|
Name |
Accession |
Description |
Interval |
E-value |
| DAP2 |
COG1506 |
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism]; |
481-731 |
1.94e-52 |
|
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
Pssm-ID: 441115 [Multi-domain] Cd Length: 234 Bit Score: 181.37 E-value: 1.94e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 481 GLDFEAILLqpgSPPDKTQVPMVVMPHGGPHSSFvTAWMLFPAMLCKMGFAVLLVNYRGstgFGQDSilslpGNVGHQDV 560
Cdd:COG1506 7 GTTLPGWLY---LPADGKKYPVVVYVHGGPGSRD-DSFLPLAQALASRGYAVLAPDYRG---YGESA-----GDWGGDEV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 561 KDVQFAVEQVLQEEHFDASHVALMGGSHGGFISCHLIGQYPETYRACVARNPVINIASMLGSTDipDWCVVEAGFPFSsd 640
Cdd:COG1506 75 DDVLAAIDYLAARPYVDPDRIGIYGHSYGGYMALLAAARHPDRFKAAVALAGVSDLRSYYGTTR--EYTERLMGGPWE-- 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 641 clpdlsvWAEMLDK-SPIRYIPQVKTPLLLMLGQEDRRVPFKQGMEYYRALKTRNVPVRLLLYPKSTHALSevEVESDSF 719
Cdd:COG1506 151 -------DPEAYAArSPLAYADKLKTPLLLIHGEADDRVPPEQAERLYEALKKAGKPVELLVYPGEGHGFS--GAGAPDY 221
|
250
....*....|...
gi 12804773 720 MNAVL-WLRTHLG 731
Cdd:COG1506 222 LERILdFLDRHLK 234
|
|
| APEH_N |
pfam19283 |
Acylamino-acid-releasing enzyme, N-terminal domain; This entry represents the N-terminal ... |
86-285 |
4.43e-33 |
|
Acylamino-acid-releasing enzyme, N-terminal domain; This entry represents the N-terminal region from the Acylamino-acid-releasing enzyme (EC:3.4.19.1). The protein is involved in removing the N-acetyl or N-formyl amino acid from the N-terminus of a polypeptide. This domain does not represent the catalytic domain which is found at the C-terminus of these proteins.
Pssm-ID: 466026 Cd Length: 274 Bit Score: 128.53 E-value: 4.43e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 86 VETRGELLSRESPSGTMKAVLRKAGGTGPGEekqfLEVWEKNRKLKSFNLSAlEKHGPVYEDDCFGCLSWSHSETHLLYV 165
Cdd:pfam19283 77 IEMTGVSLIVPSPSGSKLLVVRNPENDSPTK----LEIWGSSQLEKEFHIPQ-SVHGSVYTDGWFEGISWNSDETLIAYV 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 166 AEKKRPKAESFFQTKALDVSASDDEIARLKkpdqaIKGDqfvFYEDWGENMVSKSIPVLCVLDVESGNISVLEGVPENVS 245
Cdd:pfam19283 152 AEEPSPSKPTFGDLGYKKGGSSEKDCGSWK-----GQGD---WEEDWGETYAGKRQPALFVIDINSGEVQAVKGIPKSLS 223
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 12804773 246 PGQAFWAP----GDAGVVFVGWWHEPFRLGIRFCTNRRSALYYV 285
Cdd:pfam19283 224 VGQVVWAPssegSDQYLVFVGWSSDPRKLGIKYCYNRPCALYAV 267
|
|
| Peptidase_S9 |
pfam00326 |
Prolyl oligopeptidase family; |
510-732 |
1.22e-31 |
|
Prolyl oligopeptidase family;
Pssm-ID: 459761 [Multi-domain] Cd Length: 213 Bit Score: 122.72 E-value: 1.22e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 510 PHSSFVTAWmlfpamLCKMGFAVLLVNYRGSTGFGQDSILSLPGNVGHQDVKDVQFAVEQVLQEEHFDASHVALMGGSHG 589
Cdd:pfam00326 1 PSFSWNAQL------LADRGYVVAIANGRGSGGYGEAFHDAGKGDLGQNEFDDFIAAAEYLIEQGYTDPDRLAIWGGSYG 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 590 GFISCHLIGQYPETYRACVARNPVINIASMLGSTDIP---DWCvveaGFPFSSDclpDLSVWAEMLDKSPIRYIPQvKTP 666
Cdd:pfam00326 75 GYLTGAALNQRPDLFKAAVAHVPVVDWLAYMSDTSLPfteRYM----EWGNPWD---NEEGYDYLSPYSPADNVKV-YPP 146
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 12804773 667 LLLMLGQEDRRVPFKQGMEYYRALKTRNVPVRLLLYPKSTHALSeveveSDSFMNAVL-----WLRTHLGS 732
Cdd:pfam00326 147 LLLIHGLLDDRVPPWQSLKLVAALQRKGVPFLLLIFPDEGHGIG-----KPRNKVEEYarelaFLLEYLGG 212
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
277-410 |
1.85e-06 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 48.51 E-value: 1.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 277 NRRSALYYVDLIGGKCELLSDDSLAVSSPRLSPDQCRIVYLQYpslipHHQCSQLCLYDwytkvtsvVVDVVPRQLGenF 356
Cdd:COG0823 8 DGNSDIYVVDLDGGEPRRLTNSPGIDTSPAWSPDGRRIAFTSD-----RGGGPQIYVVD--------ADGGEPRRLT--F 72
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 12804773 357 SGIYCSLlplGCWSADSQRVVFDSAQRSRQDLFAVDTQVGTVTSLTAGGSGGSW 410
Cdd:COG0823 73 GGGYNAS---PSWSPDGKRLAFVSRSDGRFDIYVLDLDGGAPRRLTDGPGSPSW 123
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| DAP2 |
COG1506 |
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism]; |
481-731 |
1.94e-52 |
|
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
Pssm-ID: 441115 [Multi-domain] Cd Length: 234 Bit Score: 181.37 E-value: 1.94e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 481 GLDFEAILLqpgSPPDKTQVPMVVMPHGGPHSSFvTAWMLFPAMLCKMGFAVLLVNYRGstgFGQDSilslpGNVGHQDV 560
Cdd:COG1506 7 GTTLPGWLY---LPADGKKYPVVVYVHGGPGSRD-DSFLPLAQALASRGYAVLAPDYRG---YGESA-----GDWGGDEV 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 561 KDVQFAVEQVLQEEHFDASHVALMGGSHGGFISCHLIGQYPETYRACVARNPVINIASMLGSTDipDWCVVEAGFPFSsd 640
Cdd:COG1506 75 DDVLAAIDYLAARPYVDPDRIGIYGHSYGGYMALLAAARHPDRFKAAVALAGVSDLRSYYGTTR--EYTERLMGGPWE-- 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 641 clpdlsvWAEMLDK-SPIRYIPQVKTPLLLMLGQEDRRVPFKQGMEYYRALKTRNVPVRLLLYPKSTHALSevEVESDSF 719
Cdd:COG1506 151 -------DPEAYAArSPLAYADKLKTPLLLIHGEADDRVPPEQAERLYEALKKAGKPVELLVYPGEGHGFS--GAGAPDY 221
|
250
....*....|...
gi 12804773 720 MNAVL-WLRTHLG 731
Cdd:COG1506 222 LERILdFLDRHLK 234
|
|
| APEH_N |
pfam19283 |
Acylamino-acid-releasing enzyme, N-terminal domain; This entry represents the N-terminal ... |
86-285 |
4.43e-33 |
|
Acylamino-acid-releasing enzyme, N-terminal domain; This entry represents the N-terminal region from the Acylamino-acid-releasing enzyme (EC:3.4.19.1). The protein is involved in removing the N-acetyl or N-formyl amino acid from the N-terminus of a polypeptide. This domain does not represent the catalytic domain which is found at the C-terminus of these proteins.
Pssm-ID: 466026 Cd Length: 274 Bit Score: 128.53 E-value: 4.43e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 86 VETRGELLSRESPSGTMKAVLRKAGGTGPGEekqfLEVWEKNRKLKSFNLSAlEKHGPVYEDDCFGCLSWSHSETHLLYV 165
Cdd:pfam19283 77 IEMTGVSLIVPSPSGSKLLVVRNPENDSPTK----LEIWGSSQLEKEFHIPQ-SVHGSVYTDGWFEGISWNSDETLIAYV 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 166 AEKKRPKAESFFQTKALDVSASDDEIARLKkpdqaIKGDqfvFYEDWGENMVSKSIPVLCVLDVESGNISVLEGVPENVS 245
Cdd:pfam19283 152 AEEPSPSKPTFGDLGYKKGGSSEKDCGSWK-----GQGD---WEEDWGETYAGKRQPALFVIDINSGEVQAVKGIPKSLS 223
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 12804773 246 PGQAFWAP----GDAGVVFVGWWHEPFRLGIRFCTNRRSALYYV 285
Cdd:pfam19283 224 VGQVVWAPssegSDQYLVFVGWSSDPRKLGIKYCYNRPCALYAV 267
|
|
| Peptidase_S9 |
pfam00326 |
Prolyl oligopeptidase family; |
510-732 |
1.22e-31 |
|
Prolyl oligopeptidase family;
Pssm-ID: 459761 [Multi-domain] Cd Length: 213 Bit Score: 122.72 E-value: 1.22e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 510 PHSSFVTAWmlfpamLCKMGFAVLLVNYRGSTGFGQDSILSLPGNVGHQDVKDVQFAVEQVLQEEHFDASHVALMGGSHG 589
Cdd:pfam00326 1 PSFSWNAQL------LADRGYVVAIANGRGSGGYGEAFHDAGKGDLGQNEFDDFIAAAEYLIEQGYTDPDRLAIWGGSYG 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 590 GFISCHLIGQYPETYRACVARNPVINIASMLGSTDIP---DWCvveaGFPFSSDclpDLSVWAEMLDKSPIRYIPQvKTP 666
Cdd:pfam00326 75 GYLTGAALNQRPDLFKAAVAHVPVVDWLAYMSDTSLPfteRYM----EWGNPWD---NEEGYDYLSPYSPADNVKV-YPP 146
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 12804773 667 LLLMLGQEDRRVPFKQGMEYYRALKTRNVPVRLLLYPKSTHALSeveveSDSFMNAVL-----WLRTHLGS 732
Cdd:pfam00326 147 LLLIHGLLDDRVPPWQSLKLVAALQRKGVPFLLLIFPDEGHGIG-----KPRNKVEEYarelaFLLEYLGG 212
|
|
| FrsA |
COG1073 |
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; ... |
470-730 |
5.60e-16 |
|
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms];
Pssm-ID: 440691 [Multi-domain] Cd Length: 253 Bit Score: 78.42 E-value: 5.60e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 470 PPPEQENVQYA---GLDFEAILLQPGSPPDKTqvPMVVMPHGGphSSFVTAWMLFPAMLCKMGFAVLLVNYRG---STGF 543
Cdd:COG1073 6 DKVNKEDVTFKsrdGIKLAGDLYLPAGASKKY--PAVVVAHGN--GGVKEQRALYAQRLAELGFNVLAFDYRGygeSEGE 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 544 gqdsilslPGNVGHQDVKDVQFAVEQVLQEEHFDASHVALMGGSHGGFISCHLIGQYPEtYRACVARNPVINIASMLGST 623
Cdd:COG1073 82 --------PREEGSPERRDARAAVDYLRTLPGVDPERIGLLGISLGGGYALNAAATDPR-VKAVILDSPFTSLEDLAAQR 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 624 DIPDWCVVEAGFPFssdcLPDLSvWAEMLDK--SPIRYIPQVKTPLLLMLGQEDRRVPFKQGMEYYRALKTrnvPVRLLL 701
Cdd:COG1073 153 AKEARGAYLPGVPY----LPNVR-LASLLNDefDPLAKIEKISRPLLFIHGEKDEAVPFYMSEDLYEAAAE---PKELLI 224
|
250 260
....*....|....*....|....*....
gi 12804773 702 YPKSTHALSEVEVESDSFMNAVLWLRTHL 730
Cdd:COG1073 225 VPGAGHVDLYDRPEEEYFDKLAEFFKKNL 253
|
|
| DLH |
COG0412 |
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism]; |
475-708 |
6.78e-15 |
|
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 440181 [Multi-domain] Cd Length: 226 Bit Score: 74.62 E-value: 6.78e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 475 ENVQYA---GLDFEAILLQPgspPDKTQVPMVVMPHGgphsSF-VTAWMLFPA-MLCKMGFAVLLVN--YRGSTGFGQDS 547
Cdd:COG0412 4 ETVTIPtpdGVTLPGYLARP---AGGGPRPGVVVLHE----IFgLNPHIRDVArRLAAAGYVVLAPDlyGRGGPGDDPDE 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 548 ILSLPGNVG-HQDVKDVQFAVEQVLQEEHFDASHVALMGGSHGGFISCHLIGQYPEtYRACVARNPViniasmlgstdip 626
Cdd:COG0412 77 ARALMGALDpELLAADLRAALDWLKAQPEVDAGRVGVVGFCFGGGLALLAAARGPD-LAAAVSFYGG------------- 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 627 dwcvveagfpfssdclpdlsvwaeMLDKSPIRYIPQVKTPLLLMLGQEDRRVPFKQGMEYYRALKTRNVPVRLLLYPKST 706
Cdd:COG0412 143 ------------------------LPADDLLDLAARIKAPVLLLYGEKDPLVPPEQVAALEAALAAAGVDVELHVYPGAG 198
|
..
gi 12804773 707 HA 708
Cdd:COG0412 199 HG 200
|
|
| PldB |
COG2267 |
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism]; |
494-727 |
6.54e-13 |
|
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];
Pssm-ID: 441868 [Multi-domain] Cd Length: 221 Bit Score: 68.49 E-value: 6.54e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 494 PPDKTQVPMVVMPHG-GPHSSfvtAWMLFPAMLCKMGFAVLLVNYRGstgFGQDsilslPGNVGHQD-----VKDVQFAV 567
Cdd:COG2267 22 RPAGSPRGTVVLVHGlGEHSG---RYAELAEALAAAGYAVLAFDLRG---HGRS-----DGPRGHVDsfddyVDDLRAAL 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 568 EQVLQEEHfdaSHVALMGGSHGGFISCHLIGQYPETYRACVArnpviniasmLGSTDIPDwcvveagfpfsSDCLPDLSV 647
Cdd:COG2267 91 DALRARPG---LPVVLLGHSMGGLIALLYAARYPDRVAGLVL----------LAPAYRAD-----------PLLGPSARW 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 648 WAEMLdksPIRYIPQVKTPLLLMLGQEDRRVPFKQGMEYYRALKTRnvpVRLLLYPKSTHALSeVEVESDSFMNAVL-WL 726
Cdd:COG2267 147 LRALR---LAEALARIDVPVLVLHGGADRVVPPEAARRLAARLSPD---VELVLLPGARHELL-NEPAREEVLAAILaWL 219
|
.
gi 12804773 727 R 727
Cdd:COG2267 220 E 220
|
|
| Aes |
COG0657 |
Acetyl esterase/lipase [Lipid transport and metabolism]; |
494-731 |
1.20e-10 |
|
Acetyl esterase/lipase [Lipid transport and metabolism];
Pssm-ID: 440422 [Multi-domain] Cd Length: 207 Bit Score: 61.81 E-value: 1.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 494 PPDKTQVPMVVMPHGGphsSFV-----TAWMLFPAMLCKMGFAVLLVNYRgstgfgqdsilsLPGNVGHQD-VKDVQFAV 567
Cdd:COG0657 7 AGAKGPLPVVVYFHGG---GWVsgskdTHDPLARRLAARAGAAVVSVDYR------------LAPEHPFPAaLEDAYAAL 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 568 EQVLQ---EEHFDASHVALMGGSHGGFISCHLigqypeTYRACVARNP----VINIASMLgstdipdwcvveagfpfssd 640
Cdd:COG0657 72 RWLRAnaaELGIDPDRIAVAGDSAGGHLAAAL------ALRARDRGGPrpaaQVLIYPVL-------------------- 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 641 clpDLSVwaemldkSPIRYipQVKT--PLLLMLGQEDRRVPfkQGMEYYRALKTRNVPVRLLLYPKSTHA---LSEVEVE 715
Cdd:COG0657 126 ---DLTA-------SPLRA--DLAGlpPTLIVTGEADPLVD--ESEALAAALRAAGVPVELHVYPGGGHGfglLAGLPEA 191
|
250
....*....|....*.
gi 12804773 716 SDSFMNAVLWLRTHLG 731
Cdd:COG0657 192 RAALAEIAAFLRRALA 207
|
|
| MenH |
COG0596 |
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, ... |
501-709 |
2.80e-09 |
|
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold is part of the Pathway/BioSystem: Menaquinone biosynthesis
Pssm-ID: 440361 [Multi-domain] Cd Length: 221 Bit Score: 58.09 E-value: 2.80e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 501 PMVVMPHGGPHSSFVtaWMLFPAMLCKmGFAVLLVNYRGstgFGQDSILSLPGNVGHQdVKDVqfavEQVLqeEHFDASH 580
Cdd:COG0596 24 PPVVLLHGLPGSSYE--WRPLIPALAA-GYRVIAPDLRG---HGRSDKPAGGYTLDDL-ADDL----AALL--DALGLER 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 581 VALMGGSHGGFISCHLIGQYPETYRACVARNPVI-NIASMLGSTDIPDWCVVEAgfpfssdclpdlsvWAEMLDKSPIRY 659
Cdd:COG0596 91 VVLVGHSMGGMVALELAARHPERVAGLVLVDEVLaALAEPLRRPGLAPEALAAL--------------LRALARTDLRER 156
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 12804773 660 IPQVKTPLLLMLGQEDRRVPFKQGMEYYRALKTrnvpVRLLLYPKSTHAL 709
Cdd:COG0596 157 LARITVPTLVIWGEKDPIVPPALARRLAELLPN----AELVVLPGAGHFP 202
|
|
| YpfH |
COG0400 |
Predicted esterase [General function prediction only]; |
550-731 |
4.88e-09 |
|
Predicted esterase [General function prediction only];
Pssm-ID: 440169 [Multi-domain] Cd Length: 200 Bit Score: 56.84 E-value: 4.88e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 550 SLPGNVGHQDVKDVQFA-------VEQVLQEEHFDASHVALMGGSHGGFISCHLIGQYPETYRACVArnpviniasmlgs 622
Cdd:COG0400 53 DLSFLEGREDEEGLAAAaealaafIDELEARYGIDPERIVLAGFSQGAAMALSLALRRPELLAGVVA------------- 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 623 tdipdwcvveagfpFSSDCLPDLSVWAEMLDKSpiryipqvKTPLLLMLGQEDRRVPFKQGMEYYRALKTRNVPVRLLLY 702
Cdd:COG0400 120 --------------LSGYLPGEEALPAPEAALA--------GTPVFLAHGTQDPVIPVERAREAAEALEAAGADVTYREY 177
|
170 180
....*....|....*....|....*....
gi 12804773 703 PkSTHALSEVEVESdsfmnAVLWLRTHLG 731
Cdd:COG0400 178 P-GGHEISPEELAD-----ARAWLAERLA 200
|
|
| Hydrolase_4 |
pfam12146 |
Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is ... |
493-709 |
5.42e-08 |
|
Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.
Pssm-ID: 463473 [Multi-domain] Cd Length: 238 Bit Score: 54.53 E-value: 5.42e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 493 SPPDKTqvpmVVMPHG-GPHSSF---VTAWmlfpamLCKMGFAVLLVNYRGstgFGQdsilSlPGNVGHQD-----VKDV 563
Cdd:pfam12146 1 GEPRAV----VVLVHGlGEHSGRyahLADA------LAAQGFAVYAYDHRG---HGR----S-DGKRGHVPsfddyVDDL 62
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 564 QFAVEQVLQEEHFDAshVALMGGSHGGFISCHLIGQYPETYRACVARNPVINIASMLgstdIPDWCVVEAgfPFSSDCLP 643
Cdd:pfam12146 63 DTFVDKIREEHPGLP--LFLLGHSMGGLIAALYALRYPDKVDGLILSAPALKIKPYL----APPILKLLA--KLLGKLFP 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 644 DLSVWAEMLDKSPIRYI-----------------------------------PQVKTPLLLMLGQEDRRVPFKQGMEYYR 688
Cdd:pfam12146 135 RLRVPNNLLPDSLSRDPevvaayaadplvhggisartlyelldagerllrraAAITVPLLLLHGGADRVVDPAGSREFYE 214
|
250 260
....*....|....*....|.
gi 12804773 689 ALKTRNvpVRLLLYPKSTHAL 709
Cdd:pfam12146 215 RAGSTD--KTLKLYPGLYHEL 233
|
|
| Abhydrolase_1 |
pfam00561 |
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes. |
501-613 |
6.68e-08 |
|
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.
Pssm-ID: 395444 [Multi-domain] Cd Length: 245 Bit Score: 54.05 E-value: 6.68e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 501 PMVVMPHGGPHSSFVtaWM-LFPAmLCKMGFAVLLVNYRGstgFGQDSILSLPGNVGHQDVKDVqfaVEQVLqeEHFDAS 579
Cdd:pfam00561 1 PPVLLLHGLPGSSDL--WRkLAPA-LARDGFRVIALDLRG---FGKSSRPKAQDDYRTDDLAED---LEYIL--EALGLE 69
|
90 100 110
....*....|....*....|....*....|....
gi 12804773 580 HVALMGGSHGGFISCHLIGQYPETYRACVARNPV 613
Cdd:pfam00561 70 KVNLVGHSMGGLIALAYAAKYPDRVKALVLLGAL 103
|
|
| BD-FAE |
pfam20434 |
BD-FAE; This family represents a novel bifunctional feruloyl and acetyl xylan esterase (BD-FAE, ... |
494-690 |
9.29e-08 |
|
BD-FAE; This family represents a novel bifunctional feruloyl and acetyl xylan esterase (BD-FAE, previously known as bifunctional carbohydrate esterase (CE)), which is active on complex natural xylans and was identified as the basis of a monophyletic clade gathering all homologs identified in PULs (polysaccharide utilization loci) predicted to act on xylan. It adopts an alpha-beta-hydrolase fold with the catalytic triad Ser-Asp-His. This new family of proteins is a new candidate for biomass processing due to its capacity to remove ferulic acid and acetic acid from natural corn and birchwood xylan substrates.
Pssm-ID: 466583 [Multi-domain] Cd Length: 215 Bit Score: 53.34 E-value: 9.29e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 494 PPD-KTQVPMVVMPHGGphssfvtAWML------------FPAMLCKMGFAVLLVNYRGSTgfgqDSILslPGNVghQDV 560
Cdd:pfam20434 6 PKNaKGPYPVVIWIHGG-------GWNSgdkeadmgfmtnTVKALLKAGYAVASINYRLST----DAKF--PAQI--QDV 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 561 KDvqfAVEQVLQ---EEHFDASHVALMGGSHGGfiscHL----------------IGQYPET-------YRACVARNPVI 614
Cdd:pfam20434 71 KA---AIRFLRAnaaKYGIDTNKIALMGFSAGG----HLallaglsnnnkefegnVGDYTPEsskesfkVNAVVDFYGPT 143
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 12804773 615 NIASMLGSTDIPDWCVVEA---GFPFSSDclPDLsvwAEMLdkSPIRYIPQVKTPLLLMLGQEDRRVPFKQGMEYYRAL 690
Cdd:pfam20434 144 DLLDMDSCGTHNDAKSPETlllGAPPLEN--PDL---AKSA--SPITYVDKNDPPFLIIHGDKDPLVPYCQSVLLHEKL 215
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
277-410 |
1.85e-06 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 48.51 E-value: 1.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 277 NRRSALYYVDLIGGKCELLSDDSLAVSSPRLSPDQCRIVYLQYpslipHHQCSQLCLYDwytkvtsvVVDVVPRQLGenF 356
Cdd:COG0823 8 DGNSDIYVVDLDGGEPRRLTNSPGIDTSPAWSPDGRRIAFTSD-----RGGGPQIYVVD--------ADGGEPRRLT--F 72
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 12804773 357 SGIYCSLlplGCWSADSQRVVFDSAQRSRQDLFAVDTQVGTVTSLTAGGSGGSW 410
Cdd:COG0823 73 GGGYNAS---PSWSPDGKRLAFVSRSDGRFDIYVLDLDGGAPRRLTDGPGSPSW 123
|
|
| TolB |
COG0823 |
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, ... |
226-404 |
5.92e-06 |
|
Periplasmic component TolB of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440585 [Multi-domain] Cd Length: 158 Bit Score: 46.97 E-value: 5.92e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 226 VLDVESGNISVL-EGVPENVSPgqaFWAPGDAGVVFVgwwhepfrlgirfcTNR--RSALYYVDLIGGKCELLSDDSLAV 302
Cdd:COG0823 15 VVDLDGGEPRRLtNSPGIDTSP---AWSPDGRRIAFT--------------SDRggGPQIYVVDADGGEPRRLTFGGGYN 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 303 SSPRLSPDQCRIVYLQYPSliphhQCSQLCLYDWYTKvtsvvvdvVPRQLGENFSGiycsllplGCWSADSQRVVFDSAQ 382
Cdd:COG0823 78 ASPSWSPDGKRLAFVSRSD-----GRFDIYVLDLDGG--------APRRLTDGPGS--------PSWSPDGRRIVFSSDR 136
|
170 180
....*....|....*....|..
gi 12804773 383 RSRQDLFAVDTQvGTVTSLTAG 404
Cdd:COG0823 137 GGRPDLYVVDLD-GRKRRLTPA 157
|
|
| Axe1 |
COG3458 |
Cephalosporin-C deacetylase or related acetyl esterase [Secondary metabolites biosynthesis, ... |
477-593 |
1.34e-05 |
|
Cephalosporin-C deacetylase or related acetyl esterase [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 442681 [Multi-domain] Cd Length: 318 Bit Score: 47.88 E-value: 1.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 477 VQYAGLD---FEAILLQP-GSPPdktqVPMVVMPHG-GPHSSFVTAWMLFPAMlckmGFAVLLVNYRG---STGFGQDSI 548
Cdd:COG3458 59 VTFTGFGgarIYGWLLRPkGEGP----LPAVVEFHGyGGGRGLPHEDLDWAAA----GYAVLVMDTRGqgsSWGDTPDPG 130
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 12804773 549 LSLPGNV-GHQ----DVKD-----------VQfAVEQVLQEEHFDASHVALMGGSHGGFIS 593
Cdd:COG3458 131 GYSGGALpGYMtrgiDDPDtyyyrrvyldaVR-AVDALRSLPEVDGKRIGVTGGSQGGGLA 190
|
|
| COG4188 |
COG4188 |
Predicted dienelactone hydrolase [General function prediction only]; |
490-707 |
4.27e-05 |
|
Predicted dienelactone hydrolase [General function prediction only];
Pssm-ID: 443342 [Multi-domain] Cd Length: 326 Bit Score: 46.25 E-value: 4.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 490 QPGSPPDKTQVPMVVMPHGGPHSSFVTAWMLfpAMLCKMGFAVLLVNYRGSTGFGQDSILSLPGNVGH-----QDVKDVQ 564
Cdd:COG4188 52 APADAPAGGPFPLVVLSHGLGGSREGYAYLA--EHLASHGYVVAAPDHPGSNAADLSAALDGLADALDpeelwERPLDLS 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 565 FAVEQVLQEE--------HFDASHVALMGGSHGGFISCHLIG---QYPETYRACVARNPVINIASMLG--STDIPDWCVV 631
Cdd:COG4188 130 FVLDQLLALNksdpplagRLDLDRIGVIGHSLGGYTALALAGarlDFAALRQYCGKNPDLQCRALDLPrlAYDLRDPRIK 209
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 12804773 632 eAGFPFSsdclPDLSvwaEMLDKSPIRyipQVKTPLLLMLGQEDRRVPF-KQGMEYYRALKTrnVPVRLLLYPKSTH 707
Cdd:COG4188 210 -AVVALA----PGGS---GLFGEEGLA---AITIPVLLVAGSADDVTPApDEQIRPFDLLPG--ADKYLLTLEGATH 273
|
|
| Fes |
COG2382 |
Enterochelin esterase or related enzyme [Inorganic ion transport and metabolism]; |
491-703 |
9.70e-05 |
|
Enterochelin esterase or related enzyme [Inorganic ion transport and metabolism];
Pssm-ID: 441948 [Multi-domain] Cd Length: 314 Bit Score: 45.23 E-value: 9.70e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 491 PGSPPDKTQVPMVVMPHGGP--HSSFVTAWMLFPAM--LCKMG----FAVLLVNYRGSTGFGQDsilsLPGNVGHQDvkd 562
Cdd:COG2382 103 PGYDNPGKKYPVLYLLDGGGgdEQDWFDQGRLPTILdnLIAAGkippMIVVMPDGGDGGDRGTE----GPGNDAFER--- 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 563 vqFAVEQVLQ--EEHF----DASHVALMGGSHGGFISCHLIGQYPETYRacvarnpviNIASMLGSTDIPDWcvveagfp 636
Cdd:COG2382 176 --FLAEELIPfvEKNYrvsaDPEHRAIAGLSMGGLAALYAALRHPDLFG---------YVGSFSGSFWWPPG-------- 236
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 12804773 637 fssdcLPDLSVWAEMLDKSPIRyiPQVKtpLLLMLGQEDRRVPfkQGMEYYRALKTRNVPVRLLLYP 703
Cdd:COG2382 237 -----DADRGGWAELLAAGAPK--KPLR--FYLDVGTEDDLLE--ANRALAAALKAKGYDVEYREFP 292
|
|
| LpqC |
COG3509 |
Acetyl xylan esterase AxeA and related esterases, LpqC family [Carbohydrate transport and ... |
477-690 |
3.08e-04 |
|
Acetyl xylan esterase AxeA and related esterases, LpqC family [Carbohydrate transport and metabolism];
Pssm-ID: 442732 [Multi-domain] Cd Length: 284 Bit Score: 43.45 E-value: 3.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 477 VQYAGLDFEAILLQPGSPPDKTQVPMVVMPHG--GPHSSFVTAWMlFPAMLCKMGFAVLLVNyrGSTGFGQDSILSLPGN 554
Cdd:COG3509 30 FTVGGGTRTYRLYVPAGYDGGAPLPLVVALHGcgGSAADFAAGTG-LNALADREGFIVVYPE--GTGRAPGRCWNWFDGR 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 12804773 555 VGHQDVKDVQF---AVEQVLQEEHFDASHVALMGGSHGGFISCHLIGQYPETYRAcvarnpvinIASMLGstdipdwcvV 631
Cdd:COG3509 107 DQRRGRDDVAFiaaLVDDLAARYGIDPKRVYVTGLSAGGAMAYRLACEYPDVFAA---------VAPVAG---------L 168
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 12804773 632 EAGFPFSSDCLPdlsvwaemldKSPIryipqvktPLLLMLGQEDRRVPFK---QGMEYYRAL 690
Cdd:COG3509 169 PYGAASDAACAP----------GRPV--------PVLVIHGTADPTVPYAgaeETLAQWAAL 212
|
|
| DLH |
pfam01738 |
Dienelactone hydrolase family; |
654-708 |
3.24e-04 |
|
Dienelactone hydrolase family;
Pssm-ID: 396343 [Multi-domain] Cd Length: 213 Bit Score: 42.72 E-value: 3.24e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 12804773 654 KSPIRYIPQVKTPLLLMLGQEDRRVPFKQGMEYYRALKTRNVPVRLLLYPKSTHA 708
Cdd:pfam01738 132 EPPLIEAPDIKAPILFHFGEEDHFVPADSRELIEEALKAANVDHQIHSYPGAGHA 186
|
|
| |
