hypothetical protein Smp_190110, partial [Schistosoma mansoni]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| NADB_Rossmann super family | cl21454 | Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a ... |
5-58 | 3.06e-03 | ||
Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD(P)H/NAD(P)(+) binding (NADB) domain. The NADB domain is found in numerous dehydrogenases of metabolic pathways such as glycolysis, and many other redox enzymes. NAD binding involves numerous hydrogen-bonds and van der Waals contacts, in particular H-bonding of residues in a turn between the first strand and the subsequent helix of the Rossmann-fold topology. Characteristically, this turn exhibits a consensus binding pattern similar to GXGXXG, in which the first 2 glycines participate in NAD(P)-binding, and the third facilitates close packing of the helix to the beta-strand. Typically, proteins in this family contain a second domain in addition to the NADB domain, which is responsible for specifically binding a substrate and catalyzing a particular enzymatic reaction. The actual alignment was detected with superfamily member COG5044: Pssm-ID: 473865 Cd Length: 434 Bit Score: 33.22 E-value: 3.06e-03
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| Name | Accession | Description | Interval | E-value | ||
| MRS6 | COG5044 | RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational ... |
5-58 | 3.06e-03 | ||
RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones]; Pssm-ID: 227377 Cd Length: 434 Bit Score: 33.22 E-value: 3.06e-03
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| Name | Accession | Description | Interval | E-value | ||
| MRS6 | COG5044 | RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational ... |
5-58 | 3.06e-03 | ||
RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones]; Pssm-ID: 227377 Cd Length: 434 Bit Score: 33.22 E-value: 3.06e-03
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