97
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
3-98 1.55e-14

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 62.97  E-value: 1.55e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1610635756  3 YLHLSFYSAFTLSSLGLAFHRtHLISALLCLESMMLSMYIALAMWPIQMQSPTATILPILMLTFSACEAGTGLALLVAST 82
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLLLRR-NLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|....*.
gi 1610635756 83 RTHGSDHLHNFNLLQC 98
Cdd:pfam00420 80 RTHGTDDVDSLNLLKG 95
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 6-98 8.16e-11

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 53.44  E-value: 8.16e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1610635756  6 LSFYSAFTLSSLGLAFHRTHLISALLCLESMMLSMYIALAMWPIQMQSptATILPILMLTFSACEAGTGLALLVASTRTH 85
Cdd:MTH00188   7 LVILLFVVLGLFTFLLNRKHLLMLLLSLEAIMLSLFWFLLVGLSYMEK--ELYLSLVLLTFAACEASVGLALLVSLIRSH 84

                         90
                 ....*....|...
gi 1610635756 86 GSDHLHNFNLLQC 98
Cdd:MTH00188  85 GSDYVSSLNLIKC 97
ND4L MTH00180
NADH dehydrogenase subunit 4L; Provisional
 12-97 2.66e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177231  Cd Length: 99  Bit Score: 46.95  E-value: 2.66e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1610635756 12 FTLSSLGLAFHRTHLISALLCLESMMLSMYIALAMWPIQMQSPTATILPILMLTFSACEAGTGLALLVASTRTHGSDHLH 91
Cdd:MTH00180  13 FILGVLGIVLNRSNLIIMLMSIELMLLAISLLFLINSVAIDNLIGQIFTIMILTVAAAESAIGLAILVAYYRIRGTIAVK 92


                 ....*.
gi 1610635756 92 NFNLLQ 97
Cdd:MTH00180  93 SLNLLR 98
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.71e-07

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 44.84  E-value: 1.71e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1610635756  1 MSYLHLSFYSAFTLSSLGLAFHRTHLISALLCLESMMLSMYIAlaMWPIQMQSPTATILPILMLTFSACEAGTGLALLVA 80
Cdd:MTH00149   2 MFMLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVM--MFSSSGLISFSSYLFLIILTFGACEASLGLSLLVS 79

                         90
                 ....*....|....*...
gi 1610635756 81 STRTHGSDHLHNFNLLQC 98
Cdd:MTH00149  80 LIRLHGNDYVSSLSSLKF 97
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 12-98 8.26e-07

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 43.20  E-value: 8.26e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1610635756 12 FTLSSLGLAFHRTHLISALLCLESMMLSMYIaLAMWPIQMQSPTATILPILMLTFSACEAGTGLALLVASTRTHGSDHLH 91
Cdd:MTH00013  12 PFISMFNLSLQRKHLLMSLLSLEAMILSLAL-FIPLSLMFANQVNGMLAIVLLTFGACEASLGLSLLVLMTRSYGNDMLK 90


                 ....*..
gi 1610635756 92 NFNLLQC 98
Cdd:MTH00013  91 SLTSNKC 97
PRK05715 PRK05715
NADH-quinone oxidoreductase subunit NuoK;
12-96 2.27e-06

NADH-quinone oxidoreductase subunit NuoK;


Pssm-ID: 180218  Cd Length: 100  Bit Score: 42.09  E-value: 2.27e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1610635756  12 FTLSSLGLaFHRTHLISALLCLESMMLSMYIALAMWPIQMQSPTATILPILMLTFSACEAGTGLALLVASTRTHGSDHLH 91
Cdd:PRK05715   15 FCIGLVGL-LLRRNAIVVLMSIELMLNAVNLNFVAFSSYLGDLDGQVFAFFVITVAAAEAAIGLAILLQLYRNRGTIDVD 93


                  ....*
gi 1610635756  92 NFNLL 96
Cdd:PRK05715   94 DLNEL 98
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 3-92 2.35e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 41.68  E-value: 2.35e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1610635756  3 YLHLSFYSAFTLSSLGLAFHRTHLISALLCLESMMLSMYIALAMWPIQMQSPTatILPILMLTFSACEAGTGLALLVAST 82
Cdd:MTH00162   2 MMLLIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFNYEL--YFLLFFLTFSVCEGALGLSILVSMI 79

                         90
                 ....*....|
gi 1610635756 83 RTHGSDHLHN 92
Cdd:MTH00162  80 RSHGNDYFSS 89
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 4-96 4.98e-06

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 41.20  E-value: 4.98e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1610635756  4 LHLSFYSAFTLSSLGL--AFHRTHLISALLCLESMMLSMYIALAMWPIQMQSPTATILPILMLTFSACEAGTGLALLVAS 81
Cdd:COG0713    3 LEHYLILAAILFAIGLygVLTRRNLIVVLMSIELMLNAVNLNLVAFSRYLGDLDGQVFALFVIAVAAAEVAVGLAIIVAL 82

                         90
                 ....*....|....*
gi 1610635756 82 TRTHGSDHLHNFNLL 96
Cdd:COG0713   83 YRNRGTIDVDDLNEL 97
ND4L MTH00001
NADH dehydrogenase subunit 4L; Provisional
 12-97 8.29e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177099  Cd Length: 99  Bit Score: 40.82  E-value: 8.29e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1610635756 12 FTLSSLGLAFHRTHLISALLCLESMMLSMYIALAMWPIQMQSPTATILPILMLTFSACEAGTGLALLVASTRTHGSDHLH 91
Cdd:MTH00001  13 FLLGIWGIILNRGHFIIMLVSIELVLLSTFFLFLINSIEIDLLIEQIFTIMGLTIAAAESAIGLAIMVAYYRIRGTISLK 92


                 ....*.
gi 1610635756 92 NFNLLQ 97
Cdd:MTH00001  93 SLNSLR 98
ND4 MTH00127
NADH dehydrogenase subunit 4; Provisional
 61-98 5.54e-03

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177186 [Multi-domain]  Cd Length: 459  Bit Score: 34.55  E-value: 5.54e-03
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1610635756  61 ILMLTFSACEAGTGLALLVASTRTHGSDHLHNFNLLQC 98
Cdd:MTH00127  395 ALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHT 432
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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