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Conserved domains on  [gi|116180760|ref|XP_001220229|]
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uncharacterized protein CHGG_01008 [Chaetomium globosum CBS 148.51]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Peptidases_S8_7 cd07491
Peptidase S8 family domain, uncharacterized subfamily 7; This family is a member of the ...
692-941 5.40e-100

Peptidase S8 family domain, uncharacterized subfamily 7; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


:

Pssm-ID: 173816  Cd Length: 247  Bit Score: 314.27  E-value: 5.40e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  692 LNPVTVALIDDGADITHPELNGKKFRGKSLHEYVDGsGWRVSPYWHSASGHGTLMARLIHRICPSAIIYIIKLQTWIPVG 771
Cdd:cd07491     2 LKRIKVALIDDGVDILDSDLQGKIIGGKSFSPYEGD-GNKVSPYYVSADGHGTAMARMICRICPSAKLYVIKLEDRPSPD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  772 SNKLQIQPQSAIQAIEHAIEQGVQIISMSWTMKPPES-----APVRNAFDTAIHRakGILLFCSASDQGKFQDFTYPHAS 846
Cdd:cd07491    81 SNKRSITPQSAAKAIEAAVEKKVDIISMSWTIKKPEDndndiNELENAIKEALDR--GILLFCSASDQGAFTGDTYPPPA 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  847 NPNGSFRIGAAKNTGSMADFVGDAHELNFILPGHNVVVNDRAYadvkdkDFQEFASHTGSSVATALAAGLAALVMECVRL 926
Cdd:cd07491   159 ARDRIFRIGAADEDGGADAPVGDEDRVDYILPGENVEARDRPP------LSNSFVTHTGSSVATALAAGLAALILYCVRL 232
                         250
                  ....*....|....*
gi 116180760  927 GVFYTEEMKLWEPSL 941
Cdd:cd07491   233 RAIGAEEENESDGSA 247
Ank_2 super family cl48147
Ankyrin repeats (3 copies);
162-240 1.42e-03

Ankyrin repeats (3 copies);


The actual alignment was detected with superfamily member pfam12796:

Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 38.94  E-value: 1.42e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760   162 EYLKAECVEHD--NDREITCLHVAISANFKPELTAIIisfvpEEMFSVVDFKGRTPLHLAVEFDkccktQISIVTQLLHR 239
Cdd:pfam12796   14 KLLLENGADANlqDKNGRTALHLAAKNGHLEIVKLLL-----EHADVNLKDNGRTALHYAARSG-----HLEIVKLLLEK 83

                   .
gi 116180760   240 G 240
Cdd:pfam12796   84 G 84
 
Name Accession Description Interval E-value
Peptidases_S8_7 cd07491
Peptidase S8 family domain, uncharacterized subfamily 7; This family is a member of the ...
692-941 5.40e-100

Peptidase S8 family domain, uncharacterized subfamily 7; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173816  Cd Length: 247  Bit Score: 314.27  E-value: 5.40e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  692 LNPVTVALIDDGADITHPELNGKKFRGKSLHEYVDGsGWRVSPYWHSASGHGTLMARLIHRICPSAIIYIIKLQTWIPVG 771
Cdd:cd07491     2 LKRIKVALIDDGVDILDSDLQGKIIGGKSFSPYEGD-GNKVSPYYVSADGHGTAMARMICRICPSAKLYVIKLEDRPSPD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  772 SNKLQIQPQSAIQAIEHAIEQGVQIISMSWTMKPPES-----APVRNAFDTAIHRakGILLFCSASDQGKFQDFTYPHAS 846
Cdd:cd07491    81 SNKRSITPQSAAKAIEAAVEKKVDIISMSWTIKKPEDndndiNELENAIKEALDR--GILLFCSASDQGAFTGDTYPPPA 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  847 NPNGSFRIGAAKNTGSMADFVGDAHELNFILPGHNVVVNDRAYadvkdkDFQEFASHTGSSVATALAAGLAALVMECVRL 926
Cdd:cd07491   159 ARDRIFRIGAADEDGGADAPVGDEDRVDYILPGENVEARDRPP------LSNSFVTHTGSSVATALAAGLAALILYCVRL 232
                         250
                  ....*....|....*
gi 116180760  927 GVFYTEEMKLWEPSL 941
Cdd:cd07491   233 RAIGAEEENESDGSA 247
AprE COG1404
Serine protease, subtilisin family [Posttranslational modification, protein turnover, ...
695-866 3.45e-19

Serine protease, subtilisin family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441014 [Multi-domain]  Cd Length: 456  Bit Score: 91.70  E-value: 3.45e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  695 VTVALIDDGADITHPELNGKKFRGKSlheYVDGSGwrvspYWHSASGHGTLMARLI----------HRICPSAIIYIIKl 764
Cdd:COG1404   111 VTVAVIDTGVDADHPDLAGRVVGGYD---FVDGDG-----DPSDDNGHGTHVAGIIaangnngggvAGVAPGAKLLPVR- 181
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  765 qtwipVGSNKLQIQPQSAIQAIEHAIEQGVQIISMSWTMKPPE-SAPVRNAFDTAihRAKGILLFCSASDQGKFQDFTYP 843
Cdd:COG1404   182 -----VLDDNGSGTTSDIAAAIDWAADNGADVINLSLGGPADGySDALAAAVDYA--VDKGVLVVAAAGNSGSDDATVSY 254
                         170       180
                  ....*....|....*....|...
gi 116180760  844 HASNPNgSFRIGAAKNTGSMADF 866
Cdd:COG1404   255 PAAYPN-VIAVGAVDANGQLASF 276
Peptidase_S8 pfam00082
Subtilase family; Subtilases are a family of serine proteases. They appear to have ...
695-914 1.14e-11

Subtilase family; Subtilases are a family of serine proteases. They appear to have independently and convergently evolved an Asp/Ser/His catalytic triad, like that found in the trypsin serine proteases (see pfam00089). Structure is an alpha/beta fold containing a 7-stranded parallel beta sheet, order 2314567.


Pssm-ID: 395035 [Multi-domain]  Cd Length: 287  Bit Score: 66.71  E-value: 1.14e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760   695 VTVALIDDGADITHPELNGK-----KFRGKSLHEYVDGSGWRVSPYWhSASGHGTLMARLI----------HRICPSAII 759
Cdd:pfam00082    4 VVVAVLDTGIDPNHPDLSGNldndpSDDPEASVDFNNEWDDPRDDID-DKNGHGTHVAGIIaaggnnsigvSGVAPGAKI 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760   760 YIIKLQtwipvGSNKLQiqPQSAIQAIEHAIEQGVQIISMSWTMKPPESAPvrNAFDTAIHR-----AKGILLFCSA-SD 833
Cdd:pfam00082   83 LGVRVF-----GDGGGT--DAITAQAISWAIPQGADVINMSWGSDKTDGGP--GSWSAAVDQlggaeAAGSLFVWAAgNG 153
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760   834 QGKFQDFTYPHA-SNPNGSFRIGAA--KNTGSMADF------VGDAHELNFILPGHNVV---VNDRAYADVKDKDFQEFA 901
Cdd:pfam00082  154 SPGGNNGSSVGYpAQYKNVIAVGAVdeASEGNLASFssygptLDGRLKPDIVAPGGNITggnISSTLLTTTSDPPNQGYD 233
                          250
                   ....*....|...
gi 116180760   902 SHTGSSVATALAA 914
Cdd:pfam00082  234 SMSGTSMATPHVA 246
Ank_2 pfam12796
Ankyrin repeats (3 copies);
162-240 1.42e-03

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 38.94  E-value: 1.42e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760   162 EYLKAECVEHD--NDREITCLHVAISANFKPELTAIIisfvpEEMFSVVDFKGRTPLHLAVEFDkccktQISIVTQLLHR 239
Cdd:pfam12796   14 KLLLENGADANlqDKNGRTALHLAAKNGHLEIVKLLL-----EHADVNLKDNGRTALHYAARSG-----HLEIVKLLLEK 83

                   .
gi 116180760   240 G 240
Cdd:pfam12796   84 G 84
 
Name Accession Description Interval E-value
Peptidases_S8_7 cd07491
Peptidase S8 family domain, uncharacterized subfamily 7; This family is a member of the ...
692-941 5.40e-100

Peptidase S8 family domain, uncharacterized subfamily 7; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173816  Cd Length: 247  Bit Score: 314.27  E-value: 5.40e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  692 LNPVTVALIDDGADITHPELNGKKFRGKSLHEYVDGsGWRVSPYWHSASGHGTLMARLIHRICPSAIIYIIKLQTWIPVG 771
Cdd:cd07491     2 LKRIKVALIDDGVDILDSDLQGKIIGGKSFSPYEGD-GNKVSPYYVSADGHGTAMARMICRICPSAKLYVIKLEDRPSPD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  772 SNKLQIQPQSAIQAIEHAIEQGVQIISMSWTMKPPES-----APVRNAFDTAIHRakGILLFCSASDQGKFQDFTYPHAS 846
Cdd:cd07491    81 SNKRSITPQSAAKAIEAAVEKKVDIISMSWTIKKPEDndndiNELENAIKEALDR--GILLFCSASDQGAFTGDTYPPPA 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  847 NPNGSFRIGAAKNTGSMADFVGDAHELNFILPGHNVVVNDRAYadvkdkDFQEFASHTGSSVATALAAGLAALVMECVRL 926
Cdd:cd07491   159 ARDRIFRIGAADEDGGADAPVGDEDRVDYILPGENVEARDRPP------LSNSFVTHTGSSVATALAAGLAALILYCVRL 232
                         250
                  ....*....|....*
gi 116180760  927 GVFYTEEMKLWEPSL 941
Cdd:cd07491   233 RAIGAEEENESDGSA 247
Peptidases_S8_S53 cd00306
Peptidase domain in the S8 and S53 families; Members of the peptidases S8 (subtilisin and ...
695-908 8.59e-21

Peptidase domain in the S8 and S53 families; Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) family include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173787 [Multi-domain]  Cd Length: 241  Bit Score: 92.65  E-value: 8.59e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  695 VTVALIDDGADITHPELNGkkFRGKSLHEYVDGSGWRVSPYWHSASGHGTLMARLI---------HRICPSAIIYIIKlq 765
Cdd:cd00306     1 VTVAVIDTGVDPDHPDLDG--LFGGGDGGNDDDDNENGPTDPDDGNGHGTHVAGIIaasanngggVGVAPGAKLIPVK-- 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  766 twipVGSNKLQIQPQSAIQAIEHAI-EQGVQIISMSWTMK-PPESAPVRNAFDTAIhRAKGILLFCSASDQGKFQDFTYP 843
Cdd:cd00306    77 ----VLDGDGSGSSSDIAAAIDYAAaDQGADVINLSLGGPgSPPSSALSEAIDYAL-AKLGVLVVAAAGNDGPDGGTNIG 151
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 116180760  844 HASNPNGSFRIGAAKNTGSMA-DFVGDAHELNFILPGHNVVVNDRAYADvkdkdfqEFASHTGSSV 908
Cdd:cd00306   152 YPAASPNVIAVGAVDRDGTPAsPSSNGGAGVDIAAPGGDILSSPTTGGG-------GYATLSGTSM 210
AprE COG1404
Serine protease, subtilisin family [Posttranslational modification, protein turnover, ...
695-866 3.45e-19

Serine protease, subtilisin family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 441014 [Multi-domain]  Cd Length: 456  Bit Score: 91.70  E-value: 3.45e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  695 VTVALIDDGADITHPELNGKKFRGKSlheYVDGSGwrvspYWHSASGHGTLMARLI----------HRICPSAIIYIIKl 764
Cdd:COG1404   111 VTVAVIDTGVDADHPDLAGRVVGGYD---FVDGDG-----DPSDDNGHGTHVAGIIaangnngggvAGVAPGAKLLPVR- 181
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  765 qtwipVGSNKLQIQPQSAIQAIEHAIEQGVQIISMSWTMKPPE-SAPVRNAFDTAihRAKGILLFCSASDQGKFQDFTYP 843
Cdd:COG1404   182 -----VLDDNGSGTTSDIAAAIDWAADNGADVINLSLGGPADGySDALAAAVDYA--VDKGVLVVAAAGNSGSDDATVSY 254
                         170       180
                  ....*....|....*....|...
gi 116180760  844 HASNPNgSFRIGAAKNTGSMADF 866
Cdd:COG1404   255 PAAYPN-VIAVGAVDANGQLASF 276
Peptidases_S8_Subtilisin_subset cd07477
Peptidase S8 family domain in Subtilisin proteins; This group is composed of many different ...
694-882 2.81e-16

Peptidase S8 family domain in Subtilisin proteins; This group is composed of many different subtilisins: Pro-TK-subtilisin, subtilisin Carlsberg, serine protease Pb92 subtilisin, and BPN subtilisins just to name a few. Pro-TK-subtilisin is a serine protease from the hyperthermophilic archaeon Thermococcus kodakaraensis and consists of a signal peptide, a propeptide, and a mature domain. TK-subtilisin is matured from pro-TK-subtilisin upon autoprocessing and degradation of the propeptide. Unlike other subtilisins though, the folding of the unprocessed form of pro-TK-subtilisin is induced by Ca2+ binding which is almost completed prior to autoprocessing. Ca2+ is required for activity unlike the bacterial subtilisins. The propeptide is not required for folding of the mature domain unlike the bacterial subtilases because of the stability produced from Ca2+ binding. Subtilisin Carlsberg is extremely similar in structure to subtilisin BPN'/Novo thought it has a 30% difference in amino acid sequence. The substrate binding regions are also similar and 2 possible Ca2+ binding sites have been identified recently. Subtilisin Carlsberg possesses the highest commercial importance as a proteolytic additive for detergents. Serine protease Pb92, the serine protease from the alkalophilic Bacillus strain PB92, also contains two calcium ions and the overall folding of the polypeptide chain closely resembles that of the subtilisins. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173803 [Multi-domain]  Cd Length: 229  Bit Score: 79.11  E-value: 2.81e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  694 PVTVALIDDGADITHPELNGKKFRGKSlheYVDGSGWrvSPYWHSasGHGTLMA---------RLIHRICPSAIIYIIKl 764
Cdd:cd07477     1 GVKVAVIDTGIDSSHPDLKLNIVGGAN---FTGDDNN--DYQDGN--GHGTHVAgiiaaldngVGVVGVAPEADLYAVK- 72
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  765 qtwipVGSNKLQIQPQSAIQAIEHAIEQGVQIISMSWTMkPPESAPVRNAFDTAihRAKGILLFCSASDQGKFQ-DFTYP 843
Cdd:cd07477    73 -----VLNDDGSGTYSDIIAGIEWAIENGMDIINMSLGG-PSDSPALREAIKKA--YAAGILVVAAAGNSGNGDsSYDYP 144
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 116180760  844 hASNPnGSFRIGAAKNTGSMADF--VGDahELNFILPGHNV 882
Cdd:cd07477   145 -AKYP-SVIAVGAVDSNNNRASFssTGP--EVELAAPGVDI 181
Peptidase_S8 pfam00082
Subtilase family; Subtilases are a family of serine proteases. They appear to have ...
695-914 1.14e-11

Subtilase family; Subtilases are a family of serine proteases. They appear to have independently and convergently evolved an Asp/Ser/His catalytic triad, like that found in the trypsin serine proteases (see pfam00089). Structure is an alpha/beta fold containing a 7-stranded parallel beta sheet, order 2314567.


Pssm-ID: 395035 [Multi-domain]  Cd Length: 287  Bit Score: 66.71  E-value: 1.14e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760   695 VTVALIDDGADITHPELNGK-----KFRGKSLHEYVDGSGWRVSPYWhSASGHGTLMARLI----------HRICPSAII 759
Cdd:pfam00082    4 VVVAVLDTGIDPNHPDLSGNldndpSDDPEASVDFNNEWDDPRDDID-DKNGHGTHVAGIIaaggnnsigvSGVAPGAKI 82
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760   760 YIIKLQtwipvGSNKLQiqPQSAIQAIEHAIEQGVQIISMSWTMKPPESAPvrNAFDTAIHR-----AKGILLFCSA-SD 833
Cdd:pfam00082   83 LGVRVF-----GDGGGT--DAITAQAISWAIPQGADVINMSWGSDKTDGGP--GSWSAAVDQlggaeAAGSLFVWAAgNG 153
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760   834 QGKFQDFTYPHA-SNPNGSFRIGAA--KNTGSMADF------VGDAHELNFILPGHNVV---VNDRAYADVKDKDFQEFA 901
Cdd:pfam00082  154 SPGGNNGSSVGYpAQYKNVIAVGAVdeASEGNLASFssygptLDGRLKPDIVAPGGNITggnISSTLLTTTSDPPNQGYD 233
                          250
                   ....*....|...
gi 116180760   902 SHTGSSVATALAA 914
Cdd:pfam00082  234 SMSGTSMATPHVA 246
Peptidases_S8_Subtilisin_like cd07473
Peptidase S8 family domain in Subtilisin-like proteins; This family is a member of the ...
694-866 1.84e-11

Peptidase S8 family domain in Subtilisin-like proteins; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173799 [Multi-domain]  Cd Length: 259  Bit Score: 65.68  E-value: 1.84e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  694 PVTVALIDDGADITHPELNGKKFRGKSL----------HEYVD-GSGWRV-----SPYwhSASGHGTLMARLI---HR-- 752
Cdd:cd07473     3 DVVVAVIDTGVDYNHPDLKDNMWVNPGEipgngidddgNGYVDdIYGWNFvnndnDPM--DDNGHGTHVAGIIgavGNng 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  753 -----ICPSAIIYIIKlqtwipVGSNKLQIQPQSAIQAIEHAIEQGVQIISMSWTmKPPESAPVRNAFDTAIhrAKGILL 827
Cdd:cd07473    81 igiagVAWNVKIMPLK------FLGADGSGTTSDAIKAIDYAVDMGAKIINNSWG-GGGPSQALRDAIARAI--DAGILF 151
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 116180760  828 FCSASDQGKFQDFT--YPHASNPNGSFRIGAAKNTGSMADF 866
Cdd:cd07473   152 VAAAGNDGTNNDKTptYPASYDLDNIISVAATDSNDALASF 192
Peptidases_S8_8 cd07492
Peptidase S8 family domain, uncharacterized subfamily 8; This family is a member of the ...
694-849 3.67e-11

Peptidase S8 family domain, uncharacterized subfamily 8; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173817 [Multi-domain]  Cd Length: 222  Bit Score: 63.90  E-value: 3.67e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  694 PVTVALIDDGADITHPELNGKKFRGKSL--HEYVDgsgwrVSPYWHSASGHGTLMARLIHRICPSAIIYIIKlqtwipVG 771
Cdd:cd07492     1 GVRVAVIDSGVDTDHPDLGNLALDGEVTidLEIIV-----VSAEGGDKDGHGTACAGIIKKYAPEAEIGSIK------IL 69
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 116180760  772 SNKLQIQPQSAIQAIEHAIEQGVQIISMSWTMKPPESAP-VRNAFDTAIhrAKGILLFCSASDQGkfqDFTYPHASNPN 849
Cdd:cd07492    70 GEDGRCNSFVLEKALRACVENDIRIVNLSLGGPGDRDFPlLKELLEYAY--KAGGIIVAAAPNNN---DIGTPPASFPN 143
Peptidases_S8_15 cd07498
Peptidase S8 family domain, uncharacterized subfamily 15; This family is a member of the ...
695-879 1.73e-09

Peptidase S8 family domain, uncharacterized subfamily 15; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173822 [Multi-domain]  Cd Length: 242  Bit Score: 59.28  E-value: 1.73e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  695 VTVALIDDGADITHPELNGKKfrgkslheYVDgSGWRV----SPYwHSASGHGTLMARLI-----HRICPSAIIYIIKLq 765
Cdd:cd07498     1 VVVAIIDTGVDLNHPDLSGKP--------KLV-PGWNFvsnnDPT-SDIDGHGTACAGVAaavgnNGLGVAGVAPGAKL- 69
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  766 twIPVG-SNKLQIQPQSAI-QAIEHAIEQGVQIISMSWtmKPPESAP-VRNAFDTAIHRA---KGILLFCSASDQGKFQD 839
Cdd:cd07498    70 --MPVRiADSLGYAYWSDIaQAITWAADNGADVISNSW--GGSDSTEsISSAIDNAATYGrngKGGVVLFAAGNSGRSVS 145
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 116180760  840 FTYphASNPnGSFRIGAAKNTGSMADFVGDAHELNFILPG 879
Cdd:cd07498   146 SGY--AANP-SVIAVAATDSNDARASYSNYGNYVDLVAPG 182
Peptidases_S8_Autotransporter_serine_protease_like cd04848
Peptidase S8 family domain in Autotransporter serine proteases; Autotransporter serine ...
695-861 3.00e-09

Peptidase S8 family domain in Autotransporter serine proteases; Autotransporter serine proteases belong to Peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Autotransporters are a superfamily of outer membrane/secreted proteins of gram-negative bacteria. The presence of these subtilisin-like domains in these autotransporters are may enable them to be auto-catalytic and may also serve to allow them to act as a maturation protease cleaving other outer membrane proteins at the cell surface.


Pssm-ID: 173794 [Multi-domain]  Cd Length: 267  Bit Score: 59.26  E-value: 3.00e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  695 VTVALIDDGADITHPELNGKKFRGKSlheYVDGSGWRVSPYWHSaSGHGTLMARLI---------HRICPSAIIYIIKLQ 765
Cdd:cd04848     5 VKVGVIDSGIDLSHPEFAGRVSEASY---YVAVNDAGYASNGDG-DSHGTHVAGVIaaardgggmHGVAPDATLYSARAS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  766 TwipvgSNKLQIQPQSAIQAIEHAIEQGVQIISMSWTMKPPEsapvrnafDTAIHRAKGillfcSASDQGKFQDFTYPHA 845
Cdd:cd04848    81 A-----SAGSTFSDADIAAAYDFLAASGVRIINNSWGGNPAI--------DTVSTTYKG-----SAATQGNTLLAALARA 142
                         170
                  ....*....|....*.
gi 116180760  846 SNPNGSFrIGAAKNTG 861
Cdd:cd04848   143 ANAGGLF-VFAAGNDG 157
Peptidases_S8_1 cd07487
Peptidase S8 family domain, uncharacterized subfamily 1; This family is a member of the ...
695-835 2.36e-08

Peptidase S8 family domain, uncharacterized subfamily 1; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173812 [Multi-domain]  Cd Length: 264  Bit Score: 56.44  E-value: 2.36e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  695 VTVALIDDGADITHPELNGKKFRGKslhEYVDGSGWRVSPYwhSASGHGTLMARLI-----------HRICPSAIIYIIK 763
Cdd:cd07487     4 ITVAVLDTGIDAPHPDFDGRIIRFA---DFVNTVNGRTTPY--DDNGHGTHVAGIIagsgrasngkyKGVAPGANLVGVK 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  764 lqtwipV-----GSNKLQIqpqsaIQAIEHAIEQ----GVQIISMSWTMKPPESAPvRNAFDTAIHRA--KGILLFCSAS 832
Cdd:cd07487    79 ------VlddsgSGSESDI-----IAGIDWVVENnekyNIRVVNLSLGAPPDPSYG-EDPLCQAVERLwdAGIVVVVAAG 146

                  ...
gi 116180760  833 DQG 835
Cdd:cd07487   147 NSG 149
Peptidases_S8_Thermitase_like cd07484
Peptidase S8 family domain in Thermitase-like proteins; Thermitase is a non-specific, ...
695-890 2.18e-06

Peptidase S8 family domain in Thermitase-like proteins; Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53 the it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. There is a great diversity in the characteristics of their members: some contain disulfide bonds, some are intracellular while others are extracellular, some function at extreme temperatures, and others at high or low pH values.


Pssm-ID: 173810 [Multi-domain]  Cd Length: 260  Bit Score: 50.34  E-value: 2.18e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  695 VTVALIDDGADITHPELNGKKFRGKslHEYVDGSGwrvspYWHSASGHGTLMARLIHR----------ICPSAIIyiikl 764
Cdd:cd07484    30 VTVAVVDTGVDPTHPDLLKVKFVLG--YDFVDNDS-----DAMDDNGHGTHVAGIIAAatnngtgvagVAPKAKI----- 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  765 qtwIPV--------GSNklqiqpQSAIQAIEHAIEQGVQIISMSWTmKPPESAPVRNAFDTAihRAKGILLFCSASDQGk 836
Cdd:cd07484    98 ---MPVkvldangsGSL------ADIANGIRYAADKGAKVINLSLG-GGLGSTALQEAINYA--WNKGVVVVAAAGNEG- 164
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 116180760  837 FQDFTYPHASnpNGSFRIGAAKNTGSMADFVGDAHELNFILPGHNVVVN--DRAYA 890
Cdd:cd07484   165 VSSVSYPAAY--PGAIAVAATDQDDKRASFSNYGKWVDVSAPGGGILSTtpDGDYA 218
Peptidases_S8_4 cd05561
Peptidase S8 family domain, uncharacterized subfamily 4; This family is a member of the ...
695-849 7.62e-06

Peptidase S8 family domain, uncharacterized subfamily 4; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173797 [Multi-domain]  Cd Length: 239  Bit Score: 48.44  E-value: 7.62e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  695 VTVALIDDGADITHPELNGKKFRGKSlheyvDGSGWRVSPYWHS---AS---GHGTLMARLIhricPSAIIYIIKL--QT 766
Cdd:cd05561     1 VRVGMIDTGIDTAHPALSAVVIARLF-----FAGPGAPAPSAHGtavASllaGAGAQRPGLL----PGADLYGADVfgRA 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  767 WIPVGSNKLQIqpqsaIQAIEHAIEQGVQIISMSWTmKPPE---SAPVRNAfdtaihRAKGILLFCSASDQGKFQDFTYP 843
Cdd:cd05561    72 GGGEGASALAL-----ARALDWLAEQGVRVVNISLA-GPPNallAAAVAAA------AARGMVLVAAAGNDGPAAPPLYP 139

                  ....*.
gi 116180760  844 hASNPN 849
Cdd:cd05561   140 -AAYPG 144
Peptidases_S8_12 cd07480
Peptidase S8 family domain, uncharacterized subfamily 12; This family is a member of the ...
695-883 1.28e-05

Peptidase S8 family domain, uncharacterized subfamily 12; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173806 [Multi-domain]  Cd Length: 297  Bit Score: 48.14  E-value: 1.28e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  695 VTVALIDDGADITHPELNGKKFRGKSlheYVDGSGwrvspyWHSASGHGTLMARLI---------HRICPSAIIYIIKlq 765
Cdd:cd07480    10 VRVAVLDTGIDLTHPAFAGRDITTKS---FVGGED------VQDGHGHGTHCAGTIfgrdvpgprYGVARGAEIALIG-- 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  766 twipVGSNKLQIQPQSAIQAIEHAIEQGVQIISMS---------WTMKPPESAPVR---------NAFDTAIHR------ 821
Cdd:cd07480    79 ----KVLGDGGGGDGGILAGIQWAVANGADVISMSlgadfpglvDQGWPPGLAFSRaleayrqraRLFDALMTLvaaqaa 154
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  822 -AKGILLFCSA---SDQGKFQDFTYPHAsNPNGSFRIGAAKNTGSMADFVGDAH----ELNFILPGHNVV 883
Cdd:cd07480   155 lARGTLIVAAAgneSQRPAGIPPVGNPA-ACPSAMGVAAVGALGRTGNFSAVANfsngEVDIAAPGVDIV 223
Peptidases_S8_6 cd07490
Peptidase S8 family domain, uncharacterized subfamily 6; This family is a member of the ...
695-922 4.73e-05

Peptidase S8 family domain, uncharacterized subfamily 6; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173815 [Multi-domain]  Cd Length: 254  Bit Score: 46.00  E-value: 4.73e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  695 VTVALIDDGADITHPELNGKKFRGKSlheyVDGSGWRVSPYWHSASGHGTLMARLI---------HRICPSAIIYIIKLQ 765
Cdd:cd07490     2 VTVAVLDTGVDADHPDLAGRVAQWAD----FDENRRISATEVFDAGGHGTHVSGTIggggakgvyIGVAPEADLLHGKVL 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  766 twIPVGSNKLQIqpqsaIQAIEHAIEQGVQIISMSWTMKPPESAPVRNAFDtAIHRAKGILLFCSASDQGkfQDFTYPHA 845
Cdd:cd07490    78 --DDGGGSLSQI-----IAGMEWAVEKDADVVSMSLGGTYYSEDPLEEAVE-ALSNQTGALFVVSAGNEG--HGTSGSPG 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  846 SNPNgSFRIGAAKNTGSMADFVGDAHELNFIL-----PGHNVVVNDRAY--ADVKDKDFQEFASH-----TGSSVATALA 913
Cdd:cd07490   148 SAYA-ALSVGAVDRDDEDAWFSSFGSSGASLVsapdsPPDEYTKPDVAApgVDVYSARQGANGDGqytrlSGTSMAAPHV 226

                  ....*....
gi 116180760  914 AGLAALVME 922
Cdd:cd07490   227 AGVAALLAA 235
Peptidases_S8_thiazoline_oxidase_subtilisin-like_p cd07476
Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases; Thiazoline oxidase ...
695-800 2.07e-04

Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases; Thiazoline oxidase/subtilisin-like protease is produced by the symbiotic bacteria Prochloron spp. that inhabit didemnid family ascidians. The cyclic peptides of the patellamide class found in didemnid extracts are now known to be synthesized by the Prochloron spp. The prepatellamide is heterocyclized to form thiazole and oxazoline rings and the peptide is cleaved to form the two cyclic patellamides A and C. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution).


Pssm-ID: 173802 [Multi-domain]  Cd Length: 267  Bit Score: 44.24  E-value: 2.07e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  695 VTVALIDDGADITHPELNGKKFRgkslheYVDgSGWRVSPYWHSASGHGTLMARLI--------HRICPSAIIYIiklqt 766
Cdd:cd07476    12 ITIAILDGPVDRTHPCFRGANLT------PLF-TYAAAACQDGGASAHGTHVASLIfgqpcssvEGIAPLCRGLN----- 79
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 116180760  767 wIPVGS-NKLQIQPQSAIQAIEHAIEQGVQIISMS 800
Cdd:cd07476    80 -IPIFAeDRRGCSQLDLARAINLALEQGAHIINIS 113
Peptidases_S53_like cd05562
Peptidase domain in the S53 family; Members of the peptidase S53 (sedolisin) family include ...
695-857 3.79e-04

Peptidase domain in the S53 family; Members of the peptidase S53 (sedolisin) family include endopeptidases and exopeptidases. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functions as a tripeptidyl exopeptidase as well as an endopeptidase. Less is known about PSCP from Pseudomonas which is thought to be an aspartic proteinase.


Pssm-ID: 173798 [Multi-domain]  Cd Length: 275  Bit Score: 43.44  E-value: 3.79e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  695 VTVALIDDG--------ADITHPELNGkkfRGKSLHEYVDGSGwrvspywhsASGHGTLMARLIHRICPSAIIYiikLQT 766
Cdd:cd05562     7 IKIGVISDGfdglgdaaDDQASGDLPG---NVNVLGDLDGGSG---------GGDEGRAMLEIIHDIAPGAELA---FHT 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  767 wipVGSNKLQIqpqsaIQAIEHAIEQGVQII--SMSWTMKPP-ESAPVRNAFDTAIHRAkGILLFCSASDQGKfQDFTYP 843
Cdd:cd05562    72 ---AGGGELDF-----AAAIRALAAAGADIIvdDIGYLNEPFfQDGPIAQAVDEVVASP-GVLYFSSAGNDGQ-SGSIFG 141
                         170
                  ....*....|....
gi 116180760  844 HASNPnGSFRIGAA 857
Cdd:cd05562   142 HAAAP-GAIAVGAV 154
Ank_2 pfam12796
Ankyrin repeats (3 copies);
162-240 1.42e-03

Ankyrin repeats (3 copies);


Pssm-ID: 463710 [Multi-domain]  Cd Length: 91  Bit Score: 38.94  E-value: 1.42e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760   162 EYLKAECVEHD--NDREITCLHVAISANFKPELTAIIisfvpEEMFSVVDFKGRTPLHLAVEFDkccktQISIVTQLLHR 239
Cdd:pfam12796   14 KLLLENGADANlqDKNGRTALHLAAKNGHLEIVKLLL-----EHADVNLKDNGRTALHYAARSG-----HLEIVKLLLEK 83

                   .
gi 116180760   240 G 240
Cdd:pfam12796   84 G 84
Peptidases_S8_9 cd07493
Peptidase S8 family domain, uncharacterized subfamily 9; This family is a member of the ...
695-866 1.56e-03

Peptidase S8 family domain, uncharacterized subfamily 9; This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.


Pssm-ID: 173818 [Multi-domain]  Cd Length: 261  Bit Score: 41.52  E-value: 1.56e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  695 VTVALIDDG------ADITHPELNGKKFRGKslHEYVDGSgwrvSPYWHSASGHGTLMARLIHRICPSAII-------YI 761
Cdd:cd07493     2 ITIAVIDAGfpkvheAFAFKHLFKNLRILGE--YDFVDNS----NNTNYTDDDHGTAVLSTMAGYTPGVMVgtapnasYY 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  762 IkLQTWIpvGSNKLQIQPQSAIQAIEHAIEQGVQIISMS---WT-MKPPESAPVR--NAFDTAIHRA------KGILLFC 829
Cdd:cd07493    76 L-ARTED--VASETPVEEDNWVAAAEWADSLGVDIISSSlgyTTfDNPTYSYTYAdmDGKTSFISRAaniaasKGMLVVN 152
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 116180760  830 SASDQGKFQDFTYPHASNPNGSFRIGAAKNTGSMADF 866
Cdd:cd07493   153 SAGNEGSTQWKGIGAPADAENVLSVGAVDANGNKASF 189
Peptidases_S8_PCSK9_ProteinaseK_like cd04077
Peptidase S8 family domain in ProteinaseK-like proteins; The peptidase S8 or Subtilase clan of ...
695-831 2.75e-03

Peptidase S8 family domain in ProteinaseK-like proteins; The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding motifs found in these differ. Proteinase T is a novel proteinase from the fungus Tritirachium album Limber. The amino acid sequence of proteinase T as deduced from the nucleotide sequence is about 56% identical to that of proteinase K.


Pssm-ID: 173790 [Multi-domain]  Cd Length: 255  Bit Score: 40.58  E-value: 2.75e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  695 VTVALIDDGADITHPELNGkkfRGKSLHEYVDGSGWRvspywhSASGHGTLMARLI----HRICPSAIIYIIKLQTWIPV 770
Cdd:cd04077    27 VDVYVLDTGIRTTHVEFGG---RAIWGADFVGGDPDS------DCNGHGTHVAGTVggktYGVAKKANLVAVKVLDCNGS 97
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 116180760  771 GSNklqiqpQSAIQAIEHAIEQGVQ-----IISMSWtmkppeSAPVRNAFDTAIHRA--KGILLFCSA 831
Cdd:cd04077    98 GTL------SGIIAGLEWVANDATKrgkpaVANMSL------GGGASTALDAAVAAAvnAGVVVVVAA 153
Peptidases_S8_Protein_convertases_Kexins_Furin-lik cd04059
Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include ...
695-801 2.96e-03

Peptidase S8 family domain in Protein convertases; Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.


Pssm-ID: 173789 [Multi-domain]  Cd Length: 297  Bit Score: 41.01  E-value: 2.96e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 116180760  695 VTVALIDDGADITHPELNgKKFRGKSLHEYVDGSGwRVSPYWHSASGHGTLMARLI-----HRICPSAIIYIIKLqtwip 769
Cdd:cd04059    41 VTVAVVDDGLEITHPDLK-DNYDPEASYDFNDNDP-DPTPRYDDDNSHGTRCAGEIaavgnNGICGVGVAPGAKL----- 113
                          90       100       110
                  ....*....|....*....|....*....|...
gi 116180760  770 VGSNKLQIQPQSAIQAIEHAIE-QGVQIISMSW 801
Cdd:cd04059   114 GGIRMLDGDVTDVVEAESLGLNpDYIDIYSNSW 146
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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