|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
3.27e-167 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 469.69 E-value: 3.27e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 1 MNPQAKLVFATSLLLGSTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWD 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 81 TGQWDITQLTCPASCTILTAAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPITLLFMTSQSLNPTMLTLMAIL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 161 SVALGGWTGLNQTQTRKILAFSSISHLGWMAAIIIYSPKLALLNFYLYIMITAAVFLTLNSIKTLKLSTLMTTWAKTPSL 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMATTAVIIALLSLLSLFFYLRLAYCATITLPPHTTNHMKQWHTNKP 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTKPK 320
|
330 340
....*....|....*....|....*.
gi 1998563114 321 VNTTVAVLVTMSIALLPMSPTILTLI 346
Cdd:MTH00112 321 KNTLTATLTTLSTLLLPLSPMILTII 346
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
1.02e-135 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 389.67 E-value: 1.02e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 1 MNPQAKLVFATSLLLGSTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWD 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 81 TGQWDITQLTCPASCTILTAAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPITLLFMTSQSLNPTMLTLMAIL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 161 SVALGGWTGLNQTQTRKILAFSSISHLGWMAAIIIYSPKLALLNFYLYIMITAAVFLTLNSIKTLKLSTLMTTWAKTPSL 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMATTAVIIALLSLLSLFFYLRLAYCATITLPPHTTNHMKQWHTNKP 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFKNK 320
|
330 340
....*....|....*....|....*.
gi 1998563114 321 VNTTVAVLVTMSIALLPMSPTILTLI 346
Cdd:MTH00070 321 TNNLLSLTIILSLMLLPITPTILNLF 346
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
2.65e-134 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 386.08 E-value: 2.65e-134
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 1 MNPQAKLVFATSLLLGSTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWD 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 81 TGQWDITQLTCPASCTILTAAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPITLLFMTSQSlNPTMLTLMAIL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAPT-NPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 161 SVALGGWTGLNQTQTRKILAFSSISHLGWMAAIIIYSPKLALLNFYLYIMITAAVFLTLNSIKTLKLSTLMTTWAKTPSL 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMATTAVIIALLSLLSLFFYLRLAYCATITLPPHTTNHMKQWHTNKP 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330 340
....*....|....*....|....*..
gi 1998563114 321 VNTT-VAVLVTMSIALLPMSPTILTLI 346
Cdd:MTH00135 320 QLTLpLAISTTATLMLLPLTPAILALL 346
|
|
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
3.40e-119 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 347.60 E-value: 3.40e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 1 MNPQAKLVFATSLLLGSTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWD 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 81 TGQWDITQLTCPASCTILTAAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPITLLFMTSQSLNPTMLTLMAIL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 161 SVALGGWTGLNQTQTRKILAFSSISHLGWMAAIIIYSPKLALLNFYLYIMITAAVFLTLNSIKTLKLSTLMTTWAKTPSL 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMATTAVIIALLSLLSLFFYLRLAYCATITLPPhTTNHMK-QWH-TN 318
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFP-STNNMKmKWQfEN 319
|
330 340
....*....|....*....|....*..
gi 1998563114 319 KPVNTTVAVLVTMSIALLPMSPTILTL 345
Cdd:MTH00105 320 TKPMTLLPTLIILSTMLLPLTPMLSIL 346
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-346 |
4.55e-100 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 299.19 E-value: 4.55e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 1 MNPQAKLVFATSLLLGSTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWD 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 81 TGQWDITQLTCPASCTILTAAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPITLLFMTSQSLNPTMLTLMAIL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 161 SVALGGWTGLNQTQTRKILAFSSISHLGWMAAIIIYSPKLALLNFYLYIMITAAVFLTLNSIKTLKLSTLMTTWAKTPSL 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMATTAVIIALLSLLSLFFYLRLAYCATITLPPHTTNHMKQWHTNKP 320
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSN 320
|
330 340
....*....|....*....|....*.
gi 1998563114 321 VNTTVAVLVTMSIALLPMSPTILTLI 346
Cdd:MTH00200 321 SNLLVGLLLLLSILGLPLTPQLLFLF 346
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-267 |
1.88e-86 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 264.49 E-value: 1.88e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 1 MNPQAKLVFATSLLLGSTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWD 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 81 TGQWDITQLTCPASCTILTAAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPITLLFMTSQSLNPTMLTLMAIL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 161 SVALGGWTGLNQTQTRKILAFSSISHLGWMAAIIIYSPKLALLNFYLYIMITAAVFLTLNSIKTLKLSTLMTTWAKTPSL 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260
....*....|....*....|....*..
gi 1998563114 241 SAMLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISL 267
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-345 |
3.91e-61 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 198.89 E-value: 3.91e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 1 MNPQAKLVFATSLLLGSTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWd 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNML- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 81 tgqwdITQLTCPASCTILTAAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPITLLFMTsqsLNPTMLTLMAIL 160
Cdd:MTH00160 81 -----NLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYL---INNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 161 SVALGGWTGLNQTQTRKILAFSSISHLGWMAAIIIYSPKLALLNFYLYIMITAAVFLTLNSIKTLKLSTLMTTWAKTPSL 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 241 SAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMATTAVIIALLSLLSLFFYLRLAYCAtITLPPHTTNHMKQWHTNKP 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSS-LMLNYNKNKWNLKKKKNKF 311
|
330 340
....*....|....*....|....*
gi 1998563114 321 vNTTVAVLVTMSIALLPMSPTILTL 345
Cdd:MTH00160 312 -SLILNFLSFISLFGLILSSLLFLL 335
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
5-275 |
5.48e-52 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 175.07 E-value: 5.48e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 5 AKLVFATSLLLGSTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWDTGQW 84
Cdd:MTH00144 5 SNLLFLFLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLIMYNLSFSW 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 85 DITqltcpascTILTAAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPITLLFMTSQSLNP-TMLTLMAILSVA 163
Cdd:MTH00144 85 FSM--------SLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSAL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 164 LGGWTGLNQTQTRKILAFSSISHLGWMAAIIIYSPKLALLNFYLYIMITAAVFLTLNSIKTLKLSTLmtTWAKTPSLSAM 243
Cdd:MTH00144 157 VGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDL--GSLKPSYKTGL 234
|
250 260 270
....*....|....*....|....*....|...
gi 1998563114 244 L-MLTLLSLAGLPPLTGFLPKWLIIQELTKQEM 275
Cdd:MTH00144 235 SiISLLLSLGGLPPFLGFCSKLLVLISSMESSP 267
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-275 |
5.31e-49 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 167.26 E-value: 5.31e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 7 LVFATSLLLGSTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSmtnawdTGQWDI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLGM------TMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 87 TQLTCPASCTILTAAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPITLLFMTSQSLNPTMLTLMAILSVALGG 166
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 167 WTGLNQTQTRKILAFSSISHLGWMAAIIIYSPKLALLNFYLYIMITAAVFLTLNSIKTLKLSTLMTTWAKTPSLSAMLML 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260
....*....|....*....|....*....
gi 1998563114 247 TLLSLAGLPPLTGFLPKWLIIQELTKQEM 275
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSM 271
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-270 |
1.37e-41 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 147.51 E-value: 1.37e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 8 VFATSLLLGSTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWDTgqwdit 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFSNL------ 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 88 qLTCPASCTILTAAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPITLLfmTSQSLNPTMLTLMAILSVALGGW 167
Cdd:MTH00197 76 -YLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLIL--AFNSSSFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 168 TGLNQTQTRKILAFSSISHLGWMAAIIIYSPKLALLNFYLYIMITAAVFLTLNSIKTLKLSTLMTTWAKTPSLSAMLMLT 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260
....*....|....*....|...
gi 1998563114 248 LLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSL 255
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
1.50e-29 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 116.28 E-value: 1.50e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 13 LLLGSTITISSNHWITAWAGLEINTLAILPLI-SKSHHPRAIEAATKYFLVQAAASTLLLFS-------------SMTNA 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIaQNRGSGYSAEAGLKYFVLGALSSGLFLFGcallcgttgglhlSYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 79 WDTGQWDITQLTCPASCTILTAAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPITLLFmtSQSLNPTMLTLMA 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILV--SIGLNVNILLIGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 159 ILSVALGGWTGLNQTQTRKILAFSSISHLGWMAAII----IYSPKLALLNFYLYIMITAAVFLTLNSIKTLK--LSTLMT 232
Cdd:MTH00196 160 LFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeigsFESIQASLVYLFIYIIMSICVFSIILALNVYKnlIIEFSG 239
|
250 260 270
....*....|....*....|....*....|....*
gi 1998563114 233 TWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00196 240 LSRRLPILAITLALTFLSIAGIPPLVGFLGKWLIL 274
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
7-283 |
1.97e-29 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 117.52 E-value: 1.97e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 7 LVFATsllLGSTITISSNHWITAWAGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLLLF------------- 72
Cdd:COG1007 108 LLFAT---LGMMLMASANDLLTLFLGLELLSLSLYVLVAfRRDDRRSSEAALKYFLLGALSSGFLLYgisllygatgsln 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 73 -SSMTNAWDTGQWDITQLTcpASCTILTAAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMK----FPPITLLFMTSQ 147
Cdd:COG1007 185 lAGIAAALAAGGANSPLLL--LGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaafAALLRLLVEAFP 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 148 SLNP---TMLTLMAILSVALGGWTGLNQTQTRKILAFSSISHLGWMAAIIIYSPKLAL--LNFYL--YIMITAAVFLTLN 220
Cdd:COG1007 263 GLAAdwqLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLGVsaALFYLlaYLFMNLGAFAVIL 342
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1998563114 221 SI-KTLKLSTLMTTWA----KTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMATTAVIIA 283
Cdd:COG1007 343 LLsRKGGEAEEIEDLAglarRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAV 410
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
5.39e-26 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 105.09 E-value: 5.39e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 23 SNHWITAWAGLEINTLAILPLI-SKSHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWDTGQWDITQL-----TCPASCT 96
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIgYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELskaltGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 97 ILTAAIAM------KLGLAPFHFWFPEVLQGCSL-ITGLLLSTAMKFPPITLLFMTS--QSLNPTM---LTLMAILSVAL 164
Cdd:pfam00361 81 LLLLFLLIlvgflfKSAQVPFHTWLPDAYEGAPTpVSALLAATLVKAGGYGLIRRSLlyLPSSPFIqqiLLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 165 GGWTGLNQTQTRKILAFSSISHLGWM----AAIIIYSPKLALLNFYLYIMITAAVFLTLNSI-----KTLKLSTLMTTWA 235
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMlialGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSViyrrvHTRNIRDYGGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 1998563114 236 KTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
14-281 |
1.79e-25 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 106.44 E-value: 1.79e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 14 LLGSTITISSNHWITAWAGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLLL--------------FSSMTNA 78
Cdd:PRK05777 113 LLGMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLygmsllygatgslsFAGIAKA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 79 WDTGQWDITQLTcpASCTILTAAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMK---FPPIT-LLFMTSQSLNPT-- 152
Cdd:PRK05777 193 LADGSGNSLLLL--FGLVFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKiaaFAVLLrLLVVAFGGLSEDwq 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 153 -MLTLMAILSVALGGWTGLNQTQTRKILAFSSISHLGWMAAIIIYSPKLAL--LNFYL--YIMITAAVF--LTLNSIKTL 225
Cdd:PRK05777 271 qVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYsaVLFYLlaYLFMTLGAFgvISLLRRKGG 350
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 226 KLSTLmTTWA----KTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMATTAVI 281
Cdd:PRK05777 351 EAESI-SDFAglskRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVI 409
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
13-267 |
2.89e-25 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 105.87 E-value: 2.89e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 13 LLLGSTITISSNHWITAWAGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWDTGQWDI----T 87
Cdd:MTH00199 106 VALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSIqginS 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 88 QLTCPASCTILTAAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPITLLFMTSQSLNptMLTLMAILSVALGGW 167
Cdd:MTH00199 186 ILTGDVGKILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTN--VVLICAVLSIIYGAI 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 168 TGLNQTQTRKILAFSSISHLG---WMAAIIIY-SPKLALLNFYLYIMITAAVFLTLNSIKTLK--LSTLMTTWAKTPSLS 241
Cdd:MTH00199 264 GALNQTKIKRLLAYSGIGHMGfilFGVAIGSFeSIQASLIYMIIYVIMSICSFSIILSLKLTKglIVEVSGLSRKNPVIA 343
|
250 260
....*....|....*....|....*.
gi 1998563114 242 AMLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00199 344 LTLALTFLSIAGIPPLAGFLSKWLIL 369
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
14-282 |
3.68e-23 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 99.64 E-value: 3.68e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 14 LLGSTITISSNHWITAWAGLEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWDTGQWDITQLTCP 92
Cdd:TIGR01770 112 LLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLF 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 93 ASCTILT------------AAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMK---FPPITLLFMTSQS----LNPTM 153
Cdd:TIGR01770 192 LSNGMLNisllllgivlilVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKiaiFAVFLRLFLYILFgfseAWQIF 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 154 LTLMAILSVALGGWTGLNQTQTRKILAFSSISHLGWMAAIIIYSPKLALLNFYLYIMITA-------AVFLTLNSIK--- 223
Cdd:TIGR01770 272 LAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYAlmslgafGVLSLLRSYKdew 351
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1998563114 224 TLKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMATTAVII 282
Cdd:TIGR01770 352 IEYISDFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIA 410
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
13-283 |
1.33e-19 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 89.05 E-value: 1.33e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 13 LLLGSTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWDTGQWDITQLTCP 92
Cdd:COG0651 116 LLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAAR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 93 AS----------CTILTAAIAMKLGLAPFHFWFPEVLQGCS-----LITGLLLSTA----MKFppITLLFMTSQSLNP-T 152
Cdd:COG0651 196 LAeldpglllaaFALLLVGFGIKAALFPLHFWLPDAYPAAPspvsaLLSGLLTKVGvyaiLRV--LTLLFGADPALFLgT 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 153 MLTLMAILSVALGGWTGLNQTQTRKILAFSSISHLGWMAAIIIYSPKLALLNFYLYI----MITAAVFLTLNSI----KT 224
Cdd:COG0651 274 LLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLlnhaLAKALLFLAAGAIeratGT 353
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 1998563114 225 LKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMATTAVIIA 283
Cdd:COG0651 354 RDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLL 412
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
15-267 |
3.65e-18 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 85.30 E-value: 3.65e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 15 LGSTITISSNHWITAWAGLEINTLAILPLISKSHHPRAI---------EAATKYFLVQAAASTLLLFSSMTNAWDTGQWD 85
Cdd:MTH00198 199 LGGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNEG 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 86 I--TQLTCPASCT------------ILTAAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPITLLfmTSQSLNP 151
Cdd:MTH00198 279 MlgTILSATLETTnielrqgslgylFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILL--TSLVITS 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 152 TMLTLMAILSVALGGWTGLNQTQTRKILAFSSISHLGWMAAIIIYSPKLALLNFYLYIMI-TAAVFLTLNSIKTL----- 225
Cdd:MTH00198 357 KLLLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTyLVSALASFTVICTLeefgt 436
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1998563114 226 -------------------KLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00198 437 rtptsrqrdgsfgnynlvrRLVDLTILSRGQPYIAFSLAIVFLSLAGIPPLLGFLGKWFIL 497
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
7-263 |
2.17e-16 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 80.05 E-value: 2.17e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 7 LVFATSLLLGSTITISSNHWITAWAGLEINTLAILPLISKSHHP-RAIEAATKYFLVQAAASTLLLFS-SMTNAWDTGQW 84
Cdd:CHL00049 114 LLFVLTATLGGMFLCGANDLITIFVALECLSLCSYLLSGYTKKDvRSNEATMKYLLMGGASSSILVYGfSWLYGLSGGEI 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 85 DI---------TQLTCPASCTI----LTAAIAMKLGLAPFHFWFPEVLQGC-----------SLITGLLLSTAMkfppIT 140
Cdd:CHL00049 194 ELqeivnglinTQMYNSPGISIalifITVGIGFKLSLAPFHQWTPDVYEGSptpvvaflsvtSKVAASALATRI----FD 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 141 LLFMTSQSLNPTMLTLMAILSVALGGWTGLNQTQTRKILAFSSISHLGWMAAIII-------YSPKLALLNFYLYIMITA 213
Cdd:CHL00049 270 IPFYFSSNEWHLLLEILAILSMILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIvgdsndgYASMITYMLFYIFMNLGT 349
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 1998563114 214 AVFLTLNSIKT--LKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPK 263
Cdd:CHL00049 350 FACIVLFGLRTgtDNIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
50-263 |
1.49e-14 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 74.32 E-value: 1.49e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 50 PRAIEAATKYFLVQAAASTLLLFSS---------MTNAWDTGQWDITQLTCPA--SCTILTAAIAMKLGLAPFHFWFPEV 118
Cdd:PRK02504 157 PRSNEAALKYLLIGAASSAIFLYGSsllyglsggSTQLSAIALALITSPSLGLalALVFVIAGIAFKISAVPFHQWTPDV 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 119 LQGCSLITGLLLSTAMKFP----PITLLFMTSQSLNP---TMLTLMAILSVALGGWTGLNQTQTRKILAFSSISHLGW-M 190
Cdd:PRK02504 237 YEGSPTPVVAFLSVGSKAAgfalAIRLLVTAFPSFDEqwkLLFTALAILSMVLGNVVALAQTSMKRMLAYSSIGQAGFvM 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 191 AAIII-----YSPKLALLNFYLYIMITAAVFLTLNSIKT--LKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK02504 317 IGLVAgteagYASMVFYLLAYLFMNLGAFACVILFSLRTgtDQISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
49-267 |
8.59e-11 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 62.79 E-value: 8.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 49 HPRAIEAATKYFLVQAAASTLLLFSSMTNAWDTGQW-----DITQLTCPASCTILT-----AAIAMKLGLAPFHFWFPEV 118
Cdd:COG1008 156 GERRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfdiaELAAAPLPLTAQLLLflaffIAFAVKVPMFPFHTWLPDA 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 119 LQ-----GCSLITGLLLSTA----MKFPpITLLFMTSQSLNPTMLTLmAILSVALGGWTGLNQTQTRKILAFSSISHLGW 189
Cdd:COG1008 236 HVeaptaGSVLLAGVLLKMGgyglLRFA-LPLFPEASAYFAPLLAAL-GVIGIIYGALVALAQTDLKRLIAYSSVSHMGF 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 190 MAAIIiyspklALLNFY-----LYIM-----ITAAVFLTLNSI----KTLKLSTLMTTWAKTPSLSAMLMLTLLSLAGLP 255
Cdd:COG1008 314 VLLGI------FALNPLglqgaVLQMvshglITAALFLLVGVLydrtHTRDIADLGGLAKRMPVLAALFLLAALASLGLP 387
|
250
....*....|..
gi 1998563114 256 PLTGFLPKWLII 267
Cdd:COG1008 388 GTSGFVGEFLVL 399
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-283 |
3.52e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 61.05 E-value: 3.52e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFS-SMTNAwDTGQWDITQLT--CPASCTILTA------AIA 103
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGvGLLYG-VTGTLNMADLAgaLAENPTVVTAfgfvllALA 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 104 MKLGLAPFHFWFPEVLQGCS-LITGLLLSTAMK----------FPPITLLFMTSQSLNPTMLTLmAILSVALGGWTGLNQ 172
Cdd:PRK08375 214 LKAAVFPLHTWLPRAYPAAPpVVTALLSGLVTKvavyaliriyFTVFGGDFRFALGLGWLLAVL-ALLSMLVGSLAALGQ 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 173 TQTRKILAFSSISHLGWMAAIIIYSPKLALLNFYLYI-----------MITAAVFLTLNSIKTLKLSTLMTtwaKTPSLS 241
Cdd:PRK08375 293 DDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLlhhalmkgalfLAAGAIEVTYGTRRLSELSGLGR---RMPLTA 369
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1998563114 242 AMLMLTLLSLAGLPPLTGFLPKWLIIQE-LTKQEMATTAVIIA 283
Cdd:PRK08375 370 AAFAVASLSLIGVPPTSGFVSKWYLVVGaVEAGQWLVLAVLLA 412
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
50-268 |
7.44e-10 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 59.95 E-value: 7.44e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 50 PRAIEAATKYFLVQAAASTLLLFSSMTNAWDTGQW----DITQLTCPASC-TILTAAI----AMKLGLAPFHFWFPEV-- 118
Cdd:TIGR01972 152 PNRIYAAMKFFLYTLAGSLLMLLAILGLYFLGGGTfdllELLNLPLPFGVqTWLFLAFfiafAVKVPLFPLHTWLPDAhv 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 119 ---LQGCSLITGLLLSTA----MKFpPITLLFMTSQSLNPTMLTLmAILSVALGGWTGLNQTQTRKILAFSSISHLGWMa 191
Cdd:TIGR01972 232 eapTAGSVILAGVLLKMGtygfLRF-NLPLFPDASLYFAPVLAAL-GVIAIIYGALIALAQTDIKRLIAYSSISHMGFV- 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 192 AIIIYSPKLALLNFYLYIM-----ITAAVFLTLNSI----KTLKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLP 262
Cdd:TIGR01972 309 LLGIFSFNELGISGAVFQMishglITAALFLLVGVLyeraHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVG 388
|
....*.
gi 1998563114 263 KWLIIQ 268
Cdd:TIGR01972 389 EFLILL 394
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
81-263 |
1.84e-09 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 59.17 E-value: 1.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 81 TGQWDITQL-TCPASCTILTAAIAM-------KLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPITLL------FMTS 146
Cdd:PRK12644 184 AGTYRLSELlADPPTGPAVSVAVVLilvgalsKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVarlapgFADV 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 147 QSLNPTMLTLmAILSVALGGWTGLNQTQTRKILAFSSISHLGWMAAII-IYSPKLALLNFYLYI---MITAAVFLTLNSI 222
Cdd:PRK12644 264 PVWRPTVLVL-GLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVgIGTRDAALAGLAMLLahaLFKAALFLVVGII 342
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 1998563114 223 K----TLKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12644 343 DhstgTRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK 387
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
2.92e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 58.18 E-value: 2.92e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 33 LEINTLAILPLIS-KSHHPRAIEAATKYFLVQAAASTLLLFSSmtnAWDTGQWDITQLTCPAS-------------CTIL 98
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGI---ALLYGQYGTLNMAYLAVkmsenptvvakiaLALF 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 99 TAAIAMKLGLAPFHFWFPEVLQGC-SLITGLLLstAMKFPPITLLFMTSQSL-----NPT----MLTLMAILSVALGGWT 168
Cdd:PRK08376 227 IAGLAMKSGAVPVHMWLPDAYPAApSSISAMLL--VIKQAGLYALARVLFSIygpaiNLAtvgwVIIILGCLTMFVGVAM 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 169 GLNQTQTRKILAFSSISHLGWM-----AAIIIYSPKL-----------ALLNFYLYIMITAAVFLT----LNSIKTLKLS 228
Cdd:PRK08376 305 AVVQKDVKRLLAYHSVSQIGYMllglgVGLAALGDPAmasygeialagGIYHIVNHALYKALLFLTagavIYETGTRNLN 384
|
250 260 270
....*....|....*....|....*....|....*...
gi 1998563114 229 TLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK08376 385 ELGGLARTMPKTTIAFLIGAAAIVGLPPFNGFASKWLI 422
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
2-282 |
5.05e-09 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 57.70 E-value: 5.05e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 2 NPQAKLVFATSLLLGSTITISSNHWITAWAGLEINTLAILPLISKSHHpRAIEAATKYFLVQAAASTLLLFSSMTNAWDT 81
Cdd:PRK08668 96 NDAYFNMFALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMMVPMGKK-ESRKASLKYFVLSAIGAYAMLYAIFLIYAKT 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 82 GQWDIT-------QLTCPASCTI----LTAAIAMKLGLAPFHFWFPE-----------VLQGCSLITG---LLLSTAMkF 136
Cdd:PRK08668 175 GTFDFAdisqgliNDTSTGFALIvflfLLAFGVAKAGIFPLHVWAPDayseapqsfsaVLSGQLSKLGaygFLLVLYV-L 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 137 PPITLL-----FMTSQSLNPTMLTLMAIlSVALGGWTGLNQTQTRKILAFSSISHLGW-MAAIIIYSP---KLALLNFYL 207
Cdd:PRK08668 254 PGTKLFsefgtYRGVPLFNYILAWLGNI-SIIVGTLMAILQEDIKKLIAYSSVANGGYiLVGLGLGTSlgfAGGLFHVFN 332
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1998563114 208 YIMITAAVFLTLNSI----KTLKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMATTAVII 282
Cdd:PRK08668 333 HALFKGLFFLIFAAViyrtGTTKISEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGMPITAFMA 411
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
29-263 |
9.42e-09 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 56.98 E-value: 9.42e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 29 AWaglEINTLAILPLISKSHhPRAIEAATKYFLVQAAASTLLLFSSMTNAWDTGQWDITQ-LTCP--ASCTILTAAIAMK 105
Cdd:PRK12650 138 AW---ELVSLASFFLIARSG-SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTTSLSGiLHSDvwAEKPGLTTVVAVL 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 106 LGLA--------PFHFWFPEVLQGCSLITGLLLSTAMKFPPITLL--FMTSQSLNPT---MLTLMAILSVALGGWTGLNQ 172
Cdd:PRK12650 214 IAVAaftksaqfPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLlrFSPVFHDVAVwnwLLIIVGMITALMGAVFAVQK 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 173 TQTRKILAFSSISHLGWMAAII-IYSP---KLALLNFYLYIMITAAVFLTLNSIK----TLKLSTLMTTWAKTPSLSAML 244
Cdd:PRK12650 294 TDLKKLTAYSTVSQLGWIVATIgVGTPfalTAAVVHTLAHALFKSSLFMLIGVVDhqagTRDIRRLGSLWRRMPFTFVSV 373
|
250
....*....|....*....
gi 1998563114 245 MLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12650 374 TIAALSMAAVPPLFGFVSK 392
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-283 |
2.33e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 55.21 E-value: 2.33e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 2 NPQAKLVFATSLLLGSTITISSNhWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMTNAW-D 80
Cdd:PRK06589 115 SSRFLFFFNLTILIGVLIALSSD-LFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYtK 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 81 TGQWDITQLTCPASCTILTAAIAMKLGLA-----PFHFWFPEVLQG----CSLITGLLLSTAMKFPPITLLFMTSQSLNP 151
Cdd:PRK06589 194 TGNLDFVSGGLFSKNQSIILLLMFIYGIAktaifPVHSWLPAAMVAhypvSALLHAVIVVKTGLFCIYKILLYIFGLSYL 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 152 TM-------LTLMAILSVALGGWTGLNQTQTRKILAFSSISHLGW--MAAIIIYSPKLALLNFYL--YIMITAAVFLTLN 220
Cdd:PRK06589 274 QRifaefnwLIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLalLSAFILTPKALGAAILHLvsHSFAKICLFYSMG 353
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1998563114 221 SIKTLK----LSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQELTKQEMATTAVIIA 283
Cdd:PRK06589 354 SIYSLKkedqVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVM 420
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-281 |
8.18e-08 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 53.50 E-value: 8.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 34 EINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWDTGQWDITQ-----LTCPASCTILTAAIAMKLGL 108
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGFLLASTGTLNITDihnalLVNPTSPVIYGGLLLLIFGL 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 109 A------PFHFWFPEVLQGCSLITGLLLSTAMKFPPITL------LFMTSQSLNPTMLTLMA--ILSVALGGWTGLNQTQ 174
Cdd:PRK06277 210 LygsglpPFHTIKSDIYAKAKPFGSALLQTFSKFVLVALmlvifkLFGGLSYFPSAQGVLIAlsVLAMVFGVVMALLQTD 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 175 TRKILAFSSISHLGWMAAIII----YSPKLALLNFYLYIMITAAVFLTLNSI----KTLKLSTLMTTWAKTPSLSAMLML 246
Cdd:PRK06277 290 YKRLLAYHAISQGGYVAAGLAlgtpLGIVAGIFHAINHVIYKSALFLGAGIVsyrtKTSNLRKLGGLLPVMPVVAFMVLC 369
|
250 260 270
....*....|....*....|....*....|....*
gi 1998563114 247 TLLSLAGLPPLTGFLPKWLIIQELTKQEMATTAVI 281
Cdd:PRK06277 370 AKLAISGVPPFNGFQSKLMLAQAAMQANMPELAII 404
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
110-283 |
8.28e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 53.77 E-value: 8.28e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 110 PFHFWFPEVLQGCSLITGLLLSTAMKFPPITLLfmtsQSLNPTM---------LTLMAILSVALGGWTGLNQTQTRKILA 180
Cdd:PRK12647 213 PFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLL----ARLNPVLggtplwqtiLPLFGGLTMLTGALLAVRQTDLKLILA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 181 FSSISHLGWMAAIIIYSPKLALLNFYLYIMI----TAAVFLTLNSIK----TLKLSTLMTTWAKTPSLSAMLMLTLLSLA 252
Cdd:PRK12647 289 YSTVSALGTLVMLLGLGSELAIKAAVLFLVAhslyKGALFMVAGIIDhetgTRDITKLGGLRRAMPITAAAALLAALSMA 368
|
170 180 190
....*....|....*....|....*....|.
gi 1998563114 253 GLPPLTGFLPKWLIIQELTKQEMATTAVIIA 283
Cdd:PRK12647 369 GLPPLFGFLAKELIYEALLEAPLWSLILTVA 399
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
9-268 |
9.92e-08 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 53.40 E-value: 9.92e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 9 FATSLLLgstiTISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLV------QAAASTLLLFSS----MTNA 78
Cdd:PRK06458 117 FLFTMLL----ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASLEAAWKYIIIcsvgvaFALFGTILVYANaatvMGDG 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 79 WDTGQWdiTQLTCPASC---TILTAAIAM-------KLGLAPFHFWFPEV-LQGCS----LITGLLLSTAMkFPPITLLF 143
Cdd:PRK06458 193 EMAILW--TELLKHASLldpTLMKLAFVFlligfgtKVGLFPMHAWLPDAhSEAPSpvsaLLSGVLLNVAL-YAVLRYYI 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 144 MTSQSLNP----TMLTLMAILSVALGGWTGLNQTQTRKILAFSSISHLGWMA-AIIIYSP---KLALLNFYLYIMITAAV 215
Cdd:PRK06458 270 LIDAAIGSdfpgRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAfALGIGGPlgiFAALLHMLNHSLTKSAI 349
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1998563114 216 FLT----LNSIKTLKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK06458 350 FFAsgnvLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILT 406
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
140-268 |
1.61e-07 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 52.64 E-value: 1.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 140 TLLFMTSQSLNPTMLTLMAILSVALGGWTGLNQTQTRKILAFSSISHLGWMAAiiiyspKLALLN--------FYLY--I 209
Cdd:PRK12663 261 TLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILL------GLALGTpagingaiFYLVhdM 334
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1998563114 210 MITAAVFLTLNSIKTL----KLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12663 335 VVKTALFLIAGSLVRLtgyrSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQ 397
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-271 |
2.10e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 52.26 E-value: 2.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWDTGQWDITQLTC--PASCTILTAAIAMKLGLAP 110
Cdd:PRK07234 123 LEVLSIATFLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATadPEAFALIALGLLVKGGIFV 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 111 FHFWFPEVLQGCSLITGLLLSTAMK----FPPITLLFMTSQSLNPtmLTLMAILSVALGGWTGLNQTQTRKILAFSSISH 186
Cdd:PRK07234 203 SGLWLPLTHSEAEPPVSALLSGVVVkagvFPLVRCALDVPGLDLI--VRIFGVGTALLGVLFALLEKDLKRMLAFSTISQ 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 187 LGWmaaiIIYSPKLALLNFYLYIMITAAVFLTLNSIKTLKLSTLMTTWAKTpSLSAMLMLTLLSLAGLPPLTGFLPKWLI 266
Cdd:PRK07234 281 LGF----ILAAPLVGGLYALAHGLVKSTLFLCAGALPSRNFTELISQMLGI-GKWIPLTMASFSIAGFPLLAGFVSKVLT 355
|
....*
gi 1998563114 267 IQELT 271
Cdd:PRK07234 356 LKNLL 360
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-267 |
3.55e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 51.66 E-value: 3.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFS-----SMTNAWDTGQWDITQLTCPASCTI------LTAA 101
Cdd:PRK12662 139 LEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIGigflyAITGTLNMGDMFLIIQDLPTNRAIqigvlfIMVG 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 102 IAMKLGLAPFHFWFPEVLQGC-SLITGLLLSTAMK-----FPPI------TLLFMTSQSLNPTMLTLmAILSVALGGWTG 169
Cdd:PRK12662 219 LFIKAALFPFHKWLIQAYSEApSFISVFFSGTSTKvmiylIIRIvydvfkANFVFTTLPFNNVFMIL-AALAIVFGSVLA 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 170 LNQTQTRKILAFSSISHLGWMAAIIIYSPKLALLNFYLYI----MITAAVFLTLNSIK----TLKLSTLMTTWAKTPSLS 241
Cdd:PRK12662 298 ILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIvnhsIVKSALFMVSGSISyhfgTTKLEDCLNLWKSMPKIT 377
|
250 260
....*....|....*....|....*.
gi 1998563114 242 AMLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:PRK12662 378 LAFVLLSLSLIGMPPTSGFVAKWYIL 403
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
50-267 |
1.68e-06 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 49.43 E-value: 1.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 50 PRAIEAATKYFLVQAAASTLLLFSSMT----NAWDTGQWDITQL-TCPASCTILT-------AAIAMKLGLAPFHFWFPE 117
Cdd:PRK05846 157 KNRIYAATKFFLYTLLGSLLMLVAIIYlvvvYYNATGTFDIADLlNLPLPPGVQYwlflaffIAFAVKMPMFPLHTWLPD 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 118 VLQ-----GCSLITGLLLSTA----MKFPpITLLFMTSQSLNPTMLTLmAILSVALGGWTGLNQTQTRKILAFSSISHLG 188
Cdd:PRK05846 237 AHVqaptaGSVLLAGILLKMGayglLRFS-LPLFPDASHEFAPIIITL-GVIAIIYGALVALAQTDIKKLIAYSSISHMG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 189 WMaAIIIYSPKLALLNFYLYIMI-----TAAVFLTLNSI----KTLKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTG 259
Cdd:PRK05846 315 FV-TLGIFAGNQLGIQGAIFQMIshglsSAALFLLVGVLydrlHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSG 393
|
....*...
gi 1998563114 260 FLPKWLII 267
Cdd:PRK05846 394 FVGEFLIL 401
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
82-268 |
2.16e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 49.38 E-value: 2.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 82 GQWDITQLTCPASCTILTAAI---AM-KLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPITLL-----FMTSQSLNPT 152
Cdd:MTH00207 165 GHWSITNMWQTDMNNYIALSImiaAMtKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLirfypFLSSTYWFNP 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 153 MLTLMAILSVALGGWTGLNQTQTRKILAFSSISHLG-WMAAIIIYSPKLALLNFYLYIMITAAVFLTLNSI-----KTLK 226
Cdd:MTH00207 245 ALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGvMMASLGLGMPKLALFHLITHALFKALLFVCAGSLihshhHSQD 324
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1998563114 227 LSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:MTH00207 325 LRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILE 366
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
103-268 |
3.56e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 48.41 E-value: 3.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 103 AMKLGLAPFHFWFPEVLQG-----CSLITGLLlsTAMKFPPI----TLLFMTSQSLNPTMLTLMAILSVALGGWTGLNQT 173
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAppiaiAALFGALL--TKVGVYAIartfTLFFSHDTSFTHYLILILALLTIIFGVIGAVAYF 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 174 QTRKILAFSSISHLGWMAAIIIYSPKLALLNFYLYIM----ITAAVFLTLNSIKTL-------KLSTLMTTWaktPSLSA 242
Cdd:PRK07691 298 DIKKIIIYNIMIAVGVILVGVAMMTESGMIGAIYYLIhdmiVKAALFLLIGIMIKItgttdlkKMGGLIKRY---PVLGW 374
|
170 180
....*....|....*....|....*.
gi 1998563114 243 MLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07691 375 MFFIAALSLAGIPPLSGFYGKFFIVE 400
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
105-271 |
4.36e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 48.42 E-value: 4.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 105 KLGLapfHFWFPEVLQGCSLITGLLLSTAMKFPPITLLFMTSQSLNPTMLTLMAI-----LSVALGGWTGLNQTQTRKIL 179
Cdd:MTH00032 241 QLGL---HTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIItifgaLTAFFAATVGLVQNDLKKVI 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 180 AFSSISHLGWMAAIIIY--SPKLALLNFYLYIMITAAVFLTLNSI---------KTLKLSTLMTTwakTPSLSAMLMLTL 248
Cdd:MTH00032 318 AYSTCSQLGYMVLIIGIegSHNVGLFHLVNHAFFKALLFLSAGSVihsttvdeqDMRKMGGLIHS---IPFTYTMMLIGS 394
|
170 180
....*....|....*....|...
gi 1998563114 249 LSLAGLPPLTGFLPKWLIIqELT 271
Cdd:MTH00032 395 FSIMGLPYLTGFYSKDLIL-ELT 416
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
33-267 |
7.62e-06 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 47.28 E-value: 7.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 33 LEINTLAILPLISKSHHPRAIEAATKYFLVQAAASTLLLFSSMTNAWDTGQWDITQLTCPASCT-------ILTAAIAMK 105
Cdd:PRK06525 142 FEITGLCSWALISYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLkylvflgILFAAWGKS 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 106 LGLaPFHFWFPEVLQGCSLITGLLLSTAMKFPPITLLFMTSQSLNP------TMLTLMAILSVALGGWTGLNQTQTRKIL 179
Cdd:PRK06525 222 AQL-PFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPiphvigYVGAVMAIVTLLYGFLMYLPQQDMKRLL 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 180 AFSSISHLGWM---AAIIIYSPKLALLNFYLYIMITAAV----FLTLNSIK----TLKLSTLMTTWAKTPSLSAMLMLTL 248
Cdd:PRK06525 301 AYSTITQLGYMffgLSLAILGSRLALEGSIAYIFNHAFAkslfFLVAGALSyscgTRLLPRLRGVLKKLPLVGVGFCVAA 380
|
250
....*....|....*....
gi 1998563114 249 LSLAGLPPLTGFLPKWLII 267
Cdd:PRK06525 381 LAITGVPPFNGFFSKFPIF 399
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
48-270 |
1.23e-05 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 47.07 E-value: 1.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 48 HHPRAIEAATKYFLVQAAASTLLLFSSMTNAWDTGQWDITQL-----TCPASCTILTAAIAM------KLGLAPFHFWFP 116
Cdd:COG1009 156 EKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELlaaapTILSSPLLTLILLLLllgafgKSAQFPLHFWLP 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 117 EVLQGCSLITGLLLSTAM---------KFPPITllfmtsqSLNPTMLTLMAILSVA---LGGWTGLNQTQTRKILAFSSI 184
Cdd:COG1009 236 DAMEGPTPVSALLHAATMvkagvyllaRLSPLF-------ALSPVWLTVVAIIGAItalFAALIALAQTDIKRVLAYSTV 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 185 SHLGWM-AAIIIYSPKLALlnFYLyimITAAVF---LTLNS---IKTL------KLSTLmttWAKTPSLSAMLMLTLLSL 251
Cdd:COG1009 309 SQLGYMfLALGVGAYVAAL--FHL---LTHAFFkalLFLGAgsvIHATgtrdirKMGGL---RKKMPITAITFLIGALSL 380
|
250
....*....|....*....
gi 1998563114 252 AGLPPLTGFLPKWLIIQEL 270
Cdd:COG1009 381 AGIPPFAGFFSKEAILEAA 399
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
111-268 |
1.25e-05 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 46.99 E-value: 1.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 111 FHFWFPEVLQGCSLITGLLLSTAMKFPPITLLFMTSQ--SLNPTMLTLMAI---LSVALGGWTGLNQTQTRKILAFSSIS 185
Cdd:MTH00020 229 LHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPlfEQAPLALIIVTIvgsLTVFFAATVGLVQNDLKKVIAYSTCS 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 186 HLGWMAAII-IYSPKLALLNFYLYIMITAAVFLTLNSI--------KTLKLSTLMTTwakTPSLSAMLMLTLLSLAGLPP 256
Cdd:MTH00020 309 QLGYMVVACgLSHYSISLFHLMNHAFFKALLFLSAGSVihalsdeqDMRKMGGLISF---LPLTYIFFLIGSLSLMGFPY 385
|
170
....*....|..
gi 1998563114 257 LTGFLPKWLIIQ 268
Cdd:MTH00020 386 LTGFYSKDLILE 397
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
101-267 |
1.56e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 46.45 E-value: 1.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 101 AIAMKLGLAPFHFWFPEV-----LQGCSLITGLLLSTA------MKFPpitLLFMTSQSLNPTMLTlMAILSVALGGWTG 169
Cdd:MTH00226 239 AMAVKIPIFPFHIWLPKAhveapVAGSVLLAGILLKLGgyglvrLSWP---ILPLGAQNLAPAVIA-MGIVGIVYGSFAT 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 170 LNQTQTRKILAFSSISHLGwMAAIIIYSPKLALLNFYLYIM----ITAAVFLTLNSIKTLKLSTLMTTWAKTPSLS---- 241
Cdd:MTH00226 315 CRQIDVKRLVAYSSVAHMG-LVSITLVTHDIIGLTGSIFIMlahgIVSSLLFILVTILYDRHHTRLIKYYRGLSITmpiw 393
|
170 180
....*....|....*....|....*..
gi 1998563114 242 -AMLMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00226 394 gTIMIVTSLANVAVPPSGNFIGEYLSI 420
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
110-272 |
1.94e-05 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 46.29 E-value: 1.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 110 PFHFWFPEVLQGCSLITGLLLSTAMKFPPITLLFMTSQSLNPT-----MLTLMAILSVALGGWTGLNQTQTRKILAFSSI 184
Cdd:PRK12646 228 PFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSnmyiyIVTFVGLITMLFGSITALKQWDLKGILAYSTI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 185 SHLGWMAAII------IYSPKLALLNFYLYIMITA------------AVFLTLNSIK----TLKLSTLMTTWAKTPSLSA 242
Cdd:PRK12646 308 SQLGMIMAMVgigggyAQHQQDAIASIYVFVLFAAlfhlmnhaifkcALFMGVGIIDheagTRDIRILSGMRQLFPKMNL 387
|
170 180 190
....*....|....*....|....*....|
gi 1998563114 243 MLMLTLLSLAGLPPLTGFLPKWLIIQELTK 272
Cdd:PRK12646 388 VMTIAALSMAGVPFLNGFLSKEMFLDALTQ 417
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
295-340 |
1.94e-05 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 41.47 E-value: 1.94e-05
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 1998563114 295 RLAYCATITLPPHTTNHMKQWHTNKPVNTT-VAVLVTMSIALLPMSP 340
Cdd:pfam06444 5 RLSYSTTLTLFPNTNNSKMKWRFNSTKNTLlLPTLTTLSILLLPLTP 51
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-270 |
3.87e-05 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 45.13 E-value: 3.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 13 LLLGSTITISSNHWITAWAGLEINTLAILPLISKSHHPRAIEAATKYFLVQAAA------STLLLFSSMTNAWDTGQWDI 86
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAmifafiGLIFLFSLTRQALGTGTLNW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 87 TQLTCPA---SCTILTAA-------IAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPITLLFMTSQSLNPT---- 152
Cdd:PRK08676 191 TELAAHAsllSPSVLGASflfifigFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSgaae 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 153 ----MLTLMAILSVALGGWTGLNQTQTRKILAFSSISHLGWMAAIIIYSPKLALLNFYLYIMITAAVFLTL--------N 220
Cdd:PRK08676 271 qfsnVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLffsagilhR 350
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1998563114 221 SIKTLKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK08676 351 QYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQL 400
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
140-268 |
8.94e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 44.19 E-value: 8.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 140 TLLFmTSQSLNpTMLTLMAILSVALGGWTGLNQTQTRKILAFSSISHLGWMAAIIIYSPKLALLNFYLY----IMITAAV 215
Cdd:PRK12665 264 TLLF-PGGGLD-TLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYvahhITVQTTL 341
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 1998563114 216 FLTLNSIK----TLKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK12665 342 FLVVGLIErqagSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLE 398
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
55-266 |
2.19e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 42.76 E-value: 2.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 55 AATKYFLVQAAASTLLLFSSMTNAWDTG--QWDITQL---TCPASCTILTAA-----IAMKLGLAPFHFWFPEVLQGCS- 123
Cdd:PRK06473 158 AATKFLLYTAISGILILVSFLGLVWLSGasSFDYEPLrshTLPLSTQLLLLApilvgFGIKIPLVPFHTWLPDAHVEASt 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 124 ----LITGLLLSTA----MKFPpITLLFMTSQSLNPTMLTLmAILSVALGGWTGLNQTQTRKILAFSSISHLGWMAAIII 195
Cdd:PRK06473 238 pvsvLLAGVLLKLGtyglLRFG-VGLFPEAWVYLAPWLATW-AVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 196 YSPKLALLNFYLYIM----ITAAVFLTL-------NSIKTLKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKW 264
Cdd:PRK06473 316 AATPLSILAAVFQMIshglISALLFLLVgvvykktGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIPGMVGFIAEF 395
|
..
gi 1998563114 265 LI 266
Cdd:PRK06473 396 LV 397
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
96-268 |
2.53e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 42.78 E-value: 2.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 96 TILTAAIAMKLGLAPFHFWFPEVLQGCSLITGLLLSTAM-KFPPITL------LFMTSQSLNPTMLTLMAILSVALGGWT 168
Cdd:PRK07363 209 TGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLaKLGTYGLlrfglqLFPQTWSLVAPGLAIIGTISVIYGALS 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 169 GLNQTQTRKILAFSSISHLGW----------------MAAIIIYSPKLALLnFYLYIMITAAVfltlNSIKTLKLSTLMT 232
Cdd:PRK07363 289 AIAQKDIKRMVAYSSIGHMGYilvaaaagtqlsllgaVAQMISHGLILALL-FHLVGIVERKV----GTRDLDVLNGLMN 363
|
170 180 190
....*....|....*....|....*....|....*.
gi 1998563114 233 TWAKTPSLSAMLMLTLLSLAGLPPLTGFLPKWLIIQ 268
Cdd:PRK07363 364 PIRGLPLTSALLVLAGMASAGIPGLVGFVAEFIVFQ 399
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
48-263 |
4.29e-04 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 42.12 E-value: 4.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 48 HHPRAIEAATKYFLVQAAASTLLLFSSMTNAWDTGQWDITQL--------TCPASCTILTAAIAMKLGLA------PFHF 113
Cdd:PRK12649 156 HRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIATIlqdselieNIKGHPLFLITLILIFIGAAaksaqgPFYI 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 114 WFPEVLQGCSLITGLLLSTAMKFPPITLLFMTSQSLNPT-----MLTLMAILSVALGGWTGLNQTQTRKILAFSSISHLG 188
Cdd:PRK12649 236 WLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTeawfiLVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLA 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 189 WMAAIIIYSPK------LALLNFYL--YIMITAAVFLTLNSIK----TLKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPP 256
Cdd:PRK12649 316 YLMTMYGYTTYhepglgVAAATFHLlnHATFKACLFLVAGIVAheaaTRDIRKLGGLRKEMPITFIVASIAALAMAGIPP 395
|
....*..
gi 1998563114 257 LTGFLPK 263
Cdd:PRK12649 396 LNGFLSK 402
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-278 |
6.33e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 41.56 E-value: 6.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 55 AATKYFLVQAAASTLLLFSSMTNAW--DTGQWDITQLTC---PASCTILT-----AAIAMKLGLAPFHFWFPEVLQGCS- 123
Cdd:PRK12561 138 AATKFILYTALASIFILVAGLALALsgDTFTFDLAELGAksyPLALELLLyagflIAFGVKLPIFPLHTWLPDAHGEASa 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 124 ----LITGLLLstamKFPPITLLFMTSQSLNPT------MLTLMAILSVALGGWTGLNQTQTRKILAFSSISHLGW---- 189
Cdd:PRK12561 218 pvsmILAGVLL----KMGGYALIRFNVQMLPDAhvyfapALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFvllg 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 190 MAAIIIYSPKLALLNFYLYIMITAAVFL----TLNSIKTLKLSTLMTTWAKTPSLSAM-LMLTLLSLAgLPPLTGFLPKW 264
Cdd:PRK12561 294 IAAFTDLGISGAMLQMISHGLIAAALFFltgvTYERTHTLSIPNMGGLAKVMPKTFALfTASSMASLA-LPGMSGFVSEL 372
|
250
....*....|....
gi 1998563114 265 LIIQELTKQEMATT 278
Cdd:PRK12561 373 TVFLGITSSDVYSS 386
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
59-270 |
7.58e-04 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 41.25 E-value: 7.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 59 YFLVQAAASTLLLFSSMTNAW-DTGQWDITQLTCPA-----SCTILTAAIAMKLGLAPFHFWFPEVLQGC-----SLITG 127
Cdd:PRK08667 166 FYFVMTQLSTVFLMLGIIVLFiQTGSFELSPLGASAgilslVFLLLFLGFGIKAGIIPFHKWLPYAHPASpsnvsALMSG 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 128 LLLSTAMKFPPITLLFMTSQSLNPTMLTLMA-ILSVALGGWTGLNQTQTRKILAFSSISHLGW-MAAIIIY-------SP 198
Cdd:PRK08667 246 VMLKVAVYGLVRFLMDVLSPELWWGVLILLAgSISALLGVIYALKEHDLKGLLAYSSIENIGIiLMGIGLYvifgvygLD 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 199 KLALLNfylyimITAAVFLTLN-----------------SIKTLKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGFL 261
Cdd:PRK08667 326 TLALLA------LGGALFHSLNhalfksllfltagsvvhATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFA 399
|
....*....
gi 1998563114 262 PKWLIIQEL 270
Cdd:PRK08667 400 SELLLYESF 408
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
15-270 |
9.77e-04 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 40.93 E-value: 9.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 15 LGSTITISSNHWITAWAGLEINTLA---ILPLISKSHHPRAIeaatkyFLVQAAASTLLLFSSMTNAW-DTGQWDITQLT 90
Cdd:PRK06459 83 LGMAIVLTSDNYLLFLAGWEIMTIPsyvAIALTKKNKRPAFV------FMAFGELSTVLILAGFAWAFiISGTTNFSYLP 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 91 CPASCTILTAAIAMKLGLAPFHF--WFPEVLQGCSLITGLLLSTAMK----FPPITLLFMTSQS-LNPTMLTLMAI--LS 161
Cdd:PRK06459 157 SPVPLILASFGFIIKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTlmgvYGILKMTILTQTIpIGYFGLTILAIgaFS 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 162 VALGGWTGLNQTQTRKILAFSSISHLGWMAA-----IIIYSPKLALLNFYLYIMITAAVFLTLN------SIKTLKLSTL 230
Cdd:PRK06459 237 ILFGALYAYVSENVKGLLAFSTIENNGAILValglyMVTKQLITSIEHFSLITVILYSFAHSVAktglflSSGLQEKQSI 316
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1998563114 231 MTTWAKTPSLSAM-LMLTLLSLAGLPPLTGFLPKWLIIQEL 270
Cdd:PRK06459 317 TYSKKIRNRWIELgLTLLASSLSGLLPNIGGVASWLLLESL 357
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
111-266 |
2.03e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 39.95 E-value: 2.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 111 FHFWFPEVLQGCSLITGLLLSTAMKFPPITLLFMTSQSLNPTMLTLMAILsvALGGWTGL-------NQTQTRKILAFSS 183
Cdd:MTH00208 255 LHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCL--ILGSLTALfaastaiSQHDIKKIIAYST 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 184 ISHLGWMA-AIIIYSPKLALLNFYLYIMITAAVFLTLNSI-----------KTLKLSTLMttwaktPSLSAMLMLTLLSL 251
Cdd:MTH00208 333 TSQLGLMVvAIGLNQPNLALFHICTHAFFKAMLFLCSGSIihslnneqdlrKMGGLSFLL------PVTSSCIILGSLAL 406
|
170
....*....|....*
gi 1998563114 252 AGLPPLTGFLPKWLI 266
Cdd:MTH00208 407 MGTPFLAGFYSKDLI 421
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
110-263 |
2.36e-03 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 39.91 E-value: 2.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 110 PFHFWFPEVLQGCSLITGLLLSTAM---------KFPPItllFMTSQSLNPTmLTLMAILSVALGGWTGLNQTQTRKILA 180
Cdd:PRK12645 228 PFYIWLPDAMEAPTPVSAYLHSATMvkagiylvaRFTPI---FAGSQVWFWT-VTLVGLITLFWGSLNAVKQTDLKGILA 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 181 FSSISHLGW-MAAIIIYSPKL---ALLNFYLYIMITAAVFLTLN----------------------SIKtlKLSTLMTTW 234
Cdd:PRK12645 304 FSTVSQLGLiMSLLGIGAASLhyqGDDSKIYAAAITAAIFHLINhatfkgslfmivgivdhetgtrDIR--KLGGLMTIM 381
|
170 180
....*....|....*....|....*....
gi 1998563114 235 AKTPSLSAmlmLTLLSLAGLPPLTGFLPK 263
Cdd:PRK12645 382 PITFTIAL---IGALSMAGLPPFNGFLSK 407
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
112-268 |
4.27e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 39.07 E-value: 4.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 112 HFWFPEVLQGCSLITGLLLSTAMKFPPITLL--FMTSQSLNPTMLTLMailsVALGGWT-------GLNQTQTRKILAFS 182
Cdd:MTH00108 230 HPWLPSAMEGPTPVSALLHSSTMVVAGVFLLirFHPLMENNKTIQTLT----LCLGAITtlftaicALTQNDIKKIVAFS 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 183 SISHLGWMAAII-IYSPKLALLNFYLYIMITAAVFLTLNSI--------KTLKLSTLMTTwakTPSLSAMLMLTLLSLAG 253
Cdd:MTH00108 306 TSSQLGLMMVTIgINQPHLAFLHICTHAFFKAMLFMCSGSIihnlndeqDIRKMGGLFKT---LPFTSTALIIGSLALTG 382
|
170
....*....|....*
gi 1998563114 254 LPPLTGFLPKWLIIQ 268
Cdd:MTH00108 383 MPFLTGFYSKDLIIE 397
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
97-267 |
5.55e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 38.39 E-value: 5.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 97 ILTAAIAmKLGLAPFHFWFPEVLQGCSLITGLLLSTAMKFPPITLLFMTSQSLNPTMLTLMAILSVA-----LGGWTGLN 171
Cdd:MTH00211 210 LLLAAMG-KSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGaltmlFGALCALT 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 172 QTQTRKILAFSSISHLGWMA-AIIIYSPKLALLNFYLYIMITAAVFL-------TLNSIKTLKlsTLMTTWAKTPSLSAM 243
Cdd:MTH00211 289 QNDIKKIVAFSTTSQLGLMMvTLGLNQPQLAFLHICTHAFFKAMLFMcsgsiihGLNNEQDIR--KMGGLSKNLPFTSSC 366
|
170 180
....*....|....*....|....
gi 1998563114 244 LMLTLLSLAGLPPLTGFLPKWLII 267
Cdd:MTH00211 367 LFLGSLALMGFPFLSGFFSKDLIL 390
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
110-268 |
7.80e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 38.09 E-value: 7.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 110 PFHFWFPEVLQGCSLITGLLLSTAMKFPPITLLFMTSQSLNPT-----MLTLMAILSVALGGWTGLNQTQTRKILAFSSI 184
Cdd:MTH00209 193 PFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSpffsmSLLLLGSLTTLMASMSANVESDLKKIIALSTL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 185 SHLGWMAAII-IYSPKLALLNFYLYIMITAAVFLTLNSI-----KTLKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLT 258
Cdd:MTH00209 273 SQLGLMMCSLgLNQPELAFFHLITHALFKALLFICAGNIihshgHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLA 352
|
170
....*....|
gi 1998563114 259 GFLPKWLIIQ 268
Cdd:MTH00209 353 GFYSKDLILE 362
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
55-260 |
9.59e-03 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 37.76 E-value: 9.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 55 AATKYFLVQAAASTLLLFSSMTNAW--DTGQWDIT-----------QLTCPASCTIltaAIAMKLGLAPFHFWFPEVLQG 121
Cdd:PRK02546 166 AATKFILYTAGSSLFILLAALAMAFygDTPTFDMTalaakdfglgfQLLCYAGLLI---AYGVKLPIVPLHTWLPDAHGE 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1998563114 122 CS-----LITGLLLstamKFPPITLLFMTSQSLnPTMLTLMAILSVALG-------GWTGLNQTQTRKILAFSSISHLGW 189
Cdd:PRK02546 243 ATapvhmLLAGILL----KMGGYALLRMNAGML-PDAHAQFAPLLIVLGvvniiyaALTSFAQRNLKRKIAYSSISHMGF 317
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1998563114 190 ----MAAIIIYSPKLALLNFYLYIMITAAVFL----TLNSIKTLKLSTLMTTWAKTPSLSAMLMLTLLSLAGLPPLTGF 260
Cdd:PRK02546 318 vligIGSFTDLGTSGAMLQMISHGLIGASLFFlvgaTYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGF 396
|
|
| |
