|
Name |
Accession |
Description |
Interval |
E-value |
| MCM |
smart00350 |
minichromosome maintenance proteins; |
166-738 |
0e+00 |
|
minichromosome maintenance proteins;
Pssm-ID: 214631 [Multi-domain] Cd Length: 509 Bit Score: 672.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 166 LSPRTLTAQHLNKLVSVEGIVTKTSLVRPKLIRS---VHYAAKTGRFHYRDYTDATTTLttRIPTPAIYPTedtegnKLT 242
Cdd:smart00350 3 SSIRELRADHLGKLVRISGIVTRTSGVRPKLKRAsftCEKCGATLGPEIQSGRETEPTV--CPPRECQSPT------PFS 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 243 TEYGYSTFIDHQRITVQEMPEMAPAGQLPRSIDVILDDDLVDKTKPGDRVNVVGVFKSLGAGGmNQSNSNTLIGFKTLIL 322
Cdd:smart00350 75 LNHERSTFIDFQKIKLQESPEEVPVGQLPRSVDVILDGDLVDKAKPGDRVEVTGIYRNVPYGF-KLNTVKGLPVFATYIE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 323 GNTVYPL-HARSTGVAARQ--MLTDFDIRNINKLSKKKDIFDILSQSLAPSIYGHDHIKKAILLMLMGGVEKNLENGSHL 399
Cdd:smart00350 154 ANHVRKLdYKRSFEDSSFSvqSLSDEEEEEIRKLSKDPDIYERLARSLAPSIYGHEDIKKAILLLLFGGVHKNLPDGMKI 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 400 RGDINILMVGDPSTAKSQLLRFVLNTASLAIATTGRGSSGVGLTAAVTTDRETGERRLEAGAMVLADRGVVCIDEFDKMT 479
Cdd:smart00350 234 RGDINILLCGDPGTAKSQLLKYVEKTAPRAVYTTGKGSSAVGLTAAVTRDPETREFTLEAGALVLADNGVCCIDEFDKMD 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 480 DVDRVAIHEVMEQQTVTIAKAGIHTTLNARCSVIAAANPVFGQYDVNRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDR 559
Cdd:smart00350 314 DSDRTAIHEAMEQQTISIAKAGITTTLNARCSVLAAANPIGGRYDPKLTPEENIDLPAPILSRFDLLFVVLDEVDEERDR 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 560 SISEHVLRTHRYLPPgylegepvrerlnlslavgedadinpeehsnsgagveNEGEDDEdhvfekfnpllqagaklaknk 639
Cdd:smart00350 394 ELAKHVVDLHRYSHP-------------------------------------EEDEAFE--------------------- 415
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 640 gnyngteipKLVTIPFLRKYVQYAKERVIPQLTQEAINVIVKNYTDLRNDDN----TKKSPITARTLETLIRLATAHAKV 715
Cdd:smart00350 416 ---------PPLSQEKLRKYIAYAREKIKPKLSEEAADKLVKAYVDLRKEDSqtesRSSIPITVRQLESIIRLSEAHAKM 486
|
570 580
....*....|....*....|...
gi 1134776453 716 RLSKTVNKVDAKVAANLLRFALL 738
Cdd:smart00350 487 RLSDVVEEADVEEAIRLLRESII 509
|
|
| MCM3 |
cd17754 |
DNA replication licensing factor Mcm3; Mcm3 is a helicase that play an important role in ... |
362-736 |
0e+00 |
|
DNA replication licensing factor Mcm3; Mcm3 is a helicase that play an important role in replication. It is part of the heterohexameric ring-shaped Mcm2-7 complex, which is part of the replicative helicase that unwinds parental double-stranded DNA at a replication fork to provide single-stranded DNA templates for the replicative polymerases.
Pssm-ID: 350660 [Multi-domain] Cd Length: 299 Bit Score: 542.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 362 ILSQSLAPSIYGHDHIKKAILLMLMGGVEKNLENGSHLRGDINILMVGDPSTAKSQLLRFVLNTASLAIATTGRGSSGVG 441
Cdd:cd17754 1 LLSKSLAPSIYGHEYIKKAILLMLLGGVEKNLENGSHLRGDINILLVGDPSVAKSQLLRYVLNTAPLAIATTGRGSSGVG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 442 LTAAVTTDRETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEVMEQQTVTIAKAGIHTTLNARCSVIAAANPVFG 521
Cdd:cd17754 81 LTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRVAIHEVMEQQTVTIAKAGIHASLNARCSVLAAANPVYG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 522 QYDVNRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLRTHRYlppgylegepvrerlnlslavgedadinpe 601
Cdd:cd17754 161 RYDVYKTPMENIGLPDSLLSRFDLLFIVLDDIDEERDRSISEHVLRMHRY------------------------------ 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 602 ehsnsgagvenegeddedhvfekfnpllqagaklaknkgnyngteipklvtIPFLRKYVQYAKERVIPQLTQEAINVIVK 681
Cdd:cd17754 211 ---------------------------------------------------IKFLRKYIHYAKERIKPKLTQEAAEYIAE 239
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 682 NYTDLRNDDNTKK-----SPITARTLETLIRLATAHAKVRLSKTVNKVDAKVAANLLRFA 736
Cdd:cd17754 240 EYADLRNDDNTKTdkartSPITARTLETLIRLATAHAKARLSKTVDKVDAEVALNLLRFA 299
|
|
| Mcm2 |
COG1241 |
DNA replicative helicase MCM subunit Mcm2, Cdc46/Mcm family [Replication, recombination and ... |
96-747 |
1.77e-172 |
|
DNA replicative helicase MCM subunit Mcm2, Cdc46/Mcm family [Replication, recombination and repair];
Pssm-ID: 440854 [Multi-domain] Cd Length: 682 Bit Score: 518.59 E-value: 1.77e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 96 IIISLDDLREFDRSFWSGILVEPAYFIPPAEKAL-----TDLADSMDDVpHPNASAVSSRHPwklsfkgsfgahalsPRT 170
Cdd:COG1241 35 LVVDYNDLYSFDPDLADDLLENPDEVLEAAEEALreidlEPYDVSLGDA-HVRITNLPETVP---------------IRD 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 171 LTAQHLNKLVSVEGIVTKTSLVRPKLIRSVHYAAKTGRFHYRDytdattTLTTRIPTPAIYPtEDTEGNKLTTEYGYSTF 250
Cdd:COG1241 99 IRSDHIGKLISVEGIVRKATEVKPKITEAAFECPRCGTETYVP------QTGEKLQEPHECP-GCGRQGPFKLLPEKSEF 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 251 IDHQRITVQEMPEMAPAGQLPRSIDVILDDDLVDKTKPGDRVNVVGVFKSLGAGGMNQSNSNtligFKTLILGNTVYPLH 330
Cdd:COG1241 172 IDAQKIRIQEPPEDLPGGQQPQSIDVILEDDLVGEVRPGDRVTVTGILRIEQRTSGRGKSTI----FDLYLEANSIEVEE 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 331 ARSTGVAarqmLTDFDIRNINKLSKKKDIFDILSQSLAPSIYGHDHIKKAILLMLMGGVEKNLENGSHLRGDINILMVGD 410
Cdd:COG1241 248 KEFEEIE----ITEEDEEKIKELSKDPDIYEKIIASIAPSIYGYEEIKEAIALQLFGGVPKVLPDGSRIRGDIHILLVGD 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 411 PSTAKSQLLRFVLNTASLAIATTGRGSSGVGLTAAVTTD-RETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEV 489
Cdd:COG1241 324 PGTAKSQLLRYAARLAPRGVYTSGKGSTAAGLTAAAVRDdFGTGRWTLEAGALVLADGGLACIDELDKMREEDRSALHEA 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 490 MEQQTVTIAKAGIHTTLNARCSVIAAANPVFGQYDVNRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLRTH 569
Cdd:COG1241 404 MEQQTISIAKAGIVATLNARCSVLAAANPKYGRFDPYEPIAEQIDLPPTLLSRFDLIFVLRDKPDEERDRELARHILKVH 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 570 RylppgylegepvrerlnlslavgedadinpeehsnsgAGVENEGEDDEDHvfEKFNPllqagaklaknkgnyngtEIPK 649
Cdd:COG1241 484 R-------------------------------------AGELLEQEIEEET--EEVKP------------------EIDP 506
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 650 lvtiPFLRKYVQYAKERVIPQLTQEAINVIVKNYTDLRNDDNTKKS--PITARTLETLIRLATAHAKVRLSKTVNKVDAK 727
Cdd:COG1241 507 ----DLLRKYIAYARRNVFPVLTEEAKDLIEDFYVDMRKKGEDEDSpvPITARQLEALIRLAEASARMRLSDTVTEEDAE 582
|
650 660
....*....|....*....|
gi 1134776453 728 VAANLLRFALlgEDIGNDID 747
Cdd:COG1241 583 RAIRLVDSCL--KDVGVDPE 600
|
|
| minchrom_main_MCM |
NF040949 |
minichromosome maintenance protein MCM; |
93-747 |
1.72e-157 |
|
minichromosome maintenance protein MCM;
Pssm-ID: 468880 [Multi-domain] Cd Length: 681 Bit Score: 479.81 E-value: 1.72e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 93 PHRIIISLDDLREFDRSFWSGILVEPAYFIPPAEKALTDLADSMDdvphpnASAVSSRHPWKLSFKGSFgaHALSPRTLT 172
Cdd:NF040949 33 KRSLVVDFNDLYMFDPELADLLIEKPDEVLPAASKALKEIVEEED------PEYAEEVAKFHVRFRNLP--RTVPLRDLR 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 173 AQHLNKLVSVEGIVTKTSLVRPKLIRSVHYAAKTGRfhYRDYTDATTTLTTRIPTPAIYPtEDTEGNKLTTEYGYSTFID 252
Cdd:NF040949 105 SEYIGKLIAVEGIVTRTTPVKPRIVKAVFRCRDCGC--EFEWPEEEEESYEIVEPPTVCP-VCGKPGSFRLLQEKSKFID 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 253 HQRITVQEMPEMAPAGQLPRSIDVILDDDLVDKTKPGDRVNVVGVFKsLGAGGMNQSNSNTLigFKTLILGNTVYPlhar 332
Cdd:NF040949 182 WQKIVVQERPEELPPGQLPRSIEVVLEDDLVDTARPGDRVTVTGILR-IKPDSSLKKGSRPI--FKNYIEANHIEV---- 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 333 STGVAARQMLTDFDIRNINKLSKKKDIFDILSQSLAPSIYGHDHIKKAILLMLMGGVEKNLENGSHLRGDINILMVGDPS 412
Cdd:NF040949 255 SQKELEEVEITEEDEEKILELAKDPWIREKIIASIAPSIYGHWEIKEAIALLLFGGVPKVLPDGTRIRGDIHVLIVGDPG 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 413 TAKSQLLRFVLNTASLAIATTGRGSSGVGLTAAVTTDRETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEVMEQ 492
Cdd:NF040949 335 TAKSQLLQYVARLAPRAVYTSGKGSTAAGLTAAVVRDKLTGEYYLEAGALVLADGGVAVIDEIDKMREEDRSAIHEAMEQ 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 493 QTVTIAKAGIHTTLNARCSVIAAANPVFGQYDVNRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLRTHRyl 572
Cdd:NF040949 415 QTVSIAKAGIVATLNARASVLAAGNPKFGRYDPNRSVAENIDLPPTILSRFDLIFVIRDKPNEERDRRLARHILDVHS-- 492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 573 ppgylEGEPVRErlnlslavgedaDINPEehsnsgagvenegeddedhvfekfnpllqagaklaknkgnyngteipklvt 652
Cdd:NF040949 493 -----GKEKVKP------------EIDPD--------------------------------------------------- 504
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 653 ipFLRKYVQYAKERVIPQLTQEAINVIVKNYTDLRNDDNTKKS-----PITARTLETLIRLATAHAKVRLSKTVNKVDAK 727
Cdd:NF040949 505 --LLKKYIAYARKYVRPKLTEEAKKLIEDFYVEMRKSSKSSEDpdspiPITARQLEALIRLSEAHAKMRLKDEVTAEDAE 582
|
650 660
....*....|....*....|
gi 1134776453 728 VAANLLRFALlgEDIGNDID 747
Cdd:NF040949 583 RAIRLMLAFL--ESVGIDVE 600
|
|
| MCM |
pfam00493 |
MCM P-loop domain; |
346-569 |
4.55e-129 |
|
MCM P-loop domain;
Pssm-ID: 459830 [Multi-domain] Cd Length: 224 Bit Score: 388.81 E-value: 4.55e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 346 DIRNINKLSKKKDIFDILSQSLAPSIYGHDHIKKAILLMLMGGVEKNLENGSHLRGDINILMVGDPSTAKSQLLRFVLNT 425
Cdd:pfam00493 1 DEEEIKELAKRPDIYDKLADSIAPSIYGHEDVKKAILLQLFGGVKKILPDGTRLRGDINVLLVGDPGTAKSQLLKYVEKI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 426 ASLAIATTGRGSSGVGLTAAVTTDRETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEVMEQQTVTIAKAGIHTT 505
Cdd:pfam00493 81 APRAVYTSGKGSSAAGLTAAVVRDPVTGEFVLEAGALVLADGGVCCIDEFDKMNDEDRVALHEAMEQQTISIAKAGIVAT 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1134776453 506 LNARCSVIAAANPVFGQYDVNRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLRTH 569
Cdd:pfam00493 161 LNARCSILAAANPIFGRYDPKKSIAENINLPPPLLSRFDLIFVLLDKPDEEKDERLAKHIVDLH 224
|
|
| PTZ00111 |
PTZ00111 |
DNA replication licensing factor MCM4; Provisional |
286-736 |
1.21e-69 |
|
DNA replication licensing factor MCM4; Provisional
Pssm-ID: 173403 [Multi-domain] Cd Length: 915 Bit Score: 249.91 E-value: 1.21e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 286 TKPGDRVNVVGVFKS----------------------LGAGGMNQSNSNTLI-GFKTLilGNtvyplharstgvaaRQML 342
Cdd:PTZ00111 360 VKTGDRVTVVGILKVtpirtsttrrtlkslytyfvnvIHVKVINSTNANQPEkGLKYL--GN--------------ENDF 423
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 343 TDFDIRNINKLSKKKDIFDILSQSLAPSIYGHDHIKKAILLMLMGGVEKNLENG---------SHLRGDINILMVGDPST 413
Cdd:PTZ00111 424 SDLQVYKILELSRNPMIYRILLDSFAPSIKARNNVKIGLLCQLFSGNKNSSDFNkspdacykvDNFRGIINVLLCGDPGT 503
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 414 AKSQLLRFVLNTASLAIATTGRGSSGVGLTAAVT-TDRETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEVMEQ 492
Cdd:PTZ00111 504 AKSQLLHYTHLLSPRSIYTSGKSSSSVGLTASIKfNESDNGRAMIQPGAVVLANGGVCCIDELDKCHNESRLSLYEVMEQ 583
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 493 QTVTIAKAGIHTTLNARCSVIAAANPVFGQYDVNRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLRThrYL 572
Cdd:PTZ00111 584 QTVTIAKAGIVATLKAETAILASCNPINSRYNKNKAVIENINISPSLFTRFDLIYLVLDHIDQDTDQLISLSIAKD--FL 661
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 573 PPgylegepvrerlnlslavgedadinpeehSNSGAGvenegeDDEDhVFEKFNPLLQAGAKLAKNKgNYNGTEipklvt 652
Cdd:PTZ00111 662 LP-----------------------------HMTGSG------NDED-TYDRSNTMHVEDESLRSEK-DYNKND------ 698
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 653 IPFLRKYVQYAKERVIPQLTQEAINVIVKNYTDLR------------------NDDN-------TKKSPITARTLETLIR 707
Cdd:PTZ00111 699 LDMLRMYIKFSKLHCFPKLSDEAKKVITREYVKMRqgnfqtsnldelehaqedDDDDlyyqssgTRMIYVSSRMISSIIR 778
|
490 500
....*....|....*....|....*....
gi 1134776453 708 LATAHAKVRLSKTVNKVDAKVAANLLRFA 736
Cdd:PTZ00111 779 ISVSLARMRLSTVVTPADALQAVQIVKSS 807
|
|
| MCM_N |
pfam14551 |
MCM N-terminal domain; This family contains the N-terminal domain of MCM proteins. |
25-143 |
9.92e-06 |
|
MCM N-terminal domain; This family contains the N-terminal domain of MCM proteins.
Pssm-ID: 464206 [Multi-domain] Cd Length: 95 Bit Score: 44.98 E-value: 9.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 25 VRRFQEFLDTFTS-------YRDSVRSIqvynsnnaanynddqddaderdllgdddgddLEKEKkaasstslnilpHRII 97
Cdd:pfam14551 1 KRKFKDFLEEFREdgdgefkYRDQLREM-------------------------------IEREQ------------RSLE 37
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1134776453 98 ISLDDLREFDRSFWSGILVEPAYFIPPAEKALTDLADSMDDVPHPN 143
Cdd:pfam14551 38 VDLDDLREFDPDLAEALLENPYEYLPLFEEALKEVVKELSEDPDYA 83
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| MCM |
smart00350 |
minichromosome maintenance proteins; |
166-738 |
0e+00 |
|
minichromosome maintenance proteins;
Pssm-ID: 214631 [Multi-domain] Cd Length: 509 Bit Score: 672.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 166 LSPRTLTAQHLNKLVSVEGIVTKTSLVRPKLIRS---VHYAAKTGRFHYRDYTDATTTLttRIPTPAIYPTedtegnKLT 242
Cdd:smart00350 3 SSIRELRADHLGKLVRISGIVTRTSGVRPKLKRAsftCEKCGATLGPEIQSGRETEPTV--CPPRECQSPT------PFS 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 243 TEYGYSTFIDHQRITVQEMPEMAPAGQLPRSIDVILDDDLVDKTKPGDRVNVVGVFKSLGAGGmNQSNSNTLIGFKTLIL 322
Cdd:smart00350 75 LNHERSTFIDFQKIKLQESPEEVPVGQLPRSVDVILDGDLVDKAKPGDRVEVTGIYRNVPYGF-KLNTVKGLPVFATYIE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 323 GNTVYPL-HARSTGVAARQ--MLTDFDIRNINKLSKKKDIFDILSQSLAPSIYGHDHIKKAILLMLMGGVEKNLENGSHL 399
Cdd:smart00350 154 ANHVRKLdYKRSFEDSSFSvqSLSDEEEEEIRKLSKDPDIYERLARSLAPSIYGHEDIKKAILLLLFGGVHKNLPDGMKI 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 400 RGDINILMVGDPSTAKSQLLRFVLNTASLAIATTGRGSSGVGLTAAVTTDRETGERRLEAGAMVLADRGVVCIDEFDKMT 479
Cdd:smart00350 234 RGDINILLCGDPGTAKSQLLKYVEKTAPRAVYTTGKGSSAVGLTAAVTRDPETREFTLEAGALVLADNGVCCIDEFDKMD 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 480 DVDRVAIHEVMEQQTVTIAKAGIHTTLNARCSVIAAANPVFGQYDVNRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDR 559
Cdd:smart00350 314 DSDRTAIHEAMEQQTISIAKAGITTTLNARCSVLAAANPIGGRYDPKLTPEENIDLPAPILSRFDLLFVVLDEVDEERDR 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 560 SISEHVLRTHRYLPPgylegepvrerlnlslavgedadinpeehsnsgagveNEGEDDEdhvfekfnpllqagaklaknk 639
Cdd:smart00350 394 ELAKHVVDLHRYSHP-------------------------------------EEDEAFE--------------------- 415
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 640 gnyngteipKLVTIPFLRKYVQYAKERVIPQLTQEAINVIVKNYTDLRNDDN----TKKSPITARTLETLIRLATAHAKV 715
Cdd:smart00350 416 ---------PPLSQEKLRKYIAYAREKIKPKLSEEAADKLVKAYVDLRKEDSqtesRSSIPITVRQLESIIRLSEAHAKM 486
|
570 580
....*....|....*....|...
gi 1134776453 716 RLSKTVNKVDAKVAANLLRFALL 738
Cdd:smart00350 487 RLSDVVEEADVEEAIRLLRESII 509
|
|
| MCM3 |
cd17754 |
DNA replication licensing factor Mcm3; Mcm3 is a helicase that play an important role in ... |
362-736 |
0e+00 |
|
DNA replication licensing factor Mcm3; Mcm3 is a helicase that play an important role in replication. It is part of the heterohexameric ring-shaped Mcm2-7 complex, which is part of the replicative helicase that unwinds parental double-stranded DNA at a replication fork to provide single-stranded DNA templates for the replicative polymerases.
Pssm-ID: 350660 [Multi-domain] Cd Length: 299 Bit Score: 542.44 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 362 ILSQSLAPSIYGHDHIKKAILLMLMGGVEKNLENGSHLRGDINILMVGDPSTAKSQLLRFVLNTASLAIATTGRGSSGVG 441
Cdd:cd17754 1 LLSKSLAPSIYGHEYIKKAILLMLLGGVEKNLENGSHLRGDINILLVGDPSVAKSQLLRYVLNTAPLAIATTGRGSSGVG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 442 LTAAVTTDRETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEVMEQQTVTIAKAGIHTTLNARCSVIAAANPVFG 521
Cdd:cd17754 81 LTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDIDRVAIHEVMEQQTVTIAKAGIHASLNARCSVLAAANPVYG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 522 QYDVNRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLRTHRYlppgylegepvrerlnlslavgedadinpe 601
Cdd:cd17754 161 RYDVYKTPMENIGLPDSLLSRFDLLFIVLDDIDEERDRSISEHVLRMHRY------------------------------ 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 602 ehsnsgagvenegeddedhvfekfnpllqagaklaknkgnyngteipklvtIPFLRKYVQYAKERVIPQLTQEAINVIVK 681
Cdd:cd17754 211 ---------------------------------------------------IKFLRKYIHYAKERIKPKLTQEAAEYIAE 239
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 682 NYTDLRNDDNTKK-----SPITARTLETLIRLATAHAKVRLSKTVNKVDAKVAANLLRFA 736
Cdd:cd17754 240 EYADLRNDDNTKTdkartSPITARTLETLIRLATAHAKARLSKTVDKVDAEVALNLLRFA 299
|
|
| Mcm2 |
COG1241 |
DNA replicative helicase MCM subunit Mcm2, Cdc46/Mcm family [Replication, recombination and ... |
96-747 |
1.77e-172 |
|
DNA replicative helicase MCM subunit Mcm2, Cdc46/Mcm family [Replication, recombination and repair];
Pssm-ID: 440854 [Multi-domain] Cd Length: 682 Bit Score: 518.59 E-value: 1.77e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 96 IIISLDDLREFDRSFWSGILVEPAYFIPPAEKAL-----TDLADSMDDVpHPNASAVSSRHPwklsfkgsfgahalsPRT 170
Cdd:COG1241 35 LVVDYNDLYSFDPDLADDLLENPDEVLEAAEEALreidlEPYDVSLGDA-HVRITNLPETVP---------------IRD 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 171 LTAQHLNKLVSVEGIVTKTSLVRPKLIRSVHYAAKTGRFHYRDytdattTLTTRIPTPAIYPtEDTEGNKLTTEYGYSTF 250
Cdd:COG1241 99 IRSDHIGKLISVEGIVRKATEVKPKITEAAFECPRCGTETYVP------QTGEKLQEPHECP-GCGRQGPFKLLPEKSEF 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 251 IDHQRITVQEMPEMAPAGQLPRSIDVILDDDLVDKTKPGDRVNVVGVFKSLGAGGMNQSNSNtligFKTLILGNTVYPLH 330
Cdd:COG1241 172 IDAQKIRIQEPPEDLPGGQQPQSIDVILEDDLVGEVRPGDRVTVTGILRIEQRTSGRGKSTI----FDLYLEANSIEVEE 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 331 ARSTGVAarqmLTDFDIRNINKLSKKKDIFDILSQSLAPSIYGHDHIKKAILLMLMGGVEKNLENGSHLRGDINILMVGD 410
Cdd:COG1241 248 KEFEEIE----ITEEDEEKIKELSKDPDIYEKIIASIAPSIYGYEEIKEAIALQLFGGVPKVLPDGSRIRGDIHILLVGD 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 411 PSTAKSQLLRFVLNTASLAIATTGRGSSGVGLTAAVTTD-RETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEV 489
Cdd:COG1241 324 PGTAKSQLLRYAARLAPRGVYTSGKGSTAAGLTAAAVRDdFGTGRWTLEAGALVLADGGLACIDELDKMREEDRSALHEA 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 490 MEQQTVTIAKAGIHTTLNARCSVIAAANPVFGQYDVNRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLRTH 569
Cdd:COG1241 404 MEQQTISIAKAGIVATLNARCSVLAAANPKYGRFDPYEPIAEQIDLPPTLLSRFDLIFVLRDKPDEERDRELARHILKVH 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 570 RylppgylegepvrerlnlslavgedadinpeehsnsgAGVENEGEDDEDHvfEKFNPllqagaklaknkgnyngtEIPK 649
Cdd:COG1241 484 R-------------------------------------AGELLEQEIEEET--EEVKP------------------EIDP 506
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 650 lvtiPFLRKYVQYAKERVIPQLTQEAINVIVKNYTDLRNDDNTKKS--PITARTLETLIRLATAHAKVRLSKTVNKVDAK 727
Cdd:COG1241 507 ----DLLRKYIAYARRNVFPVLTEEAKDLIEDFYVDMRKKGEDEDSpvPITARQLEALIRLAEASARMRLSDTVTEEDAE 582
|
650 660
....*....|....*....|
gi 1134776453 728 VAANLLRFALlgEDIGNDID 747
Cdd:COG1241 583 RAIRLVDSCL--KDVGVDPE 600
|
|
| minchrom_main_MCM |
NF040949 |
minichromosome maintenance protein MCM; |
93-747 |
1.72e-157 |
|
minichromosome maintenance protein MCM;
Pssm-ID: 468880 [Multi-domain] Cd Length: 681 Bit Score: 479.81 E-value: 1.72e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 93 PHRIIISLDDLREFDRSFWSGILVEPAYFIPPAEKALTDLADSMDdvphpnASAVSSRHPWKLSFKGSFgaHALSPRTLT 172
Cdd:NF040949 33 KRSLVVDFNDLYMFDPELADLLIEKPDEVLPAASKALKEIVEEED------PEYAEEVAKFHVRFRNLP--RTVPLRDLR 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 173 AQHLNKLVSVEGIVTKTSLVRPKLIRSVHYAAKTGRfhYRDYTDATTTLTTRIPTPAIYPtEDTEGNKLTTEYGYSTFID 252
Cdd:NF040949 105 SEYIGKLIAVEGIVTRTTPVKPRIVKAVFRCRDCGC--EFEWPEEEEESYEIVEPPTVCP-VCGKPGSFRLLQEKSKFID 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 253 HQRITVQEMPEMAPAGQLPRSIDVILDDDLVDKTKPGDRVNVVGVFKsLGAGGMNQSNSNTLigFKTLILGNTVYPlhar 332
Cdd:NF040949 182 WQKIVVQERPEELPPGQLPRSIEVVLEDDLVDTARPGDRVTVTGILR-IKPDSSLKKGSRPI--FKNYIEANHIEV---- 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 333 STGVAARQMLTDFDIRNINKLSKKKDIFDILSQSLAPSIYGHDHIKKAILLMLMGGVEKNLENGSHLRGDINILMVGDPS 412
Cdd:NF040949 255 SQKELEEVEITEEDEEKILELAKDPWIREKIIASIAPSIYGHWEIKEAIALLLFGGVPKVLPDGTRIRGDIHVLIVGDPG 334
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 413 TAKSQLLRFVLNTASLAIATTGRGSSGVGLTAAVTTDRETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEVMEQ 492
Cdd:NF040949 335 TAKSQLLQYVARLAPRAVYTSGKGSTAAGLTAAVVRDKLTGEYYLEAGALVLADGGVAVIDEIDKMREEDRSAIHEAMEQ 414
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 493 QTVTIAKAGIHTTLNARCSVIAAANPVFGQYDVNRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLRTHRyl 572
Cdd:NF040949 415 QTVSIAKAGIVATLNARASVLAAGNPKFGRYDPNRSVAENIDLPPTILSRFDLIFVIRDKPNEERDRRLARHILDVHS-- 492
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 573 ppgylEGEPVRErlnlslavgedaDINPEehsnsgagvenegeddedhvfekfnpllqagaklaknkgnyngteipklvt 652
Cdd:NF040949 493 -----GKEKVKP------------EIDPD--------------------------------------------------- 504
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 653 ipFLRKYVQYAKERVIPQLTQEAINVIVKNYTDLRNDDNTKKS-----PITARTLETLIRLATAHAKVRLSKTVNKVDAK 727
Cdd:NF040949 505 --LLKKYIAYARKYVRPKLTEEAKKLIEDFYVEMRKSSKSSEDpdspiPITARQLEALIRLSEAHAKMRLKDEVTAEDAE 582
|
650 660
....*....|....*....|
gi 1134776453 728 VAANLLRFALlgEDIGNDID 747
Cdd:NF040949 583 RAIRLMLAFL--ESVGIDVE 600
|
|
| MCM |
cd17706 |
MCM helicase family; MCM helicases are a family of helicases that play an important role in ... |
362-736 |
4.85e-154 |
|
MCM helicase family; MCM helicases are a family of helicases that play an important role in replication and homologous recombination repair. The heterohexameric ring-shaped Mcm2-7 complex is part of the replicative helicase that unwinds parental double-stranded DNA at a replication fork to provide single-stranded DNA templates for the replicative polymerases. Mcm8 and Mcm9, form a complex required for homologous recombination (HR) repair induced by DNA interstrand crosslinks (ICLs).
Pssm-ID: 350658 [Multi-domain] Cd Length: 311 Bit Score: 456.80 E-value: 4.85e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 362 ILSQSLAPSIYGHDHIKKAILLMLMGGVEKNLENGSHLRGDINILMVGDPSTAKSQLLRFVLNTASLAIATTGRGSSGVG 441
Cdd:cd17706 1 ILADSIAPSIYGHEDVKKAVLLQLFGGVQKILEDGTRIRGDIHILLVGDPGTAKSQILKYVLKIAPRGVYTSGKGSSGAG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 442 LTAAVTTDRETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEVMEQQTVTIAKAGIHTTLNARCSVIAAANPVFG 521
Cdd:cd17706 81 LTAAVVRDSETGEWYLEAGALVLADGGVCCIDEFDKMKELDRTALHEAMEQQTISIAKAGIVTTLNARCSILAAANPKGG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 522 QYDVNRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLRTHRYLPPGYlegepvrerlnlslavgedadinpe 601
Cdd:cd17706 161 RYNPKLSPIENINLPSPLLSRFDLIFVIRDDPDEERDEELAEHIIDLHRGSDPEE------------------------- 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 602 ehsnsgagvenegeddedhvfekfnpllqagaklaknkgNYNGTEIPKLVTIPFLRKYVQYAKeRVIPQLTQEAINVIVK 681
Cdd:cd17706 216 ---------------------------------------QVKPEEDGIPIDIELLRKYILYAR-QIHPKISEEAREKLVR 255
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1134776453 682 NYTDLRNDDNTKKS-PITARTLETLIRLATAHAKVRLSKTVNKVDAKVAANLLRFA 736
Cdd:cd17706 256 WYVELRKESERRSTiPITARQLESVIRLAEAHAKMRLSEVVTEEDVEEAIRLVRHS 311
|
|
| MCM |
pfam00493 |
MCM P-loop domain; |
346-569 |
4.55e-129 |
|
MCM P-loop domain;
Pssm-ID: 459830 [Multi-domain] Cd Length: 224 Bit Score: 388.81 E-value: 4.55e-129
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 346 DIRNINKLSKKKDIFDILSQSLAPSIYGHDHIKKAILLMLMGGVEKNLENGSHLRGDINILMVGDPSTAKSQLLRFVLNT 425
Cdd:pfam00493 1 DEEEIKELAKRPDIYDKLADSIAPSIYGHEDVKKAILLQLFGGVKKILPDGTRLRGDINVLLVGDPGTAKSQLLKYVEKI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 426 ASLAIATTGRGSSGVGLTAAVTTDRETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEVMEQQTVTIAKAGIHTT 505
Cdd:pfam00493 81 APRAVYTSGKGSSAAGLTAAVVRDPVTGEFVLEAGALVLADGGVCCIDEFDKMNDEDRVALHEAMEQQTISIAKAGIVAT 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1134776453 506 LNARCSVIAAANPVFGQYDVNRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLRTH 569
Cdd:pfam00493 161 LNARCSILAAANPIFGRYDPKKSIAENINLPPPLLSRFDLIFVLLDKPDEEKDERLAKHIVDLH 224
|
|
| MCM5 |
cd17756 |
DNA replication licensing factor Mcm5; Mcm5 is a helicase that play an important role in ... |
362-734 |
3.52e-119 |
|
DNA replication licensing factor Mcm5; Mcm5 is a helicase that play an important role in replication. It is part of the heterohexameric ring-shaped Mcm2-7 complex, which is part of the replicative helicase that unwinds parental double-stranded DNA at a replication fork to provide single-stranded DNA templates for the replicative polymerases.
Pssm-ID: 350662 [Multi-domain] Cd Length: 317 Bit Score: 366.71 E-value: 3.52e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 362 ILSQSLAPSIYGHDHIKKAILLMLMGGVEKNLENGSHLRGDINILMVGDPSTAKSQLLRFVLNTASLAIATTGRGSSGVG 441
Cdd:cd17756 1 IISKSIAPSIYGNEDIKKAIACLLFGGSRKRLPDGMRLRGDINVLLLGDPGTAKSQLLKFVEKVAPIGVYTSGKGSSAAG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 442 LTAAVTTDRETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEVMEQQTVTIAKAGIHTTLNARCSVIAAANPVFG 521
Cdd:cd17756 81 LTASVMRDPSTREFYLEGGAMVLADGGVVCIDEFDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRTSVLAAANPVFG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 522 QYDVNRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLRTHRylppgylegepvrerlnlslavgedadinpe 601
Cdd:cd17756 161 RYDDLKTPGDNIDFQTTILSRFDMIFIVKDKHDEERDITIAKHVINIHA------------------------------- 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 602 ehSNSGAGVENEGEDDedhvfekfnpllqagaklaknkgnyngteipklVTIPFLRKYVQYAKERVIPQLTQEAINVIVK 681
Cdd:cd17756 210 --SARKASQSQENEGE---------------------------------IPISKLKRYIAYCRAKCAPRLSEEAAEKLSN 254
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1134776453 682 NYTDLRND--------DNTKKSPITARTLETLIRLATAHAKVRLSKTVNKVDAKVAANLLR 734
Cdd:cd17756 255 HYVTIRKDvrqnelesDNRSSIPITVRQLEAIIRISESLAKMELSPIATEKHVEEAIRLFQ 315
|
|
| MCM6 |
cd17757 |
DNA replication licensing factor Mcm6; Mcm6 is a helicase that play an important role in ... |
362-734 |
4.58e-113 |
|
DNA replication licensing factor Mcm6; Mcm6 is a helicase that play an important role in replication. It is part of the heterohexameric ring-shaped Mcm2-7 complex, which is part of the replicative helicase that unwinds parental double-stranded DNA at a replication fork to provide single-stranded DNA templates for the replicative polymerases.
Pssm-ID: 350663 [Multi-domain] Cd Length: 307 Bit Score: 350.13 E-value: 4.58e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 362 ILSQSLAPSIYGHDHIKKAILLMLMGGVEKNLENGSHLRGDINILMVGDPSTAKSQLLRFVLNTASLAIATTGRGSSGVG 441
Cdd:cd17757 1 NLVRSIAPSIYGHEEVKKGILLMLLGGVHKITREGISLRGDINVCIVGDPSTAKSQFLKYVEEFSPRAVYTSGKASSAAG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 442 LTAAVTTDRETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEVMEQQTVTIAKAGIHTTLNARCSVIAAANPVFG 521
Cdd:cd17757 81 LTAAVVRDEETGDFVIEAGALMLADNGICCIDEFDKMDIKDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPVGG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 522 QYDVNRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLRTHRylppgylegepvrerlnlslavGEDADINPE 601
Cdd:cd17757 161 RYDRSKSLKQNINISAPIMSRFDLFFVLLDECNEVTDYAIASHIVDLHS----------------------KREEAIEPP 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 602 ehsnsgagvenegeddedhvfekfnpllqagaklaknkgnYNGTEIpklvtipflRKYVQYAKeRVIPQLTQEAINVIVK 681
Cdd:cd17757 219 ----------------------------------------FTAEQL---------KRYIAYAR-TFKPKLTKEAKDELVE 248
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 1134776453 682 NYTDLRNDD---NTKKS-PITARTLETLIRLATAHAKVRLSKTVNKVDAKVAANLLR 734
Cdd:cd17757 249 QYKELRQDDasgSTRSSyRITVRQLESLIRLSEAIARLHCSDEVTPEHVEEAARLLK 305
|
|
| MCM_arch |
cd17761 |
archaeal MCM protein; archaeal MCM proteins form a homohexameric ring homologous to the ... |
366-734 |
6.21e-113 |
|
archaeal MCM protein; archaeal MCM proteins form a homohexameric ring homologous to the eukaryotic Mcm2-7 helicase and also function as the replicative helicase at the replication fork
Pssm-ID: 350667 [Multi-domain] Cd Length: 308 Bit Score: 349.83 E-value: 6.21e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 366 SLAPSIYGHDHIKKAILLMLMGGVEKNLENGSHLRGDINILMVGDPSTAKSQLLRFVLNTASLAIATTGRGSSGVGLTAA 445
Cdd:cd17761 6 SIAPSIYGHEDVKEAIALQLFGGVPKVLPDGTRIRGDIHILLVGDPGTAKSQLLKYVSKVAPRAVYTTGKGSTAAGLTAA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 446 VTTDRETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEVMEQQTVTIAKAGIHTTLNARCSVIAAANPVFGQYDV 525
Cdd:cd17761 86 VVRDEGTGEWYLEAGALVLADKGIAVVDEIDKMRKEDRSALHEAMEQQTISIAKAGIVATLNARAAVLAAANPKFGRFDS 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 526 NRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLRTHRylppgylEGEPvrerlnlslavgedadinpeehsn 605
Cdd:cd17761 166 YRPVAEQIDLPPTLLSRFDLIFVLKDTPNEEKDRRLANHILDTHS-------GGEM------------------------ 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 606 sgagvenegeddedhvfekfnpllqagaklaknkgnyngTEIPKLVTIPFLRKYVQYAKERVIPQLTQEAINVIVKNYTD 685
Cdd:cd17761 215 ---------------------------------------REIKPEIDPDLLRKYIAYARKNVRPVLTEEAKQLIKDFYVE 255
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 1134776453 686 LRN--DDNTKKSPITARTLETLIRLATAHAKVRLSKTVNKVDAKVAANLLR 734
Cdd:cd17761 256 MRKsgQETPSPVPITARQLEALVRLSEASARMRLSQEVTLEDAERAIRIML 306
|
|
| MCM2 |
cd17753 |
DNA replication licensing factor Mcm2; Mcm2 is a helicase that play an important role in ... |
366-729 |
4.47e-109 |
|
DNA replication licensing factor Mcm2; Mcm2 is a helicase that play an important role in replication. It is part of the heterohexameric ring-shaped Mcm2-7 complex, which is part of the replicative helicase that unwinds parental double-stranded DNA at a replication fork to provide single-stranded DNA templates for the replicative polymerases.
Pssm-ID: 350659 [Multi-domain] Cd Length: 325 Bit Score: 340.58 E-value: 4.47e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 366 SLAPSIYGHDHIKKAILLMLMGGVEKNLENGSHLRGDINILMVGDPSTAKSQLLRFVLNTASLAIATTGRGSSGVGLTAA 445
Cdd:cd17753 5 SIAPSIYGHDDIKTAIALALFGGVAKNPGGKHRIRGDINVLLLGDPGTAKSQFLKYVEKTAHRAVFTTGQGASAVGLTAS 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 446 VTTDRETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEVMEQQTVTIAKAGIHTTLNARCSVIAAANPVFGQYDV 525
Cdd:cd17753 85 VRKDPVTKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCSVIAAANPIGGRYNP 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 526 NRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLRTHRylppgylEGEPvrerlnlslavgeDADINPEEhsn 605
Cdd:cd17753 165 TLTFAQNVNLTEPILSRFDILCVVRDTVDPEEDERLAKFVVGSHV-------RSHP-------------ENDEDREG--- 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 606 sgagvENEGEDDEDHVFEKFNPLLQAgaklaknkgnyngteipklvtipFLRKYVQYAKERVIPQLTQEAINVIVKNYTD 685
Cdd:cd17753 222 -----EEEKNQRQRPKETKVEPIPQE-----------------------LLRKYIHYAREKVRPKLNQMDMDKVSRVYAD 273
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 1134776453 686 LRND-DNTKKSPITARTLETLIRLATAHAKVRLSKTVNKVDAKVA 729
Cdd:cd17753 274 LRKEsMATGSLPITVRHLESIIRISEAHAKMHLREYVSEEDVDMA 318
|
|
| MCM7 |
cd17758 |
DNA replication licensing factor Mcm7; Mcm7 is a helicase that play an important role in ... |
363-736 |
5.27e-109 |
|
DNA replication licensing factor Mcm7; Mcm7 is a helicase that play an important role in replication. It is part of the heterohexameric ring-shaped Mcm2-7 complex, which is part of the replicative helicase that unwinds parental double-stranded DNA at a replication fork to provide single-stranded DNA templates for the replicative polymerases.
Pssm-ID: 350664 [Multi-domain] Cd Length: 306 Bit Score: 339.39 E-value: 5.27e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 363 LSQSLAPSIYGHDHIKKAILLMLMGGVEKNlENGSHLRGDINILMVGDPSTAKSQLLRFVLNTASLAIATTGRGSSGVGL 442
Cdd:cd17758 2 LAASIAPEIYGHEDVKKALLLLLVGGVDKR-GDGMKIRGDINICLMGDPGVAKSQLLKYICRIAPRSVYTTGRGSSGVGL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 443 TAAVTTDRETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEVMEQQTVTIAKAGIHTTLNARCSVIAAANPVFGQ 522
Cdd:cd17758 81 TAAVMKDPVTGEMTLEGGALVLADQGICCIDEFDKMDESDRTAIHEVMEQQTISIAKAGITTTLNARTSILAAANPAYGR 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 523 YDVNRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLRTHRYlppgylegepvrerlnlslavgedadinpee 602
Cdd:cd17758 161 YNPRRSPEQNINLPAALLSRFDLLFLILDKPDRDNDLRLAEHVTYVHQH------------------------------- 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 603 hsnsgagvenegEDDEDHVFEKFNPllqagaklaknkgnyngteipklvtiPFLRKYVQYAKeRVIPQLTQEAINVIVKN 682
Cdd:cd17758 210 ------------NKQPDSDFEPLDP--------------------------KLLRAYIALAK-RKRPTVPPALADYIVQA 250
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 1134776453 683 YTDLRNDDNTKKSP--ITARTLETLIRLATAHAKVRLSKTVNKVDAKVAANLLRFA 736
Cdd:cd17758 251 YVEMRQEAKRSKDFtfTTPRTLLAILRLSQALARLRLSDSVEIDDVEEALRLMEMS 306
|
|
| MCM4 |
cd17755 |
DNA replication licensing factor Mcm4; Mcm4 is a helicase that play an important role in ... |
362-736 |
5.81e-108 |
|
DNA replication licensing factor Mcm4; Mcm4 is a helicase that play an important role in replication. It is part of the heterohexameric ring-shaped Mcm2-7 complex, which is part of the replicative helicase that unwinds parental double-stranded DNA at a replication fork to provide single-stranded DNA templates for the replicative polymerases.
Pssm-ID: 350661 [Multi-domain] Cd Length: 309 Bit Score: 337.10 E-value: 5.81e-108
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 362 ILSQSLAPSIYGHDHIKKAILLMLMGGVEKNLEN-GSHLRGDINILMVGDPSTAKSQLLRFVLNTASLAIATTGRGSSGV 440
Cdd:cd17755 1 RLARSIAPSIYELEDVKKGILLQLFGGTRKDFTKtGGKYRGDINILLCGDPGTSKSQLLQYVHKISPRGVYTSGKGSSAV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 441 GLTAAVTTDRETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEVMEQQTVTIAKAGIHTTLNARCSVIAAANPVF 520
Cdd:cd17755 81 GLTAYVTRDPDTKQLVLESGALVLSDGGICCIDEFDKMSDSTRSVLHEVMEQQTLSIAKAGIITTLNARTSILASANPIG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 521 GQYDVNRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLRTHrylppgylegepvrerlnlslavgedadinp 600
Cdd:cd17755 161 SRYNPKLTVVENIDLPPTLLSRFDLIYLVLDKVDEKYDRRLAKHLVSLY------------------------------- 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 601 eehsnsgagVENEGEDDEDHVFEkfnpllqagaklaknkgnyngteipklvtIPFLRKYVQYAKERVIPQLTQEAINVIV 680
Cdd:cd17755 210 ---------LEDTPEHIQDEVLD-----------------------------VEVLTDYISYAREHIHPKLSEEAAQELV 251
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1134776453 681 KNYTDLRNDDNTKKSPITA--RTLETLIRLATAHAKVRLSKTVNKVDAKVAANLLRFA 736
Cdd:cd17755 252 QAYVDMRKMGSDARKRITAtpRQLESLIRLAEAHAKMRLSNVVEAEDVEEAVRLIREA 309
|
|
| PTZ00111 |
PTZ00111 |
DNA replication licensing factor MCM4; Provisional |
286-736 |
1.21e-69 |
|
DNA replication licensing factor MCM4; Provisional
Pssm-ID: 173403 [Multi-domain] Cd Length: 915 Bit Score: 249.91 E-value: 1.21e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 286 TKPGDRVNVVGVFKS----------------------LGAGGMNQSNSNTLI-GFKTLilGNtvyplharstgvaaRQML 342
Cdd:PTZ00111 360 VKTGDRVTVVGILKVtpirtsttrrtlkslytyfvnvIHVKVINSTNANQPEkGLKYL--GN--------------ENDF 423
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 343 TDFDIRNINKLSKKKDIFDILSQSLAPSIYGHDHIKKAILLMLMGGVEKNLENG---------SHLRGDINILMVGDPST 413
Cdd:PTZ00111 424 SDLQVYKILELSRNPMIYRILLDSFAPSIKARNNVKIGLLCQLFSGNKNSSDFNkspdacykvDNFRGIINVLLCGDPGT 503
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 414 AKSQLLRFVLNTASLAIATTGRGSSGVGLTAAVT-TDRETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEVMEQ 492
Cdd:PTZ00111 504 AKSQLLHYTHLLSPRSIYTSGKSSSSVGLTASIKfNESDNGRAMIQPGAVVLANGGVCCIDELDKCHNESRLSLYEVMEQ 583
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 493 QTVTIAKAGIHTTLNARCSVIAAANPVFGQYDVNRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLRThrYL 572
Cdd:PTZ00111 584 QTVTIAKAGIVATLKAETAILASCNPINSRYNKNKAVIENINISPSLFTRFDLIYLVLDHIDQDTDQLISLSIAKD--FL 661
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 573 PPgylegepvrerlnlslavgedadinpeehSNSGAGvenegeDDEDhVFEKFNPLLQAGAKLAKNKgNYNGTEipklvt 652
Cdd:PTZ00111 662 LP-----------------------------HMTGSG------NDED-TYDRSNTMHVEDESLRSEK-DYNKND------ 698
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 653 IPFLRKYVQYAKERVIPQLTQEAINVIVKNYTDLR------------------NDDN-------TKKSPITARTLETLIR 707
Cdd:PTZ00111 699 LDMLRMYIKFSKLHCFPKLSDEAKKVITREYVKMRqgnfqtsnldelehaqedDDDDlyyqssgTRMIYVSSRMISSIIR 778
|
490 500
....*....|....*....|....*....
gi 1134776453 708 LATAHAKVRLSKTVNKVDAKVAANLLRFA 736
Cdd:PTZ00111 779 ISVSLARMRLSTVVTPADALQAVQIVKSS 807
|
|
| MCM8 |
cd17759 |
DNA helicase Mcm8; Mcm8 plays an important role homologous recombination repair. It forms a ... |
362-727 |
3.39e-68 |
|
DNA helicase Mcm8; Mcm8 plays an important role homologous recombination repair. It forms a complex with Mcm9 that is required for homologous recombination (HR) repair induced by DNA interstrand crosslinks (ICLs).
Pssm-ID: 350665 [Multi-domain] Cd Length: 289 Bit Score: 229.34 E-value: 3.39e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 362 ILSQSLAPSIYGHDHIKKAILLMLMGGVEK--NLENGSHLRGDINILMVGDPSTAKSQLLRFVLNTASLAIATTGRGSSG 439
Cdd:cd17759 1 LIVNSLCPAIYGHELVKAGLLLSLFGGKQKyaDDKNRIPIRGDPHVLIVGDPGLGKSQMLQAACNIAPRGVYVCGNTTTT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 440 VGLTAAVTTDRETGERRLEAGAMVLADRGVVCIDEFDKMTDvDRVAIHEVMEQQTVTIAKAGIHTTLNARCSVIAAANPV 519
Cdd:cd17759 81 SGLTVTLTKDGRSGDFALEAGALVLGDQGICGIDEFDKMGS-QHQALLEAMEQQSVSLAKAGVVCSLPARTSVIAAANPV 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 520 FGQYDVNRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHvlrthrylppgylegepvrerlnlslavgedadin 599
Cdd:cd17759 160 GGHYNKGKTVSENLKMGPALLSRFDLVFILLDTPSEEHDHLLSEH----------------------------------- 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 600 peehsnsgagvenegeddedhvfekfnpllqagaklaknkgnyngteiPKLvtipfLRKYVQYAKERVIPQLTQEAINVI 679
Cdd:cd17759 205 ------------------------------------------------HQL-----LRKYISYARQYVNPVLSKDASEAL 231
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1134776453 680 VKNYTDLRNDDNTKKS-PITARTLETLIRLATAHAKVRLSKTVNKVDAK 727
Cdd:cd17759 232 QEFYLELRKQNQLADSsPITTRQLESLIRLTEARARLELREEATKEDAE 280
|
|
| MCM9 |
cd17760 |
DNA helicase Mcm9; Mcm9 plays an important role homologous recombination repair. It forms a ... |
366-733 |
3.66e-68 |
|
DNA helicase Mcm9; Mcm9 plays an important role homologous recombination repair. It forms a complex with Mcm8 that is required for homologous recombination (HR) repair induced by DNA interstrand crosslinks (ICLs).
Pssm-ID: 350666 [Multi-domain] Cd Length: 299 Bit Score: 229.74 E-value: 3.66e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 366 SLAPSIYGHDHIKKAILLMLMGGVEKNLENGSHLRGDINILMVGDPSTAKSQLLRFVLNTASLAIATTGRGSSGVGLTaa 445
Cdd:cd17760 5 SLCPQVFGLYNVKLAVAMVLAGGVQRIDASGTRVRGESHLLLVGDPGTGKSQFLKYAAKITPRSVLTAGIGSTSAGLT-- 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 446 VTTDRETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEVMEQQTVTIAKAGIHTTLNARCSVIAAANPVfGQYDV 525
Cdd:cd17760 83 VTAVKDGGEWNLEAGALVLADGGLCCIDEFNSLKEHDRTSIHEAMEQQTISVAKAGLVCKLNTRTTILAATNPK-GQYDP 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 526 NRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLrthrylppgylegepvrerlnlslavgedadinpeehsn 605
Cdd:cd17760 162 NESISVNIALASPLLSRFDLVLVLLDTKNEDWDRIISSFIL--------------------------------------- 202
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 606 sgagvENEGEDDEDHvfekfnpllqagaklaknkgnyngteipKLVTIPFLRKYVQYAKERViPQLTQEAINVIVKNYTD 685
Cdd:cd17760 203 -----ENKGEPSKSS----------------------------KLWSMEKMRTYFCLIKNLR-PVLSDEANAILLRYYQL 248
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1134776453 686 LRNDDNTKKSPITARTLETLIRLATAHAKVRLSKTVNKVDAKVAANLL 733
Cdd:cd17760 249 QRQSDCRNAARTTIRMLESLIRLAEAHARLMFRETVTEEDAITVVSVM 296
|
|
| MCM_OB |
pfam17207 |
MCM OB domain; This family contains an OB-fold found within MCM proteins. This domain contains ... |
169-301 |
3.04e-32 |
|
MCM OB domain; This family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif.
Pssm-ID: 465381 [Multi-domain] Cd Length: 126 Bit Score: 121.82 E-value: 3.04e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 169 RTLTAQHLNKLVSVEGIVTKTSLVRPKLIRSVHYAAKTGRFHYRDYtdatttlttRIPTPAIYPT-EDTEGNKLTTEYgy 247
Cdd:pfam17207 3 RDLRSEHIGKLVSVSGIVTRTSEVRPKLKKATFTCRKCGHTVGVKI---------TEPTKCPNPEcGNKDPFKLVHEK-- 71
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1134776453 248 STFIDHQRITVQEMPEMAPAGQLPRSIDVILDDDLVDKTKPGDRVNVVGVFKSL 301
Cdd:pfam17207 72 SKFVDFQKIKIQESPEEVPAGELPRSLDVILDDDLVDRVKPGDRVTVTGIYRVV 125
|
|
| MCM_lid |
pfam17855 |
MCM AAA-lid domain; This entry represents the AAA-lid domain found in MCM proteins. |
655-737 |
2.23e-26 |
|
MCM AAA-lid domain; This entry represents the AAA-lid domain found in MCM proteins.
Pssm-ID: 465534 [Multi-domain] Cd Length: 86 Bit Score: 103.39 E-value: 2.23e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 655 FLRKYVQYAKERVIPQLTQEAINVIVKNYTDLRNDDNTKKS--PITARTLETLIRLATAHAKVRLSKTVNKVDAKVAANL 732
Cdd:pfam17855 2 LLRKYIAYAREKIKPKLSEEAREKLVDAYVELRKESTGSGSsiPITVRQLESLIRLSEAHAKMRLSEIVTEEDVEEAIRL 81
|
....*
gi 1134776453 733 LRFAL 737
Cdd:pfam17855 82 LKESL 86
|
|
| MCM_N |
pfam14551 |
MCM N-terminal domain; This family contains the N-terminal domain of MCM proteins. |
25-143 |
9.92e-06 |
|
MCM N-terminal domain; This family contains the N-terminal domain of MCM proteins.
Pssm-ID: 464206 [Multi-domain] Cd Length: 95 Bit Score: 44.98 E-value: 9.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 25 VRRFQEFLDTFTS-------YRDSVRSIqvynsnnaanynddqddaderdllgdddgddLEKEKkaasstslnilpHRII 97
Cdd:pfam14551 1 KRKFKDFLEEFREdgdgefkYRDQLREM-------------------------------IEREQ------------RSLE 37
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 1134776453 98 ISLDDLREFDRSFWSGILVEPAYFIPPAEKALTDLADSMDDVPHPN 143
Cdd:pfam14551 38 VDLDDLREFDPDLAEALLENPYEYLPLFEEALKEVVKELSEDPDYA 83
|
|
| AAA_5 |
pfam07728 |
AAA domain (dynein-related subfamily); This Pfam entry includes some of the AAA proteins not ... |
404-543 |
2.01e-04 |
|
AAA domain (dynein-related subfamily); This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.
Pssm-ID: 400191 [Multi-domain] Cd Length: 135 Bit Score: 42.28 E-value: 2.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 404 NILMVGDPSTAKSQLLRfvlntaSLAIATTGRGSSGVGLTAAVTTDRETGERRLEAGAMVLADR---------GVVCIDE 474
Cdd:pfam07728 1 GVLLVGPPGTGKTELAE------RLAAALSNRPVFYVQLTRDTTEEDLFGRRNIDPGGASWVDGplvraaregEIAVLDE 74
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1134776453 475 FDKMTDVDRVAIHEVMEQQTVTIAKAG--IHTTLNARcSVIAAANPVfgQYDVNRdphqniaLPDSLLSRF 543
Cdd:pfam07728 75 INRANPDVLNSLLSLLDERRLLLPDGGelVKAAPDGF-RLIATMNPL--DRGLNE-------LSPALRSRF 135
|
|
| Mg_chelatase |
pfam01078 |
Magnesium chelatase, subunit ChlI; Magnesium-chelatase is a three-component enzyme that ... |
371-518 |
3.02e-04 |
|
Magnesium chelatase, subunit ChlI; Magnesium-chelatase is a three-component enzyme that catalyzes the insertion of Mg2+ into protoporphyrin IX. This is the first unique step in the synthesis of (bacterio)chlorophyll. Due to this, it is thought that Mg-chelatase has an important role in channelling inter- mediates into the (bacterio)chlorophyll branch in response to conditions suitable for photosynthetic growth. ChlI and BchD have molecular weight between 38-42 kDa.
Pssm-ID: 426032 [Multi-domain] Cd Length: 207 Bit Score: 42.91 E-value: 3.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 371 IYGHDHIKKAILLMLMGGveknlengsHlrgdiNILMVGDPSTAKSQL---LRFVL----------NTASLAIATTGRG- 436
Cdd:pfam01078 5 VKGQEQAKRALEIAAAGG---------H-----NLLMIGPPGSGKTMLakrLPGILpplteaealeVTAIHSVAGLGGDg 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 437 --------------SSGVGLTAavttdretGERRLEAGAMVLADRGVVCIDE---FDKMT-DVDRvaihEVMEQQTVTIA 498
Cdd:pfam01078 71 glirrrpfraphhsASAAALVG--------GGSIPRPGEISLAHNGVLFLDElpeFKRRVlESLR----QPLEDGEITIS 138
|
170 180
....*....|....*....|
gi 1134776453 499 KAGIHTTLNARCSVIAAANP 518
Cdd:pfam01078 139 RARAKVTFPARFQLVAAMNP 158
|
|
| MoxR |
COG0714 |
MoxR-like ATPase [General function prediction only]; MoxR-like ATPase is part of the Pathway ... |
371-548 |
1.73e-03 |
|
MoxR-like ATPase [General function prediction only]; MoxR-like ATPase is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 440478 [Multi-domain] Cd Length: 292 Bit Score: 41.31 E-value: 1.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 371 IYGHDHIKKAILL-MLMGGveknlengsHLrgdiniLMVGDPSTAKSQLLRfvlntaSLAiATTGRGSSGV----GLTAA 445
Cdd:COG0714 14 YVGQEELIELVLIaLLAGG---------HL------LLEGVPGVGKTTLAK------ALA-RALGLPFIRIqftpDLLPS 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 446 -VT----TDRETGERRLEAGAmVLAdrGVVCIDEFDKMTDvdRV--AIHEVMEQQTVTIakAGIHTTLNARCSVIAAANP 518
Cdd:COG0714 72 dILgtyiYDQQTGEFEFRPGP-LFA--NVLLADEINRAPP--KTqsALLEAMEERQVTI--PGGTYKLPEPFLVIATQNP 144
|
170 180 190
....*....|....*....|....*....|..
gi 1134776453 519 V--FGQYDvnrdphqniaLPDSLLSRFdLLFV 548
Cdd:COG0714 145 IeqEGTYP----------LPEAQLDRF-LLKL 165
|
|
| AAA |
cd00009 |
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily ... |
404-549 |
5.78e-03 |
|
The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Pssm-ID: 99707 [Multi-domain] Cd Length: 151 Bit Score: 38.28 E-value: 5.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1134776453 404 NILMVGDPSTAKSQLLRFVLNTASLaiattgRGSSGVGLTAAVTT-------DRETGERRLEAGAMVLADRGVVCIDEFD 476
Cdd:cd00009 21 NLLLYGPPGTGKTTLARAIANELFR------PGAPFLYLNASDLLeglvvaeLFGHFLVRLLFELAEKAKPGVLFIDEID 94
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1134776453 477 KMTDVDRVAIHEVMEQQTVTIAKagihttlNARCSVIAAANPVFgqydvnrdphqNIALPDSLLSRFDLLFVV 549
Cdd:cd00009 95 SLSRGAQNALLRVLETLNDLRID-------RENVRVIGATNRPL-----------LGDLDRALYDRLDIRIVI 149
|
|
| |
