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Conserved domains on  [gi|1191036393|ref|XP_020895408|]
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uncharacterized protein LOC110234369 isoform X4 [Exaiptasia diaphana]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FAM216B super family cl20976
FAM216B protein family; The function of this family of proteins, FAM216B, has not, as yet, ...
 168-219 2.31e-04

FAM216B protein family; The function of this family of proteins, FAM216B, has not, as yet, been determined. Members of this family are as yet uncharacterized. This family of proteins are found in eukaryotes. Proteins in this family are approximately 150 amino acids in length. In humans, the gene encoding this protein is located in the position, C13orf30.


The actual alignment was detected with superfamily member pfam15107:

Pssm-ID: 434464  Cd Length: 111  Bit Score: 40.19  E-value: 2.31e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1191036393 168 VNLPKFVQDNEFLthEDLSMGQKQYIWGIARIYSMSNLMDLKQRQYQSLLDH 219
Cdd:pfam15107  20 IRVPKSASDTSLL--KDLTQGQQRYLYSIMKIYNSRPQWEALKRRYIHSLQH 69
PHA03307 super family cl33723
transcriptional regulator ICP4; Provisional
 39-118 4.34e-03

transcriptional regulator ICP4; Provisional


The actual alignment was detected with superfamily member PHA03307:

Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 39.38  E-value: 4.34e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191036393   39 NRSEIQSLESTSTPVTPRTSGRAATRNGSRAGSAK-----SSTSRTEAARPGEMFEKPPSPVRPASSRSCPPSATFNSRS 113
Cdd:PHA03307   287 SSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSresssSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPR 366


                   ....*
gi 1191036393  114 RSCQP 118
Cdd:PHA03307   367 KRPRP 371
 
Name Accession Description Interval E-value
FAM216B pfam15107
FAM216B protein family; The function of this family of proteins, FAM216B, has not, as yet, ...
 168-219 2.31e-04

FAM216B protein family; The function of this family of proteins, FAM216B, has not, as yet, been determined. Members of this family are as yet uncharacterized. This family of proteins are found in eukaryotes. Proteins in this family are approximately 150 amino acids in length. In humans, the gene encoding this protein is located in the position, C13orf30.


Pssm-ID: 434464  Cd Length: 111  Bit Score: 40.19  E-value: 2.31e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1191036393 168 VNLPKFVQDNEFLthEDLSMGQKQYIWGIARIYSMSNLMDLKQRQYQSLLDH 219
Cdd:pfam15107  20 IRVPKSASDTSLL--KDLTQGQQRYLYSIMKIYNSRPQWEALKRRYIHSLQH 69
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 39-118 4.34e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 39.38  E-value: 4.34e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191036393   39 NRSEIQSLESTSTPVTPRTSGRAATRNGSRAGSAK-----SSTSRTEAARPGEMFEKPPSPVRPASSRSCPPSATFNSRS 113
Cdd:PHA03307   287 SSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSresssSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPR 366


                   ....*
gi 1191036393  114 RSCQP 118
Cdd:PHA03307   367 KRPRP 371
 
Name Accession Description Interval E-value
FAM216B pfam15107
FAM216B protein family; The function of this family of proteins, FAM216B, has not, as yet, ...
 168-219 2.31e-04

FAM216B protein family; The function of this family of proteins, FAM216B, has not, as yet, been determined. Members of this family are as yet uncharacterized. This family of proteins are found in eukaryotes. Proteins in this family are approximately 150 amino acids in length. In humans, the gene encoding this protein is located in the position, C13orf30.


Pssm-ID: 434464  Cd Length: 111  Bit Score: 40.19  E-value: 2.31e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1191036393 168 VNLPKFVQDNEFLthEDLSMGQKQYIWGIARIYSMSNLMDLKQRQYQSLLDH 219
Cdd:pfam15107  20 IRVPKSASDTSLL--KDLTQGQQRYLYSIMKIYNSRPQWEALKRRYIHSLQH 69
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 39-118 4.34e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 39.38  E-value: 4.34e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191036393   39 NRSEIQSLESTSTPVTPRTSGRAATRNGSRAGSAK-----SSTSRTEAARPGEMFEKPPSPVRPASSRSCPPSATFNSRS 113
Cdd:PHA03307   287 SSSSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSresssSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADPSSPR 366


                   ....*
gi 1191036393  114 RSCQP 118
Cdd:PHA03307   367 KRPRP 371
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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