|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
1-446 |
5.11e-164 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 469.25 E-value: 5.11e-164
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 1 MLKFIFMLMFMFPLSFLKNFYWTVQNLIFLLTFMFMINLSSLNYFNYISYYFGLDMVSYGLILLSFWICGLMLMASEKVF 80
Cdd:MTH00163 1 MLKFLFMLLFLIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWICMLMILSSESVY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 81 STNNYEKLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLLASLPLLIGIFY 160
Cdd:MTH00163 81 KKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFY 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 161 ILNSKNTLSFTLLLNYSFSNFnLLYLSLVFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRMFSLLQ 240
Cdd:MTH00163 161 LYNNSGSLSFFLLNFFGSLNF-LWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFS 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 241 ISGVKYNYWWISISLVGGVLISLVCLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLAN 320
Cdd:MTH00163 240 KLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLAN 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 321 ISYERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPPTLNLLGEISLLNSIVSWSWITMIMLSFLSFFSAAYSLYLF 400
Cdd:MTH00163 320 IIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSFFSAAYSLYLY 399
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 1382878761 401 AYSQHGKIYSGVYFFSVGTTREFLLLMLHWLPLNLLILKSNFCMLW 446
Cdd:MTH00163 400 SYSQHGKYYSGLYSCSSGKVREYLLLFLHWLPLNLLILKSDLFMLW 445
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
34-447 |
3.88e-123 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 364.16 E-value: 3.88e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 34 MFMINLSSLNYFNYiSYYFGLDMVSYGLILLSFWICGLMLMASEKVFSTNNYEKLFVFMILFLLFMLVLTFSSMSVFMFY 113
Cdd:MTH00150 3 LLLLYSSFSSYESL-SELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLVLLLCLILVLAFSVSSLLMFY 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 114 LFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTLSFTLL--LNYSFSNFNLLYLSLVFA 191
Cdd:MTH00150 82 FFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLIssLRKLLSSMGLWGLLVFLA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 192 FLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRMFSLLQISGVKYNYWWISISLVGGVLISLVCLRQTDL 271
Cdd:MTH00150 162 FLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDV 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 272 KALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSLWWFLL 351
Cdd:MTH00150 242 KSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLF 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 352 CSGNMAAPPTLNLLGEISLLNSIVSWSWITMIMLSFLSFFSAAYSLYLFAYSQHGKIYSGVYFFSVGTTREFLLLMLHWL 431
Cdd:MTH00150 322 CIINMAAPPSLNLLSEIMIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEMLLLLLHWV 401
|
410
....*....|....*.
gi 1382878761 432 PLNLLILKSNFCMLWI 447
Cdd:MTH00150 402 PLLLLILKSDLLFMWI 417
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
1-444 |
3.32e-118 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 352.74 E-value: 3.32e-118
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 1 MLKFIFMLMFMFPLSFLKNFYWTVQNLIFLLTFMFMINL-SSLNYFNYISYYFGLDMVSYGLILLSFWICGLMLMASEKV 79
Cdd:MTH00205 1 MSIFGVFSLLIILFVLKFKDWSFFSNLLLIGLFFSSFFFsNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 80 FSTNNYEKLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLLASLPLLIGIF 159
Cdd:MTH00205 81 FKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 160 YILNSKNTLSFTLLLNYSFSNF--NLLYLSLVFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRMFS 237
Cdd:MTH00205 161 FLNSLNFSLSMFFNFPLNFSDFylFLYWIFLMLAFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 238 LLQISGVKYNYWWISISLVGGVLISLVCLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFC 317
Cdd:MTH00205 241 MLYKLNSNFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 318 LANISYERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPPTLNLLGEISLLNSIVSWSWITMIMLSFLSFFSAAYSL 397
Cdd:MTH00205 321 LANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEILLIMSLLSSSKISGIPLSLISFLSGAYSL 400
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 1382878761 398 YLFAYSQHGKIYSGVYFFSVGTTREFLLLMLHWLPLNLLILKSNFCM 444
Cdd:MTH00205 401 YLYSQSQHGKVSSQISSFLAISEREYYILILHWFPLNILILKLKIFI 447
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
1-439 |
5.88e-116 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 347.18 E-value: 5.88e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 1 MLKFIFMLMFMFPLSFL--KNFYWTVqnlifLLTFMFMINLSSLNYFN-------YISYYFGLDMVSYGLILLSFWICGL 71
Cdd:MTH00124 1 MLKIILPTIMLIPTTLLskPKFLWTN-----TTTYSLLIALLSLQWLKppyyptkNLTQWLGIDQISAPLLVLSCWLLPL 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 72 MLMASEKVFSTN--NYEKLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLL 149
Cdd:MTH00124 76 MILASQNHLQHEplQRKRTFLTTLILLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLI 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 150 ASLPLLIGIFYILNSKNTLSFTLL------LNYSFSNfNLLYLSLVFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGI 223
Cdd:MTH00124 156 SSLPLLIAILYLHNQTGTLSLPMLqlthptLTNSWTN-LLLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAI 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 224 LLKLGGYGLLRMFSLLQISGVKYNYWWISISLVGGVLISLVCLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYA 303
Cdd:MTH00124 235 LLKLGGYGIIRITLLLPPLSNTLHYPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMI 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 304 LMIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPPTLNLLGEISLLNSIVSWSWITMI 383
Cdd:MTH00124 315 LMIAHGLTSSMLFCLANTNYERTHSRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTII 394
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 1382878761 384 MLSFLSFFSAAYSLYLFAYSQHGKIYSGVYFFSVGTTREFLLLMLHWLPLNLLILK 439
Cdd:MTH00124 395 LTGLATLITASYTLYMFLSTQRGTLPTHITTIQPTHTREHLLMTLHIIPLLLLILK 450
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
1-447 |
4.73e-115 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 344.80 E-value: 4.73e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 1 MLKFIFMLMFMFPLSFLKNFYWTVQ--NLIFLLTFMFMINLSSLNYFNYI-SYYFGLDMVSYGLILLSFWICGLMLMASE 77
Cdd:MTH00014 1 MLKLIMPLISLLLLPLIKYPWSWALtfSTLLLLSLFTLLNLYPMSAPYSMfTESLSSDMLSAPLITLTLWITALMILASF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 78 KVFSTNNYEKLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLLASLPLLIG 157
Cdd:MTH00014 81 KIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 158 IFYILNSKNTLSFtLLLNYSFSN---FNLLYLSLVFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLR 234
Cdd:MTH00014 161 ILLIFYTNNSLSM-LMSSMEPPSiylMNLWWLITILAFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLR 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 235 MFSLLQISGVKYNYWWISISLVGGVLISLVCLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSG 314
Cdd:MTH00014 240 MSSLFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSA 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 315 LFCLANISYERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPPTLNLLGEISLLNSIVSWSWITMIMLSFLSFFSAA 394
Cdd:MTH00014 320 LFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSINLLSEIMLLTSILSSSLSTAILLAITSFLAAA 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|...
gi 1382878761 395 YSLYLFAYSQHGKIYSGVYFFSVGTTREFLLLMLHWLPLNLLILKSNFCMLWI 447
Cdd:MTH00014 400 YSLFLYTSTQHGSPPSFMNPLNLFTPRNHTLMTLHLVPLFILILKPDLITNWL 452
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
1-439 |
5.25e-106 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 321.87 E-value: 5.25e-106
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 1 MLKFIFMLMFMFPLSFLKNFYW-----TVQNLIFLLTFMFMINLSSlNYFNYISYYFGLDMVSYGLILLSFWICGLMLMA 75
Cdd:MTH00068 1 MLKIIIPTLMLLPTTWLSPKKWlwtltTTNSLIIAFLSLMWFNLPS-ETMNFTNKYFGIDQISSPLLILTCWLLPLMILA 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 76 SEKVFSTN--NYEKLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLLASLP 153
Cdd:MTH00068 80 SQNHLKNEpiNRQRTYISMLIILQLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLP 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 154 LLIGIFYILNSKNTLSFTLLLNYSFSNFN-----LLYLSLVFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLG 228
Cdd:MTH00068 160 LLIALLILQNSLGSLSLILLELMSPMQLMtytnkIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 229 GYGLLRMFSLLQISGVKYNYWWISISLVGGVLISLVCLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAH 308
Cdd:MTH00068 240 GYGILRISILLTPLSKELSYPFIILALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISH 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 309 GLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPPTLNLLGEISLLNSIVSWSWITMIMLSFL 388
Cdd:MTH00068 320 GLTSSALFCLANTNYERTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLG 399
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1382878761 389 SFFSAAYSLYLFAYSQHGKIYSGVYFFSVGTTREFLLLMLHWLPLNLLILK 439
Cdd:MTH00068 400 TLITAAYTLYMFLMTQRGPLPNHLKTLFPTYTREHLLLALHILPMLLLILK 450
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
1-445 |
1.66e-103 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 315.38 E-value: 1.66e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 1 MLKFIFMLMFMFPLSFL--KNFYWTVQNLIFLLTFMFMINLSSLNY---FNYISYYFGLDMVSYGLILLSFWICGLMLMA 75
Cdd:MTH00044 1 MITLILLSLGIAITSWIvpKNKLWPISISQSSLISLLSLFLLNNHWsssWHNLSLSLATDSLSSPLIILSCWLAPLSLLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 76 SEKVFSTN--NYEKLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLLASLP 153
Cdd:MTH00044 81 SINHLSNNspNNQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 154 LLIGIFYILNSKNTLSFTL-----LLNYSFSNFNLLYLSLVFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLG 228
Cdd:MTH00044 161 LLISLIAIYSSSSSLSIPLselnwLTSLSSNSSSIWWIFCILAFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 229 GYGLLRMFSLLQISGVKY-NYWWISISLVGGVLISLVCLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIA 307
Cdd:MTH00044 241 GYGLIRLINLFSLPSANNiSFILIVFCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIA 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 308 HGLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPPTLNLLGEISLLNSIVSWSWITMIMLSF 387
Cdd:MTH00044 321 HGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIISWSILSFPIIGL 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 1382878761 388 LSFFSAAYSLYLFAYSQHGKIYSGVYFFSVGTTREFLLLMLHWLPLNLLILKSNFCML 445
Cdd:MTH00044 401 ATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSREHLLIFLHLLPLILIIINPNIILI 458
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
1-407 |
2.00e-103 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 315.29 E-value: 2.00e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 1 MLKFIFMLMFMFPLSFLKNFYWTVQNLIfllTFMFMINLSSLNYFNYI-------SYYFGLDMVSYGLILLSFWICGLML 73
Cdd:MTH00110 1 MLKIIIPTIMLIPLTWLSKNNMIWINTT---TYSLLISLISLLLLNQPndnslnfSLLFFSDSLSTPLLILTTWLLPLML 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 74 MASEKVFS--TNNYEKLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLLAS 151
Cdd:MTH00110 78 MASQHHLSkePLTRKKLYITMLILLQLFLIMTFTATELIMFYILFEATLIPTLIIITRWGNQTERLNAGLYFLFYTLVGS 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 152 LPLLIGIFYILNSKNTLSFTLL------LNYSFSNfNLLYLSLVFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILL 225
Cdd:MTH00110 158 LPLLVALLYIQNNLGSLNFLLLqlwaqpLPNSWSN-NLLWLACMMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILL 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 226 KLGGYGLLRMFSLLQISGVKYNYWWISISLVGGVLISLVCLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALM 305
Cdd:MTH00110 237 KLGGYGMMRITIILNPLTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVIVAILIQTPWSFMGATALM 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 306 IAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPPTLNLLGEISLLNSIVSWSWITMIML 385
Cdd:MTH00110 317 IAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLALPPTINLIGELFVIMSSFSWSNITIILM 396
|
410 420
....*....|....*....|..
gi 1382878761 386 SFLSFFSAAYSLYLFAYSQHGK 407
Cdd:MTH00110 397 GLNMLITALYSLYMLITTQRGK 418
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
1-443 |
4.65e-97 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 298.78 E-value: 4.65e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 1 MLKFIFMLMFMFPLSFLKNFYWTVQNLIFLLTFMFMINL--SSLNYFNYISYYFGLDMVSYGLILLSFWICGLMLMASEK 78
Cdd:MTH00206 2 ILIPLIMLLLMTILSKKKWLWRSTTFFSFLIALLFLLWFkwSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 79 VFSTN--NYEKLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLLASLPLLI 156
Cdd:MTH00206 82 HMKNEpiNRQRIYITLLIVLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLI 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 157 GIFYILNSKNTLSFTLLLNYSFSNF--NLLYLSLVFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLR 234
Cdd:MTH00206 162 ALLFLQNSLGSLSLYILYFSKLTTWnnNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMR 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 235 MFSLLQISGVKYNYWWISISLVGGVLISLVCLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSG 314
Cdd:MTH00206 242 IILILGPSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSA 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 315 LFCLANISYERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPPTLNLLGEISLLNSIVSWSWITMIMLSFLSFFSAA 394
Cdd:MTH00206 322 LFCLANLLYERSHTRTILGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAI 401
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1382878761 395 YSLYLFAYSQHGKIYSGVYFFSVGTTREFLLLMLHWLPLNLLILKSNFC 443
Cdd:MTH00206 402 YSLYMFVMTQHGKTPNHLLSLSPSSTREHLLLFLHLFPVILLILNPNLI 450
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
1-439 |
1.43e-89 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 279.92 E-value: 1.43e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 1 MLKFIFMLMFMFPLSFLKNFYW-----TVQNLIFLLTFMFMINLSSLNYFNYISYYFGLDMVSYGLILLSFWICGLMLMA 75
Cdd:MTH00127 1 MLKILIPTLMLIPTTWLTPAKWlwtttLAHSLLIALASLTWLKNLSETGWSSLNLYMATDPLSTPLLVLTCWLLPLMILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 76 SEKVFSTN--NYEKLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLLASLP 153
Cdd:MTH00127 81 SQNHTAPEpiNRQRMYITLLTSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 154 LLIGIFYILNSKNTLS-----FTLLLNYSFSNFNLLYLSLVFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLG 228
Cdd:MTH00127 161 LLVALLLLQNSTGTLSmltlqYSQPLQLSSWADKLWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 229 GYGLLRMFSLLQISGVKYNYWWISISLVGGVLISLVCLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAH 308
Cdd:MTH00127 241 GYGMMRMMVMLDPLTKELSYPFIILALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAH 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 309 GLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPPTLNLLGEISLLNSIVSWSWITMIMLSFL 388
Cdd:MTH00127 321 GLTSSALFCLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLG 400
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 1382878761 389 SFFSAAYSLYLFAYSQHGKIYSGVYFFSVGTTREFLLLMLHWLPLNLLILK 439
Cdd:MTH00127 401 TLITAGYSLYMFLMTQRGPLPDHIIALNPSHTREHLLMALHLLPLLLLILK 451
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
106-389 |
8.57e-66 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 212.56 E-value: 8.57e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 106 SMSVFMFYLFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTLSFTLLLNY-----SFSN 180
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKAltgglNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 181 FNLLYLSLVFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRMFSLLQISGVKYNYWWISISLVGGVL 260
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 261 ISLVCLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLA-NISYERMGSRSLLINKGLLN 339
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAK 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1382878761 340 FMPTLSLWWFLLCSGNMAAPPTLNLLGEISLLNSIVSWSWITMIMLSFLS 389
Cdd:pfam00361 241 TMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVG 290
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
48-400 |
1.16e-61 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 207.63 E-value: 1.16e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 48 ISYYFGLDMVSYGLILLSFWICGLMLMASEKvfSTNNYEKLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTLFLI 127
Cdd:COG1008 74 ISYHLGVDGISLPLVLLTALLTPLAILASWN--EIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 128 LGWGYqPERLQAGVYLLFYTLLASLPLLIGIFYI--LNSKNTLSFTLLLNYSFSNF--NLLYLSLVFAFLVKMPMFLVHL 203
Cdd:COG1008 152 GIWGG-ERRIYAAIKFFLYTLAGSLLMLVAILALyfLAGALTFDIAELAAAPLPLTaqLLLFLAFFIAFAVKVPMFPFHT 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 204 WLPKAHVEAPVSGSMILAGILLKLGGYGLLR-MFSLLQISGVKYNYWWISISLVGGVLISLVCLRQTDLKALIAYSSVAH 282
Cdd:COG1008 231 WLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRfALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSH 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 283 MGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPPTL 362
Cdd:COG1008 311 MGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTS 390
|
330 340 350
....*....|....*....|....*....|....*...
gi 1382878761 363 NLLGEISLLNSIVSWSWITMIMLSFLSFFSAAYSLYLF 400
Cdd:COG1008 391 GFVGEFLVLLGAFQVNPWLAILAALGLILTAAYLLWMY 428
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
48-400 |
3.71e-57 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 196.19 E-value: 3.71e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 48 ISYYFGLDMVSYGLILLSFWICGLMLMASEKVFStnNYEKLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTLFLI 127
Cdd:PRK05846 74 ISYHLGVDGISLLLVVLTALLTPLAVLASWEEIK--KRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLI 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 128 LGWGYqPERLQAGVYLLFYTLLASLPLLIGIFYI----LNSKNTLSFTLLLNYSFSNF--NLLYLSLVFAFLVKMPMFLV 201
Cdd:PRK05846 152 GVWGG-KNRIYAATKFFLYTLLGSLLMLVAIIYLvvvyYNATGTFDIADLLNLPLPPGvqYWLFLAFFIAFAVKMPMFPL 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 202 HLWLPKAHVEAPVSGSMILAGILLKLGGYGLLR-MFSLLQISGVKYNYWWISISLVGGVLISLVCLRQTDLKALIAYSSV 280
Cdd:PRK05846 231 HTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRfSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSI 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 281 AHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPP 360
Cdd:PRK05846 311 SHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPG 390
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1382878761 361 TLNLLGEISLLNSIVSWSWITMIMLSFLSFFSAAYSLYLF 400
Cdd:PRK05846 391 TSGFVGEFLILLGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
48-400 |
6.06e-53 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 184.37 E-value: 6.06e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 48 ISYYFGLDMVSYGLILLSFWICGLMLMASEKvfSTNNYEKLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTLFLI 127
Cdd:TIGR01972 69 ISYHLGVDGISLLLVLLTALLTLLAILASWE--SIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 128 LGWGyQPERLQAGVYLLFYTLLASLPLLIGIFYiLNSKNTLSFTLL----LNYSFSNFNLLYLSLVFAFLVKMPMFLVHL 203
Cdd:TIGR01972 147 GVWG-GPNRIYAAMKFFLYTLAGSLLMLLAILG-LYFLGGGTFDLLellnLPLPFGVQTWLFLAFFIAFAVKVPLFPLHT 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 204 WLPKAHVEAPVSGSMILAGILLKLGGYGLLRM-FSLLQISGVKYNYWWISISLVGGVLISLVCLRQTDLKALIAYSSVAH 282
Cdd:TIGR01972 225 WLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFnLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISH 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 283 MGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPPTL 362
Cdd:TIGR01972 305 MGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTS 384
|
330 340 350
....*....|....*....|....*....|....*...
gi 1382878761 363 NLLGEISLLNSIVSWSWITMIMLSFLSFFSAAYSLYLF 400
Cdd:TIGR01972 385 GFVGEFLILLGSFKVNPVVAFLAALGIVLAAAYMLTLY 422
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
38-400 |
3.01e-52 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 182.57 E-value: 3.01e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 38 NLSSLNYFNYISYYFGLDMVSYGLILLSFWICGLMLMASEKvfSTNNYEKLFVFMILFLLFMLVLTFSSMSVFMFYLFFE 117
Cdd:MTH00204 65 IISPTLNFQWGPLVFAVDGVSLFFILLTTLLIPICILISWK--SIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFE 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 118 ASLIPTLFLILGWGYQPERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTLSFTLLLN--YSFSNFNLLYLSLVFAFLVK 195
Cdd:MTH00204 143 GILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNikLPLSIQKWLLVGFFLSLAVK 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 196 MPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRM-FSLLQISGVKYNYWWISISLVGGVLISLVCLRQTDLKAL 274
Cdd:MTH00204 223 IPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFsWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRL 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 275 IAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSLWWFLLCSG 354
Cdd:MTH00204 303 IAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLA 382
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1382878761 355 NMAAPPTLNLLGEISLLNSIVSWSWITMIMLSFLSFFSAAYSLYLF 400
Cdd:MTH00204 383 NMGFPLSCNFVGEFFSLLAAFEYSLGLGVLVTSGMVWSAAYSLYLY 428
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
87-400 |
8.98e-47 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 167.92 E-value: 8.98e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 87 KLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPtLFLILG-WGYQPERLQAGVYLLFYTLLASLPLLIGIFYILNSK 165
Cdd:MTH00217 109 KEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIP-MFLIIGiWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYA 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 166 NTLSFTLLLNYSFSNF--NLLYLSLVFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRM-FSLLQIS 242
Cdd:MTH00217 188 GTTDYQALCCLKIEKElqYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFsWPLLPEA 267
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 243 GVKYNYWWISISLVGGVLISLVCLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANIS 322
Cdd:MTH00217 268 SEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFL 347
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1382878761 323 YERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPPTLNLLGEISLLNSIVSWSWITMIMLSFLSFFSAAYSLYLF 400
Cdd:MTH00217 348 YERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEYSYIVGVLASLGMVLSAGYSIYLY 425
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
52-399 |
1.04e-43 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 160.09 E-value: 1.04e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 52 FGLDMVSYGLILLSFWICGLMLMASEKvfSTNNYEKLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPtLFLILG-W 130
Cdd:MTH00226 98 FAVDGISIYFIILTGFIVPCSILISWH--SVKYLTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIP-MYLILGiW 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 131 GYQPERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTLSFTLLLNYSF----SNFNLLYLSLVFAFLVKMPMFLVHLWLP 206
Cdd:MTH00226 175 GSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLASCSHvvseQTQKWIFLGIFLAMAVKIPIFPFHIWLP 254
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 207 KAHVEAPVSGSMILAGILLKLGGYGLLRM-FSLLQISGVKYNYWWISISLVGGVLISLVCLRQTDLKALIAYSSVAHMGI 285
Cdd:MTH00226 255 KAHVEAPVAGSVLLAGILLKLGGYGLVRLsWPILPLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGL 334
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 286 VLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPPTLNLL 365
Cdd:MTH00226 335 VSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFI 414
|
330 340 350
....*....|....*....|....*....|....
gi 1382878761 366 GEISLLNSIVSWSWITMIMLSFLSFFSAAYSLYL 399
Cdd:MTH00226 415 GEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYF 448
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
19-418 |
1.66e-37 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 141.20 E-value: 1.66e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 19 NFYWTVQNLIFLLTFMFMINLSSLNYFNYISYYFGLDMVSYGLILLSFWICGLMLMasekvfstNNYEKLFVFMILFLLF 98
Cdd:MTH00094 2 SLLFFFSPFLFFLFLMFFSFLMFNNYSWSGLFFFFDSFVFVLLIFMMVFILGLVLL--------SEKNFNLLILSNLLIL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 99 MLVLTFSSMSVFMFYLFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTLSFTLLLNYsf 178
Cdd:MTH00094 74 ICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCYFDFFLSW-- 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 179 snfnLLYLSLVFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRMFSLLQIsgvKYNYWWISISLVGG 258
Cdd:MTH00094 152 ----EMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNF---VYNNFWIIFSLLGM 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 259 VLISLVCLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYERMGSRSLLINKGLL 338
Cdd:MTH00094 225 ILSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFF 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 339 NFMPTLSLWWFLLCSGNMAAPPTLNLLGEISLLNSIVSWSWITMIMLSFLSFFSAAYSLYLFAYSQHGKIYSGVYFFSVG 418
Cdd:MTH00094 305 SSSMFFGLIFSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFNVG 384
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-342 |
1.16e-32 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 129.38 E-value: 1.16e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 53 GLDMVSYGLILLSFWICGLMLMASEKVfstNNYEKLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTLFLILGWGY 132
Cdd:PRK12561 56 GVDGLSMPLVLLSGLITTLSIFASWKV---TRKPRLFYFLMLVLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 133 QpERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTLSFTL----LLNYSFSNFNLLYLSLVFAFLVKMPMFLVHLWLPKA 208
Cdd:PRK12561 133 Q-KRLYAATKFILYTALASIFILVAGLALALSGDTFTFDLaelgAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDA 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 209 HVEAPVSGSMILAGILLKLGGYGLLRM-FSLLQISGVKYNYWWISISLVGGVLISLVCLRQTDLKALIAYSSVAHMGIVL 287
Cdd:PRK12561 212 HGEASAPVSMILAGVLLKMGGYALIRFnVQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVL 291
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1382878761 288 SGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMP 342
Cdd:PRK12561 292 LGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTLSIPNMGGLAKVMP 346
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
52-404 |
2.56e-32 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 127.19 E-value: 2.56e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 52 FGLDMVSYGLILLSFWICGLMLMASEKVFSTNNYEKLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTLFLILGWG 131
Cdd:COG0651 72 LVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGG 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 132 YqPERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTLSFTLL----LNYSFSNFNLLYLSLVFAFLVKMPMFLVHLWLPK 207
Cdd:COG0651 152 T-KEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLaarlAELDPGLLLAAFALLLVGFGIKAALFPLHFWLPD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 208 AHVEAPVSGSMILAGILLKLGGYGLLRMFSLL--QISGVKYNYWWISISLVGGVLISLVCLRQTDLKALIAYSSVAHMGI 285
Cdd:COG0651 231 AYPAAPSPVSALLSGLLTKVGVYAILRVLTLLfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGY 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 286 VLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPPTLNLL 365
Cdd:COG0651 311 ILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFV 390
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1382878761 366 GEISLLNSIV-SWSWITMIMLSFLSFFSAAYSLYLFAYSQ 404
Cdd:COG0651 391 SKWLLLQAALeAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
52-342 |
1.99e-26 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 111.19 E-value: 1.99e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 52 FGLDMVSYGLILLSFWICGLMLMASEKVfsTNNYeKLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTLFLILGWG 131
Cdd:CHL00011 80 LGIDGLSIGPILLTGFITTLATLAAWPV--TRNS-RLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWG 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 132 YQpERLQAGVYLLFYTLLASLPLLIGIFYI-LNSKN--TLSFTLLLN--YSFSNFNLLYLSLVFAFLVKMPMFLVHLWLP 206
Cdd:CHL00011 157 GK-KRLYSATKFILYTAGGSIFLLIGVLGMgLYGSNepTLNFETLANqsYPVALEILFYIGFLIAYAVKLPIIPLHTWLP 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 207 KAHVEAPVSGSMILAGILLKLGGYGLLRM-FSLLQISGVKYNYWWISISLVGGVLISLVCLRQTDLKALIAYSSVAHMGI 285
Cdd:CHL00011 236 DTHGEAHYSTCMLLAGILLKMGAYGLIRInMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGF 315
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 1382878761 286 VLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMP 342
Cdd:CHL00011 316 IIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMP 372
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
48-369 |
1.07e-25 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 109.40 E-value: 1.07e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 48 ISYYFGLDMVSYGLILLSFWICGLMLMASEKvfsTNNYEKLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTLFLI 127
Cdd:PRK06473 71 LSYHLGVDGLSLPLLVLNSLLTLIAIYSSDE---SIQRPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 128 LGWGYQpERLQAGVYLLFYTLLASLPLLIGIFYI--LNSKNTLSFTLLLNYSF--SNFNLLYLSLVFAFLVKMPMFLVHL 203
Cdd:PRK06473 148 AIWGGQ-RRGYAATKFLLYTAISGILILVSFLGLvwLSGASSFDYEPLRSHTLplSTQLLLLAPILVGFGIKIPLVPFHT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 204 WLPKAHVEAPVSGSMILAGILLKLGGYGLLRMFSLLQISGVKYNYWWISISLVGGVLISLVC-LRQTDLKALIAYSSVAH 282
Cdd:PRK06473 227 WLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGASCaIAQKDMKKMVAYSSIGH 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 283 MGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPPTL 362
Cdd:PRK06473 307 MGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLNPERGLPITGSLMILGVMASAGIP 386
|
....*..
gi 1382878761 363 NLLGEIS 369
Cdd:PRK06473 387 GMVGFIA 393
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
53-325 |
2.74e-25 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 108.26 E-value: 2.74e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 53 GLDMVSYGLILLSFWICGLMLMASEKVfstNNYEKLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTLFLILGWGY 132
Cdd:PRK02546 84 GADGLSMPLILLTGFITTLAVLAAWPV---TFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGG 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 133 QpERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTLSFTL----LLNYSFSNFNLLYLSLVFAFLVKMPMFLVHLWLPKA 208
Cdd:PRK02546 161 K-KRQYAATKFILYTAGSSLFILLAALAMAFYGDTPTFDMtalaAKDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDA 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 209 HVEAPVSGSMILAGILLKLGGYGLLRM-FSLLQISGVKYNYWWISISLVGGVLISLVCLRQTDLKALIAYSSVAHMGIVL 287
Cdd:PRK02546 240 HGEATAPVHMLLAGILLKMGGYALLRMnAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVL 319
|
250 260 270
....*....|....*....|....*....|....*...
gi 1382878761 288 SGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYER 325
Cdd:PRK02546 320 IGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDR 357
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
27-392 |
2.05e-18 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 86.90 E-value: 2.05e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 27 LIFLLTFMFMINLSSLNYFNYISYYFGLDMVSYGLILLSfwicgLMLMASEKVFSTNNYEKLFVFMILFLLFMLVLTFSS 106
Cdd:MTH00062 16 LLFCLLYSSGVGCCILVVNNVFNGLFIFDSLSFYLILLV-----LFLGLYSQVMFYNLLSGVSRFFLFLSLIFSILCFCV 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 107 MSVFMFYLFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTLSFtLLLNYSFSNFNLLYL 186
Cdd:MTH00062 91 NNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNF-SDWGSDDSVSLIVYY 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 187 SLVFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRMFSLLQISGVkynYWWISISLVGGVLISLVCL 266
Cdd:MTH00062 170 VLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSF---LGYLFLCCLFSVFFLITAC 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 267 RQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSL 346
Cdd:MTH00062 247 SELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRV 326
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1382878761 347 WWFLLCSGNMAAPPTLNLLGEISLLnSIVSWSWITMIMLSFLSFFS 392
Cdd:MTH00062 327 IVVFSFLSLCSFPPTIQFFCEVFLV-SSSFGVLVYLLFWCFYLFFG 371
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
48-366 |
4.05e-18 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 86.30 E-value: 4.05e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 48 ISYYFGLDMVSYGLILLSFWICGLMLMASEKvfsTNNYEKLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTLFLI 127
Cdd:PRK07363 71 LSYSLGVDGLSLPLLVLNSLLTWIAIYSIGE---NTERPRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 128 LGWGYQpERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTLSFTL----LLNYSFSNFNLLYLSLVFAFLVKMPMFLVHL 203
Cdd:PRK07363 148 AIWGGE-KRGYASIKFLIYTAVSGLLVLAAFLGIVWLSGSTSFDYdaisTQNLSLNTQLILLTGLLLGFGIKIPLVPLHT 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 204 WLPKAHVEAPVSGSMILAGILLKLGGYGLLRMFslLQISGVKYNYWWISISLVGGVLI---SLVCLRQTDLKALIAYSSV 280
Cdd:PRK07363 227 WLPDAYTEASPAVAILLGGVLAKLGTYGLLRFG--LQLFPQTWSLVAPGLAIIGTISViygALSAIAQKDIKRMVAYSSI 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 281 AHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPP 360
Cdd:PRK07363 305 GHMGYILVAAAAGTQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNPIRGLPLTSALLVLAGMASAG 384
|
....*.
gi 1382878761 361 TLNLLG 366
Cdd:PRK07363 385 IPGLVG 390
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-402 |
3.68e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 80.31 E-value: 3.68e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 52 FGLDMVSYGLILLSFWICGLMLMASEKVFSTNNYekLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTLFLIlGWG 131
Cdd:PRK08375 73 LRADSLSALFLLVTSILAIAALLYAIGYGEHRQT--RFYALFLLLLAGLLGALLTADLFNLFVFLEIMSLSSYALV-AMG 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 132 YQPERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTLSFTLLLNYSFSNFNL---LYLsLVFAFLVKMPMFLVHLWLPKA 208
Cdd:PRK08375 150 GDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENPTVvtaFGF-VLLALALKAAVFPLHTWLPRA 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 209 HVEAPVSGSMILAGILLKLGGYGLLR-MFSLLQISGVKY-NYWWI-----SISLVGGVLISLVclrQTDLKALIAYSSVA 281
Cdd:PRK08375 229 YPAAPPVVTALLSGLVTKVAVYALIRiYFTVFGGDFRFAlGLGWLlavlaLLSMLVGSLAALG---QDDVKRVLAYSTVS 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 282 HMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPPT 361
Cdd:PRK08375 306 QMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPT 385
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1382878761 362 LNLLGEISLLNSIVS-WSWITMIMLSFLSFFSAAYSLYLFAY 402
Cdd:PRK08375 386 SGFVSKWYLVVGAVEaGQWLVLAVLLASSLLALLYFLRIWYR 427
|
|
| Oxidored_q5_N |
pfam01059 |
NADH-ubiquinone oxidoreductase chain 4, amino terminus; |
1-103 |
2.97e-14 |
|
NADH-ubiquinone oxidoreductase chain 4, amino terminus;
Pssm-ID: 366442 [Multi-domain] Cd Length: 110 Bit Score: 68.71 E-value: 2.97e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 1 MLKFIFMLMFMFPLSFLKNFYW-----TVQNLIFLLTFMFMINLSSLNYFNYISYYFGLDMVSYGLILLSFWICGLMLMA 75
Cdd:pfam01059 1 MLKILLPTLMLIPLTFLSKPKWlwttsTLYSLLLALLSLLLLNNPSNFSWSNLSYFLGIDSLSYPLIILSCWLLPLMILA 80
|
90 100 110
....*....|....*....|....*....|
gi 1382878761 76 SEKVFST--NNYEKLFVFMILFLLFMLVLT 103
Cdd:pfam01059 81 SQKHLKSepNNRQRTFIFLLILLQLFLILT 110
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
91-392 |
4.37e-13 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 71.30 E-value: 4.37e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 91 FMILFLLFMLvLTFSSMSVFMFYLFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTLSF 170
Cdd:PRK08667 116 LTALFILSML-GVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFEL 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 171 TLLlNYSFSNFNLLYLSLVFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRMfsLLQISGVkyNYWW 250
Cdd:PRK08667 195 SPL-GASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRF--LMDVLSP--ELWW 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 251 ISISLVGGVLISLV----CLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALM-----------IAHGLCSSGL 315
Cdd:PRK08667 270 GVLILLAGSISALLgviyALKEHDLKGLLAYSSIENIGIILMGIGLYVIFGVYGLDTLAllalggalfhsLNHALFKSLL 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 316 FCLANISYERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPPTLNLLGEISLLNSI-----VSWSWITMIMLSFLSF 390
Cdd:PRK08667 350 FLTAGSVVHATGTRNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFfqsfsVADPLIKILLFSVLAI 429
|
..
gi 1382878761 391 FS 392
Cdd:PRK08667 430 FA 431
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
81-399 |
2.26e-11 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 65.93 E-value: 2.26e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 81 STNNYEKLFVFMILFLLFMLVLTFSSMSVFMfYLFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLLASLPLLIG--I 158
Cdd:PRK12646 105 RKDNLPRFYFYLTLFMFSMIGIVLSDNTILM-YVFWELTSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGLALLVGfiM 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 159 FYILNSKNTLSFTLLLNYSFSNfNLLYLSLVFAFLV----KMPMFLVHLWLPKAhVEAPVSGSMIL-AGILLKLGGYGLL 233
Cdd:PRK12646 184 LYIMTGTNNITEILGQADHIKN-HGLFIPMIFMFLLgaftKSAQFPFHIWLPRA-MAAPTPVSAYLhSATMVKAGIFLLF 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 234 RMFSLLQISGVkYNYWWISISLVGGVLISLVCLRQTDLKALIAYSSVAHMGIVLS--GLLTMTYWGLTGSYAL------- 304
Cdd:PRK12646 262 RFTPLLGLSNM-YIYIVTFVGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAmvGIGGGYAQHQQDAIASiyvfvlf 340
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 305 -----MIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSLwWFLLCSGNMAAPPTLN-LLGEISLLNSIVS-- 376
Cdd:PRK12646 341 aalfhLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNL-VMTIAALSMAGVPFLNgFLSKEMFLDALTQtg 419
|
330 340 350
....*....|....*....|....*....|.
gi 1382878761 377 ----WSWITMIMLSFL----SFFSAAYSLYL 399
Cdd:PRK12646 420 qlsqFSLISMIIIVFIgviaSIFTFTYALYM 450
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
12-316 |
6.54e-11 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 64.25 E-value: 6.54e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 12 FPLSFLKNFYWTVQNLIFLLTFMFMINLSSLNYFNYISYYFGLDMVSYGLILLSFWICGLMLMASekvfstnnyeklfvf 91
Cdd:PRK08668 34 LPLLFLIKLYFTLKVGTGEKLTLFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMVSEKTKNDA--------------- 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 92 miLFLLFMLVLTFSSMSVFM------FYLFFEASLIPTLFLILgWGYQPERLQAGVYLLFYTLLASLpLLIGIFYILNSK 165
Cdd:PRK08668 99 --YFNMFALMSLAGVLGVFLandlltLYIFWEIMTFSSFMMVP-MGKKESRKASLKYFVLSAIGAYA-MLYAIFLIYAKT 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 166 NTLSFT----LLLNYSFSNFNLLYLSLVFAF-LVKMPMFLVHLWLPKAHVEAPVSGSMILA---------GILLKLGGYG 231
Cdd:PRK08668 175 GTFDFAdisqGLINDTSTGFALIVFLFLLAFgVAKAGIFPLHVWAPDAYSEAPQSFSAVLSgqlsklgayGFLLVLYVLP 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 232 LLRMFS-LLQISGV-KYNYWWISISLVGGVLISLVCLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHG 309
Cdd:PRK08668 255 GTKLFSeFGTYRGVpLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFNHA 334
|
....*..
gi 1382878761 310 LCSSGLF 316
Cdd:PRK08668 335 LFKGLFF 341
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-395 |
1.40e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 63.21 E-value: 1.40e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 106 SMSVFMFYLFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLLASLPLL-IGIFYILNSKNTLSFTLLLNYSFSNFNLL 184
Cdd:PRK12662 129 SNDVFNIYVFLEISSISSYVLVAMGRDKKALVAAFEYLIIGTIGATFYLIgIGFLYAITGTLNMGDMFLIIQDLPTNRAI 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 185 YLSLVFAFL---VKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRMF-----SLLQISGVKYNYWWISISLV 256
Cdd:PRK12662 209 QIGVLFIMVglfIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVydvfkANFVFTTLPFNNVFMILAAL 288
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 257 GGVLISLVCLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYERMGSRSLLINKG 336
Cdd:PRK12662 289 AIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVNHSIVKSALFMVSGSISYHFGTTKLEDCLN 368
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 337 LLNFMPTLSLWWFLLCSGNMAAPPTLNLLGEISLLNSIV-SWSWITMIMLSFLSFFSAAY 395
Cdd:PRK12662 369 LWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIkSNAWIGLVVLLVGSGLSVIY 428
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
87-399 |
2.82e-10 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 62.08 E-value: 2.82e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 87 KLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTLFLILGWGYQpERLQAGVYLLFYTLLASLPLLIGIFYILNSKN 166
Cdd:PRK08676 102 KVFYLGFNLLLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSAR-ENIDAALKYIFIASTAMIFAFIGLIFLFSLTR 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 167 TLSFTLLLNY-------SFSNFNLLYLSLVF---AFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRMF 236
Cdd:PRK08676 181 QALGTGTLNWtelaahaSLLSPSVLGASFLFifiGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLS 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 237 SLLQISGVKYNYWWISISLvGGVLISLVC---LRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSS 313
Cdd:PRK08676 261 ALLRQSGAAEQFSNVLIGL-GIFSIAVAAfsmLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKS 339
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 314 GLFCLANISYERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPPTLNLLGEISLLNSIVSWS-WITMIMLSFLSFFS 392
Cdd:PRK08676 340 GLFFSAGILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISvWLVLAVLLLLLLAA 419
|
....*..
gi 1382878761 393 AAYSLYL 399
Cdd:PRK08676 420 SSFAIFL 426
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
109-363 |
3.25e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 62.04 E-value: 3.25e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 109 VFMFYLFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTLSFTLL-LNYSFSNFNLLYLS 187
Cdd:PRK08376 143 LFNFFVFLEIMSIASYALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYLaVKMSENPTVVAKIA 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 188 LVF---AFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRMFSLLQIS-GVKYNYWWISI----SLVGGV 259
Cdd:PRK08376 223 LALfiaGLAMKSGAVPVHMWLPDAYPAAPSSISAMLLVIKQAGLYALARVLFSIYGPAiNLATVGWVIIIlgclTMFVGV 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 260 LISLVclrQTDLKALIAYSSVAHMGIVLSGL---------LTMTYWG---LTGSYALMIAHGLCSSGLFCLANISYERMG 327
Cdd:PRK08376 303 AMAVV---QKDVKRLLAYHSVSQIGYMLLGLgvglaalgdPAMASYGeiaLAGGIYHIVNHALYKALLFLTAGAVIYETG 379
|
250 260 270
....*....|....*....|....*....|....*.
gi 1382878761 328 SRSLLINKGLLNFMPtLSLWWFLLCSGNMAAPPTLN 363
Cdd:PRK08376 380 TRNLNELGGLARTMP-KTTIAFLIGAAAIVGLPPFN 414
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
89-325 |
3.95e-10 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 61.51 E-value: 3.95e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 89 FVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTlFLILGWGYQPERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTL 168
Cdd:PRK07234 96 FYAQLLILHGSVNAAFVCADLISLYVALEVLSIAT-FLLVAYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTF 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 169 SFTLLlnysfSNFNLLYLSLVFA-FLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRMFSLLQISGVkyn 247
Cdd:PRK07234 175 AFSGL-----ATADPEAFALIALgLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDL--- 246
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1382878761 248 ywWISISLVGGVLI-SLVCLRQTDLKALIAYSSVAHMGIVLSGLLTmtywglTGSYALmiAHGLCSSGLFCLANISYER 325
Cdd:PRK07234 247 --IVRIFGVGTALLgVLFALLEKDLKRMLAFSTISQLGFILAAPLV------GGLYAL--AHGLVKSTLFLCAGALPSR 315
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
189-346 |
1.25e-09 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 59.98 E-value: 1.25e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 189 VFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRMFSLL---QISGVKYNYWWISI----SLVGGVLI 261
Cdd:PRK12667 230 LWAFTIKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIfgiSPSLIDFRAALSPIliilGAVSAIIG 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 262 SLVCLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFM 341
Cdd:PRK12667 310 ALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKM 389
|
....*
gi 1382878761 342 PTLSL 346
Cdd:PRK12667 390 PIASF 394
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
89-397 |
7.85e-09 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 58.13 E-value: 7.85e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 89 FVFMILFLLFMLVLTFSSmSVFMFYLFFEASLIPTLFLILGWGyqPERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTL 168
Cdd:PRK12650 113 YLLMTAFMAAMLLLVLAD-DVVVLFVAWELVSLASFFLIARSG--SGGEAGSIRTLILTFFGGLTLLAAVAIAATQTGTT 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 169 SFTLLLNYSFSNFNLLYLSLVfAFLV------KMPMFLVHLWLPKAHVEA-PVS-----GSMILAGillklggygllrMF 236
Cdd:PRK12650 190 SLSGILHSDVWAEKPGLTTVV-AVLIavaaftKSAQFPFHFWLPEAMAAItPVSaflhaAAVVKAG------------IY 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 237 SLLQISGVKYNY-WW----ISISLVGGVLISLVCLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHGLC 311
Cdd:PRK12650 257 LLLRFSPVFHDVaVWnwllIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALF 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 312 SSGLFCLANISYERMGSRSLLINKGLLNFMPtLSLWWFLLCSGNMAA-PPTLNLLGEISLLNSIV------SWSWITMIM 384
Cdd:PRK12650 337 KSSLFMLIGVVDHQAGTRDIRRLGSLWRRMP-FTFVSVTIAALSMAAvPPLFGFVSKEGMLTAFLeapggnAGVVLLLVG 415
|
330
....*....|...
gi 1382878761 385 LSFLSFFSAAYSL 397
Cdd:PRK12650 416 AALGAVFTFAYSA 428
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
89-400 |
9.50e-09 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 57.47 E-value: 9.50e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 89 FVFMILFLLFMLVLTFSSmSVFMFYLFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTL 168
Cdd:COG1009 114 FAYLLLFMAAMLGLVLSD-NLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTL 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 169 SFTLLLNYSFSNFNLLYLSLVFAFLV-----KMPMFLVHLWLPKAhVEAP--VS-----------GSMILAgillklggy 230
Cdd:COG1009 193 NFSELLAAAPTILSSPLLTLILLLLLlgafgKSAQFPLHFWLPDA-MEGPtpVSallhaatmvkaGVYLLA--------- 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 231 gllRMFSLLQISGVkynyWWISISLVGGV---LISLVCLRQTDLKALIAYSSVAHMGIVLSGLltmtywGLTGSYA---L 304
Cdd:COG1009 263 ---RLSPLFALSPV----WLTVVAIIGAItalFAALIALAQTDIKRVLAYSTVSQLGYMFLAL------GVGAYVAalfH 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 305 MIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMPtLSLWWFLLCSGNMAA-PPTLNLLGEISLLNSIV---SWSWI 380
Cdd:COG1009 330 LLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMP-ITAITFLIGALSLAGiPPFAGFFSKEAILEAALeagGLGPL 408
|
330 340
....*....|....*....|
gi 1382878761 381 TMIMLSFLSFFSAAYSLYLF 400
Cdd:COG1009 409 LLAVALLGAFLTAFYSFRLF 428
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
29-400 |
1.46e-08 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 56.52 E-value: 1.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 29 FLLTFMFMINLSSLNYFNYISYYFGLDMVSYgLILLSFWICGLMLMA-SEKVFSTNNYE--------KLFVFMILFLLFM 99
Cdd:PRK06525 48 FYQAGKVAVTLTLVNLGDVALFGLVIDPVSV-LIGFVVVLLGLLVTLySTGYMSPGNREhpvhegtgRYYAFLLLFIGAM 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 100 LVLTFSSmSVFMFYLFFEASLIPTLFLIlGWGYQPERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTLSFTLLLNYSFS 179
Cdd:PRK06525 127 AGLVYSS-TLLGLLLFFEITGLCSWALI-SYYQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGS 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 180 NFNLLYLSLVFAFLVKMPMFLVHLWLPKAhVEAPVSGSMIL-AGILLKLGGYGLLRMfsLLQISGVKYNYWWI-----SI 253
Cdd:PRK06525 205 LKYLVFLGILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARA--IQSMGPIPHVIGYVgavmaIV 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 254 SLVGGVLISLVclrQTDLKALIAYSSVAHMGIVLSGLLTMTY---WGLTGSYALMIAHGLCSSGLFCLAN-ISYErMGSR 329
Cdd:PRK06525 282 TLLYGFLMYLP---QQDMKRLLAYSTITQLGYMFFGLSLAILgsrLALEGSIAYIFNHAFAKSLFFLVAGaLSYS-CGTR 357
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1382878761 330 SLLINKGLLNFMPTLSLWWFLLCSGNMAAPP------TLNLLGEISLLNSIVSWSWITMIMLSFLSFFSAAYSLYLF 400
Cdd:PRK06525 358 LLPRLRGVLKKLPLVGVGFCVAALAITGVPPfngffsKFPIFAAGFELSVEYWILLPAMVLLLIESVASFAWFLRWF 434
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
186-353 |
2.06e-08 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 56.09 E-value: 2.06e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 186 LSLVFAFLV-----KMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRMFSLLQISGVKY--NYWWISISLVGG 258
Cdd:PRK06458 213 MKLAFVFLLigfgtKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRYYILIDAAIGSDfpGRLLLIFGLLSV 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 259 VLISLVCLRQTDLKALIAYSSVAHMGIVLSGLltmtywGLTGSYA------LMIAHGLCSSGLFCLANISYERMGSRSLL 332
Cdd:PRK06458 293 LVAAFFLLRQRDIKRLFAYSSIEHMGLIAFAL------GIGGPLGifaallHMLNHSLTKSAIFFASGNVLQKYGTRDIN 366
|
170 180
....*....|....*....|.
gi 1382878761 333 INKGLLNFMPTLSlWWFLLCS 353
Cdd:PRK06458 367 VIRGLLKVSPLTG-WGLMLGA 386
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
91-363 |
2.56e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 56.05 E-value: 2.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 91 FMILFLLFM-LVLTFSSMsvFMFYLFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTLS 169
Cdd:PRK06521 118 FYNLFLASMvLVLLADDA--FSFLVAWETMSLSSWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYD 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 170 FTLLLNYSFSNF--NLLYLSLVFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRM-FSLLQISGvky 246
Cdd:PRK06521 196 FAAMRAAHLSPFwaSLVFLLALFGFGAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVvFDLLGAPG--- 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 247 nYWWI-------SISLVGGVLISLVclrQTDLKALIAYSSVAHMGIVLSGL-LTMTY----------WGLTGSYALMIAH 308
Cdd:PRK06521 273 -WWWGvlvlalgAISAVLGVLYALA---EHDLKRLLAYSTIENIGIIFVGLgLAMVFiaygmpllaaLALTAALYHLLNH 348
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 1382878761 309 GLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSlWWFLLCSGNMAAPPTLN 363
Cdd:PRK06521 349 ALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTA-WAFLIGCLAISALPPLN 402
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
46-397 |
1.84e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 53.28 E-value: 1.84e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 46 NYISYYFGLDMVSYGLILLS----FWICGLMLMASEKVFSTNNYEKLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLI 121
Cdd:PRK06589 71 DFGNYSIGLHLEPLGLIFLLligfLWICALLYTPKYLAINNIDSSSRFLFFFNLTILIGVLIALSSDLFTMFVCYELLTI 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 122 PTLFLIlGWGYQPERLQAGV-YLLFYTLLASLPLLIGIFYILNSKNTLSFTLLLNYSFSNFNLLYLSLVFAfLVKMPMFL 200
Cdd:PRK06589 151 STAFLI-GHTRNNISLSGGYkYLKILMISALLLFLPAVILIYTKTGNLDFVSGGLFSKNQSIILLLMFIYG-IAKTAIFP 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 201 VHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRMfsLLQISGVKY-------NYWWISISLVGGVLISLVCLRQTDLKA 273
Cdd:PRK06589 229 VHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKI--LLYIFGLSYlqrifaeFNWLIFIPIVSIFYSSLKALKTDNIKK 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 274 LIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSLWWFLLCS 353
Cdd:PRK06589 307 ILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSIYSLKKEDQVDKLHGTSKSFPLISFIISISSL 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1382878761 354 GNMAAPPTLNLLGEISLL-----NSIVSWSWITMIMLSFLSFFSAAYSL 397
Cdd:PRK06589 387 SLIGIPIFSGFISKFLILlaaseQNQPWLSIIVMLVVIASSILSALYLL 435
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
102-366 |
3.87e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 52.28 E-value: 3.87e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 102 LTFSSMSVFMFYLFFEASLIPTlFLILGWGYQPERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTLSF----TLLLNYS 177
Cdd:PRK12665 126 NAFLAGDLFNLYVGFEILLVAS-YVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAATGTLNMadlaVRLDELP 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 178 FSNFNLLYLSLVFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRMFSLLQISGVKYNywwisISLVG 257
Cdd:PRK12665 205 SGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFPGGGLDT-----LLMVV 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 258 GVLISLV----CLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYERMGSRSLLI 333
Cdd:PRK12665 280 ALLTMVVgilgAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSSSLRR 359
|
250 260 270
....*....|....*....|....*....|...
gi 1382878761 334 NKGLLNFMPTLSLWWFLlcsgnmaapPTLNLLG 366
Cdd:PRK12665 360 LGGLAKASPLLAVLFFV---------PALNLGG 383
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
89-342 |
1.53e-06 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 50.69 E-value: 1.53e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 89 FVFMILFLLFMLVLTFSSmSVFMFYLFFEASLIPTLFLIlgwGYQPER-------LQAgvylLFYTLLASLPLLIGIFYI 161
Cdd:PRK12647 98 YSYILLFMASMLGLVLSD-NLITLFVFWELTSITSFLLI---GFNHEReaarraaLQA----LLVTGGGGLALLAGLILL 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 162 LNSKNTLSFTLLLNYSFS-NFNLLYLSLVFAFLV----KMPMFLVHLWLPKAhVEAPV-------SGSMILAGILLKLgg 229
Cdd:PRK12647 170 GNVTGTYSLSELLASGDViREHPLYLAILLLVLGgaftKSAQFPFHFWLPNA-MEAPTpvsaylhSATMVKAGIYLLA-- 246
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 230 ygllRMFSLLqiSGVKYnyWWISISLVGG---VLISLVCLRQTDLKALIAYSSVAHMgivlsGLLTM-----TYWGLTGS 301
Cdd:PRK12647 247 ----RLNPVL--GGTPL--WQTILPLFGGltmLTGALLAVRQTDLKLILAYSTVSAL-----GTLVMllglgSELAIKAA 313
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 1382878761 302 YALMIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMP 342
Cdd:PRK12647 314 VLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMP 354
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
187-401 |
2.22e-06 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 49.77 E-value: 2.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 187 SLVFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRMFSLLQISGVKYNYWW--ISISLVGGVLISLV 264
Cdd:PRK08377 211 LLIFGLAVEAELFPLNAWAPDAYQAAPHPITVMFSAFVVKAGLYAMARILYLMQNANGWSSVLKlvIIMATLTVFFAELS 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 265 CLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTL 344
Cdd:PRK08377 291 ALRQKNVKRMIAYSSIGQVGMIALALALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLT 370
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1382878761 345 SLwwfllcsgnmaaPPTLNLLGEISLLNSIVSWSWITMIMLSFLSFFSAAYSLYLFA 401
Cdd:PRK08377 371 AL------------ALTIGALSTVGIPLFNVFWSKFRIILAGLSAGYTWPVALVLGA 415
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
8-399 |
3.42e-06 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 49.26 E-value: 3.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 8 LMFMFPL--SFLKNFYWTVQNLIFLLTFMFMINLSSLNYF-NYISYYFGLDMVSYGLI---------LLSFWICGLMLMA 75
Cdd:PRK06277 6 LMVVFPMicAIIFNLLHGKDKLIKYLTFIVAILLPILPFLaSYGYYYFGGHGLVNGYHsgitylfnpAKQIIIFVLSLIA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 76 SEKVFSTNNyEKLFVFMILFLLFMLVLTFSSM----SVFMFYLFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLLAS 151
Cdd:PRK06277 86 SLVLITGLG-EKKSSGLYVFLMLMGLASVSAIvladDIFNLYVFFEIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGS 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 152 LpLLIGIFYILNSKNTLSFT-----LLLNYSFSNFNLLYLSLVFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLK 226
Cdd:PRK06277 165 I-LLLGIGFLLASTGTLNITdihnaLLVNPTSPVIYGGLLLLIFGLLYGSGLPPFHTIKSDIYAKAKPFGSALLQTFSKF 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 227 LGGYGLLRMFSLLQISGVKYNYWW--ISISLVGGVLISLVCLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYAL 304
Cdd:PRK06277 244 VLVALMLVIFKLFGGLSYFPSAQGvlIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFH 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 305 MIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSLwwFLLCSG-NMAAPPTLN------LLGEISLLNSIVSW 377
Cdd:PRK06277 324 AINHVIYKSALFLGAGIVSYRTKTSNLRKLGGLLPVMPVVAF--MVLCAKlAISGVPPFNgfqsklMLAQAAMQANMPEL 401
|
410 420
....*....|....*....|....*
gi 1382878761 378 SwITMIMLS---FLSFFSAAYSLYL 399
Cdd:PRK06277 402 A-IIMIIVSigtFVSMMKAFYLIYL 425
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
93-360 |
5.73e-06 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 48.41 E-value: 5.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 93 ILFLLFMLVLTFSSMSVFMFYLFFEASLIPTlFLILGWGYQPERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTLSFTL 172
Cdd:PRK12663 114 ILLLMAGVIGSFLTGDLFNLYVWFEVMLIAS-FVLITLGQEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAH 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 173 L---LNYSFSNFNLLYLSLVF--AFLVKMPMFLVHlWLPKAHVEAPVSGSMILAGILLKLGGYGLLRMFSLL----QISG 243
Cdd:PRK12663 193 IamrLNDMGDTATLTTIALLFllAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpqeRELL 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 244 VKYNYWWISISLVGGVLISLVclrQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISY 323
Cdd:PRK12663 272 HPLLATMAAITMVIGALGALA---YKDIRRIAGYQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLV 348
|
250 260 270
....*....|....*....|....*....|....*..
gi 1382878761 324 ERMGSRSLLINKGLLNFMPTLSLWWFLLCSGNMAAPP 360
Cdd:PRK12663 349 RLTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPP 385
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
149-316 |
2.39e-05 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 46.35 E-value: 2.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 149 LASLPLLIGIFYILNSKNTLSFT---LLLNYSFSNFNLLYLSLVF---AFLVKMPMFLVHLWLPKAHVEAPVSGSMILAG 222
Cdd:PRK05777 165 LASGFLLYGMSLLYGATGSLSFAgiaKALADGSGNSLLLLFGLVFllvGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLAT 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 223 ILLKLGGYGLLRMF--SLLQISGVKYNYWWIsISLVGGVLISLVCLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTG 300
Cdd:PRK05777 245 APKIAAFAVLLRLLvvAFGGLSEDWQQVLAI-IAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEGYSA 323
|
170
....*....|....*.
gi 1382878761 301 SYALMIAHGLCSSGLF 316
Cdd:PRK05777 324 VLFYLLAYLFMTLGAF 339
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
52-362 |
2.53e-05 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 46.48 E-value: 2.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 52 FGLDMVSYGLILLSFWICGLMLMASEKVFSTNNYEKLFVFMILFLLFMLVLTFSSMSVFMFYLFFEASLIPTLFLILGWG 131
Cdd:PRK07691 73 FVADMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLIVIGG 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 132 YQPERLQAGVYLLFyTLLASLPLLIGIFYILNSKNTLSF-------TLLLNYSFSNFNLLYLSLVFAFLVKMPMFLVHLW 204
Cdd:PRK07691 153 TKIQLRESIKYVLI-NVVSSAFFVVAVAILYSVVGTLNMadisvkiAELSAGQTGLITVVAILFLFVFATKAGLFPLYFW 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 205 LPKAHVEAPVSGSMILAGILLKLGGYGLLRMFSLLQISGVKYNYWWISIslVGGVLISLVCL---RQTDLKALIAYSSVA 281
Cdd:PRK07691 232 LPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLILI--LALLTIIFGVIgavAYFDIKKIIIYNIMI 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 282 HMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFMPTLSlWWFLLCSGNMAAPPT 361
Cdd:PRK07691 310 AVGVILVGVAMMTESGMIGAIYYLIHDMIVKAALFLLIGIMIKITGTTDLKKMGGLIKRYPVLG-WMFFIAALSLAGIPP 388
|
.
gi 1382878761 362 L 362
Cdd:PRK07691 389 L 389
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
60-331 |
2.72e-05 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 46.26 E-value: 2.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 60 GLILLSFWICGLMLMASEKVFSTNNYEkLFVFMILFLLFMLVLTfSSMSVFMFYLFFEASLIPTLFLILGWGYQPERLQA 139
Cdd:COG1007 77 LLILLAALLVLLLSRDYLERRGLLRGE-FYALLLFATLGMMLMA-SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEA 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 140 GVYLLFYTLLASLPLLIGIFYILNSKNTLSFTLL---LNYSFSNFNLLYLSLVF---AFLVKMPMFLVHLWLPKAHVEAP 213
Cdd:COG1007 155 ALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIaaaLAAGGANSPLLLLGLVLvlaGLAFKLSAVPFHMWTPDVYEGAP 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 214 VSGSMILAGILLKLGGYGLLRMFSLLQISGVKYNYWWISI----SLVGGvliSLVCLRQTDLKALIAYSSVAHMGIVLSG 289
Cdd:COG1007 235 TPVTAFLATAPKIAAFAALLRLLVEAFPGLAADWQLLLAVlavlSMTVG---NLAALAQTNVKRMLAYSSIAHAGYLLLG 311
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1382878761 290 LLTMTYWGLTGSYALMIAHGLCSSGLF-CLANISYERMGSRSL 331
Cdd:COG1007 312 LAAGTPLGVSAALFYLLAYLFMNLGAFaVILLLSRKGGEAEEI 354
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
182-316 |
6.37e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 42.15 E-value: 6.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 182 NLLYLSLVFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGygllrmfsLLQISGVKYNYWWISISLVGGVLI 261
Cdd:MTH00198 299 SLGYLFITVAILFKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVY--------ILLTSLVITSKLLLSVAIISLVVG 370
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 1382878761 262 SLVCLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLF 316
Cdd:MTH00198 371 AFGALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQASWTYAVTYLVSALASF 425
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
266-398 |
2.38e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 40.29 E-value: 2.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 266 LRQTDLKALIAYSSVAHMG--IVLSGLLT--MTYWGLtgsyALMIAHGLCSSGLFCLANISYERMGSRSLLINKGLLNFM 341
Cdd:PRK12644 286 LRQHDLKLILAYGTVSQLGflTVLVGIGTrdAALAGL----AMLLAHALFKAALFLVVGIIDHSTGTRDIRKLSGLGRRQ 361
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1382878761 342 PTLsLWWFLLCSGNMAA-PPTLNLLGEISLLNSIV------SWSWITMIMLSFLSFFSAAYSLY 398
Cdd:PRK12644 362 PVL-AVVAALAAASMAGlPPLLGFVAKEAALEAVLhdgalgPAGPVVLAGIVLGSILTVAYSLR 424
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
255-397 |
2.62e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 40.17 E-value: 2.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 255 LVGGV-LISLV-----CLRQTDLKALIAYSSVAHMgivlsGLLTMTYwGLTGSYAL------MIAHGLCSSGLFCLANIS 322
Cdd:PRK12648 273 IVGGAgLITLLlgayfALFQHDLKGLLAYSTISHL-----GLITLLL-GLGSPLAAvaaifhIINHATFKASLFMAAGII 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 323 YERMGSRSLLINKGLLNFMP---TLSlwwfLLCSGNMAAPPTLN-------LLGEISLLNSIVSWSWITMIMLSFLSFFS 392
Cdd:PRK12648 347 DHETGTRDMRRLSGLRRLMPitaTLA----MVAAAAMAGVPLLNgflskemFFAETLDTHLLGSLDWLLPVAATLAGAFS 422
|
....*
gi 1382878761 393 AAYSL 397
Cdd:PRK12648 423 VAYSL 427
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
17-316 |
2.97e-03 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 39.93 E-value: 2.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 17 LKNFYWTVQnLIFLLTFMFMINLSSLNYFNYISYYF-GLDMVSYGLILLSFWICGLMLMASEKVFSTNNYEklFVFMILF 95
Cdd:TIGR01770 34 LKNLSYIVL-LSALVSLFLTLQYAAYLFTGFSFFIVdNFALLIKLILLLSTLLTFFFALSYLSKEKINKFE--FYILLLF 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 96 LLFMLVLTFSSMSVFMFYLFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLLASLPLLIGIFYILNSKNTLSFTLLLN 175
Cdd:TIGR01770 111 ALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLL 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 176 YSFSNFN---LLYLSLVF---AFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGGYGLLRMFSLLQisgVKYNYW 249
Cdd:TIGR01770 191 FLSNGMLnisLLLLGIVLilvGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYIL---FGFSEA 267
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1382878761 250 WISISLVGGVLI----SLVCLRQTDLKALIAYSSVAHMGIVLSGLLTMTYWGLTGSYALMIAHGLCSSGLF 316
Cdd:TIGR01770 268 WQIFLAIIAFLSmligNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIYALMSLGAF 338
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
87-363 |
3.48e-03 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 39.81 E-value: 3.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 87 KLFVFMILFLLFMLVLTFSSMSVFMFyLFFEASLIPTLFLILGWGYQPERLQAGVYLLFYTLLASLPLLIGIFYILNSKN 166
Cdd:PRK12649 112 RYYQYLLLFMGSMIGMVFSGNTIQLF-IFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITG 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 167 TLSFTLLLNYS-----FSNFNLLYLSLVFAFL---VKMPMFLVHLWLPKAhVEAPVSGSMIL-AGILLKLGGYGLLRMFS 237
Cdd:PRK12649 191 TYDIATILQDSelienIKGHPLFLITLILIFIgaaAKSAQGPFYIWLPNA-MEAPTPVSAFLhSATMVKAGVYLVARIHP 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 238 LLqiSGVKYnyWWISISLVG---GVLISLVCLRQTDLKALIAYSSVAHMGIVLSGLLTMTY----WGLTGSYALMIAHGL 310
Cdd:PRK12649 270 IF--SGTEA--WFILVSGTGmitMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYTTYhepgLGVAAATFHLLNHAT 345
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1382878761 311 CSSGLFCLANISYERMGSRSLLINKGLLNFMPtLSLWWFLLCSGNMAAPPTLN 363
Cdd:PRK12649 346 FKACLFLVAGIVAHEAATRDIRKLGGLRKEMP-ITFIVASIAALAMAGIPPLN 397
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
182-363 |
3.91e-03 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 39.43 E-value: 3.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 182 NLLYLSLVFAFLVKMPMFLVHLWLPKAHVEAPVSGSMILAGILLKLGgygllrMFSLLQIS--GVKYNYWWISISLVGGV 259
Cdd:PRK08042 180 SDIWLLGVIGFGLLAGIIPLHGWVPQAHANASAPAAALFSTVVMKIG------LLGILTLSllGGNAPLWWGVALLVLGM 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1382878761 260 LISLV----CLRQTDLKALIAYSSVAHMGIVLSGL-----------LTMTYWGLTGSYALMIAHGLCSSGLFCLANISYE 324
Cdd:PRK08042 254 ITAFVgglyALMEHNIQRLLAYHTLENIGIILLGLgagvtgialeqPALIALGLVGGLYHLLNHSLFKSVLFLGAGSVWF 333
|
170 180 190
....*....|....*....|....*....|....*....
gi 1382878761 325 RMGSRSLLINKGLLNFMPTLSLwWFLLCSGNMAAPPTLN 363
Cdd:PRK08042 334 RTGHRDIEKLGGIGKKMPVISI-AMLVGLMAMAALPPLN 371
|
|
| |
