|
Name |
Accession |
Description |
Interval |
E-value |
| FN3 super family |
cl27307 |
Fibronectin type 3 domain [General function prediction only]; |
1108-1283 |
1.44e-12 |
|
Fibronectin type 3 domain [General function prediction only];
The actual alignment was detected with superfamily member COG3401:
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 73.50 E-value: 1.44e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 1108 SSLTVKASGADFVTLTWTPAT--GAKAYRILGAGAPvDGEEGVIEKTI------TGLMPGTDYLFKVEALDEAGVWTTNG 1179
Cdd:COG3401 237 TGLTATADTPGSVTLSWDPVTesDATGYRVYRSNSG-DGPFTKVATVTttsytdTGLTNGTTYYYRVTAVDAAGNESAPS 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 1180 PSVAFST----PAATdlAELAVTQQGSKAI-LVWGerPGSPGGIHGFRVVRRTANE-PAEVLAtiEDPAVRTYTDEAAES 1253
Cdd:COG3401 316 NVVSVTTdltpPAAP--SGLTATAVGSSSItLSWT--ASSDADVTGYNVYRSTSGGgTYTKIA--ETVTTTSYTDTGLTP 389
|
170 180 190
....*....|....*....|....*....|
gi 1087497069 1254 GKAYIYAVLALDAGGLATPYSVERSITLSA 1283
Cdd:COG3401 390 GTTYYYKVTAVDAAGNESAPSEEVSATTAS 419
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
731-937 |
1.59e-11 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
:
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 65.08 E-value: 1.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 731 SDTNGKRDLFLYDRFSGKVQLISRtasgaaGDGESRDASMSGDGRYIVFTSdasnltadvDSNGQYDVFLYDRDmNGNgi 810
Cdd:COG0823 5 LSRDGNSDIYVVDLDGGEPRRLTN------SPGIDTSPAWSPDGRRIAFTS---------DRGGGPQIYVVDAD-GGE-- 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 811 fdeegdvsLTRISTSwdgkqaDSYSYGPDISGDGTKVVFFTRarnlvqeppESTTYNV-SYDMETGALAPILLPDGKPls 889
Cdd:COG0823 67 --------PRRLTFG------GGYNASPSWSPDGKRLAFVSR---------SDGRFDIyVLDLDGGAPRRLTDGPGSP-- 121
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1087497069 890 aqnlVLNRDGSVAVFTTpedllpeDSNGDDDIYLYDAGGMTLELVTAR 937
Cdd:COG0823 122 ----SWSPDGRRIVFSS-------DRGGRPDLYVVDLDGRKRRLTPAS 158
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
309-500 |
3.36e-11 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
:
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 63.92 E-value: 3.36e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 309 YGLNYGKYRDIFLYDTVLDELKRISRSPAegsaneNSQYPVISANGQFVAYQSladnlgpaDTNGKLDIYVYDRVSGTTE 388
Cdd:COG0823 3 FTLSRDGNSDIYVVDLDGGEPRRLTNSPG------IDTSPAWSPDGRRIAFTS--------DRGGGPQIYVVDADGGEPR 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 389 LgsvrsdGSQAQSDAFHASLSGDGRYLsfhtsgAFGEDDTGDVpDVYVRDRWTGTTKRVSNAHLGgnangesvrATFAAD 468
Cdd:COG0823 69 R------LTFGGGYNASPSWSPDGKRL------AFVSRSDGRF-DIYVLDLDGGAPRRLTDGPGS---------PSWSPD 126
|
170 180 190
....*....|....*....|....*....|..
gi 1087497069 469 GLSIAFESNAtdllatadvDAFSDIYVVPLEG 500
Cdd:COG0823 127 GRRIVFSSDR---------GGRPDLYVVDLDG 149
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
914-1078 |
1.31e-10 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
:
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 62.38 E-value: 1.31e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 914 DSNGDDDIYLYDAGGMTLELVTArgalGRAWPQRPAVDDSGRYVAFTVSRNTPPysQVYVYDREkTGDAkyELISvvpqd 993
Cdd:COG0823 6 SRDGNSDIYVVDLDGGEPRRLTN----SPGIDTSPAWSPDGRRIAFTSDRGGGP--QIYVVDAD-GGEP--RRLT----- 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 994 rEASMHSSDPDISRDGRYVSFHSNEPGLMEgdgqgqsIFIRDR-TEQVTKLASRTYNPAvvpndyaskarISGDGSWIAY 1072
Cdd:COG0823 72 -FGGGYNASPSWSPDGKRLAFVSRSDGRFD-------IYVLDLdGGAPRRLTDGPGSPS-----------WSPDGRRIVF 132
|
....*.
gi 1087497069 1073 NSNADN 1078
Cdd:COG0823 133 SSDRGG 138
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
198-393 |
1.70e-10 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
:
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 62.00 E-value: 1.70e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 198 GDTNSQEDLFLYDASTGKVQRIAervpgSEYAGHGSPyQVSTDGRFAAYVGNNGPesaNNNILLKDLRTGAVKLVAARTF 277
Cdd:COG0823 5 LSRDGNSDIYVVDLDGGEPRRLT-----NSPGIDTSP-AWSPDGRRIAFTSDRGG---GPQIYVVDADGGEPRRLTFGGG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 278 LYdqtrARVSMSADARFLVFESFQreltlddyglnYGKYrDIFLYDTVLDELKRISRSPAEgsanensqyPVISANGQFV 357
Cdd:COG0823 76 YN----ASPSWSPDGKRLAFVSRS-----------DGRF-DIYVLDLDGGAPRRLTDGPGS---------PSWSPDGRRI 130
|
170 180 190
....*....|....*....|....*....|....*.
gi 1087497069 358 AYQSladnlgpaDTNGKLDIYVYDRVSGTTELGSVR 393
Cdd:COG0823 131 VFSS--------DRGGRPDLYVVDLDGRKRRLTPAS 158
|
|
| SLH |
pfam00395 |
S-layer homology domain; |
3026-3066 |
1.76e-10 |
|
S-layer homology domain;
:
Pssm-ID: 459798 [Multi-domain] Cd Length: 42 Bit Score: 58.37 E-value: 1.76e-10
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 1087497069 3026 FSDLDDHWGRAD-IEALAARGIVTGDPGGTFRPNGSVTRAEF 3066
Cdd:pfam00395 1 FKDVKSVAAWAEaVAALAELGIISGYPDGTFRPNEPITRAEA 42
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
112-275 |
4.16e-10 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
:
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 60.84 E-value: 4.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 112 ATGDSRASSISGDGRYVAFVSTSativegktNGFQDVFVRDRTTGMTQLISlgsdgdQANGDSYAPMISMDGTYVLFSSk 191
Cdd:COG0823 29 SPGIDTSPAWSPDGRRIAFTSDR--------GGGPQIYVVDADGGEPRRLT------FGGGYNASPSWSPDGKRLAFVS- 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 192 atnlvpgDTNSQEDLFLYDASTGKVQRIAErvpgseyaGHGSPyQVSTDGRFAAYVGNngpESANNNILLKDLRTGAVKL 271
Cdd:COG0823 94 -------RSDGRFDIYVLDLDGGAPRRLTD--------GPGSP-SWSPDGRRIVFSSD---RGGRPDLYVVDLDGRKRRL 154
|
....
gi 1087497069 272 VAAR 275
Cdd:COG0823 155 TPAS 158
|
|
| FN3 super family |
cl27307 |
Fibronectin type 3 domain [General function prediction only]; |
2627-2846 |
2.18e-07 |
|
Fibronectin type 3 domain [General function prediction only];
The actual alignment was detected with superfamily member COG3401:
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 56.55 E-value: 2.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 2627 YRVTAEAAlqsyAGVPTGerYEAEVTVTAaDTTPPLPVEGLQVEVDAKRAL-LNWRLPRDPELVKVELrYKEQAASGEAG 2705
Cdd:COG3401 300 YRVTAVDA----AGNESA--PSNVVSVTT-DLTPPAAPSGLTATAVGSSSItLSWTASSDADVTGYNV-YRSTSGGGTYT 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 2706 EVEIPADQPFALVEGLSESTNYVFQILAYDAAGNYS--TAEVKASTGSPGSIGPDVTPPAAIREPSAKAAATEIeLTWSD 2783
Cdd:COG3401 372 KIAETVTTTSYTDTGLTPGTTYYYKVTAVDAAGNESapSEEVSATTASAASGESLTASVDAVPLTDVAGATAAA-SAASN 450
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1087497069 2784 PADPDLAIVNLQWTKTGQPFEGEPVDVRKGVGRFAITGLTPATEYEIRHWTVDESGNASTAES 2846
Cdd:COG3401 451 PGVSAAVLADGGDTGNAVPFTTTSSTVTATTTDTTTANLSVTTGSLVGGSGASSVTNSVSVIG 513
|
|
| CarboxypepD_reg |
pfam13620 |
Carboxypeptidase regulatory-like domain; |
1569-1643 |
6.35e-06 |
|
Carboxypeptidase regulatory-like domain;
:
Pssm-ID: 433354 [Multi-domain] Cd Length: 81 Bit Score: 46.50 E-value: 6.35e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1087497069 1569 LEGKVYQPNGTPLEGAVVTVV--QGGAKYTASTDAEGTYSLNVPSLGS-SVQAVADGVFPSVPQWIRAVPGRQ-TVDIQ 1643
Cdd:pfam13620 2 ISGTVTDPSGAPVPGATVTVTntDTGTVRTTTTDADGRYRFPGLPPGTyTVTVSAPGFKTATRTGVTVTAGQTtTLDVT 80
|
|
| COG4733 super family |
cl34810 |
Phage-related protein, tail protein J [Mobilome: prophages, transposons]; |
505-871 |
2.38e-05 |
|
Phage-related protein, tail protein J [Mobilome: prophages, transposons];
The actual alignment was detected with superfamily member COG4733:
Pssm-ID: 443767 [Multi-domain] Cd Length: 978 Bit Score: 50.33 E-value: 2.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 505 APEWPVETVPSA------APGGAYVAL--SWPEVPGAAYYKILQ---DGKL--AGITKEPRYAASGLLPGTaYTYRVAAG 571
Cdd:COG4733 528 PPQWPPVNVTTSeslsvvAQGTAVTTLtvSWDAPAGAVAYEVEWrrdDGNWvsVPRTSGTSFEVPGIYAGD-YEVRVRAI 606
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 572 SADFRWSGWSgEAAVRTLTAPETTPPGSGIVTATVQPGLIEAEWQLPNDPDVVGARlIWRMPGqSERQSAMYPKHVNRAK 651
Cdd:COG4733 607 NALGVSSAWA-ASSETTVTGKTAPPPAPTGLTATGGLGGITLSWSFPVDADTLRTE-IRYSTT-GDWASATVAQALYPGN 683
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 652 ---IPNVMNGEDYEVQIAVYDGDGNRslSGWQpisippgpaivrIDTRAEDGRAAPGEAvIEDMSEDGRYTVFISSAPDL 728
Cdd:COG4733 684 tytLAGLKAGQTYYYRARAVDRSGNV--SAWW------------VSGQASADAAGILDA-ITGQILETELGQELDAIIQN 748
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 729 ALSDTNGKRDLFLYDRFSGKVQLISRTASGAAGDGESRDASMSGDGRYIVFTSDASNLTADVDSNGQYDVFLYDRDMN-G 807
Cdd:COG4733 749 ATVAEVVAATVTDVTAQIDTAVLFAGVATAAAIGAEARVAATVAESATAAAATGTAADAAGDASGGVTAGTSGTTGAGdT 828
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1087497069 808 NGIFDEEGDVSLTRISTSWDGKQADSYSYGpdiSGDGTKVVFFTRARNLVQEPPESTTYNVSYD 871
Cdd:COG4733 829 AASTTRVAAAVVLAGVVVYGDAIIESGNTG---DIVATGDIASAAAGAVATTVSGTTAADVSAV 889
|
|
| SLH |
pfam00395 |
S-layer homology domain; |
3085-3125 |
5.21e-04 |
|
S-layer homology domain;
:
Pssm-ID: 459798 [Multi-domain] Cd Length: 42 Bit Score: 39.88 E-value: 5.21e-04
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 1087497069 3085 FDDVPADAWYAEAIAEASAAGVVVGDG-GKFRPNDPVSREEM 3125
Cdd:pfam00395 1 FKDVKSVAAWAEAVAALAELGIISGYPdGTFRPNEPITRAEA 42
|
|
| Big_5 |
pfam13205 |
Bacterial Ig-like domain; |
2544-2640 |
8.22e-04 |
|
Bacterial Ig-like domain;
:
Pssm-ID: 463809 [Multi-domain] Cd Length: 105 Bit Score: 41.21 E-value: 8.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 2544 ISTLPArPIKTSVAPGgASIELLFDRHVRSEAADDGLLVVVSEESGEEVAGEWQAlepiaingaqASARLRFTPDDPLTV 2623
Cdd:pfam13205 8 VSTTPA-DGATNVAVN-SSITVTFSEAIDPATVNAAVVIVLSDGAGVPVTGTVSV----------DGKTVTITPSAALAA 75
|
90
....*....|....*..
gi 1087497069 2624 GAVYRVTAEAALQSYAG 2640
Cdd:pfam13205 76 NTTYTVTITAGIKDLAG 92
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1108-1283 |
1.44e-12 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 73.50 E-value: 1.44e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 1108 SSLTVKASGADFVTLTWTPAT--GAKAYRILGAGAPvDGEEGVIEKTI------TGLMPGTDYLFKVEALDEAGVWTTNG 1179
Cdd:COG3401 237 TGLTATADTPGSVTLSWDPVTesDATGYRVYRSNSG-DGPFTKVATVTttsytdTGLTNGTTYYYRVTAVDAAGNESAPS 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 1180 PSVAFST----PAATdlAELAVTQQGSKAI-LVWGerPGSPGGIHGFRVVRRTANE-PAEVLAtiEDPAVRTYTDEAAES 1253
Cdd:COG3401 316 NVVSVTTdltpPAAP--SGLTATAVGSSSItLSWT--ASSDADVTGYNVYRSTSGGgTYTKIA--ETVTTTSYTDTGLTP 389
|
170 180 190
....*....|....*....|....*....|
gi 1087497069 1254 GKAYIYAVLALDAGGLATPYSVERSITLSA 1283
Cdd:COG3401 390 GTTYYYKVTAVDAAGNESAPSEEVSATTAS 419
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
731-937 |
1.59e-11 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 65.08 E-value: 1.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 731 SDTNGKRDLFLYDRFSGKVQLISRtasgaaGDGESRDASMSGDGRYIVFTSdasnltadvDSNGQYDVFLYDRDmNGNgi 810
Cdd:COG0823 5 LSRDGNSDIYVVDLDGGEPRRLTN------SPGIDTSPAWSPDGRRIAFTS---------DRGGGPQIYVVDAD-GGE-- 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 811 fdeegdvsLTRISTSwdgkqaDSYSYGPDISGDGTKVVFFTRarnlvqeppESTTYNV-SYDMETGALAPILLPDGKPls 889
Cdd:COG0823 67 --------PRRLTFG------GGYNASPSWSPDGKRLAFVSR---------SDGRFDIyVLDLDGGAPRRLTDGPGSP-- 121
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1087497069 890 aqnlVLNRDGSVAVFTTpedllpeDSNGDDDIYLYDAGGMTLELVTAR 937
Cdd:COG0823 122 ----SWSPDGRRIVFSS-------DRGGRPDLYVVDLDGRKRRLTPAS 158
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
309-500 |
3.36e-11 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 63.92 E-value: 3.36e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 309 YGLNYGKYRDIFLYDTVLDELKRISRSPAegsaneNSQYPVISANGQFVAYQSladnlgpaDTNGKLDIYVYDRVSGTTE 388
Cdd:COG0823 3 FTLSRDGNSDIYVVDLDGGEPRRLTNSPG------IDTSPAWSPDGRRIAFTS--------DRGGGPQIYVVDADGGEPR 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 389 LgsvrsdGSQAQSDAFHASLSGDGRYLsfhtsgAFGEDDTGDVpDVYVRDRWTGTTKRVSNAHLGgnangesvrATFAAD 468
Cdd:COG0823 69 R------LTFGGGYNASPSWSPDGKRL------AFVSRSDGRF-DIYVLDLDGGAPRRLTDGPGS---------PSWSPD 126
|
170 180 190
....*....|....*....|....*....|..
gi 1087497069 469 GLSIAFESNAtdllatadvDAFSDIYVVPLEG 500
Cdd:COG0823 127 GRRIVFSSDR---------GGRPDLYVVDLDG 149
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
914-1078 |
1.31e-10 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 62.38 E-value: 1.31e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 914 DSNGDDDIYLYDAGGMTLELVTArgalGRAWPQRPAVDDSGRYVAFTVSRNTPPysQVYVYDREkTGDAkyELISvvpqd 993
Cdd:COG0823 6 SRDGNSDIYVVDLDGGEPRRLTN----SPGIDTSPAWSPDGRRIAFTSDRGGGP--QIYVVDAD-GGEP--RRLT----- 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 994 rEASMHSSDPDISRDGRYVSFHSNEPGLMEgdgqgqsIFIRDR-TEQVTKLASRTYNPAvvpndyaskarISGDGSWIAY 1072
Cdd:COG0823 72 -FGGGYNASPSWSPDGKRLAFVSRSDGRFD-------IYVLDLdGGAPRRLTDGPGSPS-----------WSPDGRRIVF 132
|
....*.
gi 1087497069 1073 NSNADN 1078
Cdd:COG0823 133 SSDRGG 138
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
198-393 |
1.70e-10 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 62.00 E-value: 1.70e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 198 GDTNSQEDLFLYDASTGKVQRIAervpgSEYAGHGSPyQVSTDGRFAAYVGNNGPesaNNNILLKDLRTGAVKLVAARTF 277
Cdd:COG0823 5 LSRDGNSDIYVVDLDGGEPRRLT-----NSPGIDTSP-AWSPDGRRIAFTSDRGG---GPQIYVVDADGGEPRRLTFGGG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 278 LYdqtrARVSMSADARFLVFESFQreltlddyglnYGKYrDIFLYDTVLDELKRISRSPAEgsanensqyPVISANGQFV 357
Cdd:COG0823 76 YN----ASPSWSPDGKRLAFVSRS-----------DGRF-DIYVLDLDGGAPRRLTDGPGS---------PSWSPDGRRI 130
|
170 180 190
....*....|....*....|....*....|....*.
gi 1087497069 358 AYQSladnlgpaDTNGKLDIYVYDRVSGTTELGSVR 393
Cdd:COG0823 131 VFSS--------DRGGRPDLYVVDLDGRKRRLTPAS 158
|
|
| SLH |
pfam00395 |
S-layer homology domain; |
3026-3066 |
1.76e-10 |
|
S-layer homology domain;
Pssm-ID: 459798 [Multi-domain] Cd Length: 42 Bit Score: 58.37 E-value: 1.76e-10
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 1087497069 3026 FSDLDDHWGRAD-IEALAARGIVTGDPGGTFRPNGSVTRAEF 3066
Cdd:pfam00395 1 FKDVKSVAAWAEaVAALAELGIISGYPDGTFRPNEPITRAEA 42
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
112-275 |
4.16e-10 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 60.84 E-value: 4.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 112 ATGDSRASSISGDGRYVAFVSTSativegktNGFQDVFVRDRTTGMTQLISlgsdgdQANGDSYAPMISMDGTYVLFSSk 191
Cdd:COG0823 29 SPGIDTSPAWSPDGRRIAFTSDR--------GGGPQIYVVDADGGEPRRLT------FGGGYNASPSWSPDGKRLAFVS- 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 192 atnlvpgDTNSQEDLFLYDASTGKVQRIAErvpgseyaGHGSPyQVSTDGRFAAYVGNngpESANNNILLKDLRTGAVKL 271
Cdd:COG0823 94 -------RSDGRFDIYVLDLDGGAPRRLTD--------GPGSP-SWSPDGRRIVFSSD---RGGRPDLYVVDLDGRKRRL 154
|
....
gi 1087497069 272 VAAR 275
Cdd:COG0823 155 TPAS 158
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
2627-2846 |
2.18e-07 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 56.55 E-value: 2.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 2627 YRVTAEAAlqsyAGVPTGerYEAEVTVTAaDTTPPLPVEGLQVEVDAKRAL-LNWRLPRDPELVKVELrYKEQAASGEAG 2705
Cdd:COG3401 300 YRVTAVDA----AGNESA--PSNVVSVTT-DLTPPAAPSGLTATAVGSSSItLSWTASSDADVTGYNV-YRSTSGGGTYT 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 2706 EVEIPADQPFALVEGLSESTNYVFQILAYDAAGNYS--TAEVKASTGSPGSIGPDVTPPAAIREPSAKAAATEIeLTWSD 2783
Cdd:COG3401 372 KIAETVTTTSYTDTGLTPGTTYYYKVTAVDAAGNESapSEEVSATTASAASGESLTASVDAVPLTDVAGATAAA-SAASN 450
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1087497069 2784 PADPDLAIVNLQWTKTGQPFEGEPVDVRKGVGRFAITGLTPATEYEIRHWTVDESGNASTAES 2846
Cdd:COG3401 451 PGVSAAVLADGGDTGNAVPFTTTSSTVTATTTDTTTANLSVTTGSLVGGSGASSVTNSVSVIG 513
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
2661-2738 |
1.67e-06 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 48.38 E-value: 1.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 2661 PLPVEGLQV-EVDAKRALLNWRLPRDPELVKVELRYKEQAASGEAGEVEIPAD--QPFALVEGLSESTNYVFQILAYDAA 2737
Cdd:smart00060 1 PSPPSNLRVtDVTSTSVTLSWEPPPDDGITGYIVGYRVEYREEGSEWKEVNVTpsSTSYTLTGLKPGTEYEFRVRAVNGA 80
|
.
gi 1087497069 2738 G 2738
Cdd:smart00060 81 G 81
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
2663-2739 |
3.37e-06 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 47.41 E-value: 3.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 2663 PVEGLQV-EVDAKRALLNWRLPRDP--ELVKVELRYKEQAASGEAGEVEIPADQPFALVEGLSESTNYVFQILAYDAAGN 2739
Cdd:pfam00041 2 APSNLTVtDVTSTSLTVSWTPPPDGngPITGYEVEYRPKNSGEPWNEITVPGTTTSVTLTGLKPGTEYEVRVQAVNGGGE 81
|
|
| CarboxypepD_reg |
pfam13620 |
Carboxypeptidase regulatory-like domain; |
1569-1643 |
6.35e-06 |
|
Carboxypeptidase regulatory-like domain;
Pssm-ID: 433354 [Multi-domain] Cd Length: 81 Bit Score: 46.50 E-value: 6.35e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1087497069 1569 LEGKVYQPNGTPLEGAVVTVV--QGGAKYTASTDAEGTYSLNVPSLGS-SVQAVADGVFPSVPQWIRAVPGRQ-TVDIQ 1643
Cdd:pfam13620 2 ISGTVTDPSGAPVPGATVTVTntDTGTVRTTTTDADGRYRFPGLPPGTyTVTVSAPGFKTATRTGVTVTAGQTtTLDVT 80
|
|
| COG4733 |
COG4733 |
Phage-related protein, tail protein J [Mobilome: prophages, transposons]; |
505-871 |
2.38e-05 |
|
Phage-related protein, tail protein J [Mobilome: prophages, transposons];
Pssm-ID: 443767 [Multi-domain] Cd Length: 978 Bit Score: 50.33 E-value: 2.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 505 APEWPVETVPSA------APGGAYVAL--SWPEVPGAAYYKILQ---DGKL--AGITKEPRYAASGLLPGTaYTYRVAAG 571
Cdd:COG4733 528 PPQWPPVNVTTSeslsvvAQGTAVTTLtvSWDAPAGAVAYEVEWrrdDGNWvsVPRTSGTSFEVPGIYAGD-YEVRVRAI 606
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 572 SADFRWSGWSgEAAVRTLTAPETTPPGSGIVTATVQPGLIEAEWQLPNDPDVVGARlIWRMPGqSERQSAMYPKHVNRAK 651
Cdd:COG4733 607 NALGVSSAWA-ASSETTVTGKTAPPPAPTGLTATGGLGGITLSWSFPVDADTLRTE-IRYSTT-GDWASATVAQALYPGN 683
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 652 ---IPNVMNGEDYEVQIAVYDGDGNRslSGWQpisippgpaivrIDTRAEDGRAAPGEAvIEDMSEDGRYTVFISSAPDL 728
Cdd:COG4733 684 tytLAGLKAGQTYYYRARAVDRSGNV--SAWW------------VSGQASADAAGILDA-ITGQILETELGQELDAIIQN 748
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 729 ALSDTNGKRDLFLYDRFSGKVQLISRTASGAAGDGESRDASMSGDGRYIVFTSDASNLTADVDSNGQYDVFLYDRDMN-G 807
Cdd:COG4733 749 ATVAEVVAATVTDVTAQIDTAVLFAGVATAAAIGAEARVAATVAESATAAAATGTAADAAGDASGGVTAGTSGTTGAGdT 828
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1087497069 808 NGIFDEEGDVSLTRISTSWDGKQADSYSYGpdiSGDGTKVVFFTRARNLVQEPPESTTYNVSYD 871
Cdd:COG4733 829 AASTTRVAAAVVLAGVVVYGDAIIESGNTG---DIVATGDIASAAAGAVATTVSGTTAADVSAV 889
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1108-1173 |
3.12e-05 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 44.91 E-value: 3.12e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1087497069 1108 SSLTVKASGADFVTLTWTPATGAKA------YRILGAGA-----PVDGEEGVIEKTITGLMPGTDYLFKVEALDEAG 1173
Cdd:smart00060 5 SNLRVTDVTSTSVTLSWEPPPDDGItgyivgYRVEYREEgsewkEVNVTPSSTSYTLTGLKPGTEYEFRVRAVNGAG 81
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
2661-2738 |
8.66e-05 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 43.64 E-value: 8.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 2661 PLPVEGLQV-EVDAKRALLNWRLPRDP--ELVKVELRYKEQAASGEAGEVEIPADQPFALVEGLSESTNYVFQILAYDAA 2737
Cdd:cd00063 1 PSPPTNLRVtDVTSTSVTLSWTPPEDDggPITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNGG 80
|
.
gi 1087497069 2738 G 2738
Cdd:cd00063 81 G 81
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1105-1186 |
1.62e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 42.87 E-value: 1.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 1105 PAGSSLTVKASGADFVTLTWTPATGAKA--------YRILGAGAPVDGEEGVIEKT---ITGLMPGTDYLFKVEALDEAG 1173
Cdd:cd00063 2 SPPTNLRVTDVTSTSVTLSWTPPEDDGGpitgyvveYREKGSGDWKEVEVTPGSETsytLTGLKPGTEYEFRVRAVNGGG 81
|
90
....*....|...
gi 1087497069 1174 vWTTNGPSVAFST 1186
Cdd:cd00063 82 -ESPPSESVTVTT 93
|
|
| SLH |
pfam00395 |
S-layer homology domain; |
3085-3125 |
5.21e-04 |
|
S-layer homology domain;
Pssm-ID: 459798 [Multi-domain] Cd Length: 42 Bit Score: 39.88 E-value: 5.21e-04
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 1087497069 3085 FDDVPADAWYAEAIAEASAAGVVVGDG-GKFRPNDPVSREEM 3125
Cdd:pfam00395 1 FKDVKSVAAWAEAVAALAELGIISGYPdGTFRPNEPITRAEA 42
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
1110-1174 |
7.91e-04 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 40.86 E-value: 7.91e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1087497069 1110 LTVKASGADFVTLTWTPATGAKA----YRIlgAGAPVDGEEGVIEK---------TITGLMPGTDYLFKVEALDEAGV 1174
Cdd:pfam00041 6 LTVTDVTSTSLTVSWTPPPDGNGpitgYEV--EYRPKNSGEPWNEItvpgtttsvTLTGLKPGTEYEVRVQAVNGGGE 81
|
|
| Big_5 |
pfam13205 |
Bacterial Ig-like domain; |
2544-2640 |
8.22e-04 |
|
Bacterial Ig-like domain;
Pssm-ID: 463809 [Multi-domain] Cd Length: 105 Bit Score: 41.21 E-value: 8.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 2544 ISTLPArPIKTSVAPGgASIELLFDRHVRSEAADDGLLVVVSEESGEEVAGEWQAlepiaingaqASARLRFTPDDPLTV 2623
Cdd:pfam13205 8 VSTTPA-DGATNVAVN-SSITVTFSEAIDPATVNAAVVIVLSDGAGVPVTGTVSV----------DGKTVTITPSAALAA 75
|
90
....*....|....*..
gi 1087497069 2624 GAVYRVTAEAALQSYAG 2640
Cdd:pfam13205 76 NTTYTVTITAGIKDLAG 92
|
|
| Ca_tandemer |
NF033510 |
Ca2+-stabilized adhesin repeat; This repeat is found in proteins such as the ... |
1583-1622 |
9.76e-03 |
|
Ca2+-stabilized adhesin repeat; This repeat is found in proteins such as the biofilm-associated protein Bap of Acinetobacter baumannii (which can exceed 8000 amino acids in length), the calcium-stabilized ice-binding adhesin of the Antarctic bacterium Marinomonas primoryensis, and the giant calcium-binding adhesin SiiE of Salmonella enterica.
Pssm-ID: 411149 [Multi-domain] Cd Length: 97 Bit Score: 38.04 E-value: 9.76e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 1087497069 1583 GAVVTVVQGGAKYTASTDAEGTYSLNVPSlgSSVQAVADG 1622
Cdd:NF033510 44 GQTVTVTLNGKTYTATVDADGSWSVTVPA--ADLAALADG 81
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1108-1283 |
1.44e-12 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 73.50 E-value: 1.44e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 1108 SSLTVKASGADFVTLTWTPAT--GAKAYRILGAGAPvDGEEGVIEKTI------TGLMPGTDYLFKVEALDEAGVWTTNG 1179
Cdd:COG3401 237 TGLTATADTPGSVTLSWDPVTesDATGYRVYRSNSG-DGPFTKVATVTttsytdTGLTNGTTYYYRVTAVDAAGNESAPS 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 1180 PSVAFST----PAATdlAELAVTQQGSKAI-LVWGerPGSPGGIHGFRVVRRTANE-PAEVLAtiEDPAVRTYTDEAAES 1253
Cdd:COG3401 316 NVVSVTTdltpPAAP--SGLTATAVGSSSItLSWT--ASSDADVTGYNVYRSTSGGgTYTKIA--ETVTTTSYTDTGLTP 389
|
170 180 190
....*....|....*....|....*....|
gi 1087497069 1254 GKAYIYAVLALDAGGLATPYSVERSITLSA 1283
Cdd:COG3401 390 GTTYYYKVTAVDAAGNESAPSEEVSATTAS 419
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
731-937 |
1.59e-11 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 65.08 E-value: 1.59e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 731 SDTNGKRDLFLYDRFSGKVQLISRtasgaaGDGESRDASMSGDGRYIVFTSdasnltadvDSNGQYDVFLYDRDmNGNgi 810
Cdd:COG0823 5 LSRDGNSDIYVVDLDGGEPRRLTN------SPGIDTSPAWSPDGRRIAFTS---------DRGGGPQIYVVDAD-GGE-- 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 811 fdeegdvsLTRISTSwdgkqaDSYSYGPDISGDGTKVVFFTRarnlvqeppESTTYNV-SYDMETGALAPILLPDGKPls 889
Cdd:COG0823 67 --------PRRLTFG------GGYNASPSWSPDGKRLAFVSR---------SDGRFDIyVLDLDGGAPRRLTDGPGSP-- 121
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1087497069 890 aqnlVLNRDGSVAVFTTpedllpeDSNGDDDIYLYDAGGMTLELVTAR 937
Cdd:COG0823 122 ----SWSPDGRRIVFSS-------DRGGRPDLYVVDLDGRKRRLTPAS 158
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
309-500 |
3.36e-11 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 63.92 E-value: 3.36e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 309 YGLNYGKYRDIFLYDTVLDELKRISRSPAegsaneNSQYPVISANGQFVAYQSladnlgpaDTNGKLDIYVYDRVSGTTE 388
Cdd:COG0823 3 FTLSRDGNSDIYVVDLDGGEPRRLTNSPG------IDTSPAWSPDGRRIAFTS--------DRGGGPQIYVVDADGGEPR 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 389 LgsvrsdGSQAQSDAFHASLSGDGRYLsfhtsgAFGEDDTGDVpDVYVRDRWTGTTKRVSNAHLGgnangesvrATFAAD 468
Cdd:COG0823 69 R------LTFGGGYNASPSWSPDGKRL------AFVSRSDGRF-DIYVLDLDGGAPRRLTDGPGS---------PSWSPD 126
|
170 180 190
....*....|....*....|....*....|..
gi 1087497069 469 GLSIAFESNAtdllatadvDAFSDIYVVPLEG 500
Cdd:COG0823 127 GRRIVFSSDR---------GGRPDLYVVDLDG 149
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
308-845 |
5.87e-11 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 68.49 E-value: 5.87e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 308 DYGLNYGKYRDIFLYDTVLDELKRISRSPAEGSANENSQYPVISANGQFVAYQSLADNLGPADTNGKLDIYVYDRVSGTT 387
Cdd:COG3401 20 NTAVNALSKAGGSGKTILVYLAVVLSVTTKESPGTLLVAAGLSSGGGLGTGGRAGTTSGVAAVAVAAAPPTATGLTTLTG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 388 ELGSVRSDGSQAQSDAFHASLSGDGRYLSFHTSGAFGEDDTGDVPDVYVRDRWTGTTKRVSNAHLGGNANGESVRATFAA 467
Cdd:COG3401 100 SGSVGGATNTGLTSSDEVPSPAVGTATTATAVAGGAATAGTYALGAGLYGVDGANASGTTASSVAGAGVVVSPDTSATAA 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 468 DGLSIAFESNATDLLATADVDAFSDIY--VVPLEGAGGSAPEWPVE-----TVPSA-------APGGAYVALSWPEVP-- 531
Cdd:COG3401 180 VATTSLTVTSTTLVDGGGDIEPGTTYYyrVAATDTGGESAPSNEVSvttptTPPSAptgltatADTPGSVTLSWDPVTes 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 532 GAAYYKILQDGKLAGI------TKEPRYAASGLLPGTAYTYRVAAGSADFRWSGWSGEAAVRTLTAPETTPpgSGIVTAT 605
Cdd:COG3401 260 DATGYRVYRSNSGDGPftkvatVTTTSYTDTGLTNGTTYYYRVTAVDAAGNESAPSNVVSVTTDLTPPAAP--SGLTATA 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 606 VQPGLIEAEWQLPNDPDVVGARlIWRMPGQSERQSAMYPKH-VNRAKIPNVMNGEDYEVQIAVYDGDGNRSLSGwQPISI 684
Cdd:COG3401 338 VGSSSITLSWTASSDADVTGYN-VYRSTSGGGTYTKIAETVtTTSYTDTGLTPGTTYYYKVTAVDAAGNESAPS-EEVSA 415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 685 PPGPAIVR-IDTRAEDGRAAPGEAVIEDMSEDGRYTvfISSAPDLALSDTNGKRDLFLYDRFSGKVQLISRTASGAAGDG 763
Cdd:COG3401 416 TTASAASGeSLTASVDAVPLTDVAGATAAASAASNP--GVSAAVLADGGDTGNAVPFTTTSSTVTATTTDTTTANLSVTT 493
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 764 ESrdasmsgDGRYIVFTSDASNLTADVDSNGQYDVFLYDRDMNGNGIFDEEGDVSLTRISTSWDGKQADSYSYGPDISGD 843
Cdd:COG3401 494 GS-------LVGGSGASSVTNSVSVIGASAAAAVGGAPDGTPNVTGASPVTVGASTGDVLITDLVSLTTSASSSVSGAGL 566
|
..
gi 1087497069 844 GT 845
Cdd:COG3401 567 GS 568
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
914-1078 |
1.31e-10 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 62.38 E-value: 1.31e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 914 DSNGDDDIYLYDAGGMTLELVTArgalGRAWPQRPAVDDSGRYVAFTVSRNTPPysQVYVYDREkTGDAkyELISvvpqd 993
Cdd:COG0823 6 SRDGNSDIYVVDLDGGEPRRLTN----SPGIDTSPAWSPDGRRIAFTSDRGGGP--QIYVVDAD-GGEP--RRLT----- 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 994 rEASMHSSDPDISRDGRYVSFHSNEPGLMEgdgqgqsIFIRDR-TEQVTKLASRTYNPAvvpndyaskarISGDGSWIAY 1072
Cdd:COG0823 72 -FGGGYNASPSWSPDGKRLAFVSRSDGRFD-------IYVLDLdGGAPRRLTDGPGSPS-----------WSPDGRRIVF 132
|
....*.
gi 1087497069 1073 NSNADN 1078
Cdd:COG0823 133 SSDRGG 138
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
198-393 |
1.70e-10 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 62.00 E-value: 1.70e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 198 GDTNSQEDLFLYDASTGKVQRIAervpgSEYAGHGSPyQVSTDGRFAAYVGNNGPesaNNNILLKDLRTGAVKLVAARTF 277
Cdd:COG0823 5 LSRDGNSDIYVVDLDGGEPRRLT-----NSPGIDTSP-AWSPDGRRIAFTSDRGG---GPQIYVVDADGGEPRRLTFGGG 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 278 LYdqtrARVSMSADARFLVFESFQreltlddyglnYGKYrDIFLYDTVLDELKRISRSPAEgsanensqyPVISANGQFV 357
Cdd:COG0823 76 YN----ASPSWSPDGKRLAFVSRS-----------DGRF-DIYVLDLDGGAPRRLTDGPGS---------PSWSPDGRRI 130
|
170 180 190
....*....|....*....|....*....|....*.
gi 1087497069 358 AYQSladnlgpaDTNGKLDIYVYDRVSGTTELGSVR 393
Cdd:COG0823 131 VFSS--------DRGGRPDLYVVDLDGRKRRLTPAS 158
|
|
| SLH |
pfam00395 |
S-layer homology domain; |
3026-3066 |
1.76e-10 |
|
S-layer homology domain;
Pssm-ID: 459798 [Multi-domain] Cd Length: 42 Bit Score: 58.37 E-value: 1.76e-10
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 1087497069 3026 FSDLDDHWGRAD-IEALAARGIVTGDPGGTFRPNGSVTRAEF 3066
Cdd:pfam00395 1 FKDVKSVAAWAEaVAALAELGIISGYPDGTFRPNEPITRAEA 42
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
112-275 |
4.16e-10 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 60.84 E-value: 4.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 112 ATGDSRASSISGDGRYVAFVSTSativegktNGFQDVFVRDRTTGMTQLISlgsdgdQANGDSYAPMISMDGTYVLFSSk 191
Cdd:COG0823 29 SPGIDTSPAWSPDGRRIAFTSDR--------GGGPQIYVVDADGGEPRRLT------FGGGYNASPSWSPDGKRLAFVS- 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 192 atnlvpgDTNSQEDLFLYDASTGKVQRIAErvpgseyaGHGSPyQVSTDGRFAAYVGNngpESANNNILLKDLRTGAVKL 271
Cdd:COG0823 94 -------RSDGRFDIYVLDLDGGAPRRLTD--------GPGSP-SWSPDGRRIVFSSD---RGGRPDLYVVDLDGRKRRL 154
|
....
gi 1087497069 272 VAAR 275
Cdd:COG0823 155 TPAS 158
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
369-524 |
7.33e-09 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 57.37 E-value: 7.33e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 369 ADTNGKLDIYVYDRVSGT-TELgsvrsdgSQAQSDAFHASLSGDGRYLSFHTsgafgedDTGDVPDVYVRDRWTGTTKRV 447
Cdd:COG0823 5 LSRDGNSDIYVVDLDGGEpRRL-------TNSPGIDTSPAWSPDGRRIAFTS-------DRGGGPQIYVVDADGGEPRRL 70
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1087497069 448 SnahlggNANGESVRATFAADGLSIAFesnatdllaTADVDAFSDIYVVPLEGaGGSAPEWPVETVPSAAPGGAYVA 524
Cdd:COG0823 71 T------FGGGYNASPSWSPDGKRLAF---------VSRSDGRFDIYVLDLDG-GAPRRLTDGPGSPSWSPDGRRIV 131
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
128-299 |
1.03e-08 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 56.99 E-value: 1.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 128 VAFVSTSativegktNGFQDVFVRDRTTG-MTQLISlgsdgdqANGDSYAPMISMDGTYVLFSSkatnlvpgDTNSQEDL 206
Cdd:COG0823 1 LAFTLSR--------DGNSDIYVVDLDGGePRRLTN-------SPGIDTSPAWSPDGRRIAFTS--------DRGGGPQI 57
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 207 FLYDASTGKVQRIAERvPGSEYAGHGSPyqvstDGRFAAYVGNNGpesANNNILLKDLRTGAVKLVAartflydQTRARV 286
Cdd:COG0823 58 YVVDADGGEPRRLTFG-GGYNASPSWSP-----DGKRLAFVSRSD---GRFDIYVLDLDGGAPRRLT-------DGPGSP 121
|
170
....*....|...
gi 1087497069 287 SMSADARFLVFES 299
Cdd:COG0823 122 SWSPDGRRIVFSS 134
|
|
| COG4946 |
COG4946 |
Uncharacterized N-terminal domain of tricorn protease, contains WD40 repeats [Function unknown] ... |
727-971 |
1.15e-07 |
|
Uncharacterized N-terminal domain of tricorn protease, contains WD40 repeats [Function unknown];
Pssm-ID: 443973 [Multi-domain] Cd Length: 1072 Bit Score: 58.13 E-value: 1.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 727 DLALSdTNGKR-------DLFLYDRFSGKVQLISRTASGAAgdgesRDASMSGDGRYIVFTSDASnltadvdsnGQYDVF 799
Cdd:COG4946 306 SFALS-PDGKRvafeargEVFTVPAEKGPTRNLTNTPGVRE-----RLPAWSPDGKSIAYFSDAS---------GEYELY 370
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 800 LYDrdmngngiFDEEGDVslTRIStswdgKQADSYSYGPDISGDGTKVVFFTRARNLvqeppesttyNVsYDMETGALAP 879
Cdd:COG4946 371 IAP--------ADGSGEP--KQLT-----LGDLGRVFNPVWSPDGKKIAFTDNRGRL----------WV-VDLASGKVRK 424
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 880 IlLPDGKPLSAQNLVLNRDGSVAVFTTPEDllpedsNGDDDIYLYD-AGGMTLELVTargalGRAWPQRPAVDDSGRYVA 958
Cdd:COG4946 425 V-DTDGYGDGISDLAWSPDSKWLAYSKPGP------NQLSQIFLYDvETGKTVQLTD-----GRYDDGSPAFSPDGKYLY 492
|
250
....*....|....
gi 1087497069 959 FTVSRNT-PPYSQV 971
Cdd:COG4946 493 FLSSRDFnPTYGDL 506
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
898-1045 |
1.66e-07 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 53.52 E-value: 1.66e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 898 DGSVAVFTTpedllpeDSNGDDDIYLYDAGGMTLELVTARGalgrAWPQRPAVDDSGRYVAFTVSRNTppYSQVYVYDRE 977
Cdd:COG0823 41 DGRRIAFTS-------DRGGGPQIYVVDADGGEPRRLTFGG----GYNASPSWSPDGKRLAFVSRSDG--RFDIYVLDLD 107
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1087497069 978 kTGDAkyelisvvpqdREASMHSSDPDISRDGRYVSFHSNEPGlmegdgqGQSIFIRDRTEQVTKLAS 1045
Cdd:COG0823 108 -GGAP-----------RRLTDGPGSPSWSPDGRRIVFSSDRGG-------RPDLYVVDLDGRKRRLTP 156
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
2627-2846 |
2.18e-07 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 56.55 E-value: 2.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 2627 YRVTAEAAlqsyAGVPTGerYEAEVTVTAaDTTPPLPVEGLQVEVDAKRAL-LNWRLPRDPELVKVELrYKEQAASGEAG 2705
Cdd:COG3401 300 YRVTAVDA----AGNESA--PSNVVSVTT-DLTPPAAPSGLTATAVGSSSItLSWTASSDADVTGYNV-YRSTSGGGTYT 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 2706 EVEIPADQPFALVEGLSESTNYVFQILAYDAAGNYS--TAEVKASTGSPGSIGPDVTPPAAIREPSAKAAATEIeLTWSD 2783
Cdd:COG3401 372 KIAETVTTTSYTDTGLTPGTTYYYKVTAVDAAGNESapSEEVSATTASAASGESLTASVDAVPLTDVAGATAAA-SAASN 450
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1087497069 2784 PADPDLAIVNLQWTKTGQPFEGEPVDVRKGVGRFAITGLTPATEYEIRHWTVDESGNASTAES 2846
Cdd:COG3401 451 PGVSAAVLADGGDTGNAVPFTTTSSTVTATTTDTTTANLSVTTGSLVGGSGASSVTNSVSVIG 513
|
|
| COG4733 |
COG4733 |
Phage-related protein, tail protein J [Mobilome: prophages, transposons]; |
2627-2842 |
3.94e-07 |
|
Phage-related protein, tail protein J [Mobilome: prophages, transposons];
Pssm-ID: 443767 [Multi-domain] Cd Length: 978 Bit Score: 56.11 E-value: 3.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 2627 YRVTAEAALqsyaGVPTGERYEAEVTVTAaDTTPPLPVEGLQVEVDAKRALLNWRLPRDPELVKVELRYKEQAASGEAGE 2706
Cdd:COG4733 601 VRVRAINAL----GVSSAWAASSETTVTG-KTAPPPAPTGLTATGGLGGITLSWSFPVDADTLRTEIRYSTTGDWASATV 675
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 2707 VEIPADQPFALVEGLSESTNYVFQILAYDAAGNYSTAEVKASTgSPGSIGPDVTPPAAIREpSAKAAATEIELTWSDPAD 2786
Cdd:COG4733 676 AQALYPGNTYTLAGLKAGQTYYYRARAVDRSGNVSAWWVSGQA-SADAAGILDAITGQILE-TELGQELDAIIQNATVAE 753
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1087497069 2787 PDLAIVNLQWTKTGQPFEGEPVDVRKGVGRFAITGLTPATEYEIRHWTVDESGNAS 2842
Cdd:COG4733 754 VVAATVTDVTAQIDTAVLFAGVATAAAIGAEARVAATVAESATAAAATGTAADAAG 809
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1018-1280 |
7.36e-07 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 55.01 E-value: 7.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 1018 EPGLMEGDGQGQSIFIRDRTEQVTKLASRTYNPAVVPNDYASKARISGDGSWIAYNSNADNLVRGmeryrPGLYLGKVLE 1097
Cdd:COG3401 72 RAGTTSGVAAVAVAAAPPTATGLTTLTGSGSVGGATNTGLTSSDEVPSPAVGTATTATAVAGGAA-----TAGTYALGAG 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 1098 KETQAVWPAGSSLTVKASGADFVTLTWTPATGAKAYRILGAGAPVDGEEGVIektitgLMPGTDYLFKVEALDEAGV-WT 1176
Cdd:COG3401 147 LYGVDGANASGTTASSVAGAGVVVSPDTSATAAVATTSLTVTSTTLVDGGGD------IEPGTTYYYRVAATDTGGEsAP 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 1177 TNGPSVAFSTPAATDLAELAVTQQGSKAI-LVWgeRPGSPGGIHGFRVVRRTA-NEPAEVLATIEDPavrTYTDEAAESG 1254
Cdd:COG3401 221 SNEVSVTTPTTPPSAPTGLTATADTPGSVtLSW--DPVTESDATGYRVYRSNSgDGPFTKVATVTTT---SYTDTGLTNG 295
|
250 260
....*....|....*....|....*.
gi 1087497069 1255 KAYIYAVLALDAGGLATPYSVERSIT 1280
Cdd:COG3401 296 TTYYYRVTAVDAAGNESAPSNVVSVT 321
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
2661-2738 |
1.67e-06 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 48.38 E-value: 1.67e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 2661 PLPVEGLQV-EVDAKRALLNWRLPRDPELVKVELRYKEQAASGEAGEVEIPAD--QPFALVEGLSESTNYVFQILAYDAA 2737
Cdd:smart00060 1 PSPPSNLRVtDVTSTSVTLSWEPPPDDGITGYIVGYRVEYREEGSEWKEVNVTpsSTSYTLTGLKPGTEYEFRVRAVNGA 80
|
.
gi 1087497069 2738 G 2738
Cdd:smart00060 81 G 81
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
2663-2739 |
3.37e-06 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 47.41 E-value: 3.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 2663 PVEGLQV-EVDAKRALLNWRLPRDP--ELVKVELRYKEQAASGEAGEVEIPADQPFALVEGLSESTNYVFQILAYDAAGN 2739
Cdd:pfam00041 2 APSNLTVtDVTSTSLTVSWTPPPDGngPITGYEVEYRPKNSGEPWNEITVPGTTTSVTLTGLKPGTEYEVRVQAVNGGGE 81
|
|
| CarboxypepD_reg |
pfam13620 |
Carboxypeptidase regulatory-like domain; |
1569-1643 |
6.35e-06 |
|
Carboxypeptidase regulatory-like domain;
Pssm-ID: 433354 [Multi-domain] Cd Length: 81 Bit Score: 46.50 E-value: 6.35e-06
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1087497069 1569 LEGKVYQPNGTPLEGAVVTVV--QGGAKYTASTDAEGTYSLNVPSLGS-SVQAVADGVFPSVPQWIRAVPGRQ-TVDIQ 1643
Cdd:pfam13620 2 ISGTVTDPSGAPVPGATVTVTntDTGTVRTTTTDADGRYRFPGLPPGTyTVTVSAPGFKTATRTGVTVTAGQTtTLDVT 80
|
|
| COG4733 |
COG4733 |
Phage-related protein, tail protein J [Mobilome: prophages, transposons]; |
1105-1431 |
7.63e-06 |
|
Phage-related protein, tail protein J [Mobilome: prophages, transposons];
Pssm-ID: 443767 [Multi-domain] Cd Length: 978 Bit Score: 51.87 E-value: 7.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 1105 PAGSSLTVKASGADFVTL--TWTPATGAKAYRIL---GAGAPV-DGEEGVIEKTITGLMPGtDYLFKVEALDEAGV---W 1175
Cdd:COG4733 537 TTSESLSVVAQGTAVTTLtvSWDAPAGAVAYEVEwrrDDGNWVsVPRTSGTSFEVPGIYAG-DYEVRVRAINALGVssaW 615
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 1176 TTNGP-SVAFSTPAATDLAELAVTQQGSKAILVWGERPGSPggIHGFRVVRRTANEPAEVLATIEDPAVRTYTDEAAESG 1254
Cdd:COG4733 616 AASSEtTVTGKTAPPPAPTGLTATGGLGGITLSWSFPVDAD--TLRTEIRYSTTGDWASATVAQALYPGNTYTLAGLKAG 693
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 1255 KAYIYAVLALDAGGLATPYSVerSITLSAFVIDSFSHTLPLYFRKYAGVG-DLVRLVMKVKEADAARaeltfelpdggRT 1333
Cdd:COG4733 694 QTYYYRARAVDRSGNVSAWWV--SGQASADAAGILDAITGQILETELGQElDAIIQNATVAEVVAAT-----------VT 760
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 1334 TVKAVLTAQTASDTFIGQAAIPAHAVRLLQIRGFAERGGESAEASSLQ----GPIQIGGSVRVALKGAAALPHDATLTIG 1409
Cdd:COG4733 761 DVTAQIDTAVLFAGVATAAAIGAEARVAATVAESATAAAATGTAADAAgdasGGVTAGTSGTTGAGDTAASTTRVAAAVV 840
|
330 340
....*....|....*....|..
gi 1087497069 1410 SAGQRAYQTATIGEARQFSFVG 1431
Cdd:COG4733 841 LAGVVVYGDAIIESGNTGDIVA 862
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
957-1081 |
9.98e-06 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 48.13 E-value: 9.98e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 957 VAFTVSRNTppYSQVYVYDREkTGDAKyELISvvpqdreASMHSSDPDISRDGRYVSFHSNEPGlmegdgqGQSIFIRDR 1036
Cdd:COG0823 1 LAFTLSRDG--NSDIYVVDLD-GGEPR-RLTN-------SPGIDTSPAWSPDGRRIAFTSDRGG-------GPQIYVVDA 62
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1087497069 1037 ----TEQVTKLASRTYNPAVVPndyaskarisgDGSWIAYNSNADNLVR 1081
Cdd:COG0823 63 dggePRRLTFGGGYNASPSWSP-----------DGKRLAFVSRSDGRFD 100
|
|
| COG4733 |
COG4733 |
Phage-related protein, tail protein J [Mobilome: prophages, transposons]; |
505-871 |
2.38e-05 |
|
Phage-related protein, tail protein J [Mobilome: prophages, transposons];
Pssm-ID: 443767 [Multi-domain] Cd Length: 978 Bit Score: 50.33 E-value: 2.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 505 APEWPVETVPSA------APGGAYVAL--SWPEVPGAAYYKILQ---DGKL--AGITKEPRYAASGLLPGTaYTYRVAAG 571
Cdd:COG4733 528 PPQWPPVNVTTSeslsvvAQGTAVTTLtvSWDAPAGAVAYEVEWrrdDGNWvsVPRTSGTSFEVPGIYAGD-YEVRVRAI 606
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 572 SADFRWSGWSgEAAVRTLTAPETTPPGSGIVTATVQPGLIEAEWQLPNDPDVVGARlIWRMPGqSERQSAMYPKHVNRAK 651
Cdd:COG4733 607 NALGVSSAWA-ASSETTVTGKTAPPPAPTGLTATGGLGGITLSWSFPVDADTLRTE-IRYSTT-GDWASATVAQALYPGN 683
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 652 ---IPNVMNGEDYEVQIAVYDGDGNRslSGWQpisippgpaivrIDTRAEDGRAAPGEAvIEDMSEDGRYTVFISSAPDL 728
Cdd:COG4733 684 tytLAGLKAGQTYYYRARAVDRSGNV--SAWW------------VSGQASADAAGILDA-ITGQILETELGQELDAIIQN 748
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 729 ALSDTNGKRDLFLYDRFSGKVQLISRTASGAAGDGESRDASMSGDGRYIVFTSDASNLTADVDSNGQYDVFLYDRDMN-G 807
Cdd:COG4733 749 ATVAEVVAATVTDVTAQIDTAVLFAGVATAAAIGAEARVAATVAESATAAAATGTAADAAGDASGGVTAGTSGTTGAGdT 828
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1087497069 808 NGIFDEEGDVSLTRISTSWDGKQADSYSYGpdiSGDGTKVVFFTRARNLVQEPPESTTYNVSYD 871
Cdd:COG4733 829 AASTTRVAAAVVLAGVVVYGDAIIESGNTG---DIVATGDIASAAAGAVATTVSGTTAADVSAV 889
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1108-1173 |
3.12e-05 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 44.91 E-value: 3.12e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1087497069 1108 SSLTVKASGADFVTLTWTPATGAKA------YRILGAGA-----PVDGEEGVIEKTITGLMPGTDYLFKVEALDEAG 1173
Cdd:smart00060 5 SNLRVTDVTSTSVTLSWEPPPDDGItgyivgYRVEYREEgsewkEVNVTPSSTSYTLTGLKPGTEYEFRVRAVNGAG 81
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
2661-2738 |
8.66e-05 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 43.64 E-value: 8.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 2661 PLPVEGLQV-EVDAKRALLNWRLPRDP--ELVKVELRYKEQAASGEAGEVEIPADQPFALVEGLSESTNYVFQILAYDAA 2737
Cdd:cd00063 1 PSPPTNLRVtDVTSTSVTLSWTPPEDDggPITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNGG 80
|
.
gi 1087497069 2738 G 2738
Cdd:cd00063 81 G 81
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1105-1186 |
1.62e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 42.87 E-value: 1.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 1105 PAGSSLTVKASGADFVTLTWTPATGAKA--------YRILGAGAPVDGEEGVIEKT---ITGLMPGTDYLFKVEALDEAG 1173
Cdd:cd00063 2 SPPTNLRVTDVTSTSVTLSWTPPEDDGGpitgyvveYREKGSGDWKEVEVTPGSETsytLTGLKPGTEYEFRVRAVNGGG 81
|
90
....*....|...
gi 1087497069 1174 vWTTNGPSVAFST 1186
Cdd:cd00063 82 -ESPPSESVTVTT 93
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
2762-2831 |
2.48e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 42.22 E-value: 2.48e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1087497069 2762 PAAIREPSAKAA-ATEIELTWSDPADPDLA--IVNLQWTKTGQPFEGEPVDVRKGVGRFAITGLTPATEYEIR 2831
Cdd:smart00060 1 PSPPSNLRVTDVtSTSVTLSWEPPPDDGITgyIVGYRVEYREEGSEWKEVNVTPSSTSYTLTGLKPGTEYEFR 73
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
2762-2831 |
3.97e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 41.71 E-value: 3.97e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1087497069 2762 PAAIREPSAKAA-ATEIELTWSDPADPDLAIVN--LQWTKTGqpfEGEPVDVRKGVG---RFAITGLTPATEYEIR 2831
Cdd:cd00063 1 PSPPTNLRVTDVtSTSVTLSWTPPEDDGGPITGyvVEYREKG---SGDWKEVEVTPGsetSYTLTGLKPGTEYEFR 73
|
|
| SLH |
pfam00395 |
S-layer homology domain; |
3085-3125 |
5.21e-04 |
|
S-layer homology domain;
Pssm-ID: 459798 [Multi-domain] Cd Length: 42 Bit Score: 39.88 E-value: 5.21e-04
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 1087497069 3085 FDDVPADAWYAEAIAEASAAGVVVGDG-GKFRPNDPVSREEM 3125
Cdd:pfam00395 1 FKDVKSVAAWAEAVAALAELGIISGYPdGTFRPNEPITRAEA 42
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
369-675 |
6.17e-04 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 45.38 E-value: 6.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 369 ADTNGKLDIYVYDRVSGTTELGSVRSDGSQAQSDAFHASLSGDGRYLSFHTSGAFGEDDTGDVPDVYVRDRWTGTTKRVS 448
Cdd:COG3401 9 LDAGIAASAAANTAVNALSKAGGSGKTILVYLAVVLSVTTKESPGTLLVAAGLSSGGGLGTGGRAGTTSGVAAVAVAAAP 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 449 NAHLGGNANGESVRATFAADGLSIAFESNATDLLATADVDAFSDIYVVPLEGAGGSAPEWPVETVPSAAPGGAYVALSWP 528
Cdd:COG3401 89 PTATGLTTLTGSGSVGGATNTGLTSSDEVPSPAVGTATTATAVAGGAATAGTYALGAGLYGVDGANASGTTASSVAGAGV 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 529 EV-PGAAYYKILQDGKLAGITKEPRYAASGLLPGTAYTYRVAAGSaDFRWSGWSGEAAVRTLTAPETTPPGsgiVTATVQ 607
Cdd:COG3401 169 VVsPDTSATAAVATTSLTVTSTTLVDGGGDIEPGTTYYYRVAATD-TGGESAPSNEVSVTTPTTPPSAPTG---LTATAD 244
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1087497069 608 -PGLIEAEWQLPNDPDVVGARlIWRMPGQSERQSAMYPKHVNRAKIPNVMNGEDYEVQIAVYDGDGNRS 675
Cdd:COG3401 245 tPGSVTLSWDPVTESDATGYR-VYRSNSGDGPFTKVATVTTTSYTDTGLTNGTTYYYRVTAVDAAGNES 312
|
|
| DUF4998 |
pfam16389 |
Domain of unknown function; This family around 200 residues locates in the N-terminal of some ... |
2674-2831 |
6.88e-04 |
|
Domain of unknown function; This family around 200 residues locates in the N-terminal of some uncharacterized proteins in various Bacteroides and Parabacteroides species. The function of this family remains unknown.
Pssm-ID: 435316 [Multi-domain] Cd Length: 199 Bit Score: 43.46 E-value: 6.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 2674 KRALLNWRLPRDPELVKVELRYKEQAASGEageVEIPADQPF----ALVEGLSESTnYVFQILAYDAAGNYS-----TAE 2744
Cdd:pfam16389 33 NRAKLTWLLVSDPKIVKAKIFWNNGLDSLE---VPITRTAGVdtisVIIDNLPEGS-YTFSIRTYDKKGNSSvpsevTGT 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 2745 VKASTGSpgsigpdvtppAAIREPSAKAAA----TEIELTWSDPADPDLAIVNLQWTKTgqpfEGEPVDVR--KGVGRFA 2818
Cdd:pfam16389 109 VYGDSYQ-----------ASLTNRSLKSVEitagSNLTINWSPVLASALVGTEVTYTNN----DGKVKTVRikNGETQTV 173
|
170
....*....|...
gi 1087497069 2819 ITGLTPATEYEIR 2831
Cdd:pfam16389 174 LPDFKPGTSFKYR 186
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
1110-1174 |
7.91e-04 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 40.86 E-value: 7.91e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1087497069 1110 LTVKASGADFVTLTWTPATGAKA----YRIlgAGAPVDGEEGVIEK---------TITGLMPGTDYLFKVEALDEAGV 1174
Cdd:pfam00041 6 LTVTDVTSTSLTVSWTPPPDGNGpitgYEV--EYRPKNSGEPWNEItvpgtttsvTLTGLKPGTEYEVRVQAVNGGGE 81
|
|
| Big_5 |
pfam13205 |
Bacterial Ig-like domain; |
2544-2640 |
8.22e-04 |
|
Bacterial Ig-like domain;
Pssm-ID: 463809 [Multi-domain] Cd Length: 105 Bit Score: 41.21 E-value: 8.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 2544 ISTLPArPIKTSVAPGgASIELLFDRHVRSEAADDGLLVVVSEESGEEVAGEWQAlepiaingaqASARLRFTPDDPLTV 2623
Cdd:pfam13205 8 VSTTPA-DGATNVAVN-SSITVTFSEAIDPATVNAAVVIVLSDGAGVPVTGTVSV----------DGKTVTITPSAALAA 75
|
90
....*....|....*..
gi 1087497069 2624 GAVYRVTAEAALQSYAG 2640
Cdd:pfam13205 76 NTTYTVTITAGIKDLAG 92
|
|
| COG3979 |
COG3979 |
Chitodextrinase [Carbohydrate transport and metabolism]; |
1106-1198 |
1.32e-03 |
|
Chitodextrinase [Carbohydrate transport and metabolism];
Pssm-ID: 443178 [Multi-domain] Cd Length: 369 Bit Score: 43.99 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 1106 AGSSLTVKASGADFVTLTWTPATGAKA---YRILGAGAPVDGEEGVIEKTITGLMPGTDYLFKVEALDEAGVWTTNGPSV 1182
Cdd:COG3979 5 APTGLTASNVTSSSVSLSWDASTDNVGvtgYDVYRGGDQVATVTGLTAWTVTGLTPGTEYTFTVGACDAAGNVSAASGTS 84
|
90
....*....|....*.
gi 1087497069 1183 AFSTPAATDLAELAVT 1198
Cdd:COG3979 85 TAMFGGSSTTLGSAEG 100
|
|
| COG4946 |
COG4946 |
Uncharacterized N-terminal domain of tricorn protease, contains WD40 repeats [Function unknown] ... |
86-314 |
1.37e-03 |
|
Uncharacterized N-terminal domain of tricorn protease, contains WD40 repeats [Function unknown];
Pssm-ID: 443973 [Multi-domain] Cd Length: 1072 Bit Score: 44.64 E-value: 1.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 86 GKRdlaAALTAKGgtEKISISV-NGAA----ATGDSRASSI--SGDGRYVAFVSTSativegktNGFQDVFVRDrTTGMT 158
Cdd:COG4946 313 GKR---VAFEARG--EVFTVPAeKGPTrnltNTPGVRERLPawSPDGKSIAYFSDA--------SGEYELYIAP-ADGSG 378
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 159 QLISLGSDGDqanGDSYAPMISMDGTYVLFSSKATNlvpgdtnsqedLFLYDASTGKVQRIAErvpgSEYAGHGSPYQVS 238
Cdd:COG4946 379 EPKQLTLGDL---GRVFNPVWSPDGKKIAFTDNRGR-----------LWVVDLASGKVRKVDT----DGYGDGISDLAWS 440
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 239 TDGRFAAYVGNNGpeSANNNILLKDLRTGAVKLVaartflydqTRARVSM-----SADARFLVFESFQreltldDYGLNY 313
Cdd:COG4946 441 PDSKWLAYSKPGP--NQLSQIFLYDVETGKTVQL---------TDGRYDDgspafSPDGKYLYFLSSR------DFNPTY 503
|
.
gi 1087497069 314 G 314
Cdd:COG4946 504 G 504
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1108-1198 |
4.91e-03 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 42.68 E-value: 4.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1087497069 1108 SSLTVKASGADFVTLTWTPATG--AKAYRILGAGAPVDGEEGVIEK------TITGLMPGTDYLFKVEALDEAGVWTTNG 1179
Cdd:COG3401 331 SGLTATAVGSSSITLSWTASSDadVTGYNVYRSTSGGGTYTKIAETvtttsyTDTGLTPGTTYYYKVTAVDAAGNESAPS 410
|
90
....*....|....*....
gi 1087497069 1180 PSVAFSTPAATDLAELAVT 1198
Cdd:COG3401 411 EEVSATTASAASGESLTAS 429
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
2764-2831 |
9.14e-03 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 37.78 E-value: 9.14e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1087497069 2764 AIREPSAKAA-ATEIELTWSDPADPDLAIVN--LQWTKTGQPFEGEPVDVRKGVGRFAITGLTPATEYEIR 2831
Cdd:pfam00041 2 APSNLTVTDVtSTSLTVSWTPPPDGNGPITGyeVEYRPKNSGEPWNEITVPGTTTSVTLTGLKPGTEYEVR 72
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
422-500 |
9.55e-03 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 39.66 E-value: 9.55e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1087497069 422 AFGEDDTGDvPDVYVRDRWTGTTKRVSNAhlggnaNGESVRATFAADGLSIAFESNATDLlatadvdafSDIYVVPLEG 500
Cdd:COG0823 2 AFTLSRDGN-SDIYVVDLDGGEPRRLTNS------PGIDTSPAWSPDGRRIAFTSDRGGG---------PQIYVVDADG 64
|
|
| Ca_tandemer |
NF033510 |
Ca2+-stabilized adhesin repeat; This repeat is found in proteins such as the ... |
1583-1622 |
9.76e-03 |
|
Ca2+-stabilized adhesin repeat; This repeat is found in proteins such as the biofilm-associated protein Bap of Acinetobacter baumannii (which can exceed 8000 amino acids in length), the calcium-stabilized ice-binding adhesin of the Antarctic bacterium Marinomonas primoryensis, and the giant calcium-binding adhesin SiiE of Salmonella enterica.
Pssm-ID: 411149 [Multi-domain] Cd Length: 97 Bit Score: 38.04 E-value: 9.76e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 1087497069 1583 GAVVTVVQGGAKYTASTDAEGTYSLNVPSlgSSVQAVADG 1622
Cdd:NF033510 44 GQTVTVTLNGKTYTATVDADGSWSVTVPA--ADLAALADG 81
|
|
| |
