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Conserved domains on  [gi|141796917|gb|AAI39759|]
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Scavenger receptor class F, member 2 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 678-833 1.59e-09

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 61.88  E-value: 1.59e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  678 RKAAPSPSGRKRTPSNSSVQPPGLTEEAPGPASPTPPRARA---RGRGLGLSEPTDAGGPPRSAP-EAASMLAAELRDKT 753
Cdd:PHA03247 2588 RPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPpspSPAANEPDPHPPPTVPPPERPrDDPAPGRVSRPRRA 2667

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  754 RSLGRAEKPP-PPQKAKRSVLPAATVRTASASEASGSEKAAASAPAPETPrkKTPIqkPPRKKSREAAGEPSRAGTAPGA 832
Cdd:PHA03247 2668 RRLGRAAQASsPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVS--ATPL--PPGPAAARQASPALPAAPAPPA 2743


                  .
gi 141796917  833 S 833
Cdd:PHA03247 2744 V 2744
PHA03307 super family cl33723
transcriptional regulator ICP4; Provisional
 521-831 9.25e-05

transcriptional regulator ICP4; Provisional


The actual alignment was detected with superfamily member PHA03307:

Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 46.32  E-value: 9.25e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  521 DPPSGLEQPSPSWSSRASFSSFDTTDEGPVYCVPHEEATADSRDLEATAALTEVAAVSLEPTGTSTPGEEAAVLPASSDS 600
Cdd:PHA03307  122 PPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAA 201

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  601 ERSASSVEGPSGALYARVAR-REARPARTRNEAGGLSLSPSPERRKPPPPDPATKPKVswiHGKHSAAAAAPSPPPAGRK 679
Cdd:PHA03307  202 ASPRPPRRSSPISASASSPApAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPR---PAPITLPTRIWEASGWNGP 278

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  680 AAPSPSGRKRTPSNSSVQPPGLTEEAPGPASPTPP--RARARGRGLGLSEPTDAGGPPRSAPEAASMLAAELRDKTRSLG 757
Cdd:PHA03307  279 SSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRasSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPP 358

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 141796917  758 RAEKPPPPQKAKrsvlPAATVRTASASEASGSEKAAASAPAPETPRKKTPiqkPPRKKSREAAGEPSRAGTAPG 831
Cdd:PHA03307  359 PADPSSPRKRPR----PSRAPSSPAASAGRPTRRRARAAVAGRARRRDAT---GRFPAGRPRPSPLDAGAASGA 425
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 678-833 1.59e-09

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 61.88  E-value: 1.59e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  678 RKAAPSPSGRKRTPSNSSVQPPGLTEEAPGPASPTPPRARA---RGRGLGLSEPTDAGGPPRSAP-EAASMLAAELRDKT 753
Cdd:PHA03247 2588 RPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPpspSPAANEPDPHPPPTVPPPERPrDDPAPGRVSRPRRA 2667

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  754 RSLGRAEKPP-PPQKAKRSVLPAATVRTASASEASGSEKAAASAPAPETPrkKTPIqkPPRKKSREAAGEPSRAGTAPGA 832
Cdd:PHA03247 2668 RRLGRAAQASsPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVS--ATPL--PPGPAAARQASPALPAAPAPPA 2743


                  .
gi 141796917  833 S 833
Cdd:PHA03247 2744 V 2744
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 682-820 1.11e-05

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 48.61  E-value: 1.11e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 682 PSPSGRKRTPSNSSVQPPGLTEEAPGPASPTPPRARARGRGLGLSEPTDAGGPPRSAPEAASMLAAELRDKTRSLGRAEK 761
Cdd:NF040712 203 PRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGEPPA 282

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 141796917 762 PPPPqkakrsvlpAATVRTASASEASGSEKAAASAPAPETPRKKTPIQKPPRKKSREAA 820
Cdd:NF040712 283 PGAA---------ETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRAS 332
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 521-831 9.25e-05

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 46.32  E-value: 9.25e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  521 DPPSGLEQPSPSWSSRASFSSFDTTDEGPVYCVPHEEATADSRDLEATAALTEVAAVSLEPTGTSTPGEEAAVLPASSDS 600
Cdd:PHA03307  122 PPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAA 201

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  601 ERSASSVEGPSGALYARVAR-REARPARTRNEAGGLSLSPSPERRKPPPPDPATKPKVswiHGKHSAAAAAPSPPPAGRK 679
Cdd:PHA03307  202 ASPRPPRRSSPISASASSPApAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPR---PAPITLPTRIWEASGWNGP 278

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  680 AAPSPSGRKRTPSNSSVQPPGLTEEAPGPASPTPP--RARARGRGLGLSEPTDAGGPPRSAPEAASMLAAELRDKTRSLG 757
Cdd:PHA03307  279 SSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRasSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPP 358

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 141796917  758 RAEKPPPPQKAKrsvlPAATVRTASASEASGSEKAAASAPAPETPRKKTPiqkPPRKKSREAAGEPSRAGTAPG 831
Cdd:PHA03307  359 PADPSSPRKRPR----PSRAPSSPAASAGRPTRRRARAAVAGRARRRDAT---GRFPAGRPRPSPLDAGAASGA 425
Treacle pfam03546
Treacher Collins syndrome protein Treacle;
678-833 1.96e-04

Treacher Collins syndrome protein Treacle;


Pssm-ID: 460967 [Multi-domain]  Cd Length: 531  Bit Score: 45.06  E-value: 1.96e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  678 RKAAP-SPSGRKRTPSNSSVQPPGLTEEAPGPA---SPTPPRARARGRGLGLSE----------PTDAGGPPRSAPEAAS 743
Cdd:pfam03546 268 RKGTPiTPTSAKVPPVRVGTPAPWKAGTVTSPAcasSPAVARGAQRPEEDSSSSeeseseeetaPAAAVGQAKSVGKGLQ 347

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  744 MLAAELRDKTRSlGRAEKPPPPQKAKRSVlpaATVRTASASEASGSEKAAASAPAPETPRKKTPIQKPPRKKSREAageP 823
Cdd:pfam03546 348 GKAASAPTKGPS-GQGTAPVPPGKTGPAV---AQVKAEAQEDSESSEEESDSEEAAATPAQVKASGKTPQAKANPA---P 420

                         170
                  ....*....|
gi 141796917  824 SRAGTAPGAS 833
Cdd:pfam03546 421 TKASSAKGAA 430
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 680-798 3.72e-04

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 44.07  E-value: 3.72e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 680 AAPSPSGRKRTPSNSSVQPPGLTEEAPGPASPtpPRARARGRGLGLSEPT-DAGGPPRSAPEAASMLAAELRDKTRSLGR 758
Cdd:COG3266  256 KAPSQASSASAPATTSLGEQQEVSLPPAVAAQ--PAAAAAAQPSAVALPAaPAAAAAAAAPAEAAAPQPTAAKPVVTETA 333

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 141796917 759 AEKPPPPQKAKRSVLPAAtvrTASASEASGSEKAAASAPA 798
Cdd:COG3266  334 APAAPAPEAAAAAAAPAA---PAVAKKLAADEQWLASQPA 370
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 678-833 1.59e-09

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 61.88  E-value: 1.59e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  678 RKAAPSPSGRKRTPSNSSVQPPGLTEEAPGPASPTPPRARA---RGRGLGLSEPTDAGGPPRSAP-EAASMLAAELRDKT 753
Cdd:PHA03247 2588 RPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPpspSPAANEPDPHPPPTVPPPERPrDDPAPGRVSRPRRA 2667

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  754 RSLGRAEKPP-PPQKAKRSVLPAATVRTASASEASGSEKAAASAPAPETPrkKTPIqkPPRKKSREAAGEPSRAGTAPGA 832
Cdd:PHA03247 2668 RRLGRAAQASsPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVS--ATPL--PPGPAAARQASPALPAAPAPPA 2743


                  .
gi 141796917  833 S 833
Cdd:PHA03247 2744 V 2744
PHA03247 PHA03247
large tegument protein UL36; Provisional
 518-830 4.74e-08

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 57.26  E-value: 4.74e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  518 SFLDPPSGLEQPSPSwssrasfssfdttdegpvycvPHEEATADSRDLEATAALTEVAAVSLEPTGTSTPgeEAAVLPAS 597
Cdd:PHA03247 2697 SLADPPPPPPTPEPA---------------------PHALVSATPLPPGPAAARQASPALPAAPAPPAVP--AGPATPGG 2753

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  598 SDSERSASSVEGPSGALYARVarREARPARTRNEAGGLSLSPSPERRKPPPPDPATKPKVSwihgkhsaaaaapspppaG 677
Cdd:PHA03247 2754 PARPARPPTTAGPPAPAPPAA--PAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVL------------------A 2813

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  678 RKAAPSPSGRkrtPSNSSVQPPGLTEEAPGPASPTPPRARARGRGLGLSEPTDAGGPPRSAPeaaSMLAAELRDKTRSLG 757
Cdd:PHA03247 2814 PAAALPPAAS---PAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPA---AKPAAPARPPVRRLA 2887

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 141796917  758 RAEKPPPPQKAKRSVLPAATVRTASASEASGSEKAAASAPAPETPRKKTPIQKPPRKKSREAAGEPSRAGTAP 830
Cdd:PHA03247 2888 RPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVP 2960
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
625-832 1.18e-07

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 55.63  E-value: 1.18e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 625 PARTRNEAGGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAAPSPPPAGRKAAPSPSGRKRTPsNSSVQPPGLTEE 704
Cdd:PRK07003 360 PAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAP-PAAPAPPATADR 438

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 705 APGPAS-PTPPRARARGRGLGLSEPTDAGGPPRSAPEAASMLAAElrdkTRSLGRAEKPPPPQKAKRSVLPAATVRTASA 783
Cdd:PRK07003 439 GDDAADgDAPVPAKANARASADSRCDERDAQPPADSGSASAPASD----APPDAAFEPAPRAAAPSAATPAAVPDARAPA 514

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 141796917 784 SEASGSEKAAASAPAPETPrkktpiqkPPrkkSREAAGEPSRAGTAPGA 832
Cdd:PRK07003 515 AASREDAPAAAAPPAPEAR--------PP---TPAAAAPAARAGGAAAA 552
PHA03247 PHA03247
large tegument protein UL36; Provisional
 581-829 6.53e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 53.40  E-value: 6.53e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  581 PTGTSTPGEEAAVLPASSDSERSASSVEGPSGALYARVARREARPARtrneagglslSPSPERRKPPPPDPATKPKVSWI 660
Cdd:PHA03247 2629 PSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQ----------ASSPPQRPRRRAARPTVGSLTSL 2698

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  661 HGKHSAAAAAPSPPPAGRKAAPSP----SGRKRTPSNSSVQPPGLTEEAPG-PASPTPPRARARGRGLGLSEP--TDAGG 733
Cdd:PHA03247 2699 ADPPPPPPTPEPAPHALVSATPLPpgpaAARQASPALPAAPAPPAVPAGPAtPGGPARPARPPTTAGPPAPAPpaAPAAG 2778

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  734 PPRSAPEAASMLAAElrdktrSLGRAEKPPPPQKAKRSVLPAATVRTASASEASGSEKAAASAPAPETPRKKTPIQKPPR 813
Cdd:PHA03247 2779 PPRRLTRPAVASLSE------SRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPL 2852

                         250
                  ....*....|....*.
gi 141796917  814 KKSREAAGEPSRAGTA 829
Cdd:PHA03247 2853 GGSVAPGGDVRRRPPS 2868
PHA03247 PHA03247
large tegument protein UL36; Provisional
 674-830 3.54e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.09  E-value: 3.54e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  674 PPAGRKAAPSPSGRKRTPSNSSVQPPGLTEEAPgPASPTPPRARARGRGLGLSEPTDAGGPPRSAPEAASMLAAElrdkt 753
Cdd:PHA03247 2492 AGAAPDPGGGGPPDPDAPPAPSRLAPAILPDEP-VGEPVHPRMLTWIRGLEELASDDAGDPPPPLPPAAPPAAPD----- 2565

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  754 RSLgraekpPPPQKAKRSVLPAATVRTASAS--------EASGSEKAAASAPAPETPR-KKTPIQKPPRKKSREAAGEPS 824
Cdd:PHA03247 2566 RSV------PPPRPAPRPSEPAVTSRARRPDappqsarpRAPVDDRGDPRGPAPPSPLpPDTHAPDPPPPSPSPAANEPD 2639


                  ....*.
gi 141796917  825 RAGTAP 830
Cdd:PHA03247 2640 PHPPPT 2645
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
677-831 3.60e-06

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 50.64  E-value: 3.60e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 677 GRKAAPSPSGRKRTPSNSSVQPPGLTEEAPGPASPTPPRARARGRglglSEPTDAGGPPRSAPEAASMLAAELRDKTRSL 756
Cdd:PRK12323 370 GGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAA----AARAVAAAPARRSPAPEALAAARQASARGPG 445

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 757 GRAEKPPPPQKAkrsvlPAATVRTASASEA----------SGSEKAAASAPAPETPrkktpiqkPPRKKSREAAGEPSRA 826
Cdd:PRK12323 446 GAPAPAPAPAAA-----PAAAARPAAAGPRpvaaaaaaapARAAPAAAPAPADDDP--------PPWEELPPEFASPAPA 512


                 ....*
gi 141796917 827 GTAPG 831
Cdd:PRK12323 513 QPDAA 517
PHA03247 PHA03247
large tegument protein UL36; Provisional
 625-833 4.72e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 50.71  E-value: 4.72e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  625 PARTRNEAGGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAAPSPPPAGRKAAPSPSGRKRTPSNSSVQPPGLTEE 704
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEP 2710

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  705 APGPASPTPPRARARGRGLGLSEPTDAGGPPRSAPEAASMLAAELRDKTRSLGRAEKPPPPQKAKRSVLPAATVRTASAS 784
Cdd:PHA03247 2711 APHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVAS 2790

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 141796917  785 EASgsekAAASAPAPETPRKKTPIQKPPR----KKSREAAGEPSRAGTAPGAS 833
Cdd:PHA03247 2791 LSE----SRESLPSPWDPADPPAAVLAPAaalpPAASPAGPLPPPTSAQPTAP 2839
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 677-832 8.49e-06

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 49.48  E-value: 8.49e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 677 GRKA---APSPSG------------RKRTPSNSSVQPPGLTEEAPGPASPTPPRARARGRGLGLSEPTDAGGPPRSAPEA 741
Cdd:PRK07994 335 GRKDlplAPDRRMgvemtllrmlafHPAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVP 414

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 742 ASMLAAELRDKTRSLGRAEKPPPPQKAKrsvlPAATVRTASASeaSGSEKAAASAPAPETPRKKTPIQKPPRKKSREAAG 821
Cdd:PRK07994 415 LPETTSQLLAARQQLQRAQGATKAKKSE----PAAASRARPVN--SALERLASVRPAPSALEKAPAKKEAYRWKATNPVE 488

                        170
                 ....*....|.
gi 141796917 822 EPSRAGTAPGA 832
Cdd:PRK07994 489 VKKEPVATPKA 499
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 682-820 1.11e-05

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 48.61  E-value: 1.11e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 682 PSPSGRKRTPSNSSVQPPGLTEEAPGPASPTPPRARARGRGLGLSEPTDAGGPPRSAPEAASMLAAELRDKTRSLGRAEK 761
Cdd:NF040712 203 PRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDEATRDAGEPPA 282

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 141796917 762 PPPPqkakrsvlpAATVRTASASEASGSEKAAASAPAPETPRKKTPIQKPPRKKSREAA 820
Cdd:NF040712 283 PGAA---------ETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPPPAPKPKRRRRRAS 332
valS PRK14900
valyl-tRNA synthetase; Provisional
 728-832 1.11e-05

valyl-tRNA synthetase; Provisional


Pssm-ID: 237855 [Multi-domain]  Cd Length: 1052  Bit Score: 49.22  E-value: 1.11e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  728 PTDAGGPPRSAPEAASMLAAELRDKTRSLGRAEKPPPPQ---------KAKRSVLPAaTVRTASASEASGSEKAAASAPA 798
Cdd:PRK14900  924 PTQDGPAAEAQPAQENTVVESAEKAVAAVSEAAQQAATAvasgiekvaEAVRKTVRR-SVKKAAATRAAMKKKVAKKAPA 1002

                          90       100       110
                  ....*....|....*....|....*....|....
gi 141796917  799 PETPRKKTPIQKPPRKKSREAAGEPSRAGTAPGA 832
Cdd:PRK14900 1003 KKAAAKKAAAKKAAAKKKVAKKAPAKKVARKPAA 1036
PHA03247 PHA03247
large tegument protein UL36; Provisional
 610-832 3.33e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 48.01  E-value: 3.33e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  610 PSG-ALYARVARREA--RPARTRNEAGGLSLSPSPERRKPPPPDPATKPKVSwihgkHSAAAAAPSPPPAGRKAAPSPSG 686
Cdd:PHA03247 2577 PSEpAVTSRARRPDAppQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPP-----PSPSPAANEPDPHPPPTVPPPER 2651

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  687 RKRTPSNSSVQPPGLTEEAPGPASPTPPRARARGRGL--------GLSEPTDAGGPPRSAPEAASMlAAELRDKTRSLGR 758
Cdd:PHA03247 2652 PRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAArptvgsltSLADPPPPPPTPEPAPHALVS-ATPLPPGPAAARQ 2730

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  759 AEKPP-----PPQKAKRSVLPAATVRTASASEASGSEKAAA-SAPAPETPRKKTPIQKPPRKKSREAAGEPSRAGTAPGA 832
Cdd:PHA03247 2731 ASPALpaapaPPAVPAGPATPGGPARPARPPTTAGPPAPAPpAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAA 2810
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 681-833 3.46e-05

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 47.86  E-value: 3.46e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  681 APSPSGRKRTPSNSSVQPPGLTEEAPGPASPTPPRARARGRGLGLSEPTDAGGPPRSAPEAASMLAAELRDKTRSLGRAE 760
Cdd:PHA03307   70 GPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGSPGPPPA 149

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 141796917  761 KPPPPQKAKRSVLPAATVRTASASEASGSekAAASAPAPETPRKKTPIQKPPRKKSREAAGEPSRAGTAPGAS 833
Cdd:PHA03307  150 ASPPAAGASPAAVASDAASSRQAALPLSS--PEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASASSP 220
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
707-832 3.53e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 47.56  E-value: 3.53e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 707 GPASPTPPRARARGRGLGLSEPTDAGGPPRSAPEAASMLAAELRDKTRSLGRAEKPPPPQKAkrsVLPAATVRTAsasEA 786
Cdd:PRK12323 370 GGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPE---ALAAARQASA---RG 443

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 141796917 787 SGSEKAAASAPAPETPRKKTPIQKPPRKKSREAAGEPSRAGTAPGA 832
Cdd:PRK12323 444 PGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAP 489
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
697-830 4.04e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 47.18  E-value: 4.04e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 697 QPPGLTEEAPGPASPTPPRARARGRGLGLSEPTDAGGPPRSAPEAASMLAAELRDKTRSLGRAEKPPPPQKAKRSVLPAA 776
Cdd:PRK12323 364 RPGQSGGGAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARG 443

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 141796917 777 TVRTASASEASGSEKAAASAPAPETPRKKTPIQ-KPPRKKSREAAGEPSRAGTAP 830
Cdd:PRK12323 444 PGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAaAAPARAAPAAAPAPADDDPPP 498
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
622-824 4.52e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 47.18  E-value: 4.52e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 622 EARPARTrneAGGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAAPSPPPAGRKAAPSPSGRKRTPSNSSVQPPGL 701
Cdd:PRK12323 371 GAGPATA---AAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGA 447

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 702 TEEAPGPASPTPPRARARGRGLGLSEPTDAGGPPRSAPEAASMLAAELRDKTRSLGRAEKPPPP---QKAKRSVLPAATV 778
Cdd:PRK12323 448 PAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPaqpDAAPAGWVAESIP 527

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 141796917 779 RTASASEASGSEKAAASAPAPETPRKKTPIQK--PPRKKSREAAGEPS 824
Cdd:PRK12323 528 DPATADPDDAFETLAPAPAAAPAPRAAAATEPvvAPRPPRASASGLPD 575
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
581-833 5.61e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 46.77  E-value: 5.61e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 581 PTGTSTPGEEAAVLPASSDSERSASSVEGPSGALYARVARREARPAR-----TRNEAGGLSLSPSPERRKPPPPDPATKP 655
Cdd:PRK07003 383 PGARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAApappaTADRGDDAADGDAPVPAKANARASADSR 462

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 656 KVSwihgkhsaaaaapspppagRKAAPSPSGRKRTPSNSSVQPPGLTEEAP---GPASPTPPRARARGRGLGLSEPTDAG 732
Cdd:PRK07003 463 CDE-------------------RDAQPPADSGSASAPASDAPPDAAFEPAPraaAPSAATPAAVPDARAPAAASREDAPA 523

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 733 GPPRSAPEAASMLAAELRDKTRSLGRAekppppqkAKRSVLPAATVRTAS-------ASEASGSEKAAASAPAPETPRKK 805
Cdd:PRK07003 524 AAAPPAPEARPPTPAAAAPAARAGGAA--------AALDVLRNAGMRVSSdrgaraaAAAKPAAAPAAAPKPAAPRVAVQ 595

                        250       260
                 ....*....|....*....|....*...
gi 141796917 806 TPIqkpPRKKSREAAGEPSRAGTAPGAS 833
Cdd:PRK07003 596 VPT---PRARAATGDAPPNGAARAEQAA 620
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
705-833 5.80e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 46.77  E-value: 5.80e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 705 APGPASPTPPRARARGR-----GLGLSEPTDAGGPPRSAPEAASMLAAELRDKTRSLGRAEKPPPPQKAKRSVLPA---A 776
Cdd:PRK07003 368 PGGGVPARVAGAVPAPGaraaaAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAAdgdA 447

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 141796917 777 TVRTASASEASGSEKAA------------ASAPAPETPRKKTPIQKPPRKKSREAAGEPSRAGTAPGAS 833
Cdd:PRK07003 448 PVPAKANARASADSRCDerdaqppadsgsASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAA 516
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
 679-830 8.59e-05

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 45.71  E-value: 8.59e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 679 KAAPSPSGRKrtpsNSSVQPPGLTEEAPGPASPTPPRArARGRGLGLSEPTDAGGPPRSAPEAASMLAAELRDKTRSLGR 758
Cdd:PTZ00436 206 KKAAAPSGKK----SAKAAAPAKAAAAPAKAAAPPAKA-AAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAAPPAK 280

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 141796917 759 AEKPPPPQKAKRSVLPAATVRTASASEASGSEKAAASAPAPETPRKKTPIQKPPRKksreAAGEPSRAGTAP 830
Cdd:PTZ00436 281 AAAPPAKAAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAATPPAK----AAAPPAKAAAAP 348
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 521-831 9.25e-05

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 46.32  E-value: 9.25e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  521 DPPSGLEQPSPSWSSRASFSSFDTTDEGPVYCVPHEEATADSRDLEATAALTEVAAVSLEPTGTSTPGEEAAVLPASSDS 600
Cdd:PHA03307  122 PPASPPPSPAPDLSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAA 201

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  601 ERSASSVEGPSGALYARVAR-REARPARTRNEAGGLSLSPSPERRKPPPPDPATKPKVswiHGKHSAAAAAPSPPPAGRK 679
Cdd:PHA03307  202 ASPRPPRRSSPISASASSPApAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPR---PAPITLPTRIWEASGWNGP 278

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  680 AAPSPSGRKRTPSNSSVQPPGLTEEAPGPASPTPP--RARARGRGLGLSEPTDAGGPPRSAPEAASMLAAELRDKTRSLG 757
Cdd:PHA03307  279 SSRPGPASSSSSPRERSPSPSPSSPGSGPAPSSPRasSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPP 358

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 141796917  758 RAEKPPPPQKAKrsvlPAATVRTASASEASGSEKAAASAPAPETPRKKTPiqkPPRKKSREAAGEPSRAGTAPG 831
Cdd:PHA03307  359 PADPSSPRKRPR----PSRAPSSPAASAGRPTRRRARAAVAGRARRRDAT---GRFPAGRPRPSPLDAGAASGA 425
Treacle pfam03546
Treacher Collins syndrome protein Treacle;
678-833 1.96e-04

Treacher Collins syndrome protein Treacle;


Pssm-ID: 460967 [Multi-domain]  Cd Length: 531  Bit Score: 45.06  E-value: 1.96e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  678 RKAAP-SPSGRKRTPSNSSVQPPGLTEEAPGPA---SPTPPRARARGRGLGLSE----------PTDAGGPPRSAPEAAS 743
Cdd:pfam03546 268 RKGTPiTPTSAKVPPVRVGTPAPWKAGTVTSPAcasSPAVARGAQRPEEDSSSSeeseseeetaPAAAVGQAKSVGKGLQ 347

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  744 MLAAELRDKTRSlGRAEKPPPPQKAKRSVlpaATVRTASASEASGSEKAAASAPAPETPRKKTPIQKPPRKKSREAageP 823
Cdd:pfam03546 348 GKAASAPTKGPS-GQGTAPVPPGKTGPAV---AQVKAEAQEDSESSEEESDSEEAAATPAQVKASGKTPQAKANPA---P 420

                         170
                  ....*....|
gi 141796917  824 SRAGTAPGAS 833
Cdd:pfam03546 421 TKASSAKGAA 430
DUF4045 pfam13254
Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. ...
 677-830 2.01e-04

Domain of unknown function (DUF4045); This presumed domain is functionally uncharacterized. This domain family is found in bacteria and eukaryotes, and is typically between 384 and 430 amino acids in length.


Pssm-ID: 433066 [Multi-domain]  Cd Length: 415  Bit Score: 44.77  E-value: 2.01e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  677 GRKAAP---SPSGRKRTPSNSSVQPPGLTEEAPGPASPTPPRARARGRglglSEPTDAGGPPRSAPEAASMLAAELRDKT 753
Cdd:pfam13254 195 GRPNSFkevTPVGLMRSPAPGGHSKSPSVSGISADSSPTKEEPSEEAD----TLSTDKEQSPAPTSASEPPPKTKELPKD 270

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 141796917  754 RslgraEKPPPPQKAKrsvlPAATVRTASASEASGSEKAAASAPAPETPRKKTPIQKPPRKKSREAAGEPSRAGTAP 830
Cdd:pfam13254 271 S-----EEPAAPSKSA----EASTEKKEPDTESSPETSSEKSAPSLLSPVSKASIDKPLSSPDRDPLSPKPKPQSPP 338
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
567-812 2.25e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 44.84  E-value: 2.25e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 567 ATAALTEVAAVSLEPTGTSTPGEEAAVLPAssdsersassvegPSGALYARVARREARPARTRNEAGGLSLSPSPERRKP 646
Cdd:PRK07003 392 GASAVPAVTAVTGAAGAALAPKAAAAAAAT-------------RAEAPPAAPAPPATADRGDDAADGDAPVPAKANARAS 458

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 647 PPPDPATKPKVSWIHGKHSAAAAAPSPPPAGRKAAPSPSGRKRTPSNSSVQPPGL----TEEAPGPASPTPPRARArgrg 722
Cdd:PRK07003 459 ADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPaaasREDAPAAAAPPAPEARP---- 534

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 723 lglSEPTdAGGPPRSAPEAASML----AAELR---DKTRSLGRAEKPPPPQKA------KRSVLPAATVRTASASEASGS 789
Cdd:PRK07003 535 ---PTPA-AAAPAARAGGAAAALdvlrNAGMRvssDRGARAAAAAKPAAAPAAapkpaaPRVAVQVPTPRARAATGDAPP 610

                        250       260
                 ....*....|....*....|...
gi 141796917 790 EKAAASAPAPETPRKKTPIQKPP 812
Cdd:PRK07003 611 NGAARAEQAAESRGAPPPWEDIP 633
PRK12727 PRK12727
flagellar biosynthesis protein FlhF;
687-833 3.55e-04

flagellar biosynthesis protein FlhF;


Pssm-ID: 237182 [Multi-domain]  Cd Length: 559  Bit Score: 44.21  E-value: 3.55e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 687 RKRTPSNSSVQPPglteeAPGPASPTPPRARARGRglgLSEPTDAGGPPRSAPEAASMLAAELRDKTRSLGRAEKPPPPQ 766
Cdd:PRK12727  59 RSDTPATAAAPAP-----APQAPTKPAAPVHAPLK---LSANANMSQRQRVASAAEDMIAAMALRQPVSVPRQAPAAAPV 130

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 141796917 767 KAKRSVLPAATVRTASASEASGSEKAAASAPAPETPRKKT----PIQKPPRKKSREAAGEPSRAGTAPGAS 833
Cdd:PRK12727 131 RAASIPSPAAQALAHAAAVRTAPRQEHALSAVPEQLFADFlttaPVPRAPVQAPVVAAPAPVPAIAAALAA 201
PHA03247 PHA03247
large tegument protein UL36; Provisional
 553-833 3.65e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.54  E-value: 3.65e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  553 VPHEEATADSRDLEATAALTEVAAVSLEPTGTSTPGEEAAVLPASSDSERSASSVEGPSGALYARVARREARPARTRNEA 632
Cdd:PHA03247 2744 VPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAAS 2823

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  633 GGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAAPSPPPAGRKAAPSPSGRKRTPSNSSVQPPGLTEEAPGPASPT 712
Cdd:PHA03247 2824 PAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPD 2903

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  713 PPrARARgrglglsePTDAGGPPRSAPEAASmlaaelrdktrslGRAEKPPPPQKAKRSVLPAATVRTASASEASGSEKA 792
Cdd:PHA03247 2904 QP-ERPP--------QPQAPPPPQPQPQPPP-------------PPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQ 2961

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 141796917  793 ---AASAPAP-ETPRKKTPIQKPPRKKSrEAAGEPSRAGTAPGAS 833
Cdd:PHA03247 2962 pwlGALVPGRvAVPRFRVPQPAPSREAP-ASSTPPLTGHSLSRVS 3005
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 680-798 3.72e-04

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 44.07  E-value: 3.72e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 680 AAPSPSGRKRTPSNSSVQPPGLTEEAPGPASPtpPRARARGRGLGLSEPT-DAGGPPRSAPEAASMLAAELRDKTRSLGR 758
Cdd:COG3266  256 KAPSQASSASAPATTSLGEQQEVSLPPAVAAQ--PAAAAAAQPSAVALPAaPAAAAAAAAPAEAAAPQPTAAKPVVTETA 333

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|
gi 141796917 759 AEKPPPPQKAKRSVLPAAtvrTASASEASGSEKAAASAPA 798
Cdd:COG3266  334 APAAPAPEAAAAAAAPAA---PAVAKKLAADEQWLASQPA 370
valS PRK14900
valyl-tRNA synthetase; Provisional
 685-821 5.61e-04

valyl-tRNA synthetase; Provisional


Pssm-ID: 237855 [Multi-domain]  Cd Length: 1052  Bit Score: 43.83  E-value: 5.61e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  685 SGRKRTPSNSSVQPPglTEEAPGPasptppRARARGRGLGLSEPTDAGGPPRSAPEAASMLAAE----LRDKTRSLGRA- 759
Cdd:PRK14900  910 SARRDTMEIQNEQKP--TQDGPAA------EAQPAQENTVVESAEKAVAAVSEAAQQAATAVASgiekVAEAVRKTVRRs 981

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 141796917  760 --EKPPPPQKAKRSVLPAATVRTASASEASGSEKAAASAPAPETPRKKTPiQKPPRKKS-----REAAG 821
Cdd:PRK14900  982 vkKAAATRAAMKKKVAKKAPAKKAAAKKAAAKKAAAKKKVAKKAPAKKVA-RKPAAKKAakkpaRKAAG 1049
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 699-833 7.99e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 43.16  E-value: 7.99e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 699 PGLTEEAPGPASPTPPRARARGRGLGLSEPTDAGGPPRSAPEAASMLAAelrdktrslgrAEKPPPPQKAKRSVLPAAtv 778
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAP-----------AAPPAAAPPAPVAAPAAA-- 432

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 141796917 779 rtASASEASGSEKAAASAPAPETPRKKTPIQKPPRKKSREAAGEPSRAGTAPGAS 833
Cdd:PRK14951 433 --APAAAPAAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAA 485
PRK10905 PRK10905
cell division protein DamX; Validated
 708-832 2.07e-03

cell division protein DamX; Validated


Pssm-ID: 236792 [Multi-domain]  Cd Length: 328  Bit Score: 41.08  E-value: 2.07e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 708 PASPTPPRARARGRGLGLSEPTDAGGPPRsaPEAASMLAAElrDKTRSLGRAEKPPPPQKAKRSVlPAATVRTASA--SE 785
Cdd:PRK10905 127 PATVAPVRNGNASRQTAKTQTAERPATTR--PARKQAVIEP--KKPQATAKTEPKPVAQTPKRTE-PAAPVASTKApaAT 201

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 141796917 786 ASGSEKAAASAPAPETPRKKTPIQKPPrkKSREAAGEPSRAGTAPGA 832
Cdd:PRK10905 202 STPAPKETATTAPVQTASPAQTTATPA--AGGKTAGNVGSLKSAPSS 246
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 705-833 2.22e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.51  E-value: 2.22e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 705 APGPASPTPPRARA-RGRGLGLSEPTDAGGPPRSAPEAASMLAAELRDKTRSLGRAEKPPPPQKAKRSVLPAATVRTASA 783
Cdd:PRK07764 591 APGAAGGEGPPAPAsSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWP 670

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 141796917 784 SEASGSEKAAASAPAPETPRKKTPIQKPPRKKSREAAGEPSRAGTAPGAS 833
Cdd:PRK07764 671 AKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQ 720
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 705-833 2.30e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.51  E-value: 2.30e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 705 APGPASPTPPRARARGrglglsePTDAGGPPRSAPEAASMLAAELRDKTRSLGRAEKPPPPQKAKRSVLPAATVRTASAS 784
Cdd:PRK07764 388 AGGAGAPAAAAPSAAA-------AAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAA 460

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 141796917 785 EASGSEKAAASAPAPETPRkktPIQKPPRKKSREAAGEPSRAGTAPGAS 833
Cdd:PRK07764 461 APSAQPAPAPAAAPEPTAA---PAPAPPAAPAPAAAPAAPAAPAAPAGA 506
PRK14959 PRK14959
DNA polymerase III subunits gamma and tau; Provisional
 690-802 2.49e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 184923 [Multi-domain]  Cd Length: 624  Bit Score: 41.59  E-value: 2.49e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 690 TPSNSSVQPPGlTEEAPGPAS------PTPPRARARGRGLGLSEPTDAGGPPRSAPEAASMLAAELRDKTRSLGRAEKPP 763
Cdd:PRK14959 372 RPSGGGASAPS-GSAAEGPASggaatiPTPGTQGPQGTAPAAGMTPSSAAPATPAPSAAPSPRVPWDDAPPAPPRSGIPP 450

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|.
gi 141796917 764 PPQKA--KRSVLPAATVRTASASEASGSEkAAASAPAPETP 802
Cdd:PRK14959 451 RPAPRmpEASPVPGAPDSVASASDAPPTL-GDPSDTAEHTP 490
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
558-777 2.84e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 41.40  E-value: 2.84e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 558 ATADSRDLEATAALTEVAAVSLEPTGTSTPGEEAAVLPASSDSERSASSVEGPSGALYARVARREARPARTRNEAGGLSL 637
Cdd:PRK12323 377 AAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAA 456

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 638 SPSPERRKPPPPDpatkpkvswihgkhsaaaaapSPPPAGRKAAPSPSGRKRTPSNSSVQPPGLTEEAPGPASPTPPRAR 717
Cdd:PRK12323 457 APAAAARPAAAGP---------------------RPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPD 515

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 141796917 718 ARGRGL---GLSEPTDAGGPPRSAPEAASMLAAELRDKTRSLGRAEKPPPPQKAKRSVLPAAT 777
Cdd:PRK12323 516 AAPAGWvaeSIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFD 578
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 516-833 3.05e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 41.31  E-value: 3.05e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  516 NCSFLDPPSGLEQPSPSWSSRASFSSFDTTDEgPVYCVPHEEATADSRDLEATAALTEVAAVSLEPTGTSTPGEEAAVLP 595
Cdd:PHA03307   65 FEPPTGPPPGPGTEAPANESRSTPTWSLSTLA-PASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDLSEMLRPVGS 143

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  596 ASSDSERSASSVEGPSGAlyarvarrEARPARTRNEAGGLSLSPSPERRKPPPPDPATKPKVSWIHGKHSAAAAAPSPPP 675
Cdd:PHA03307  144 PGPPPAASPPAAGASPAA--------VASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISA 215

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  676 AGRKAAPSP-----SGRKRTPSNSSVQPP-----GLTEEAPGPaSPTPPRARARGRGLGLSEPTDAGGPPRSAPEAASML 745
Cdd:PHA03307  216 SASSPAPAPgrsaaDDAGASSSDSSSSESsgcgwGPENECPLP-RPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRER 294

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  746 AAELRDKTRSLGRAEKPPPP---QKAKRSVLPAATVRTASASEASGSEKAAASAPAPETPRKKTPiQKPPRKKSREAAGE 822
Cdd:PHA03307  295 SPSPSPSSPGSGPAPSSPRAsssSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPP-ADPSSPRKRPRPSR 373

                         330
                  ....*....|.
gi 141796917  823 PSRAGTAPGAS 833
Cdd:PHA03307  374 APSSPAASAGR 384
flhF PRK06995
flagellar biosynthesis protein FlhF;
710-820 3.22e-03

flagellar biosynthesis protein FlhF;


Pssm-ID: 235904 [Multi-domain]  Cd Length: 484  Bit Score: 40.72  E-value: 3.22e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 710 SPTPPRARARGRGLGLSEPTDAGGPPRSAPEAASMLAaelrDKTRSLGRAEKPPPPQKAKRSVLPAAtvRTASASEASGS 789
Cdd:PRK06995  52 APPAAAAPAAAQPPPAAAPAAVSRPAAPAAEPAPWLV----EHAKRLTAQREQLVARAAAPAAPEAQ--APAAPAERAAA 125

                         90       100       110
                 ....*....|....*....|....*....|.
gi 141796917 790 EKAAASAPAPETPRKKTPIQKPPRKKSREAA 820
Cdd:PRK06995 126 ENAARRLARAAAAAPRPRVPADAAAAVADAV 156
PRK01297 PRK01297
ATP-dependent RNA helicase RhlB; Provisional
 758-828 3.61e-03

ATP-dependent RNA helicase RhlB; Provisional


Pssm-ID: 234938 [Multi-domain]  Cd Length: 475  Bit Score: 40.67  E-value: 3.61e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 141796917 758 RAEKPPPPQKAKRSVLPAATVRTASASEASGSEKAAASAPAPETPRKKTPIQKPPRKKSREAAGEPSRAGT 828
Cdd:PRK01297  17 PAPAPPSPAAAPAPPPPAKTAAPATKAAAPAAAAPRAEKPKKDKPRRERKPKPASLWKLEDFVVEPQEGKT 87
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 691-830 4.82e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 40.47  E-value: 4.82e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 691 PSNSSVQPPGLTEEAPGPASPTPPRARARgrglglSEPTDAGGPPRSAPEAASMLAAelrdktrslgRAEKPPPPQKAKR 770
Cdd:PRK14951 366 PAAAAEAAAPAEKKTPARPEAAAPAAAPV------AQAAAAPAPAAAPAAAASAPAA----------PPAAAPPAPVAAP 429

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 771 SVLPAATVRTASASEASgSEKAAASAPAPETPRKKTPIQKPPRKKSREAAGEPSRAGTAP 830
Cdd:PRK14951 430 AAAAPAAAPAAAPAAVA-LAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARL 488
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 672-833 5.08e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 40.35  E-value: 5.08e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 672 SPPPAGRKAAPSPSGRKRTPSNSSVQPPGLTEEAPG----PASPTPPRARARGRGLGLSEPTDAGGPPRSAPEAASMLAA 747
Cdd:PRK07764 623 APAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAvpdaSDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPA 702

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 748 ELRDKTRSLGRAEKPPPPQkakrsvlpaatvRTASASEASGSEKAAASAPAPETPRKKT-PIQKPPRKKSREAAGEPSRA 826
Cdd:PRK07764 703 PAPAATPPAGQADDPAAQP------------PQAAQGASAPSPAADDPVPLPPEPDDPPdPAGAPAQPPPPPAPAPAAAP 770


                 ....*..
gi 141796917 827 GTAPGAS 833
Cdd:PRK07764 771 AAAPPPS 777
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
745-819 5.57e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 40.37  E-value: 5.57e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 141796917 745 LAAELRDKTRSLGRAEkPPPPQKAKRSVLPAATVRTASASEASGSEKAAASAPAPET---PRKKTPIQKPPRKKSREA 819
Cdd:COG5373   33 LEAELAEAAEAASAPA-EPEPEAAAAATAAAPEAAPAPVPEAPAAPPAAAEAPAPAAaapPAEAEPAAAPAAASSFEE 109
GGN pfam15685
Gametogenetin; GGN is a family of proteins largely found in mammals. It reacts with POG in the ...
 678-826 6.08e-03

Gametogenetin; GGN is a family of proteins largely found in mammals. It reacts with POG in the maturation of sperm and is expressed virtually only in the testis. It is found to be associated with the intracellular membrane, binds with GGNBP1 and may be involved in vesicular trafficking.


Pssm-ID: 434857 [Multi-domain]  Cd Length: 668  Bit Score: 40.14  E-value: 6.08e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  678 RKAAPSPSGrkrtPSNSSVQPPGLTEEAPGPASPTPPrarARGRGLGLSEPTDAGGPPRSAPEAASMLAAELRDKTRSLG 757
Cdd:pfam15685 380 RRRAAALSG----PWGSPPPPPGKAHPIPGPRRPAPA---LLAPPMFIFPAPTNGEPVRPGPPAPQALLPRPPPPTPPAT 452

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 141796917  758 RAEKPPP-PQKAKRSVLPAATVRTASASEASGS-EKAAASAPAPETPRKKTPIQKPPRKKSREAAGEPSRA 826
Cdd:pfam15685 453 PPPVPPPiPQLPALQPMPLAAARPPTPRPCPGHgESALAPAPTAPLPPALAADQAPAPALAAAPAPSPAPA 523
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
678-833 7.65e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 39.86  E-value: 7.65e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 678 RKAAPSPSGRKRTPSNSSVQPPGLTEEAPGPASPTPP-------RARARGRGLGLSEPTDAggpPRSAPEAASMLAAElr 750
Cdd:PRK12323 393 AAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPApealaaaRQASARGPGGAPAPAPA---PAAAPAAAARPAAA-- 467

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917 751 dKTRSLGRAEKPPPPQKAKRSVLPAATVRT----------------ASASEASGSEKAAASAPAPETPRKKTPIQKPPRK 814
Cdd:PRK12323 468 -GPRPVAAAAAAAPARAAPAAAPAPADDDPppweelppefaspapaQPDAAPAGWVAESIPDPATADPDDAFETLAPAPA 546

                        170       180
                 ....*....|....*....|...
gi 141796917 815 KS----REAAGEPSRAGTAPGAS 833
Cdd:PRK12323 547 AApaprAAAATEPVVAPRPPRAS 569
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 759-830 7.90e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 39.87  E-value: 7.90e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 141796917  759 AEKPPPPQKAKRSVLPAATVRTASASEASGSEKAAASAPAPETPRKKTPIQKPPRKKSREAAGEPSRAGTAP 830
Cdd:PRK12270   48 AAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVTP 119
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 677-827 8.28e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 39.77  E-value: 8.28e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 141796917  677 GRKAAPSPSGRKRTPSNSSVQPPGLTEEAPGPASPTPPRARARGRGLGLSEPTDAGGPPRSAPEAASMLAAelrDKTRSL 756
Cdd:PHA03307  778 AEPQRGAGSSPPVRAEAAFRRPGRLRRSGPAADAASRTASKRKSRSHTPDGGSESSGPARPPGAAARPPPA---RSSESS 854

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 141796917  757 GRAEKPPPPQKAKRSVLPAATVRTASASEASGSEKAAASAPAPETPRKKTPIQKPPRKKSREAAGEPSRAG 827
Cdd:PHA03307  855 KSKPAAAGGRARGKNGRRRPRPPEPRARPGAAAPPKAAAAAPPAGAPAPRPRPAPRVKLGPMPPGGPDPRG 925
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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