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Conserved domains on  [gi|1023946303|gb|KZV13488|]
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lectin-like cell wall protein (flocculin) involved in flocculation [Saccharomyces cerevisiae]

Protein Classification

PA14 and Flocculin_t3 domain-containing protein( domain architecture ID 11169150)

PA14 and Flocculin_t3 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PA14 pfam07691
PA14 domain; This domain forms an insert in bacterial beta-glucosidases and is found in other ...
120-251 2.90e-28

PA14 domain; This domain forms an insert in bacterial beta-glucosidases and is found in other glycosidases, glycosyltransferases, proteases, amidases, yeast adhesins, and bacterial toxins, including anthrax protective antigen (PA). The domain also occurs in a Dictyostelium prespore-cell-inducing factor Psi and in fibrocystin, the mammalian protein whose mutation leads to polycystic kidney and hepatic disease. The crystal structure of PA shows that this domain (named PA14 after its location in the PA20 pro-peptide) has a beta-barrel structure. The PA14 domain sequence suggests a binding function, rather than a catalytic role. The PA14 domain distribution is compatible with carbohydrate binding.


:

Pssm-ID: 400161 [Multi-domain]  Cd Length: 141  Bit Score: 110.92  E-value: 2.90e-28
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1023946303  120 IIAYWSTDLFGFYTTPTNVTLEMTGYFLPPQTGSYTFKFAtVDDSAILSVGGNVAFECCAQEQPPITSTdftisgikqwn 199
Cdd:pfam07691   28 NTFYWDTDVPGFGEAPGDFSARWTGYLLPPESGTYTFGVA-SDDGARLWIDGELVIDNWGQHPPDASPE----------- 95
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1023946303  200 esppdnITGTVYMYAGFYYPMKIVYSNAVAWGTLPISVTLPDGTTVSDDFEG 251
Cdd:pfam07691   96 ------ESNTLYLVAGKLYPIRIEYFHAGTGGSVQLSWTSPDGGGEEIDEDG 141
Flocculin_t3 pfam13928
Flocculin type 3 repeat; This repeat is found in the Flocculation protein FLO9 close to its ...
844-885 2.57e-04

Flocculin type 3 repeat; This repeat is found in the Flocculation protein FLO9 close to its C-terminus.


:

Pssm-ID: 464047 [Multi-domain]  Cd Length: 44  Bit Score: 39.48  E-value: 2.57e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1023946303  844 LVTVTSCESHVCTESISSAIVSTATVTVSGATTEYTTWCPIS 885
Cdd:pfam13928    3 VITITSCSDDKCHETTVTTGVSTVTTTVNGVVTVYTTYCPLT 44
Flocculin_t3 pfam13928
Flocculin type 3 repeat; This repeat is found in the Flocculation protein FLO9 close to its ...
965-1008 1.19e-03

Flocculin type 3 repeat; This repeat is found in the Flocculation protein FLO9 close to its C-terminus.


:

Pssm-ID: 464047 [Multi-domain]  Cd Length: 44  Bit Score: 37.55  E-value: 1.19e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 1023946303  965 TTLVTVTSCESGVCSETASPAIVSTATATVNDVVTVYPTWRPQT 1008
Cdd:pfam13928    1 TTVITITSCSDDKCHETTVTTGVSTVTTTVNGVVTVYTTYCPLT 44
Flocculin_t3 pfam13928
Flocculin type 3 repeat; This repeat is found in the Flocculation protein FLO9 close to its ...
919-957 6.37e-03

Flocculin type 3 repeat; This repeat is found in the Flocculation protein FLO9 close to its C-terminus.


:

Pssm-ID: 464047 [Multi-domain]  Cd Length: 44  Bit Score: 35.63  E-value: 6.37e-03
                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 1023946303  919 ISSCESDVCSKTASPAIVSISTATINGVTTEYTTWCPIS 957
Cdd:pfam13928    6 ITSCSDDKCHETTVTTGVSTVTTTVNGVVTVYTTYCPLT 44
 
Name Accession Description Interval E-value
PA14 pfam07691
PA14 domain; This domain forms an insert in bacterial beta-glucosidases and is found in other ...
120-251 2.90e-28

PA14 domain; This domain forms an insert in bacterial beta-glucosidases and is found in other glycosidases, glycosyltransferases, proteases, amidases, yeast adhesins, and bacterial toxins, including anthrax protective antigen (PA). The domain also occurs in a Dictyostelium prespore-cell-inducing factor Psi and in fibrocystin, the mammalian protein whose mutation leads to polycystic kidney and hepatic disease. The crystal structure of PA shows that this domain (named PA14 after its location in the PA20 pro-peptide) has a beta-barrel structure. The PA14 domain sequence suggests a binding function, rather than a catalytic role. The PA14 domain distribution is compatible with carbohydrate binding.


Pssm-ID: 400161 [Multi-domain]  Cd Length: 141  Bit Score: 110.92  E-value: 2.90e-28
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1023946303  120 IIAYWSTDLFGFYTTPTNVTLEMTGYFLPPQTGSYTFKFAtVDDSAILSVGGNVAFECCAQEQPPITSTdftisgikqwn 199
Cdd:pfam07691   28 NTFYWDTDVPGFGEAPGDFSARWTGYLLPPESGTYTFGVA-SDDGARLWIDGELVIDNWGQHPPDASPE----------- 95
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1023946303  200 esppdnITGTVYMYAGFYYPMKIVYSNAVAWGTLPISVTLPDGTTVSDDFEG 251
Cdd:pfam07691   96 ------ESNTLYLVAGKLYPIRIEYFHAGTGGSVQLSWTSPDGGGEEIDEDG 141
PA14 smart00758
domain in bacterial beta-glucosidases other glycosidases, glycosyltransferases, proteases, ...
122-250 8.04e-21

domain in bacterial beta-glucosidases other glycosidases, glycosyltransferases, proteases, amidases, yeast adhesins, and bacterial toxins;


Pssm-ID: 214807 [Multi-domain]  Cd Length: 136  Bit Score: 89.77  E-value: 8.04e-21
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1023946303   122 AYWSTDLFGFYTTPTNVTLEMTGYFLPPQTGSYTFKFaTVDDSAILSVGGNVAFECCaqeqppitstdftisgikqWNES 201
Cdd:smart00758   28 FYWDSDKFGEGEKADNFSVRWTGYLKPPEDGEYTFSI-TSDDGARLWIDGKLVIDNW-------------------GKHE 87
                            90       100       110       120
                    ....*....|....*....|....*....|....*....|....*....
gi 1023946303   202 PPDNITGTVYMYAGFYYPMKIVYSNAVAWGTLPISVTLPDGTTVSDDFE 250
Cdd:smart00758   88 ARPSTSSTLYLLAGGTYPIRIEYFEAGTGGLLKLGWTTPDAAKEAIDDE 136
Flocculin_t3 pfam13928
Flocculin type 3 repeat; This repeat is found in the Flocculation protein FLO9 close to its ...
844-885 2.57e-04

Flocculin type 3 repeat; This repeat is found in the Flocculation protein FLO9 close to its C-terminus.


Pssm-ID: 464047 [Multi-domain]  Cd Length: 44  Bit Score: 39.48  E-value: 2.57e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1023946303  844 LVTVTSCESHVCTESISSAIVSTATVTVSGATTEYTTWCPIS 885
Cdd:pfam13928    3 VITITSCSDDKCHETTVTTGVSTVTTTVNGVVTVYTTYCPLT 44
Flocculin_t3 pfam13928
Flocculin type 3 repeat; This repeat is found in the Flocculation protein FLO9 close to its ...
965-1008 1.19e-03

Flocculin type 3 repeat; This repeat is found in the Flocculation protein FLO9 close to its C-terminus.


Pssm-ID: 464047 [Multi-domain]  Cd Length: 44  Bit Score: 37.55  E-value: 1.19e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 1023946303  965 TTLVTVTSCESGVCSETASPAIVSTATATVNDVVTVYPTWRPQT 1008
Cdd:pfam13928    1 TTVITITSCSDDKCHETTVTTGVSTVTTTVNGVVTVYTTYCPLT 44
Flocculin_t3 pfam13928
Flocculin type 3 repeat; This repeat is found in the Flocculation protein FLO9 close to its ...
919-957 6.37e-03

Flocculin type 3 repeat; This repeat is found in the Flocculation protein FLO9 close to its C-terminus.


Pssm-ID: 464047 [Multi-domain]  Cd Length: 44  Bit Score: 35.63  E-value: 6.37e-03
                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 1023946303  919 ISSCESDVCSKTASPAIVSISTATINGVTTEYTTWCPIS 957
Cdd:pfam13928    6 ITSCSDDKCHETTVTTGVSTVTTTVNGVVTVYTTYCPLT 44
 
Name Accession Description Interval E-value
PA14 pfam07691
PA14 domain; This domain forms an insert in bacterial beta-glucosidases and is found in other ...
120-251 2.90e-28

PA14 domain; This domain forms an insert in bacterial beta-glucosidases and is found in other glycosidases, glycosyltransferases, proteases, amidases, yeast adhesins, and bacterial toxins, including anthrax protective antigen (PA). The domain also occurs in a Dictyostelium prespore-cell-inducing factor Psi and in fibrocystin, the mammalian protein whose mutation leads to polycystic kidney and hepatic disease. The crystal structure of PA shows that this domain (named PA14 after its location in the PA20 pro-peptide) has a beta-barrel structure. The PA14 domain sequence suggests a binding function, rather than a catalytic role. The PA14 domain distribution is compatible with carbohydrate binding.


Pssm-ID: 400161 [Multi-domain]  Cd Length: 141  Bit Score: 110.92  E-value: 2.90e-28
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1023946303  120 IIAYWSTDLFGFYTTPTNVTLEMTGYFLPPQTGSYTFKFAtVDDSAILSVGGNVAFECCAQEQPPITSTdftisgikqwn 199
Cdd:pfam07691   28 NTFYWDTDVPGFGEAPGDFSARWTGYLLPPESGTYTFGVA-SDDGARLWIDGELVIDNWGQHPPDASPE----------- 95
                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|..
gi 1023946303  200 esppdnITGTVYMYAGFYYPMKIVYSNAVAWGTLPISVTLPDGTTVSDDFEG 251
Cdd:pfam07691   96 ------ESNTLYLVAGKLYPIRIEYFHAGTGGSVQLSWTSPDGGGEEIDEDG 141
PA14 smart00758
domain in bacterial beta-glucosidases other glycosidases, glycosyltransferases, proteases, ...
122-250 8.04e-21

domain in bacterial beta-glucosidases other glycosidases, glycosyltransferases, proteases, amidases, yeast adhesins, and bacterial toxins;


Pssm-ID: 214807 [Multi-domain]  Cd Length: 136  Bit Score: 89.77  E-value: 8.04e-21
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1023946303   122 AYWSTDLFGFYTTPTNVTLEMTGYFLPPQTGSYTFKFaTVDDSAILSVGGNVAFECCaqeqppitstdftisgikqWNES 201
Cdd:smart00758   28 FYWDSDKFGEGEKADNFSVRWTGYLKPPEDGEYTFSI-TSDDGARLWIDGKLVIDNW-------------------GKHE 87
                            90       100       110       120
                    ....*....|....*....|....*....|....*....|....*....
gi 1023946303   202 PPDNITGTVYMYAGFYYPMKIVYSNAVAWGTLPISVTLPDGTTVSDDFE 250
Cdd:smart00758   88 ARPSTSSTLYLLAGGTYPIRIEYFEAGTGGLLKLGWTTPDAAKEAIDDE 136
GLEYA pfam10528
GLEYA domain; The GLEYA domain is related to lectin-like binding domains found in the S. ...
139-238 8.23e-18

GLEYA domain; The GLEYA domain is related to lectin-like binding domains found in the S. cerevisiae Flo proteins and the C. glabrata Epa proteins. It is a carbohydrate-binding domain that is found in fungal adhesins (also referred to as agglutinins or flocculins). Adhesins with a GLEYA domain possess a typical N-terminal signal peptide and a domain of conserved sequence repeats, but lack glycosylphosphatidylinositol (GPI) anchor attachment signals. They contain a conserved motif G(M/L)(E/A/N/Q)YA, hence the name GLEYA. Based on sequence homology, it is suggested that the GLEYA domain would predominantly contain beta sheets. The GLEYA domain is also found in S. pombe protein Swiss:Q92344, thought to be a kinetochore portein (Sim4 complex subunit), however no direct evidence for kinetochore association has been found. Furthermore, a global protein localization study in S. pombe identified it as a secreted protein localized to the Golgi complex.


Pssm-ID: 463135  Cd Length: 91  Bit Score: 79.51  E-value: 8.23e-18
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1023946303  139 TLEMTGYFLPPQTGSYTFKFATVDDSAILSVGGNvAFECCAQEQPPITSTDFTISGIKQWnesppdnitgTVYMYAGFYY 218
Cdd:pfam10528    2 ALNHRGYFYAPVTGTYTFTLPNADDIAYLWLGDK-AYSGWTRANADLVATYGGGGGSGTY----------TVTLTAGTYY 70
                           90       100
                   ....*....|....*....|
gi 1023946303  219 PMKIVYSNAVAWGTLPISVT 238
Cdd:pfam10528   71 PIRIVYANGGGPGSFNFTIT 90
Flocculin_t3 pfam13928
Flocculin type 3 repeat; This repeat is found in the Flocculation protein FLO9 close to its ...
844-885 2.57e-04

Flocculin type 3 repeat; This repeat is found in the Flocculation protein FLO9 close to its C-terminus.


Pssm-ID: 464047 [Multi-domain]  Cd Length: 44  Bit Score: 39.48  E-value: 2.57e-04
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|..
gi 1023946303  844 LVTVTSCESHVCTESISSAIVSTATVTVSGATTEYTTWCPIS 885
Cdd:pfam13928    3 VITITSCSDDKCHETTVTTGVSTVTTTVNGVVTVYTTYCPLT 44
Flocculin_t3 pfam13928
Flocculin type 3 repeat; This repeat is found in the Flocculation protein FLO9 close to its ...
965-1008 1.19e-03

Flocculin type 3 repeat; This repeat is found in the Flocculation protein FLO9 close to its C-terminus.


Pssm-ID: 464047 [Multi-domain]  Cd Length: 44  Bit Score: 37.55  E-value: 1.19e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|....
gi 1023946303  965 TTLVTVTSCESGVCSETASPAIVSTATATVNDVVTVYPTWRPQT 1008
Cdd:pfam13928    1 TTVITITSCSDDKCHETTVTTGVSTVTTTVNGVVTVYTTYCPLT 44
Flocculin_t3 pfam13928
Flocculin type 3 repeat; This repeat is found in the Flocculation protein FLO9 close to its ...
919-957 6.37e-03

Flocculin type 3 repeat; This repeat is found in the Flocculation protein FLO9 close to its C-terminus.


Pssm-ID: 464047 [Multi-domain]  Cd Length: 44  Bit Score: 35.63  E-value: 6.37e-03
                           10        20        30
                   ....*....|....*....|....*....|....*....
gi 1023946303  919 ISSCESDVCSKTASPAIVSISTATINGVTTEYTTWCPIS 957
Cdd:pfam13928    6 ITSCSDDKCHETTVTTGVSTVTTTVNGVVTVYTTYCPLT 44
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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