|
Name |
Accession |
Description |
Interval |
E-value |
| PBP_1b |
TIGR02071 |
penicillin-binding protein 1B; Bacterial that synthesize a cell wall of peptidoglycan (murein) ... |
17-731 |
0e+00 |
|
penicillin-binding protein 1B; Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of a particular bifunctional transglycosylase/transpeptidase in E. coli and other Proteobacteria, designated penicillin-binding protein 1B. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273952 [Multi-domain] Cd Length: 730 Bit Score: 768.89 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 17 LVIAAFLVFsiYLIRLDSVVRDKFEGKRWDIPAKVFARPLEVYTNAPISQADFTQELKLLGYKSSENYTKSGNYVSSGNE 96
Cdd:TIGR02071 8 FTAAVLLAF--YGLYLDQQIRSRFDGKVWQLPAAVYARPLNLEPGMSLSKKELLIELDATQYRQVSHVTLPGEYSVQNNS 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 97 LYVHTRGFDFGDSVEPEQVLKVTFADEQVSEV-SATKPSSTGIARLEPMLIGGIYPQHNEDRVLIKLDKVPKPLIEALIA 175
Cdd:TIGR02071 86 IEVIRRPFDFPDGAEPQRRARLTFNGNQLSKIeNLDNNKEFGFFRLDPKLIAMLYSPNGEQRLFVPRDQFPELLVDTLLA 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 176 TEDRNFYSHHGISIRGTARAIVSNVTGGK-RQGGSTLTQQLVKNFYLTPEKTIKRKVNEAFMALLVELHYNKDEILEAYL 254
Cdd:TIGR02071 166 TEDRDFYEHDGISLYSIGRAVWVNLTAGRtVQGGSTLTQQLVKNLFLSNERSLWRKANEAYMALILDARYSKDRILELYL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 255 NEVNLGQNGNYSINGYGLASQFYFGMPLRELNIAQQAYLVGLVQGPTLYNPWRNPEAAKKRRDIVLHNMLVMGYLTQEQY 334
Cdd:TIGR02071 246 NEVYLGQSGDDAIHGFPLASQYYFGRPLGELSLDQVALLVGMVKGPSYYNPWRNPDRALERRNLVLRLLQEQKIIDDEEY 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 335 ETETARPLNVIAKPTLGpSRFPDFLDIVRRQLRTEYQEGDLTNQGLRIFTTLDPIAQTKIQDSFKATVNRLSRgSNRLKE 414
Cdd:TIGR02071 326 DMLSARPLGVQKKGGII-SRQPAFLQLVRRELRQKLGDKVKDLSGLRIFTTLDPVSQSAAEQAVQETIPALKK-KKKLPD 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 415 LQGAVLVAHPENGELVAAVGSTQ-DFTGFNRALDAKRQVGSLLKPVIYLSAI-QSGRYNWASPVEDSSISI-QSNGQSWT 491
Cdd:TIGR02071 404 LEAAMVVTDRFTGEVRAMVGGSDpQFAGFNRALQARRQIGSLVKPAVYLTALsQPDKYRLNTWIEDQPLSIkLSNGQVWS 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 492 PKNYSGGEHGVVPMVQALSHSYNLSSVRLGQEFGLSTFSNHLKRFGVT-SNIPSYPSIFLGAVDMSPMEVLGIYGNFATG 570
Cdd:TIGR02071 484 PQNYDRRYSGTVMLYDALAHSLNIPTVNLGMKVGLPKVSQTWNKLGINkDEIPPVPSMLLGAINLTPYEVAQLYQTIASG 563
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 571 GFKYPTKAIRTVVDQNGRLLTRYGLNVQQTIDPSSAYVLNYGLQQVMTSGTGRSAYNTLPtSLKLAGKSGTTNDTRDSWF 650
Cdd:TIGR02071 564 GNRAPLSAVRSVLDEDGKVLYQSDPQAEQAVPSQAAYLTLYAMQQVVQRGTARSLGADFP-SLSLAGKTGTTNDNRDSWF 642
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 651 AGYSGNYVSVVWLGLDDNKQTGLTGSSGALPVWTNVMSQLRQKPVNLRQPDDVQWHWIDSGSGYLAAQGCEGAMYIPLLR 730
Cdd:TIGR02071 643 AGIDGKEVTIIWLGRDDNGPTKLTGASGALQVYARYLSYQTPEPLLLVPPEGIDWFGVDPQGNGGCKANCPGARRLPIWT 722
|
.
gi 1191971857 731 N 731
Cdd:TIGR02071 723 G 723
|
|
| mrcB |
PRK09506 |
bifunctional glycosyl transferase/transpeptidase; Reviewed |
12-774 |
0e+00 |
|
bifunctional glycosyl transferase/transpeptidase; Reviewed
Pssm-ID: 236544 [Multi-domain] Cd Length: 830 Bit Score: 563.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 12 LIFCILVIAAfLVFSIYLIRLDSVVRDKFEGKRWDIPAKVFARPLEVYTNAPISQADFTQELKLLGYKSSENYTKSGNYV 91
Cdd:PRK09506 66 LLLKLFIVFA-VLIAIYGVYLDQKIRSRIDGKVWQLPAAVYGRMVNLEPGMSYSKNEMVKLLEATQYRQVSKMTRPGEFT 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 92 SSGNELYVHTRGFDFGDSVEPEQVLKVTFADEQVSEV-SATKPSSTGIARLEPMLIGGIYPQHNEDRVLIKLDKVPKPLI 170
Cdd:PRK09506 145 VQANSIEMIRRPFDFPDSKEGQVRARLTFDGDRLATIvNLDNNRQFGFFRLDPRLITMLQSPNGEQRLFVPRSGFPDLLV 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 171 EALIATEDRNFYSHHGISIRGTARAIVSNVTGGKR-QGGSTLTQQLVKNFYLTPEKTIKRKVNEAFMALLVELHYNKDEI 249
Cdd:PRK09506 225 DTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTvQGGSTLTQQLVKNLFLSNERSLWRKANEAYMALIMDARYSKDRI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 250 LEAYLNEVNLGQNGNYSINGYGLASQFYFGMPLRELNIAQQAYLVGLVQGPTLYNPWRNPEAAKKRRDIVLHNMLVMGYL 329
Cdd:PRK09506 305 LELYLNEVYLGQSGDDQIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASLYNPWRNPKLALERRNLVLRLLQQQQII 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 330 TQEQYETETARPLNViaKPTLGP-SRFPDFLDIVRRQLRTEYqeGDLTN--QGLRIFTTLDPIAQTKIQDSFKATVNRLs 406
Cdd:PRK09506 385 DQELYDMLSARPLGV--QPKGGViSPQPAFMQMVRQELQAKL--GDKVKdlSGVKIFTTLDPVSQDAAEKAVEEGIPAL- 459
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 407 RGSNRLKELQGAVLVAHPENGELVAAVGSTQ-DFTGFNRALDAKRQVGSLLKPVIYLSAI-QSGRYNWASPVEDSSISI- 483
Cdd:PRK09506 460 KKQRKLSDLETAMVVVDRFSGEVRAMVGGSEpQFAGYNRAMQARRSIGSLAKPATYLTALsQPDKYRLNTWIADAPISLr 539
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 484 QSNGQSWTPKNYSGGEHGVVPMVQALSHSYNLSSVRLGQEFGLSTFSNHLKRFGVTSN-IPSYPSIFLGAVDMSPMEVLG 562
Cdd:PRK09506 540 QPNGQVWSPQNDDRRFSGRVMLVDALTRSMNVPTVNLGMALGLPAVTDTWIKLGVPKDqLNPVPAMLLGALNLTPIEVAQ 619
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 563 IYGNFATGGFKYPTKAIRTVVDQNGRLLTRYGLNVQQTIDPSSAYVLNYGLQQVMTSGTGRSAYNTLPTsLKLAGKSGTT 642
Cdd:PRK09506 620 AFQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLYTMQQVVQRGTGRQLGAKYPN-LHLAGKTGTT 698
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 643 NDTRDSWFAGYSGNYVSVVWLGLDDNKQTGLTGSSGALPVWTNVMSQLRQKPVNLRQPDDVQWHWIDSGSGYLAAQGceG 722
Cdd:PRK09506 699 NDLVDSWFAGIDGKEVTITWVGRDNNQPTKLYGASGAMTIYQRYLENQTPTPLNLTPPEDIVDMGVDYDGNFVCGSG--G 776
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|...
gi 1191971857 723 AMYIPLLRNTiPRkaTACGLPHYQVEPTYNPETDGNQATPEQ-GDSIDNYIRE 774
Cdd:PRK09506 777 MRVLPVWTDD-PQ--SLCQQSEMQQQPSQPQQQPQQQPAEQKdSDGVAGWIKD 826
|
|
| MrcB |
COG0744 |
Membrane carboxypeptidase (penicillin-binding protein) [Cell wall/membrane/envelope biogenesis] ... |
115-700 |
0e+00 |
|
Membrane carboxypeptidase (penicillin-binding protein) [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 223815 [Multi-domain] Cd Length: 661 Bit Score: 556.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 115 VLKVTFADEQVSEVSATKPSSTGIARLEPMLIGGIYPQHnEDRVLIKLDKVPKPLIEALIATEDRNFYSHHGISIRGTAR 194
Cdd:COG0744 35 LALYVKLPILLDLLVPQTPKSTTIYDRDGKLILTLYSGE-EHREWVPLDQIPPNLKQALIAIEDRRFYEHHGIDPKGIGR 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 195 AIVSNVT--GGKRQGGSTLTQQLVKNFYLTPEKTIKRKVNEAFMALLVELHYNKDEILEAYLNEVNLGqNGNYsinGYGL 272
Cdd:COG0744 114 AALANNLsgGGVSQGGSTITQQLAKNLFLSNERTLDRKAKEAVLALWLEALYSKDEILEMYLNQVYFG-RGAY---GVEA 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 273 ASQFYFGMPLRELNIAQQAYLVGLVQGPTLYNPWRNPEAAKKRRDIVLHNMLVMGYLTQEQYETETARPLNVIAKPTLGP 352
Cdd:COG0744 190 AAQYYFGKPAKDLTLAQAALLAGLLKAPSLYNPYRPPEYARARRNLVLRRMVEQGYITAEEYDAALAEPLQVQQAKTVAT 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 353 SRFPDFLDIVRRQLRTEYQEGDLTNQGLRIFTTLDPIAQTKIQDSFKATVNRlsrgsnRLKELQGAVLVAHPENGELVAA 432
Cdd:COG0744 270 SPPPYFDDVVRQELAELLGESDLLTGGLKVYTTLDPELQEAAEKAVQADPLY------KLRDVQAALVLIDPKTGAVRAL 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 433 VGSTQD-FTGFNRALDAKRQVGSLLKPVIYLSAIQSGRYNWASPVEDSSISIqsngQSWTPKNYSGGEHGV-VPMVQALS 510
Cdd:COG0744 344 VGGRDYqPSGFNRATQAKRQPGSTFKPFLYYAALEEGKATPSTIVVDAPVTY----GNWSPKNYDGRYEGGsVTLREALA 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 511 HSYNLSSVRLGQEFGLSTFSNHLKRFGVTSNIPSYPSIFLGAVDMSPMEVLGIYGNFATGGFKYPTKAIRTVVDQNGRLL 590
Cdd:COG0744 420 TSLNIPAVRLLQKVGLDKVVDTAKKLGINSPLVPGPSLALGASEVSPLEMASAYATFANGGTYYPPHFIRKVTDADGVLY 499
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 591 tRYGLNVQQTIDPSSAYVLNYGLQQVMTS-GTGRSAYNTLPTslkLAGKSGTTNDTRDSWFAGYSGNYVSVVWLGLDDNK 669
Cdd:COG0744 500 -DNPPKVKRVLSPQAAYLMTDMLQGVVTPtGTGAAAKLPGPY---AAGKTGTTNDNRDAWFVGYTPQLTTAVWLGNDDNP 575
|
570 580 590
....*....|....*....|....*....|.
gi 1191971857 670 QTGLTGSSGALPVWTNVMSQLRQKPVNLRQP 700
Cdd:COG0744 576 LTPLTGGSDAAAIWKEFMGQALPGGLRVPFP 606
|
|
| Transgly |
pfam00912 |
Transglycosylase; The penicillin-binding proteins are bifunctional proteins consisting of ... |
149-323 |
6.37e-81 |
|
Transglycosylase; The penicillin-binding proteins are bifunctional proteins consisting of transglycosylase and transpeptidase in the N- and C-terminus respectively. The transglycosylase domain catalyzes the polymerization of murein glycan chains.
Pssm-ID: 425943 [Multi-domain] Cd Length: 177 Bit Score: 256.68 E-value: 6.37e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 149 IYPQHNEDRVLIKLDKVPKPLIEALIATEDRNFYSHHGISIRGTARAIVSNVTGGKR-QGGSTLTQQLVKNFYLTPEKTI 227
Cdd:pfam00912 5 LAELGEENRTWVPLDDIPPALKNAVLAIEDRRFYEHGGVDPKGIARALLKNLRSGRIvQGGSTITQQLAKNLFLTPERTL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 228 KRKVNEAFMALLVELHYNKDEILEAYLNEVNLGQNgnysINGYGLASQFYFGMPLRELNIAQQAYLVGLVQGPTLYNPWR 307
Cdd:pfam00912 85 TRKLKEAVLALKLERRYSKDEILEAYLNTVYFGGG----AYGIEAAARAYFGKDASDLTLAEAALLAGLPQAPSRYNPLR 160
|
170
....*....|....*.
gi 1191971857 308 NPEAAKKRRDIVLHNM 323
Cdd:pfam00912 161 NPERAKRRRNLVLDRM 176
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| PBP_1b |
TIGR02071 |
penicillin-binding protein 1B; Bacterial that synthesize a cell wall of peptidoglycan (murein) ... |
17-731 |
0e+00 |
|
penicillin-binding protein 1B; Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of a particular bifunctional transglycosylase/transpeptidase in E. coli and other Proteobacteria, designated penicillin-binding protein 1B. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273952 [Multi-domain] Cd Length: 730 Bit Score: 768.89 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 17 LVIAAFLVFsiYLIRLDSVVRDKFEGKRWDIPAKVFARPLEVYTNAPISQADFTQELKLLGYKSSENYTKSGNYVSSGNE 96
Cdd:TIGR02071 8 FTAAVLLAF--YGLYLDQQIRSRFDGKVWQLPAAVYARPLNLEPGMSLSKKELLIELDATQYRQVSHVTLPGEYSVQNNS 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 97 LYVHTRGFDFGDSVEPEQVLKVTFADEQVSEV-SATKPSSTGIARLEPMLIGGIYPQHNEDRVLIKLDKVPKPLIEALIA 175
Cdd:TIGR02071 86 IEVIRRPFDFPDGAEPQRRARLTFNGNQLSKIeNLDNNKEFGFFRLDPKLIAMLYSPNGEQRLFVPRDQFPELLVDTLLA 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 176 TEDRNFYSHHGISIRGTARAIVSNVTGGK-RQGGSTLTQQLVKNFYLTPEKTIKRKVNEAFMALLVELHYNKDEILEAYL 254
Cdd:TIGR02071 166 TEDRDFYEHDGISLYSIGRAVWVNLTAGRtVQGGSTLTQQLVKNLFLSNERSLWRKANEAYMALILDARYSKDRILELYL 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 255 NEVNLGQNGNYSINGYGLASQFYFGMPLRELNIAQQAYLVGLVQGPTLYNPWRNPEAAKKRRDIVLHNMLVMGYLTQEQY 334
Cdd:TIGR02071 246 NEVYLGQSGDDAIHGFPLASQYYFGRPLGELSLDQVALLVGMVKGPSYYNPWRNPDRALERRNLVLRLLQEQKIIDDEEY 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 335 ETETARPLNVIAKPTLGpSRFPDFLDIVRRQLRTEYQEGDLTNQGLRIFTTLDPIAQTKIQDSFKATVNRLSRgSNRLKE 414
Cdd:TIGR02071 326 DMLSARPLGVQKKGGII-SRQPAFLQLVRRELRQKLGDKVKDLSGLRIFTTLDPVSQSAAEQAVQETIPALKK-KKKLPD 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 415 LQGAVLVAHPENGELVAAVGSTQ-DFTGFNRALDAKRQVGSLLKPVIYLSAI-QSGRYNWASPVEDSSISI-QSNGQSWT 491
Cdd:TIGR02071 404 LEAAMVVTDRFTGEVRAMVGGSDpQFAGFNRALQARRQIGSLVKPAVYLTALsQPDKYRLNTWIEDQPLSIkLSNGQVWS 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 492 PKNYSGGEHGVVPMVQALSHSYNLSSVRLGQEFGLSTFSNHLKRFGVT-SNIPSYPSIFLGAVDMSPMEVLGIYGNFATG 570
Cdd:TIGR02071 484 PQNYDRRYSGTVMLYDALAHSLNIPTVNLGMKVGLPKVSQTWNKLGINkDEIPPVPSMLLGAINLTPYEVAQLYQTIASG 563
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 571 GFKYPTKAIRTVVDQNGRLLTRYGLNVQQTIDPSSAYVLNYGLQQVMTSGTGRSAYNTLPtSLKLAGKSGTTNDTRDSWF 650
Cdd:TIGR02071 564 GNRAPLSAVRSVLDEDGKVLYQSDPQAEQAVPSQAAYLTLYAMQQVVQRGTARSLGADFP-SLSLAGKTGTTNDNRDSWF 642
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 651 AGYSGNYVSVVWLGLDDNKQTGLTGSSGALPVWTNVMSQLRQKPVNLRQPDDVQWHWIDSGSGYLAAQGCEGAMYIPLLR 730
Cdd:TIGR02071 643 AGIDGKEVTIIWLGRDDNGPTKLTGASGALQVYARYLSYQTPEPLLLVPPEGIDWFGVDPQGNGGCKANCPGARRLPIWT 722
|
.
gi 1191971857 731 N 731
Cdd:TIGR02071 723 G 723
|
|
| mrcB |
PRK09506 |
bifunctional glycosyl transferase/transpeptidase; Reviewed |
12-774 |
0e+00 |
|
bifunctional glycosyl transferase/transpeptidase; Reviewed
Pssm-ID: 236544 [Multi-domain] Cd Length: 830 Bit Score: 563.24 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 12 LIFCILVIAAfLVFSIYLIRLDSVVRDKFEGKRWDIPAKVFARPLEVYTNAPISQADFTQELKLLGYKSSENYTKSGNYV 91
Cdd:PRK09506 66 LLLKLFIVFA-VLIAIYGVYLDQKIRSRIDGKVWQLPAAVYGRMVNLEPGMSYSKNEMVKLLEATQYRQVSKMTRPGEFT 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 92 SSGNELYVHTRGFDFGDSVEPEQVLKVTFADEQVSEV-SATKPSSTGIARLEPMLIGGIYPQHNEDRVLIKLDKVPKPLI 170
Cdd:PRK09506 145 VQANSIEMIRRPFDFPDSKEGQVRARLTFDGDRLATIvNLDNNRQFGFFRLDPRLITMLQSPNGEQRLFVPRSGFPDLLV 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 171 EALIATEDRNFYSHHGISIRGTARAIVSNVTGGKR-QGGSTLTQQLVKNFYLTPEKTIKRKVNEAFMALLVELHYNKDEI 249
Cdd:PRK09506 225 DTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTvQGGSTLTQQLVKNLFLSNERSLWRKANEAYMALIMDARYSKDRI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 250 LEAYLNEVNLGQNGNYSINGYGLASQFYFGMPLRELNIAQQAYLVGLVQGPTLYNPWRNPEAAKKRRDIVLHNMLVMGYL 329
Cdd:PRK09506 305 LELYLNEVYLGQSGDDQIRGFPLASLYYFGRPVEELSLDQQALLVGMVKGASLYNPWRNPKLALERRNLVLRLLQQQQII 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 330 TQEQYETETARPLNViaKPTLGP-SRFPDFLDIVRRQLRTEYqeGDLTN--QGLRIFTTLDPIAQTKIQDSFKATVNRLs 406
Cdd:PRK09506 385 DQELYDMLSARPLGV--QPKGGViSPQPAFMQMVRQELQAKL--GDKVKdlSGVKIFTTLDPVSQDAAEKAVEEGIPAL- 459
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 407 RGSNRLKELQGAVLVAHPENGELVAAVGSTQ-DFTGFNRALDAKRQVGSLLKPVIYLSAI-QSGRYNWASPVEDSSISI- 483
Cdd:PRK09506 460 KKQRKLSDLETAMVVVDRFSGEVRAMVGGSEpQFAGYNRAMQARRSIGSLAKPATYLTALsQPDKYRLNTWIADAPISLr 539
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 484 QSNGQSWTPKNYSGGEHGVVPMVQALSHSYNLSSVRLGQEFGLSTFSNHLKRFGVTSN-IPSYPSIFLGAVDMSPMEVLG 562
Cdd:PRK09506 540 QPNGQVWSPQNDDRRFSGRVMLVDALTRSMNVPTVNLGMALGLPAVTDTWIKLGVPKDqLNPVPAMLLGALNLTPIEVAQ 619
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 563 IYGNFATGGFKYPTKAIRTVVDQNGRLLTRYGLNVQQTIDPSSAYVLNYGLQQVMTSGTGRSAYNTLPTsLKLAGKSGTT 642
Cdd:PRK09506 620 AFQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLYTMQQVVQRGTGRQLGAKYPN-LHLAGKTGTT 698
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 643 NDTRDSWFAGYSGNYVSVVWLGLDDNKQTGLTGSSGALPVWTNVMSQLRQKPVNLRQPDDVQWHWIDSGSGYLAAQGceG 722
Cdd:PRK09506 699 NDLVDSWFAGIDGKEVTITWVGRDNNQPTKLYGASGAMTIYQRYLENQTPTPLNLTPPEDIVDMGVDYDGNFVCGSG--G 776
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|...
gi 1191971857 723 AMYIPLLRNTiPRkaTACGLPHYQVEPTYNPETDGNQATPEQ-GDSIDNYIRE 774
Cdd:PRK09506 777 MRVLPVWTDD-PQ--SLCQQSEMQQQPSQPQQQPQQQPAEQKdSDGVAGWIKD 826
|
|
| MrcB |
COG0744 |
Membrane carboxypeptidase (penicillin-binding protein) [Cell wall/membrane/envelope biogenesis] ... |
115-700 |
0e+00 |
|
Membrane carboxypeptidase (penicillin-binding protein) [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 223815 [Multi-domain] Cd Length: 661 Bit Score: 556.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 115 VLKVTFADEQVSEVSATKPSSTGIARLEPMLIGGIYPQHnEDRVLIKLDKVPKPLIEALIATEDRNFYSHHGISIRGTAR 194
Cdd:COG0744 35 LALYVKLPILLDLLVPQTPKSTTIYDRDGKLILTLYSGE-EHREWVPLDQIPPNLKQALIAIEDRRFYEHHGIDPKGIGR 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 195 AIVSNVT--GGKRQGGSTLTQQLVKNFYLTPEKTIKRKVNEAFMALLVELHYNKDEILEAYLNEVNLGqNGNYsinGYGL 272
Cdd:COG0744 114 AALANNLsgGGVSQGGSTITQQLAKNLFLSNERTLDRKAKEAVLALWLEALYSKDEILEMYLNQVYFG-RGAY---GVEA 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 273 ASQFYFGMPLRELNIAQQAYLVGLVQGPTLYNPWRNPEAAKKRRDIVLHNMLVMGYLTQEQYETETARPLNVIAKPTLGP 352
Cdd:COG0744 190 AAQYYFGKPAKDLTLAQAALLAGLLKAPSLYNPYRPPEYARARRNLVLRRMVEQGYITAEEYDAALAEPLQVQQAKTVAT 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 353 SRFPDFLDIVRRQLRTEYQEGDLTNQGLRIFTTLDPIAQTKIQDSFKATVNRlsrgsnRLKELQGAVLVAHPENGELVAA 432
Cdd:COG0744 270 SPPPYFDDVVRQELAELLGESDLLTGGLKVYTTLDPELQEAAEKAVQADPLY------KLRDVQAALVLIDPKTGAVRAL 343
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 433 VGSTQD-FTGFNRALDAKRQVGSLLKPVIYLSAIQSGRYNWASPVEDSSISIqsngQSWTPKNYSGGEHGV-VPMVQALS 510
Cdd:COG0744 344 VGGRDYqPSGFNRATQAKRQPGSTFKPFLYYAALEEGKATPSTIVVDAPVTY----GNWSPKNYDGRYEGGsVTLREALA 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 511 HSYNLSSVRLGQEFGLSTFSNHLKRFGVTSNIPSYPSIFLGAVDMSPMEVLGIYGNFATGGFKYPTKAIRTVVDQNGRLL 590
Cdd:COG0744 420 TSLNIPAVRLLQKVGLDKVVDTAKKLGINSPLVPGPSLALGASEVSPLEMASAYATFANGGTYYPPHFIRKVTDADGVLY 499
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 591 tRYGLNVQQTIDPSSAYVLNYGLQQVMTS-GTGRSAYNTLPTslkLAGKSGTTNDTRDSWFAGYSGNYVSVVWLGLDDNK 669
Cdd:COG0744 500 -DNPPKVKRVLSPQAAYLMTDMLQGVVTPtGTGAAAKLPGPY---AAGKTGTTNDNRDAWFVGYTPQLTTAVWLGNDDNP 575
|
570 580 590
....*....|....*....|....*....|.
gi 1191971857 670 QTGLTGSSGALPVWTNVMSQLRQKPVNLRQP 700
Cdd:COG0744 576 LTPLTGGSDAAAIWKEFMGQALPGGLRVPFP 606
|
|
| PBP_1a_fam |
TIGR02074 |
penicillin-binding protein, 1A family; Bacterial that synthesize a cell wall of peptidoglycan ... |
156-693 |
0e+00 |
|
penicillin-binding protein, 1A family; Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of bifunctional transglycosylase/transpeptidase penicillin-binding proteins (PBP). In the Proteobacteria, this family includes PBP 1A but not the paralogous PBP 1B (TIGR02071). This family also includes related proteins, often designated PBP 1A, from other bacterial lineages. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273955 [Multi-domain] Cd Length: 531 Bit Score: 546.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 156 DRVLIKLDKVPKPLIEALIATEDRNFYSHHGISIRGTARAIVSNVT-GGKRQGGSTLTQQLVKNFYLTPEKTIKRKVNEA 234
Cdd:TIGR02074 1 RREYVPIDDIPENLINAFLAIEDRRFYDHFGIDLKGIGRAAVANITsGRVLEGGSTITQQLAKNLYLTNERTITRKIQEA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 235 FMALLVELHYNKDEILEAYLNEVNLGqNGNYSINGyglASQFYFGMPLRELNIAQQAYLVGLVQGPTLYNPWRNPEAAKK 314
Cdd:TIGR02074 81 LLALKLEQKLSKDEILELYLNRIYFG-NGAYGIEA---AAQFYFGKSVNDLTLAEAAMLAGLPKAPSAYNPFKNPERAKD 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 315 RRDIVLHNMLVMGYLTQEQYETETARPLNVIAK-PTLGPSRFPDFLDIVRRQLRTEYQEgDLTNQGLRIFTTLDPIAQTK 393
Cdd:TIGR02074 157 RRNLVLSNMVENGYITAEEAEEAINEPIQLYLQtKKSEQYKAPYFVDYVIQELEEEYGE-ELYTGGLKIYTTLDLDAQKA 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 394 IQDSFKATVNRLSRGSNrlKELQGAVLVAHPENGELVAAVGStQDFT--GFNRALDAKRQVGSLLKPVIYLSAIQSGrYN 471
Cdd:TIGR02074 236 AEKVLNTGLRVAGRRDG--DDLQAALVAIDPDTGAVRALVGG-RDYGksQFNRATQAKRQPGSTFKPFVYAAALEKG-LT 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 472 WASPVEDSSISIQSNGqSWTPKNYSGGEHGVVPMVQALSHSYNLSSVRLGQEFGLSTFSNHLKRFGVTSNIPSYPSIFLG 551
Cdd:TIGR02074 312 PATIVNDEPITYNGNG-PWSPKNYGGGYRGNVTLRQALAQSRNIPAVRLLQEVGLDKVVALAKRFGITSPLDPVLSLALG 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 552 AVDMSPMEVLGIYGNFATGGFKYPTKAIRTVVDQNGRLLTRYGLNVQQTIDPSSAYVLNYGLQQVMTSGTGRSAYntlPT 631
Cdd:TIGR02074 391 TVEVSPLEMASAYAVFANGGKYVEPHGIRKIVDRDGKVIYENKPKTTQVISPATAYIMTDMLKGVVESGTGRSAR---LP 467
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1191971857 632 SLKLAGKSGTTNDTRDSWFAGYSGNYVSVVWLGLDDNKQTGLTGSSG--ALPVWTNVMSQLRQK 693
Cdd:TIGR02074 468 GRPVAGKTGTTQNWRDAWFVGYTPYYVTAVWVGYDDKKTLGKSGTGGglAAPIWRDFMAEALKN 531
|
|
| PRK14850 |
PRK14850 |
penicillin-binding protein 1b; Provisional |
23-709 |
2.09e-172 |
|
penicillin-binding protein 1b; Provisional
Pssm-ID: 237835 [Multi-domain] Cd Length: 764 Bit Score: 515.55 E-value: 2.09e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 23 LVFSIYLIRLDSVVRDKFEGKRWDIPAKVFARPLEVYTNAPISQADFTQELKLLGYKSSENYTKSGNYVSSGNELYVHTR 102
Cdd:PRK14850 22 LLILCYGVYLYVKINRFINGKVWNFPTSIYSRIVNLEPGNSYSQKDVIHLLKSTMYRKVDLVTLPGEFSVKNNTIELIRR 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 103 GFDFGDSVEPEQVLKVTF-ADEQVSEVSATKPSSTGIARLEPMLIGGIYPQHNEDRVLIKLDKVPKPLIEALIATEDRNF 181
Cdd:PRK14850 102 SFDFPDIREDEIHARLYFnKDKLVRIKNIDNNHDFSFLRLDPKLIAMLYSPEGKKRLFIPRNQYPEMLIKTLLAIEDKYF 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 182 YSHHGISIRGTARAIVSNVTGGKR-QGGSTLTQQLVKNFYLTPEKTIKRKVNEAFMALLVELHYNKDEILEAYLNEVNLG 260
Cdd:PRK14850 182 YEHDGIHLSSIGRAFLVNLMSGHTiQGGSTLTQQLVKNLFLTNTRSLWRKINEIYMALILDRFYSKDRILELYLNEVYLG 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 261 QNGNYSINGYGLASQFYFGMPLRELNIAQQAYLVGLVQGPTLYNPWRNPEAAKKRRDIVLHNMLVMGYLTQEQYETETAR 340
Cdd:PRK14850 262 QDGNEQIRGFPLASIYYFGRPINELNLDQYALLVGMVKGASLYNPWTNPNLTLKRRNLVLFLLYKQKVITRKLYKDLCSR 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 341 PLNVIAKPTLGPSRfPDFLDIVRRQL--RTEYQEGDLTnqGLRIFTTLDPIAQTKIQDSFKATVNRLSRgSNRLKELQGA 418
Cdd:PRK14850 342 PLNVQSKGNIISSH-PAFIQLVCEEFhkKIHYPFKNFS--GTKIFTTLDYISQNAAEQAVKIGIPILKR-KKRLKDLEVA 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 419 VLVAHPENGELVAAVGSTQ-DFTGFNRALDAKRQVGSLLKPVIYLSAI-QSGRYNWASPVEDSSISIQ-SNGQSWTPKNY 495
Cdd:PRK14850 418 MVIIDRFSGEVRALIGSSKpEFNGYNRALKARRSIGSLSKPITYLTALsQPEKYHLNTWISDTPISIKlDNGQYWTPKNN 497
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 496 SGGEHGVVPMVQALSHSYNLSSVRLGQEFGLSTFSNHLKRFGVTSN-IPSYPSIFLGAVDMSPMEVLGIYGNFATGGFKY 574
Cdd:PRK14850 498 NFSFSGKVMLIDALIHSINIPTVHLSINLGLKKLVDSWILLGISSNyITPLPSISLGAINLTPMEVAQVFQIIGSGGYKS 577
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 575 PTKAIRTVVDQNGRLLTRYGLNVQQTIDPSSAYVLNYGLQQVMTSGTGRSaYNTLPTSLKLAGKSGTTNDTRDSWFAGYS 654
Cdd:PRK14850 578 SLSSIRSIISDDNKVLYQNFPQSKHVESSQASYLTLYAMQQVVKSGTAKS-LGTIFKEFSLAGKTGTTNNLVDSWFVGID 656
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 1191971857 655 GNYVSVVWLGLDDNKQTGLTGSSGALPVWTNVMSQLRQKPVNLRQPDDVQWHWID 709
Cdd:PRK14850 657 GKQVVITWIGRDNNHTTKLYGSSGAMKIYKRYLQYQNPVPLVLKAPNNINMFYIN 711
|
|
| MrcA |
COG5009 |
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis]; |
155-771 |
1.08e-154 |
|
Membrane carboxypeptidase/penicillin-binding protein [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 227342 [Multi-domain] Cd Length: 797 Bit Score: 471.03 E-value: 1.08e-154
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 155 EDRVLIKLDKVPKPLIEALIATEDRNFYSHHGISIRGTARAIVSNVTGGKR-QGGSTLTQQLVKNFYLTPEKTIKRKVNE 233
Cdd:COG5009 65 ERRIPVPIDDIPDRLINAFLAAEDKRFYEHHGVDPIGIFRAAFVNLTNGGRsQGASTITQQVAKNFFLSSERTLERKIKE 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 234 AFMALLVELHYNKDEILEAYLNEVNLGqNGNYsinGYGLASQFYFGMPLRELNIAQQAYLVGLVQGPTLYNPWRNPEAAK 313
Cdd:COG5009 145 ALLAIRIEQSLSKDEILELYLNKIYLG-YRAY---GVAAAAQTYFGKSVNELTLAEAAMLAGLPKAPSNYNPLYNPERAK 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 314 KRRDIVLHNMLVMGYLTQEQYETETARPLNViaKPTLGPSRF--PDFLDIVRRQLRTEYQEGDLTNQGLRIFTTLDPIAQ 391
Cdd:COG5009 221 ERRNYVLNRMLEEGYITQEQADEAKAEPLVA--KYHGPEIAFsaPYFAEMVRQEMIRRYGEEAAYTGGYSVYTTLDLKLQ 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 392 ------------------------TKI----------------------------------------QDSFKAT------ 401
Cdd:COG5009 299 kaaqkalrnglldydrrhgyrgpeAHIelsgedwwdelaisdtlsdvgellpavvlsvaksgakiglADGSKVTlsmeam 378
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 402 ------------------------VNRLSRGSNRLK---ELQGAVLVAHPENGELVAAVGSTqDFTG--FNRALDAKRQV 452
Cdd:COG5009 379 rwarrllsdnkspedvlkpgdviyVRKNGGGGWRLRqipEVNGALVSLDPKTGAILALVGGF-SFAQskFNRATQALRQP 457
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 453 GSLLKPVIYLSAIQSGrYNWASPVEDSSISIQSNGQ--SWTPKNYSGGEHGVVPMVQALSHSYNLSSVRLGQEFGLSTFS 530
Cdd:COG5009 458 GSSFKPFVYSAALDKG-LTPASVINDAPISFWDGGGggVWRPKNYGGKFAGPITLRQGLEQSRNLVAVRLLDAVGVDYAA 536
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 531 NHLKRFGV-TSNIPSYPSIFLGAVDMSPMEVLGIYGNFATGGFKYPTKAIRTVVDQNGRLLTR----------------- 592
Cdd:COG5009 537 EYIKRFGFyTDELPPVLSMALGSGETTPLQMARAYAVFANGGKRVEPYFIDRIEDRNGKVIFRaeprvccrcnadeannq 616
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 593 ----YGLNVQQTIDPSSAYVLNYGLQQVMTSGTGRSAyntlpTSLK---LAGKSGTTNDTRDSWFAGYSGNYVSVVWLGL 665
Cdd:COG5009 617 eeqtLADYAPQVIDPMTAYQITSMLRGVVQRGTAARA-----GRLGrpdIAGKTGTTNDSKDAWFVGYTPDLVTGVWVGF 691
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 666 DDNKQTGL--TGSSGALPVWTNVMSQ-LRQKP-VNLRQPDDVQWHWIDSGSGYLAAQGCEGAMYIPLLRNTIPRKATAcg 741
Cdd:COG5009 692 DHPRSLGRgeTGGKLALPIWIDFMKVaLKGKPeKDFVPPPGIVSINIDRKTGLLANEGAPKTIIEYFIPGTQPTETES-- 769
|
730 740 750
....*....|....*....|....*....|
gi 1191971857 742 lpHYQVEPTYNPETDGNQATPEQGDSIDNY 771
Cdd:COG5009 770 --VEGQRGFEIPDDDVPNANASNGQILELF 797
|
|
| PbpC |
COG4953 |
Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope ... |
157-687 |
2.21e-83 |
|
Membrane carboxypeptidase/penicillin-binding protein PbpC [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 227289 [Multi-domain] Cd Length: 733 Bit Score: 281.20 E-value: 2.21e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 157 RVLIKLDKVPKPLIEALIATEDRNFYSHHGISIRGTARAIVSNVTGGKR-QGGSTLTQQLVKnfYLTP-EKTIKRKVNEA 234
Cdd:COG4953 58 RIPTPLEEVSPQFIEALINYEDKRFYWHPGVDPLALLRAAWQTLTSGRVvSGGSTLTMQVAR--LLEPrPRTLGGKIRQI 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 235 FMALLVELHYNKDEILEAYLNEVNLGQNgnysINGYGLASQFYFGMPLRELNIAQQAYLVGLVQGPTLYNPWRNPEAAKK 314
Cdd:COG4953 136 WRAIQLESRLSKREILELYLNRAPYGGN----IEGVRAASLAYFGKEPKRLSLAEAALLAVLPQNPERRRPDRNPEAAEA 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 315 RRDIVLHNMLVMGYLTQEQ-YETETARPLNVIAKPtlgPSRFPDFLDivrrQLRTEYQEGDltnqglRIFTTLDPIAQTK 393
Cdd:COG4953 212 ARNRVLTRMAVQGVWSEEEaKRARLEPVPNRRRQL---PFLAPHFAF----RLLNQYPKGD------IIVTTLDANLQRR 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 394 IQDSFKATVNRLSRGSNrlkelqGAVLVAHPENGELVAAVGStQDF-----TGFNRALDAKRQVGSLLKPVIYLSAIQSG 468
Cdd:COG4953 279 LEEQARDYASRLGPRNS------AAVLVVDNRTMEVLAYVGS-ADFfdasrSGHIDMVRALRSPGSTLKPFVYGLAFDQG 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 469 RYNWASPVEDSSISIqsngQSWTPKNYSGGEHGVVPMVQALSHSYNLSSVRLGQEFGLSTFSNHLKRFGVTsniPSYP-- 546
Cdd:COG4953 352 LIHPETLLKDVPTRF----GDYRPENFDSNFHGPVSVREALIKSLNIPAVRLLEAVGPPRFAARLRQAGVH---LYLPeg 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 547 -----SIFLGAVDMSPMEVLGIYGNFATGGfkyPTKAIRTVVDQnGRLLTRyglnvqQTIDPSSAYVLNYGLQQVMTSGT 621
Cdd:COG4953 425 aapglSLILGGAGITLEDLAQLYAALANQG---KAGPLRDTLDD-DPLTER------TLLSPGAAWQILDILSDVARPGL 494
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1191971857 622 GRsayNTLPTSLKLAGKSGTTNDTRDSWFAGYSGNYVSVVWLGLDDNKQT-GLTGSSGALPVWTNVM 687
Cdd:COG4953 495 PN---GALPSVRPIAWKTGTSYGYRDAWSVGVFGRYVLGVWVGRFDGTPVpGLSGVATAAPLLFQVN 558
|
|
| Transgly |
pfam00912 |
Transglycosylase; The penicillin-binding proteins are bifunctional proteins consisting of ... |
149-323 |
6.37e-81 |
|
Transglycosylase; The penicillin-binding proteins are bifunctional proteins consisting of transglycosylase and transpeptidase in the N- and C-terminus respectively. The transglycosylase domain catalyzes the polymerization of murein glycan chains.
Pssm-ID: 425943 [Multi-domain] Cd Length: 177 Bit Score: 256.68 E-value: 6.37e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 149 IYPQHNEDRVLIKLDKVPKPLIEALIATEDRNFYSHHGISIRGTARAIVSNVTGGKR-QGGSTLTQQLVKNFYLTPEKTI 227
Cdd:pfam00912 5 LAELGEENRTWVPLDDIPPALKNAVLAIEDRRFYEHGGVDPKGIARALLKNLRSGRIvQGGSTITQQLAKNLFLTPERTL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 228 KRKVNEAFMALLVELHYNKDEILEAYLNEVNLGQNgnysINGYGLASQFYFGMPLRELNIAQQAYLVGLVQGPTLYNPWR 307
Cdd:pfam00912 85 TRKLKEAVLALKLERRYSKDEILEAYLNTVYFGGG----AYGIEAAARAYFGKDASDLTLAEAALLAGLPQAPSRYNPLR 160
|
170
....*....|....*.
gi 1191971857 308 NPEAAKKRRDIVLHNM 323
Cdd:pfam00912 161 NPERAKRRRNLVLDRM 176
|
|
| mrcA |
PRK11636 |
penicillin-binding protein 1a; Provisional |
140-719 |
2.60e-74 |
|
penicillin-binding protein 1a; Provisional
Pssm-ID: 183248 [Multi-domain] Cd Length: 850 Bit Score: 258.91 E-value: 2.60e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 140 RLE-PMLI----GGIYPQHNEDRVL-IKLDKVPKPLIEALIATEDRNFYSHHGISIRGTARAI-VSNVTGGKRQGGSTLT 212
Cdd:PRK11636 43 RLQtPMQVysadGELIAQYGEKRRIpLTLDQIPPEMVKAFIATEDSRFYEHHGVDPVGIFRAAsVALFSGHASQGASTIT 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 213 QQLVKNFYLTPEKTIKRKVNEAFMALLVELHYNKDEILEAYLNEVNLGqngnYSINGYGLASQFYFGMPLRELNIAQQAY 292
Cdd:PRK11636 123 QQLARNFFLSPERTLMRKIKEAFLAIRIEQLLTKDEILELYLNKIYLG----YRAYGVGAAAQVYFGKTVDQLTLSEMAV 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 293 LVGLVQGPTLYNPWRNPEAAKKRRDIVLHNMLVMGYLTQEQYETETARPLNV-IAKPTLGPSRfPDFLDIVRRQLRTEYQ 371
Cdd:PRK11636 199 IAGLPKAPSTFNPLYSMDRAVARRNVVLSRMLDEGYITQAQYDQARSEPIVAnYHAPEIAFSA-PYLSEMVRQEMYNRYG 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 372 EGDLTNqGLRIFTTL-------------------------------------DPIAQTKIQDSFK----------ATVNR 404
Cdd:PRK11636 278 ENAYED-GYRVYTTItrkvqqaaqqavrnnvldydmrhgyrgpanvlwkvgeSAWDNKKITDTLKalptygpllpAVVTS 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 405 ---------LSRGSN--------------RLKELQGAV----------------------------------LVA-HPEN 426
Cdd:PRK11636 357 anpqeatamLADGSSvalpmegvrwarpyRSDTQQGPTprkvtdvvqtgqqiwvrqvddawwlaqvpdvnsaLVSiNPQN 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 427 GELVAAVGSTqDF--TGFNRALDAKRQVGSLLKPVIYLSAIQSGrYNWASPVEDSSISI--QSNGQSWTPKNYSGGEHGV 502
Cdd:PRK11636 437 GAVMALVGGF-DFnqSKFNRATQALRQVGSNIKPFLYTAAMDKG-LTLASMLNDVPISRwdAGAGSDWRPKNSPPQYAGP 514
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 503 VPMVQALSHSYNLSSVRLGQEFGLSTFSNHLKRFGVTS-NIPSYPSIFLGAVDMSPMEVLGIYGNFATGGFKYPTKAIRT 581
Cdd:PRK11636 515 IRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAqNIVHTESLALGSASFTPMQVARGYAVMANGGFLVDPYFISK 594
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 582 VVDQNGRLLTR---------------YG--------------------------------------LNVQQTIDPSSAYV 608
Cdd:PRK11636 595 IENDQGGVIFEakpkvacpecdipviYGdtqksnvlenddvenvatsqeqqnssvpmpqleqanqaLVAQNGAQEYAPHV 674
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 609 LNYGLQQVMTS-------------GTGRSAYNTLPTSlKLAGKSGTTNDTRDSWFAGYSGNYVSVVWLGLDDNKQT-GLT 674
Cdd:PRK11636 675 INTPLAFLIKSalntnifgepgwmGTGWRAGRDLKRR-DIGGKTGTTNSSKDAWFSGYGPGVVTSVWIGFDDHRRDlGRT 753
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1191971857 675 GSSGAL---------------PVWTNVM-SQLRQKPVN-LRQPDDVQWHWIDSGSGYLAAQG 719
Cdd:PRK11636 754 TASGAIkdqisgyeggaksaqPAWDDYMkAALEGVPEQpLTPPPGIVTVNIDRSTGKLANGG 815
|
|
| PRK11240 |
PRK11240 |
penicillin-binding protein 1C; Provisional |
157-703 |
1.14e-45 |
|
penicillin-binding protein 1C; Provisional
Pssm-ID: 183049 [Multi-domain] Cd Length: 772 Bit Score: 175.66 E-value: 1.14e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 157 RVLIKLDKVPKPLIEALIATEDRNFYSHHGISIRGTARAIVSNVTGGK-RQGGSTLTQQLVKnfYLTPE-KTIKRKVNEA 234
Cdd:PRK11240 62 RYPVTIEDVSPRYLEALINYEDRWFWKHPGVNPFSVARAAWQDLTSGRvISGGSTLTMQVAR--LLDPHpRTFGGKIRQL 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 235 FMALLVELHYNKDEILEAYLNEVNLGQngnySINGYGLASQFYFGMPLRELNIAQQAYLVGLVQGPTLYNPWRNPEAAKK 314
Cdd:PRK11240 140 WRALQLEWHLSKREILTLYLNRAPFGG----TLQGIGAASWAYLGKSPANLSYAEAALLAVLPQAPSRLRPDRWPERAEA 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 315 RRDIVLHNMLVMGYLTQEQyeTETARPLNVIAKPTLGPSRFPDFldiVRRQLRTEYQEgdltnqglRIFTTLDPIAQTKI 394
Cdd:PRK11240 216 ARNKVLERMAEQGVWSAEQ--VKESREEPVWLAPRQMPQLAPLF---ARMMLGKSKSD--------KIVTTLDAGLQRRL 282
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 395 QDSFKATVNRLSRGSNrlkelqGAVLVAHPENGELVAAVGSTqDFTGFNR-----ALDAKRQVGSLLKPVIYLSAIQSGR 469
Cdd:PRK11240 283 EDLALNWKGRLPPRSS------LAMIVVDHTDMAVRGWVGSV-DLNDDSRfghvdMVNAIRSPGSVLKPFVYGLALDDGL 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 470 YNWASPVEDssisIQSNGQSWTPKNYSGGEHGVVPMVQALSHSYNLSSVRLGQEFGLSTFSNHLKRFGVTSNIP--SYP- 546
Cdd:PRK11240 356 IHPASLLQD----VPRRTGDYRPGNFDSGFHGPVSMSEALVRSLNLPAVQVLEAYGPKRFAAKLRNVGLPLYLPagAEPn 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 547 -SIFLGAVDMSPMEVLGIYGNFATGGfkyptKAIRTVVDQNGRLLTRyglnvqQTIDPSSAYVlnygLQQVMtSGTGRS- 624
Cdd:PRK11240 432 lSLILGGAGARLEDMVAAYSAFARHG-----KAAKLRLQPDDPLLER------PLMSPGAAWI----IRRIM-ADEAQPl 495
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 625 AYNTLPTSLKLAGKSGTTNDTRDSWFAGYSGNYVSVVWLGLDDNKQT-GLTGSSGALPVWTNV----MSQLRQK----PV 695
Cdd:PRK11240 496 PDAALPRVVPLAWKTGTSYGYRDAWAIGVNARYVIGIWTGRPDGTPVvGQFGFASAVPLLNQVnnllLSRSSQRganlPE 575
|
....*...
gi 1191971857 696 NLRqPDDV 703
Cdd:PRK11240 576 DPR-PASV 582
|
|
| PRK13481 |
PRK13481 |
glycosyltransferase; Provisional |
163-336 |
1.95e-35 |
|
glycosyltransferase; Provisional
Pssm-ID: 184078 [Multi-domain] Cd Length: 232 Bit Score: 134.16 E-value: 1.95e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 163 DKVPKPLIEALIATEDRNFYSHHGISIRGTARAIVSNVTGGKRQGGSTLTQQLVKNFYLTPEKTIKRKVNEAFMALLVEL 242
Cdd:PRK13481 51 DNMPEYVKGAFISMEDERFYKHHGFDLKGTTRALFSTISDRDVQGGSTITQQVVKNYFYDNERSFTRKVKELFVAHRVEK 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 243 HYNKDEILEAYLNEVNLGQNgNYSINGyglASQFYFG---------MPlrELNIAQQAYLVGLVQGPTLYNPWRNPEAAK 313
Cdd:PRK13481 131 QYSKNEILSFYLNNIYFGDN-QYTLEG---AANHYFGttvnknsttMS--HITVLQSAILASKVNAPSVYNINDMSENFT 204
|
170 180
....*....|....*....|...
gi 1191971857 314 KRRDIVLHNMLVMGYLTQEQYET 336
Cdd:PRK13481 205 QRVSTNLEKMKQQNYINETQYQQ 227
|
|
| mono_pep_trsgly |
TIGR02070 |
monofunctional biosynthetic peptidoglycan transglycosylase; This family is one of the ... |
162-332 |
1.38e-28 |
|
monofunctional biosynthetic peptidoglycan transglycosylase; This family is one of the transglycosylases involved in the late stages of peptidoglycan biosynthesis. Members tend to be small, about 240 amino acids in length, and consist almost entirely of a domain described by pfam00912 for transglycosylases. Species with this protein will have several other transglycosylases as well. All species with this protein are Proteobacteria that produce murein (peptidoglycan). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 273951 [Multi-domain] Cd Length: 224 Bit Score: 114.48 E-value: 1.38e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 162 LDKVPKPLIEALIATEDRNFYSHHGISIRGTARAIVSNVTGGKR-QGGSTLTQQLVKNFYLTPEKTIKRKVNEAFMALLV 240
Cdd:TIGR02070 60 YDQISPNLKRAVIASEDAKFVEHHGFDWEAIQDALEKNEKSGKVvRGGSTISQQLAKNLFLWSGRSYLRKGLEAWATWML 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 241 ELHYNKDEILEAYLNEVNLGqNGNYsinGYGLASQFYFGMPLRELNIAQQAYLVGLVQGPTLYNPWRNPEAAKKRRDIVL 320
Cdd:TIGR02070 140 ETWWSKQRILEVYLNSVEWG-NGVF---GAEAAARYYFKRSASNLTRGQAARLAAVLPNPKYYDENRPGPYVRRKATWIL 215
|
170
....*....|..
gi 1191971857 321 HNmlvMGYLTQE 332
Cdd:TIGR02070 216 KQ---MGYLGLP 224
|
|
| Transpeptidase |
pfam00905 |
Penicillin binding protein transpeptidase domain; The active site serine is conserved in all ... |
417-687 |
2.34e-22 |
|
Penicillin binding protein transpeptidase domain; The active site serine is conserved in all members of this family.
Pssm-ID: 425939 [Multi-domain] Cd Length: 296 Bit Score: 98.26 E-value: 2.34e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 417 GAVLVAHPENGELVAAVGS-TQDFTGF-----NRALDAKRQVGSLLKPVIYLSAIQSGRYNWASPVEDSSISIQsNGQSW 490
Cdd:pfam00905 1 GSAVVLDPKTGEVLAMVGKpSYDPNGFigplrNRAVTSRYEPGSTFKPFTALAALDNGVLKPDETIFDWPGKQQ-GGKSI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 491 tpKNYSGGEHGVVPMVQALSHSYNLSSVRLGQEFGLSTFSNHLKRFGV------------TSNIPSY-----PSIFLGAV 553
Cdd:pfam00905 80 --GDWNQDQVGIGTLRQALEYSSNWYMQKLAQKLGADKLRSYLKKFGYgnktgiglpgenAGYLTPYwlegaTASFGIGL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 554 DMSPMEVLGIYGNFATGGFKYPTKAIRTVVDQNGRLLTRyglnvQQTIDPSSAYVLNYGLQQVMTSGTGRSAYNTLPtsL 633
Cdd:pfam00905 158 TITPLQQAQAYAAIANGGKLVPPHLVKSIEDKVDPKVLN-----KLPISKSTAEKVKDMLRLVVNDGTGTGTAAVPG--Y 230
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1191971857 634 KLAGKSGTT-----------NDTRDSWFAGY--SGNYVSVVWLGLDDNKqtGLTGSSGALPVWTNVM 687
Cdd:pfam00905 231 KVAGKTGTAqvagpkgggyyDGAQIGWFVGYapADNPKYAFAVLIDDPK--RYYGGKVAAPIFKDIL 295
|
|
| UB2H |
pfam14814 |
Bifunctional transglycosylase second domain; UB2H is the second domain of the ... |
59-141 |
5.66e-22 |
|
Bifunctional transglycosylase second domain; UB2H is the second domain of the transglycosylases, or penicillin-binding proteins PBP1bs)), the multi-domain membrane proteins essential for cell wall synthesis that are targeted by penicillin antibiotics. The exact function of the UB2H domain is uncertain, but it may act as the binding component of PBP1b with different binding partners, or it may participate in the regulation between DNA repair and/or synthesis and cell wall formation during the bacterial cell cycle.
Pssm-ID: 434234 [Multi-domain] Cd Length: 85 Bit Score: 90.69 E-value: 5.66e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 59 YTNAPISQADFTQELKLLGYKSSENYTKSGNYVSSGNELYVHTRGFDFGDSVEPEQVLKVTFADEQVSEVSATKP-SSTG 137
Cdd:pfam14814 2 YPGQALSAAQLEQELKLLGYRKVSNPTRPGEYSVSGNRIELYRRGFDFPDGAEPARRVRLRFAGGRVARLQDLDTgRDLA 81
|
....
gi 1191971857 138 IARL 141
Cdd:pfam14814 82 LVRL 85
|
|
| FtsI |
COG0768 |
Cell division protein FtsI/penicillin-binding protein 2 [Cell cycle control, cell division, ... |
379-690 |
1.10e-17 |
|
Cell division protein FtsI/penicillin-binding protein 2 [Cell cycle control, cell division, chromosome partitioning, Cell wall/membrane/envelope biogenesis];
Pssm-ID: 223839 [Multi-domain] Cd Length: 599 Bit Score: 87.46 E-value: 1.10e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 379 GLRIFTTLDPIAQTKIQDSFKATVNrlsrgsNRLKelQGAVLVAHPENGElVAAVGSTQDF--TGFNRALDAKRQV---- 452
Cdd:COG0768 238 GKDVQLTIDLRLQKAAEEALDKAVA------NKAK--GGAAVVLDPKTGE-ILAMASSPSYdpNLFVSSKDYDKPRkpll 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 453 ----------GSLLKPVIYLSAIQSGRYNwaspVEDSSISIQSNGQSWTPKNYSGGEHG--VVPMVQALSHSYNLSSVRL 520
Cdd:COG0768 309 nravtgtyepGSTFKPITAAAALETGNTG----LFDPGSVLDGNGPKIRIWGRTGHDYGgrPLTLTEALQKSSNVGFAKL 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 521 GQEFGLSTFSNHLKRFGV------------TSNIPSYPSIFLGAVD-----------MSPMEVLGIYGNFATGGFKYPTK 577
Cdd:COG0768 385 ALRLGPDGLYDYLKKFGFgqktgidlpgetSGLLPSREPWRWGPIDlatlsigqgllVTPLQLAQAYATIANGGKLVKPH 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 578 AIRTVVDQNGRLLTRYGLNVQQTIDPSSAYVLNYGLQQVMTSGTGRSAYNTLPTSLKLAGKSGTT-----------NDTR 646
Cdd:COG0768 465 LVKGIEDPVGENKKEPPVLKKRVISPETAEKVREGMRAVVNDGGGGTGKAAAVPGYRIAGKTGTAqkagpggggysKGRY 544
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 1191971857 647 DSWFAGY----SGNYVSVVwlGLDDNKqtGLTGSSGALPVWTNVMSQL 690
Cdd:COG0768 545 HAWFVGFapadNPKYAVAV--LVDNPG--GGYGGAVAAPVFKKIMERL 588
|
|
| pbp2_mrdA |
TIGR03423 |
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 ... |
410-687 |
3.44e-17 |
|
penicillin-binding protein 2; Members of this protein family are penicillin-binding protein 2 (PBP-2), a protein whose gene (designated pbpA or mrdA) generally is found next to the gene for RodA, a protein required for rod (bacillus) shape in many bacteria. PBP-2 acts as a transpeptidase for cell elongation (hence, rod-shape). [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
Pssm-ID: 274573 [Multi-domain] Cd Length: 592 Bit Score: 85.65 E-value: 3.44e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 410 NRLKELQGAVLVAHPENGELVAAVgSTQDF------TG-----------------FNRALDAKRQVGSLLKPVIYLSAIQ 466
Cdd:TIGR03423 242 KALGGRRGAVVVMDPRTGEILAMV-STPSFdpnlfvDGisskdykallndpdrplLNRAIQGVYPPGSTFKPVVALAALE 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 467 SGRYNWASPVEDSSiSIQSNGQSWtpKNYSGGEHGVVPMVQALSHSYNLSSVRLGQEFGLSTFSNHLKRFG--------- 537
Cdd:TIGR03423 321 EGVITPETRIYCPG-YFQLGGRRF--RCWKRGGHGRVDLRKAIEESCDVYFYQLALRLGIDKIAEYAKRFGfgqktgidl 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 538 ---VTSNIPS------------YP------SIFLGAVDMSPMEVLGIYGNFATGGFKYPTKAIRTVVDQNGRLLTRYGLN 596
Cdd:TIGR03423 398 pgeKSGLVPSrewkrkrfgqpwYPgdtlnvSIGQGYVLVTPLQLAVATAALANGGKLYKPHLVKSIEDPDGGVVRRTEPE 477
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1191971857 597 VQQTIDPSSAY--VLNYGLQQVMTS--GTGRSAYntLPTSLKLAGKSGT-----------------TNDTRD-SWFAGYs 654
Cdd:TIGR03423 478 VLRPLPISPENldVVREGMRDVVNGpgGTARRAR--LGLPYKMAGKTGTaqvvslkqgekydaeqiPERLRDhALFVAF- 554
|
330 340 350
....*....|....*....|....*....|....*....
gi 1191971857 655 GNY------VSVVWlglddnkQTGLTGSSGALPVWTNVM 687
Cdd:TIGR03423 555 APYdnpkiaVAVIV-------EHGGGGSSAAAPIARKIM 586
|
|
|