|
Name |
Accession |
Description |
Interval |
E-value |
| ND2 |
MTH00105 |
NADH dehydrogenase subunit 2; Provisional |
1-334 |
7.68e-157 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177167 [Multi-domain] Cd Length: 347 Bit Score: 443.13 E-value: 7.68e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 1 MNPLAHLIISFTILTGTVITILSSHWFLAWMGLELNMLAIVPILAKSTNPRSTEASTKYFLIQATASMLLLVSIFLNNLL 80
Cdd:MTH00105 1 MNPLILIIIYLTLFLGTMITMISSHWLLAWIGLEMNMLAIIPILMKKHNPRSTEAATKYFLTQATASMLLMMAIIINLMY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 81 TQQWTINPPYNQMLSTMMFIALAMKMGMAPLHFWLPEITQGIPLIPAMIILTWQKLAPMSILLQIFPSTNLNLILTISVL 160
Cdd:MTH00105 81 SGQWTITKLTNPTASTLMTIALAMKLGLAPFHFWVPEVTQGIPLSSGMILLTWQKLAPLSILYQISPSINPNLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 161 SIMIGSWGGLNQTQLRKILAYSSITHMGWMMAVLYYDPNITMLTLIIYIFLTISTLMIFYLTSNVTTLSLSHTWNKLAWT 240
Cdd:MTH00105 161 SILIGGWGGLNQTQLRKILAYSSIAHMGWMTAILPYNPTLTLLNLLIYIIMTLTMFMLLMLNSSTTTLSLSHTWNKTPLM 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 241 MPIIPLMMMSLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTLMNLYFYMRLMYYISMTMFPTSNNTKINWQLNYM 320
Cdd:MTH00105 241 TSLILLTLLSLGGLPPLTGFMPKWMIIQELTKNNNIILPTLMAITALLNLYFYMRLIYSTSLTMFPSTNNMKMKWQFENT 320
|
330
....*....|....
gi 1418580802 321 KPMPFLSPLVVSST 334
Cdd:MTH00105 321 KPMTLLPTLIILST 334
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
1-335 |
5.19e-113 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 332.15 E-value: 5.19e-113
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 1 MNPLAHLIISFTILTGTVITILSSHWFLAWMGLELNMLAIVPILAKSTNPRSTEASTKYFLIQATASMLLLVSIFLNNLL 80
Cdd:MTH00135 1 MNPYVLTILLFSLGLGTTLTFASSHWLLAWMGLEINTLAIIPLMAQHHHPRAVEATTKYFLTQATAAAMILFASTTNAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 81 TQQWTINPPYNQMLSTMMFIALAMKMGMAPLHFWLPEITQGIPLIPAMIILTWQKLAPMSILLQIFPsTNLNLILTISVL 160
Cdd:MTH00135 81 TGQWDIQQMSHPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFALILQIAP-TNPTLLITLGLT 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 161 SIMIGSWGGLNQTQLRKILAYSSITHMGWMMAVLYYDPNITMLTLIIYIFLTISTLMIFYLTSNVTTLSLSHTWNKLAWT 240
Cdd:MTH00135 160 STLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFSPSLTLLALLTYIIMTSSAFLTFKLNSSTKINTLATSWTKAPAL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 241 MPIIPLMMMSLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTLMNLYFYMRLMYYISMTMFPTSNNTKINWQLNYM 320
Cdd:MTH00135 240 TALTPLILLSLGGLPPLTGFMPKWLILQELTKQDLPLTATLAALSALLSLYFYLRLSYAMTLTISPNTLNGTTPWRLPST 319
|
330
....*....|....*
gi 1418580802 321 KPMPFLSPLVVSSTC 335
Cdd:MTH00135 320 QLTLPLAISTTATLM 334
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
1-334 |
3.85e-110 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 324.85 E-value: 3.85e-110
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 1 MNPLAHLIISFTILTGTVITILSSHWFLAWMGLELNMLAIVPILAKSTNPRSTEASTKYFLIQATASMLLLVSIFLNNLL 80
Cdd:MTH00112 1 MNPHAKLIITTSLILGTIITISSNHWLMAWTGLEINTLAIIPLISKPHHPRATEAATKYFLTQAAASALILFSSTTNAWN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 81 TQQWTINPPYNQMLSTMMFIALAMKMGMAPLHFWLPEITQGIPLIPAMIILTWQKLAPMSILLQIFPSTNLNLILTISVL 160
Cdd:MTH00112 81 TGQWDITQLTNPTSCTLLTLALAMKLGLAPFHFWLPEVLQGSTTTTALILSTWQKLAPLTLLLMTSNSLNPTLLLTLAIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 161 SIMIGSWGGLNQTQLRKILAYSSITHMGWMMAVLYYDPNITMLTLIIYIFLTISTLMIFYLTSNVTTLSLSHTWNKLAWT 240
Cdd:MTH00112 161 STLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYSPKLTLLTFYIYILMTTPMFLTLNTTSTKTLKDMMTSWTKSPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 241 MPIIPLMMMSLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTLMNLYFYMRLMYYISMTMFPTSNNTKINWQLNyM 320
Cdd:MTH00112 241 NTTLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATIMAMLSLLSLFFYLRLTYISTITLPPNTTNMMMKWRTK-P 319
|
330
....*....|....
gi 1418580802 321 KPMPFLSPLVVSST 334
Cdd:MTH00112 320 KKNTLTATLTTLST 333
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
1-334 |
6.14e-102 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 303.77 E-value: 6.14e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 1 MNPLAHLIISFTILTGTVITILSSHWFLAWMGLELNMLAIVPILAKSTNPRSTEASTKYFLIQATASMLLLVSIFLNNLL 80
Cdd:MTH00070 1 MSPYALSILLSSLALGTMITLSSNHWFLAWMGLEINTLAIIPLMTKTHHPRATEAATKYFLTQASASALILFSSTINAWF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 81 TQQWTINPPYNQMLSTMMFIALAMKMGMAPLHFWLPEITQGIPLIPAMIILTWQKLAPMSILLQIFPSTNLNLILTISVL 160
Cdd:MTH00070 81 TGEWTIMNMQTPLPTIMLTIALMMKLGIAPFHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLNSNLLIIMGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 161 SIMIGSWGGLNQTQLRKILAYSSITHMGWMMAVLYYDPNITMLTLIIYIFLTISTLMIFYLTSNVTTLSLSHTWNKLAWT 240
Cdd:MTH00070 161 STLIGGWGGLNQTQLRKIMAYSSIAHLGWMIIILTFSPHLTLLNLLIYLIMTSSMFLMLMNLNSTNINKLSSSWSKNPTL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 241 MPIIPLMMMSLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTLMNLYFYMRLMYYISMTMFPTSNNTKINWQLNyM 320
Cdd:MTH00070 241 TSMMMLTLLSLGGLPPTTGFIPKWLILQELTKQNLTTLATLMALSALLSLFFYLRLSYAMSLTTSPNTSNSKLYWRFK-N 319
|
330
....*....|....
gi 1418580802 321 KPMPFLSPLVVSST 334
Cdd:MTH00070 320 KTNNLLSLTIILSL 333
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
1-315 |
2.34e-86 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 264.10 E-value: 2.34e-86
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 1 MNPLAHLIISFTILTGTVITILSSHWFLAWMGLELNMLAIVPILAKSTNPRSTEASTKYFLIQATASMLLLVSIFLNNLL 80
Cdd:MTH00041 1 MNRNVLIFLITSIILGTIIVISSNHWFLIWLGLELNTLSIIPILSSNFSPRSVEATIKYFLVQAFSAAILLNGALIQAWL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 81 TQQWTINPPYNQMLSTMMFIALAMKMGMAPLHFWLPEITQGIPLIPAMIILTWQKLAPMSILLQIFPSTNLNLILTISVL 160
Cdd:MTH00041 81 SGSWSINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLISISNLLNSNILILCGIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 161 SIMIGSWGGLNQTQLRKILAYSSITHMGWMMAVLYYDPNITMLTLIIYIFLTISTLMIFYLTSNVTTLSLSHTWNKLAWT 240
Cdd:MTH00041 161 SVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYSPNASIIMFLIYIIINTSIFLIGNNFSLSTLSHLNKLSQLNPIS 240
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1418580802 241 MPIIPLMMMSLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTLMNLYFYMRLMYYISMTMFPTSNNTKINW 315
Cdd:MTH00041 241 AFLFILSILSLGGLPPLTGFLNKFISLYCLIQNNSILISIILIIGSLLSLFFYLRISFNTSLTLFPQHSISLFSW 315
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
1-329 |
1.86e-80 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 249.12 E-value: 1.86e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 1 MNPLAHLIISFTILTGTVITILSSHWFLAWMGLELNMLAIVPILAKSTNPRSTEASTKYFLIQATASMLLLVSIFLNNLL 80
Cdd:MTH00200 1 MSPLILPLFILSLGLGTLLTFSSSHWFLIWLGLEINTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 81 TQQWTINPPYNQMLSTMMFIALAMKMGMAPLHFWLPEITQGIPLIPAMIILTWQKLAPMSILLQIFPSTNLNLILTISVL 160
Cdd:MTH00200 81 SGQWGISEMLGPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNILLLLGLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 161 SIMIGSWGGLNQTQLRKILAYSSITHMGWMMAVLYYDPNITMLTLIIYIFLTISTLMIFYLTSNVTTLSLSHTWNKLAWT 240
Cdd:MTH00200 161 SVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYSPNLALLYLLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 241 MPIIPLMMMSLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTLMNLYFYMRLMYYISMTMFPTSNNTKINWQL--N 318
Cdd:MTH00200 241 SMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTksN 320
|
330
....*....|.
gi 1418580802 319 YMKPMPFLSPL 329
Cdd:MTH00200 321 SNLLVGLLLLL 331
|
|
| ND2 |
MTH00160 |
NADH dehydrogenase subunit 2; Provisional |
1-329 |
6.31e-55 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214442 [Multi-domain] Cd Length: 335 Bit Score: 182.72 E-value: 6.31e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 1 MNPLAHLIISFTILTGTVITILSSHWFLAWMGLELNMLAIVPILAKSTNPRSTEASTKYFLIQATASMLLLVSIFLNNLL 80
Cdd:MTH00160 2 MMNSSKLLFLSTLIMGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLMSSESSLKYFLIQALASIILLFSIILNMLN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 81 tqqwtiNPPYNQMLSTMMFIALAMKMGMAPLHFWLPEITQGIPLIPAMIILTWQKLAPMSILLQIFpstNLNLILTISVL 160
Cdd:MTH00160 82 ------LMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLI---NNNFIIIIIIL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 161 SIMIGSWGGLNQTQLRKILAYSSITHMGWMMAVLYYDPNITMLTLIIYIFLTISTLMIFYLTSNVTTLSLSHTWNKLAWT 240
Cdd:MTH00160 153 SAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIYFLIYSIISLSIILLFNKFNIFFLNQLFNSNNKSKKI 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 241 MPIIPLMMMSLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTLMNLYFYMRLMYYISMTMFPTSNNTKINWQLNYM 320
Cdd:MTH00160 233 KFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFLLFILIMSSLITLYFYLRISYSSLMLNYNKNKWNLKKKKNKFS 312
|
....*....
gi 1418580802 321 KPMPFLSPL 329
Cdd:MTH00160 313 LILNFLSFI 321
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
11-315 |
1.48e-52 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 176.23 E-value: 1.48e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 11 FTILTGTVITILSSHWFLAWMGLELNMLAIVPILAKSTNPRSTEASTKYFLIQATASMLLLVSIFLnnlltqqwTINPPY 90
Cdd:MTH00144 11 FLMVMGTLLSLSSSHWLGVWVGLEINLIGFLPLLVYKKKSSESESVVKYFIIQSLGSSLLIFGSLI--------MYNLSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 91 NQMLSTMMFIALAMKMGMAPLHFWLPEITQGIPLIPAMIILTWQKLAPMSILLQIFPSTNL-NLILTISVLSIMIGSWGG 169
Cdd:MTH00144 83 SWFSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLLSNFLDLYWLaYLLCVISVLSALVGSIGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 170 LNQTQLRKILAYSSITHMGWMMAVLYYDPNITMLTLIIYIFLTISTLMIFYLTSNVTTLSLSHTWNKLAWTMpIIPLMMM 249
Cdd:MTH00144 163 LNQTQVRALLAYSSISHTGWMLVAILHGSWLMWMYFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGL-SIISLLL 241
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1418580802 250 SLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTLMNLYFY--MRLMYYISMTMFPTSNNTKINW 315
Cdd:MTH00144 242 SLGGLPPFLGFCSKLLVLISSMESSPLLLILLLLLGSLISLFFYlsVFFSSFLSSSKSKKSNSSKVLN 309
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
7-312 |
5.88e-47 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 161.87 E-value: 5.88e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 7 LIISFTILTGTVITILSSHWFLAWMGLELNMLAIVPILAKSTNPRSTEASTKYFLIQATASMLLLVSiflnnlLTQQWTI 86
Cdd:MTH00011 9 FLFSSTMTLGTLMALSSNNWLFLWMGMELNLLSFVPLMTSSKMNQESEAAVKYFLAQALGSGLLLLG------MTMMWSF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 87 NPPYNQMLSTMMFIALAMKMGMAPLHFWLPEITQGIPLIPAMIILTWQKLAPMSILLQIFPSTNLNLILTISVLSIMIGS 166
Cdd:MTH00011 83 PSLLKNITALMLLVSLMLKLGMAPCHFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTSMAAMSALAGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 167 WGGLNQTQLRKILAYSSITHMGWMMAVLYYDPNITMLTLIIYIFLTISTLMIFYLTSNVTTLSLSHTWNKLAWTMPIIPL 246
Cdd:MTH00011 163 LGGMNQTQLRPLLAYSSIGHMGWMTMISVFSPSMAILYFMTYIIITTPLMLLFAYLNAFSTKFNSKISSMSQTTSMSLFI 242
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1418580802 247 MMMSLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTLMNLYFYMRLMYYiSMTMFPTSNNTK 312
Cdd:MTH00011 243 MLLSLGGLPPFTGFMPKLMAIETLTSNSMILILLVLIVGSLMNLFYYLNLIFN-FMYLSPTFSSLK 307
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
8-321 |
1.36e-42 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 150.21 E-value: 1.36e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 8 IISFTILTGTVITILSSHWFLAWMGLELNMLAIVPILAKSTNPRSTEASTKYFLIQATASMLLLVSIFLNNLltqqwtiN 87
Cdd:MTH00197 2 LFLFIIFGGVLFSLSSSNWFLVWIGMELNLIGFIPLLSQNKSITENEGAMKYFLFQEFGSALLLMGGSLSFS-------N 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 88 PPYNQMLSTMMFIALAMKMGMAPLHFWLPEITQGIPLIPAMIILTWQKLAPMSILlqIFPSTNLNLILTISVLSIMIGSW 167
Cdd:MTH00197 75 LYLSLLSVVLVILGLLLKLGAFPFHFWVPSVMESLSWFNCFLLATWQKLAPLLIL--AFNSSSFMGLLICSVLSSLIGGI 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 168 GGLNQTQLRKILAYSSITHMGWMMAVLYYDPNITMLTLIIYIFLTISTLMIFYLTSNVTTLSLSHTWNKLAWTMPIIPLM 247
Cdd:MTH00197 153 GGMNQSNIRQLLAYSSIGHTGWMLMSLVYSPSIFMLYYLIYFVIMFMLFLFLSKNNLSSLNQQYSNPESMSSNLVFLGLS 232
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1418580802 248 MMSLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTLMNLYFYMRLMYYISMTMFPTSNNTKINWQLNYMK 321
Cdd:MTH00197 233 FLSLGGLPPLSGFFLKWLILTSLLSSNISLITFMLILSTCFSLYYYLSLAYKSLILSNWMINFLMKINLLYSGL 306
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
23-268 |
8.62e-29 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 112.79 E-value: 8.62e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 23 SSHWFLAWMGLELNMLAIVPILA-KSTNPRSTEASTKYFLIQATASMLLLVSIFL-----------NNLLTQQWTINPPY 90
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGyWGKSPRSSEAGMKYFLLTLLGSSILLFGISLmynytgtlsfdELSKALTGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 91 NQMLSTMMFIALAMKMGMAPLHFWLPEITQGIPLIPAMIIL-TWQKLAP-----MSILLQIFPSTNLNLILTISVLSIMI 164
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAaTLVKAGGyglirRSLLYLPSSPFIQQILLILAIISMLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 165 GSWGGLNQTQLRKILAYSSITHMGWMMAVLYYDPNITMLTLIIYIFLTISTLMIFYLTSNVTTLSLSHTWN-----KLAW 239
Cdd:pfam00361 161 GSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNirdygGLAK 240
|
250 260 270
....*....|....*....|....*....|...
gi 1418580802 240 TMPIIPL----MMMSLGGLPPLTGFSPKWAIMQ 268
Cdd:pfam00361 241 TMPILALvflvAMLSLAGLPPTAGFLGKFLILA 273
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
8-300 |
1.19e-28 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 115.21 E-value: 1.19e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 8 IISFTILTGTVITILSSHWFLAWMGLELNMLAIVpILA--KSTNPRSTEASTKYFLIQATASMLLLVSIFLNNLLT---- 81
Cdd:COG1007 106 ALLLFATLGMMLMASANDLLTLFLGLELLSLSLY-VLVafRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATgsln 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 82 --------QQWTINPPYNQMLSTMMFIALAMKMGMAPLHFWLPEITQGIPLIPAMIILTWQKLAPMSILLQIF------- 146
Cdd:COG1007 185 lagiaaalAAGGANSPLLLLGLVLVLAGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAALLRLLveafpgl 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 147 PSTNLNLILTISVLSIMIGSWGGLNQTQLRKILAYSSITHMGWMM------------AVLYYdpnitmltLIIYIFLTIS 214
Cdd:COG1007 265 AADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLlglaagtplgvsAALFY--------LLAYLFMNLG 336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 215 T-LMIFYLTSNVT-TLSLSHtWNKLAWTMPIIPLMMM----SLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTLM 288
Cdd:COG1007 337 AfAVILLLSRKGGeAEEIED-LAGLARRSPLLALAMTifllSLAGIPPTAGFFGKFYVFSAAVEAGLYWLAVIAVLNSVI 415
|
330
....*....|..
gi 1418580802 289 NLYFYMRLMYYI 300
Cdd:COG1007 416 SAYYYLRVVKAM 427
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
11-300 |
6.17e-25 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 104.90 E-value: 6.17e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 11 FTILtGTVITILSSHWFLAWMGLELNMLAIVPILA-KSTNPRSTEASTKYFLIQATASMLLLVSIFLNNLLT-------- 81
Cdd:PRK05777 111 FALL-GMMVMVSANDLLTLFLGLELLSLPLYALAAlRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATgslsfagi 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 82 -QQWTINPPYNQMLST---MMFIALAMKMGMAPLHFWLPEITQGIPLIPAMIILTWQKLAPMSILLQIF-------PSTN 150
Cdd:PRK05777 190 aKALADGSGNSLLLLFglvFLLVGLAFKLSAVPFHMWTPDVYEGAPTPVTAFLATAPKIAAFAVLLRLLvvafgglSEDW 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 151 LNLILTISVLSIMIGSWGGLNQTQLRKILAYSSITHMGWMMAVLYYDPNI----TMLTLIIYIFLTIST----LMIFYLT 222
Cdd:PRK05777 270 QQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEgysaVLFYLLAYLFMTLGAfgviSLLRRKG 349
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 223 SNVTTLSlshTWNKLAWTMP----IIPLMMMSLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTLMNLYFYMRLMY 298
Cdd:PRK05777 350 GEAESIS---DFAGLSKRSPllaaVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGLWWLAVIGVLNSAIGAFYYLRVIK 426
|
..
gi 1418580802 299 YI 300
Cdd:PRK05777 427 LM 428
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
8-300 |
2.56e-24 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 103.17 E-value: 2.56e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 8 IISFTILTGTVITILSSHWFLAWMGLELNMLAIVPILA-KSTNPRSTEASTKYFLIQATASMLLLVSIFLNNLLTQQWTI 86
Cdd:MTH00199 101 ILILIVALGSLLLVSSINWLSIYLAIELQTLTLFILVAlKRDSAYSTEAGLKYFVLGAVSSGLFLFGCALLYGLTGETSI 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 87 NPpYNQMLS-----TMMFIALAMKMGMAPLHFWLPEITQGIPLIPAMIILTWQKLAPMSILLQIFPSTNLnlILTISVLS 161
Cdd:MTH00199 181 QG-INSILTgdvgkILITISLLFKLSAAPFHMWAPDVYEGAPTITTALLATVPKIGVFSILVQIGPVTNV--VLICAVLS 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 162 IMIGSWGGLNQTQLRKILAYSSITHMGWMMAVLYYDPN----ITMLTLIIYIFLTI---STLMIFYLTSN--VTTLSLSH 232
Cdd:MTH00199 258 IIYGAIGALNQTKIKRLLAYSGIGHMGFILFGVAIGSFesiqASLIYMIIYVIMSIcsfSIILSLKLTKGliVEVSGLSR 337
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1418580802 233 TWNKLAWTMpiiPLMMMSLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTLMNLYFYMRLMYYI 300
Cdd:MTH00199 338 KNPVIALTL---ALTFLSIAGIPPLAGFLSKWLILLSGVSSGYYLICIIAVLSSVIAGVYYVRVVQII 402
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
13-313 |
3.91e-24 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 102.72 E-value: 3.91e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 13 ILTGTVITILSSHWFLAWMGLELNMLAIVPILA-KSTNPRSTEASTKYFLIQATASMLLLV----------SIFLNNLLT 81
Cdd:TIGR01770 111 ALLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGlKRKSRFSTEAGLKYFILGAFSSGLLLFgisliygftgSLNFEDLLL 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 82 QQ--WTINPPYNQMLSTMMFIALAMKMGMAPLHFWLPEITQGIPLIPAMIILTWQKLAPMSILLQIFPS-------TNLN 152
Cdd:TIGR01770 191 FLsnGMLNISLLLLGIVLILVGLLFKLSAVPFHMWVPDVYEGAPTPVTAFFSIVPKIAIFAVFLRLFLYilfgfseAWQI 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 153 LILTISVLSIMIGSWGGLNQTQLRKILAYSSITHMGWMMAVLYYDPNITMLTLIIYIFL-TISTLMIFylTSNVTTLSLS 231
Cdd:TIGR01770 271 FLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIGLLAGTLEGIKAVLFYIFIyALMSLGAF--GVLSLLRSYK 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 232 HTWNK-------LAWTMPIIP----LMMMSLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTLMNLYFYMRlmyyI 300
Cdd:TIGR01770 349 DEWIEyisdfagLFKTNPILAililIFMFSLAGIPPLAGFFGKFYVFFALLKSGLYWLAVIAVLTSVIGAFYYLR----V 424
|
330
....*....|...
gi 1418580802 301 SMTMFPTSNNTKI 313
Cdd:TIGR01770 425 VKVMYFDKPERRI 437
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
13-321 |
7.21e-24 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 100.49 E-value: 7.21e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 13 ILTGTVITILSSHWFLAWMGLELNMLAIVPILAKSTNP-RSTEASTKYFLIQATASMLLLVSI-------------FLNN 78
Cdd:MTH00196 2 VALGILCLISSSNWLSVYLAIELQTLSLFILIAQNRGSgYSAEAGLKYFVLGALSSGLFLFGCallcgttgglhlsYINL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 79 LLTQQWTINPPYNQMLSTMMFIALAMKMGMAPLHFWLPEITQGIPLIPAMIILTWQKLAPMSILLQIFPSTNLNLILTIs 158
Cdd:MTH00196 82 VLNSGQSFSSVSVPIGYLLIIVALLFKLSVAPFHMWAPDVYEGAPTKTTALLAIVPKLGIFSILVSIGLNVNILLIGGL- 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 159 vLSIMIGSWGGLNQTQLRKILAYSSITHMGWMMAVL----YYDPNITMLTLIIYIFLTISTLMIFYLTSNVTTL-----S 229
Cdd:MTH00196 161 -FSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIeigsFESIQASLVYLFIYIIMSICVFSIILALNVYKNLiiefsG 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 230 LSHTWNKLAWTMpiiPLMMMSLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTLMNLYFYMRL---MYYISMTMFP 306
Cdd:MTH00196 240 LSRRLPILAITL---ALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYLIFLLAVFCSVIAGVYYVRIvkiLFFQANSFLL 316
|
330
....*....|....*.
gi 1418580802 307 TSNNT-KINWQLNYMK 321
Cdd:MTH00196 317 ISTKIlKKENKINLRK 332
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
14-301 |
1.57e-23 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 100.61 E-value: 1.57e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 14 LTGTVITILSSHWFLAWMGLELNMLAIVPILAKSTNPRSTEASTKYFLIQATASMLLLVSIFL----------NNLLTQQ 83
Cdd:COG0651 117 LAGMNGAFLTGDLFNLFVFFEVMLLASYGLVALGGTKEALRAGLKYLILNLVGSALFLLGVGLlygatgtlnmADLAARL 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 84 WTINPPYNQMLSTMMFIALAMKMGMAPLHFWLPEI-TQGIPLIPAMI--ILTwqKLAPMSIL---LQIFPSTNLN----L 153
Cdd:COG0651 197 AELDPGLLLAAFALLLVGFGIKAALFPLHFWLPDAyPAAPSPVSALLsgLLT--KVGVYAILrvlTLLFGADPALflgtL 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 154 ILTISVLSIMIGSWGGLNQTQLRKILAYSSITHMGWMMAVLYYDPNITMLTLIIYIF---LTISTLmiFYLTSNVTTLSL 230
Cdd:COG0651 275 LLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLnhaLAKALL--FLAAGAIERATG 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1418580802 231 SHTWNK---LAWTMPIIPLMM----MSLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTLMNLYFYMRLMYYIS 301
Cdd:COG0651 353 TRDLDKlggLGKRMPLTAAAFligaLALAGLPPLSGFVSKWLLLQAALEAGAWLLAAVLLLSSLLTLAYFVRIFGRAQ 430
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-300 |
1.69e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 71.06 E-value: 1.69e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 33 LELNMLAIVPILAKSTNPRSTEASTKYFLIQATASMLLLVSIFLNNLLTQqwTIN-------PPYNQMLST---MMFIAL 102
Cdd:PRK08375 135 LEIMSLSSYALVAMGGDRRALAAARKYLIVGLIGSTFLLIGVGLLYGVTG--TLNmadlagaLAENPTVVTafgFVLLAL 212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 103 AMKMGMAPLHFWLPE-ITQGIPLIPAMIILTWQKLAPMSILLQIF---------PSTNLNLILTISVLSIMIGSWGGLNQ 172
Cdd:PRK08375 213 ALKAAVFPLHTWLPRaYPAAPPVVTALLSGLVTKVAVYALIRIYFtvfggdfrfALGLGWLLAVLALLSMLVGSLAALGQ 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 173 TQLRKILAYSSITHMGWMMAVLYYDPNITMLTLIIYIF---LTISTLM----IFYLTSNVTTLS-LSHTWNKLAWTMPII 244
Cdd:PRK08375 293 DDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLhhaLMKGALFlaagAIEVTYGTRRLSeLSGLGRRMPLTAAAF 372
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 1418580802 245 PLMMMSLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTLMNLYFYMRLMYYI 300
Cdd:PRK08375 373 AVASLSLIGVPPTSGFVSKWYLVVGAVEAGQWLVLAVLLASSLLALLYFLRIWYRA 428
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
16-300 |
4.55e-13 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 69.89 E-value: 4.55e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 16 GTVITILSSHWFLAWMGLELNMLAIVPILAKSTNPRST---------EASTKYFLIQATASMLLLVSIFLNNLLTQQW-- 84
Cdd:MTH00198 200 GGLLLIESANWLTIYLALEFQTLALFILAGEGSQPGSHfpspgntppESGLKYWILGAMSSGFYLFGCALYFGFTGNEgm 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 85 ----------TINPPYNQMLSTMMFIALAM--KMGMAPLHFWLPEITQGIPLIPAMIILTWQKLAPMSILLQIFPSTNLn 152
Cdd:MTH00198 280 lgtilsatleTTNIELRQGSLGYLFITVAIlfKLAAAPFHMWTPDVYEGAPTPTTALIAIIPKFTVYILLTSLVITSKL- 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 153 lILTISVLSIMIGSWGGLNQTQLRKILAYSSITHMG-----------------WMMAVLYYDPNITMLTLIIYI--FLTI 213
Cdd:MTH00198 359 -LLSVAIISLVVGAFGALNQTRIKRLLAYSGIGHIGfiligvsagtyeslqasWTYAVTYLVSALASFTVICTLeeFGTR 437
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 214 ST--------LMIFYLTSNVTTLS-LSHTWNKLAWTMPIIplmMMSLGGLPPLTGFSPKWAIMQELIK---NDNLIIPLM 281
Cdd:MTH00198 438 TPtsrqrdgsFGNYNLVRRLVDLTiLSRGQPYIAFSLAIV---FLSLAGIPPLLGFLGKWFILVGSIKiafSSSLSIYYL 514
|
330 340
....*....|....*....|...
gi 1418580802 282 MALL----TLMNLYFYMRLMYYI 300
Cdd:MTH00198 515 VALFaiicTCISAFYYIRIVATI 537
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
55-191 |
2.78e-11 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 64.19 E-value: 2.78e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 55 ASTKYFLIQATASMLLLVSIF-----------LNNLLTQQwtINPPYNQMLSTMMFIALAMKMGMAPLHFWLPEI-TQGI 122
Cdd:TIGR01972 157 AAMKFFLYTLAGSLLMLLAILglyflgggtfdLLELLNLP--LPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAhVEAP 234
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1418580802 123 PLIPAMIILTWQKLAP---MSILLQIFPSTNLN---LILTISVLSIMIGSWGGLNQTQLRKILAYSSITHMGWMM 191
Cdd:TIGR01972 235 TAGSVILAGVLLKMGTygfLRFNLPLFPDASLYfapVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVL 309
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
33-266 |
3.23e-11 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 64.35 E-value: 3.23e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 33 LELNMLAIVPILA-KSTNPRSTEASTKYFLIQATASMLLLVSIFL-----NNL----LTQQWTINPPYNQMLSTMMFIA- 101
Cdd:PRK08376 150 LEIMSIASYALVAfRNDTWEAIEAGIKYMFVGSLASSMVLLGIALlygqyGTLnmayLAVKMSENPTVVAKIALALFIAg 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 102 LAMKMGMAPLHFWLPEITQGIPL-IPAMIILTWQK--LAPMSILLQIF-PSTNLN----LILTISVLSIMIGSWGGLNQT 173
Cdd:PRK08376 230 LAMKSGAVPVHMWLPDAYPAAPSsISAMLLVIKQAglYALARVLFSIYgPAINLAtvgwVIIILGCLTMFVGVAMAVVQK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 174 QLRKILAYSSITHMGWMM------AVLYYDPNIT---MLTLIIYIFLTISTLMI---FYLTSNVTTLSLShTWN-----K 236
Cdd:PRK08376 310 DVKRLLAYHSVSQIGYMLlglgvgLAALGDPAMAsygEIALAGGIYHIVNHALYkalLFLTAGAVIYETG-TRNlnelgG 388
|
250 260 270
....*....|....*....|....*....|....
gi 1418580802 237 LAWTMPIIPLMMM----SLGGLPPLTGFSPKWAI 266
Cdd:PRK08376 389 LARTMPKTTIAFLigaaAIVGLPPFNGFASKWLI 422
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
55-192 |
1.10e-10 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 62.41 E-value: 1.10e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 55 ASTKYFLIQATASMLLLVSIFLNNLLTQQWTIN---------PPYNQMLS-TMMFIALAMKMGMAPLHFWLP----EITQ 120
Cdd:COG1008 162 AAIKFFLYTLAGSLLMLVAILALYFLAGALTFDiaelaaaplPLTAQLLLfLAFFIAFAVKVPMFPFHTWLPdahvEAPT 241
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1418580802 121 GIPLIPAMIILtwqKLAPMSIL---LQIFP---STNLNLILTISVLSIMIGSWGGLNQTQLRKILAYSSITHMGWMMA 192
Cdd:COG1008 242 AGSVLLAGVLL---KMGGYGLLrfaLPLFPeasAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLL 316
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
51-260 |
4.27e-10 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 60.79 E-value: 4.27e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 51 RSTEASTKYFLIQATASMLLLVSI---------------FLNNLLTQQWTiNPPYNQMLSTMMFIALAMKMGMAPLHFWL 115
Cdd:CHL00049 159 RSNEATMKYLLMGGASSSILVYGFswlyglsggeielqeIVNGLINTQMY-NSPGISIALIFITVGIGFKLSLAPFHQWT 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 116 PEITQGIPLIPAMIILTWQKLAPMS----ILLQIFP--STNLNLILTI-SVLSIMIGSWGGLNQTQLRKILAYSSITHMG 188
Cdd:CHL00049 238 PDVYEGSPTPVVAFLSVTSKVAASAlatrIFDIPFYfsSNEWHLLLEIlAILSMILGNLIAITQTSMKRMLAYSSIGQIG 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 189 WMM-AVLYYDPNI---TMLT-LIIYIFLTISTL---MIFYL---TSNVTTLSLSHTwnKLAWTMPIIPLMMMSLGGLPPL 257
Cdd:CHL00049 318 YVIiGIIVGDSNDgyaSMITyMLFYIFMNLGTFaciVLFGLrtgTDNIRDYAGLYT--KDPFLALSLALCLLSLGGIPPL 395
|
...
gi 1418580802 258 TGF 260
Cdd:CHL00049 396 AGF 398
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
49-323 |
3.16e-09 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 58.14 E-value: 3.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 49 NPRSTEASTKYFLIQATASMLLL--VSIF--LNNLLTQQWTINPPYNQMLSTMMFIAL-------AMKMGMAPLHFWLPE 117
Cdd:PRK02504 156 DPRSNEAALKYLLIGAASSAIFLygSSLLygLSGGSTQLSAIALALITSPSLGLALALvfviagiAFKISAVPFHQWTPD 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 118 ITQGIPlIPAMIILTWQKLAP-----MSILLQIFPS--TNLNLILTI-SVLSIMIGSWGGLNQTQLRKILAYSSITHMGW 189
Cdd:PRK02504 236 VYEGSP-TPVVAFLSVGSKAAgfalaIRLLVTAFPSfdEQWKLLFTAlAILSMVLGNVVALAQTSMKRMLAYSSIGQAGF 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 190 MM------------AVLYYdpnitmltLIIYIFLTISTLMIFYLTSNVTTLSLSHTWNKLAWTMPIIPL----MMMSLGG 253
Cdd:PRK02504 315 VMiglvagteagyaSMVFY--------LLAYLFMNLGAFACVILFSLRTGTDQISDYAGLYQKDPLLTLglslCLLSLGG 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 254 LPPLTGFSPK----WAIMQeliknDNLIIPLMMALLT-LMNLYFYMRLmyyISMTMFP--------TSNNTKINWQLNYM 320
Cdd:PRK02504 387 IPPLAGFFGKiylfWAGWQ-----AGLYLLVLVGLVTsVISIYYYIRV---IKMMVVKepqemsdvVKNYPEINWNLPGM 458
|
...
gi 1418580802 321 KPM 323
Cdd:PRK02504 459 RPL 461
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
27-191 |
1.91e-08 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 55.42 E-value: 1.91e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 27 FLAWmglELNMLAIVPILAKSTNPRSTEASTKYFLIQATASMLLLVSIFLNNLLTQQWTIN---------PPYNQMLSTM 97
Cdd:PRK12561 113 FLMW---ELELVPVYLLISIWGGQKRLYAATKFILYTALASIFILVAGLALALSGDTFTFDlaelgaksyPLALELLLYA 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 98 MF-IALAMKMGMAPLHFWLP----EITQGIPLIPAMIILTWQKLAPMSILLQIFPSTNLNLILTISVLSIMIGSWGGLN- 171
Cdd:PRK12561 190 GFlIAFGVKLPIFPLHTWLPdahgEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAILGVVNIIYGALNa 269
|
170 180
....*....|....*....|..
gi 1418580802 172 --QTQLRKILAYSSITHMGWMM 191
Cdd:PRK12561 270 faQDNVKRRLAYSSVSHMGFVL 291
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
55-191 |
3.78e-08 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 54.82 E-value: 3.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 55 ASTKYFLIQATASMLLLVSIFLNNLLTQQWTINPPYNQMLSTMM------------FIALAMKMGMAPLHFWLP----EI 118
Cdd:PRK05846 162 AATKFFLYTLLGSLLMLVAIIYLVVVYYNATGTFDIADLLNLPLppgvqywlflafFIAFAVKMPMFPLHTWLPdahvQA 241
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1418580802 119 TQGIPLIPAMIILTWQKLAPMSILLQIFPSTNLN---LILTISVLSIMIGSWGGLNQTQLRKILAYSSITHMGWMM 191
Cdd:PRK05846 242 PTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEfapIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVT 317
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
3-268 |
6.88e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 53.82 E-value: 6.88e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 3 PLAHLIISFTILT-GTVITILSSHWFLAWMGLELNMLAIVPILAKSTNPRSTEASTKYFLIQATASMLLLVSIFLNNLLT 81
Cdd:PRK12665 109 PVSIFLPTYLILVaGVSNAFLAGDLFNLYVGFEILLVASYVLLTLGATAARVRAGVTYVMVSMVSSLLFLIGIALVYAAT 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 82 QqwTIN-----------PPYNQM-LSTMMFIALAMKMGMAPLHFWLPEitqGIPLIPAMI------ILTwqKLAPMSILL 143
Cdd:PRK12665 189 G--TLNmadlavrldelPSGTRTaLFAVLLVAFGIKAAVFPLSFWLPD---SYPTAPAPVtavfagLLT--KVGVYAIIR 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 144 Q---IFPSTNLN-LILTISVLSIMIGSWGGLNQTQLRKILAYSSITHMGWMM-------------AVLYYDPNITMLTLi 206
Cdd:PRK12665 262 ThtlLFPGGGLDtLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVfgialstvaglsgAIYYVAHHITVQTT- 340
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1418580802 207 iyIFLTISTLMIFYLTSNVTTLSlshtwnKLAWTMPIIPLMM----MSLGGLPPLTGFSPKWAIMQ 268
Cdd:PRK12665 341 --LFLVVGLIERQAGSSSLRRLG------GLAKASPLLAVLFfvpaLNLGGIPPFSGFIGKVALLE 398
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
27-282 |
6.97e-08 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 53.85 E-value: 6.97e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 27 FLAWMGLELNMLAIVPILAKstnpRSTEASTKYFLIQATASMLLLVSIFLNNLLTQQWTI---------NPPYNQMLSTM 97
Cdd:PRK08668 124 YIFWEIMTFSSFMMVPMGKK----ESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFadisqglinDTSTGFALIVF 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 98 MFIALA--MKMGMAPLHFWLPEITQGIP------------------LIPAMIILTWQKLAPMSILLQIFPSTNLNLILtI 157
Cdd:PRK08668 200 LFLLAFgvAKAGIFPLHVWAPDAYSEAPqsfsavlsgqlsklgaygFLLVLYVLPGTKLFSEFGTYRGVPLFNYILAW-L 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 158 SVLSIMIGSWGGLNQTQLRKILAYSSITHMGWMMAVLYYDPNITMLTLIIYIF-LTISTLMIFYLTSNV---TTLSLSHT 233
Cdd:PRK08668 279 GNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHVFnHALFKGLFFLIFAAViyrTGTTKISE 358
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1418580802 234 WNKLAWTMPIIPLM----MMSLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMM 282
Cdd:PRK08668 359 MGGLIEKMPFTFAMylvaIISLAGIPPMSGFASKWLIFEALISKGMPITAFMA 411
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
93-297 |
3.02e-07 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 51.87 E-value: 3.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 93 MLSTMMFIALAMKMGMAPLhFWLPEITQGIPLIPAMI---ILT----WQKLAPMSILLQIFPSTNLNLILTISVLSIMIG 165
Cdd:PRK12663 208 TIALLFLLAFGMKAALFPF-MWLPAAYHTPNTEVAALfaaLLTkvgiYALIRVFTLLFPQERELLHPLLATMAAITMVIG 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 166 SWGGLNQTQLRKILAYSSITHMGWMM-------------AVLYYDPNITMLTLIiyiFLTISTLMifYLTSNVTTLSLSH 232
Cdd:PRK12663 287 ALGALAYKDIRRIAGYQVISSIGFILlglalgtpagingAIFYLVHDMVVKTAL---FLIAGSLV--RLTGYRSLQYLGG 361
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1418580802 233 TWNKLAWTMPIIPLMMMSLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTLMNLYFYMRLM 297
Cdd:PRK12663 362 LYRKEPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDNGAYILLALMLITSLITMYSLFRIF 426
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
50-300 |
5.30e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 51.13 E-value: 5.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 50 PRSTEASTKYFLIQATASMLLLVSIFL----------------NNLLTQQWTINPPYNQMLSTMMFIALAM-----KMGM 108
Cdd:PRK12667 160 GDAVEAAIKYALIGAVGTTLYFLALAFlyatfgtlnmadlsakIRGLSFPLTGGLAGNPPLALGVALALALwaftiKAAI 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 109 APLHFWLPEITQGIPL-IPAM------------IILTWQKLAPMSILLQIFPSTNLNLILTISVLSIMIGSWGGLNQTQL 175
Cdd:PRK12667 240 FPNHFWLPDAHPAAPSpVSAMlsglvvnvgayaIIRFLYTIFGISPSLIDFRAALSPILIILGAVSAIIGALMMVVQKDV 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 176 RKILAYSSITHMGWMMAVLYYDPNITMLTLIIYIFL-TISTLMIFYLTSNVTTLSLSHTWNKLA---WTMPIIPLMM--- 248
Cdd:PRK12667 320 KRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINhAIAKSLLFLASGVFIHAAGTRDIDELAglgRKMPIASFAFlig 399
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 1418580802 249 -MSLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTLMNLYFYMRLMYYI 300
Cdd:PRK12667 400 aLSLVGIPPLNGFFSKLLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSL 452
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
56-296 |
6.38e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 50.72 E-value: 6.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 56 STKYFLIQATASMLLLVSIF-------------LNNLLTQQWTINPPYNQMLSTMMFIALAMKMGMAPLHFWLPEITQGI 122
Cdd:PRK07691 160 SIKYVLINVVSSAFFVVAVAilysvvgtlnmadISVKIAELSAGQTGLITVVAILFLFVFATKAGLFPLYFWLPGSYYAP 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 123 PlipAMIILTWQKL-------APMSILLQIFPST---NLNLILTISVLSIMIGSWGGLNQTQLRKILAYSSITHMGWMMA 192
Cdd:PRK07691 240 P---IAIAALFGALltkvgvyAIARTFTLFFSHDtsfTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILV 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 193 VLYYDPNITMLTLIIYI----------FLTISTLMIFYLTSNVTTLS-LSHTWNKLAWTMPIiplMMMSLGGLPPLTGFS 261
Cdd:PRK07691 317 GVAMMTESGMIGAIYYLihdmivkaalFLLIGIMIKITGTTDLKKMGgLIKRYPVLGWMFFI---AALSLAGIPPLSGFY 393
|
250 260 270
....*....|....*....|....*....|....*
gi 1418580802 262 PKWAIMQELIKNDNLIIPLMMALLTLMNLYFYMRL 296
Cdd:PRK07691 394 GKFFIVEGTFEAGFYVSGIIVLLSSLLVLYSVIKI 428
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
13-191 |
1.84e-06 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 49.37 E-value: 1.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 13 ILTGTVITILSSHWFLAWMGLELNMLAIVPILAKSTNPRSTEASTKYFLIQATASMLLLVSIFLNNLLTQQ--------W 84
Cdd:PRK08676 111 LLSVITFAFFSDNLALFWIFAELTTVFSAMLIAILSARENIDAALKYIFIASTAMIFAFIGLIFLFSLTRQalgtgtlnW 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 85 TINPPYNQMLS--------TMMFIALAMKMGMAPLHFWLPEITQGIP-LIPAMIILTWQKLAPMSIL--------LQIFP 147
Cdd:PRK08676 191 TELAAHASLLSpsvlgasfLFIFIGFLAKSGLVPFHTWLPAAYAKAPsVVSALLSGTVLNIGIYGILrlsallrqSGAAE 270
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 1418580802 148 STNlNLILTISVLSIMIGSWGGLNQTQLRKILAYSSITHMGWMM 191
Cdd:PRK08676 271 QFS-NVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLML 313
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
10-284 |
2.60e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 49.04 E-value: 2.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 10 SFTILTGTVITiLSSHWFLAWMGLELNMLAIVPILAKSTNPRSTEASTKYF-LIQATASMLLLVSIFL-----NNLLTQQ 83
Cdd:PRK06589 123 NLTILIGVLIA-LSSDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLkILMISALLLFLPAVILiytktGNLDFVS 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 84 WTINPPYNQMLSTMMFIALAMKMGMAPLHFWLPEI----TQGIPLIPAMIILTWQKLAPMSILLQIFPSTNLNLILT--- 156
Cdd:PRK06589 202 GGLFSKNQSIILLLMFIYGIAKTAIFPVHSWLPAAmvahYPVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFAefn 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 157 ----ISVLSIMIGSWGGLNQTQLRKILAYSSITHMGWMMAVLYYDPNITMLTLIIYIFL-TISTLMIFYLTSNVTTLS-- 229
Cdd:PRK06589 282 wlifIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVShSFAKICLFYSMGSIYSLKke 361
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 230 -----LSHTWNKLAWTMPIIPLMMMSLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMAL 284
Cdd:PRK06589 362 dqvdkLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVML 421
|
|
| ND2 |
MTH00091 |
NADH dehydrogenase subunit 2; Provisional |
93-315 |
6.28e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177154 Cd Length: 273 Bit Score: 47.17 E-value: 6.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 93 MLSTMMFIALAMKMGMAPLHFWLPEITQGIPLIPAMIILTWQKLAPMSILLQIFPSTNLNLILTISVLSIMigswGGLNQ 172
Cdd:MTH00091 58 SFGYFQFLILMMKIGVAPFHFWIFSVTNGLFGWNLMWFLTFQKLPFLLVLLQFFSKNFFFLLLFGLLICFF----QMFLL 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 173 TQLRKILAYSSITHMGWMMAVLYYDPNITMLTLIIYIFLTISTLMIFYLTSNVTTLSLshtwnklawtmpiipLMMMSLG 252
Cdd:MTH00091 134 KSYKNLLILSSTESFNWLILSFFFSFFNVFFLFFYYFLLMLFLIPKFNNVNKLNFVSW---------------ETLLVFM 198
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1418580802 253 GLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTLMNLYFYMRLMYYISMTMFPTSNNTKINW 315
Cdd:MTH00091 199 NLPFSVTFFVKIFSLSEILKVLGFFLLFLLFLMFLSVLSLSFWLVNLSTKLFLMLFKYNKGFF 261
|
|
| NADH_dehy_S2_C |
pfam06444 |
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region ... |
291-335 |
6.66e-06 |
|
NADH dehydrogenase subunit 2 C-terminus; This family consists of the C-terminal region specific to the eukaryotic NADH dehydrogenase subunit 2 protein and is found in conjunction with pfam00361.
Pssm-ID: 461914 [Multi-domain] Cd Length: 51 Bit Score: 42.63 E-value: 6.66e-06
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 1418580802 291 YFYMRLMYYISMTMFPTSNNTKINWQLNYMKPMPFLSPLVVSSTC 335
Cdd:pfam06444 1 FFYLRLSYSTTLTLFPNTNNSKMKWRFNSTKNTLLLPTLTTLSIL 45
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
26-191 |
1.12e-05 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 47.01 E-value: 1.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 26 WFLAWmglELNMLAIVPILAKSTNPRSTEASTKYFLIQATASMLLLVSIF------------LNNLLTQQWTINppYNQM 93
Cdd:PRK02546 140 FFLAW---ELELIPVYLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALamafygdtptfdMTALAAKDFGLG--FQLL 214
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 94 LSTMMFIALAMKMGMAPLHFWLP----EITQGIPLIPAMIILTWQKLAPMSILLQIFPSTNLN---LILTISVLSIMIGS 166
Cdd:PRK02546 215 CYAGLLIAYGVKLPIVPLHTWLPdahgEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQfapLLIVLGVVNIIYAA 294
|
170 180
....*....|....*....|....*
gi 1418580802 167 WGGLNQTQLRKILAYSSITHMGWMM 191
Cdd:PRK02546 295 LTSFAQRNLKRKIAYSSISHMGFVL 319
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
84-263 |
4.63e-05 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 45.42 E-value: 4.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 84 WTINPPYNQMLSTMMFIALAMKMGMAPLHFWLPEITQGI----------PLIPAMIILtwqkLAPMSILLQIFPSTNLNL 153
Cdd:PRK12650 200 WAEKPGLTTVVAVLIAVAAFTKSAQFPFHFWLPEAMAAItpvsaflhaaAVVKAGIYL----LLRFSPVFHDVAVWNWLL 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 154 IlTISVLSIMIGSWGGLNQTQLRKILAYSSITHMGWMMAVLYYDPNITMLTLIIY----------IFLTIStlMIFYLTS 223
Cdd:PRK12650 276 I-IVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHtlahalfkssLFMLIG--VVDHQAG 352
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1418580802 224 NVTTLSLSHTWNKLAWTMPIIPLMMMSLGGLPPLTGFSPK 263
Cdd:PRK12650 353 TRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSK 392
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
55-191 |
7.49e-05 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 44.32 E-value: 7.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 55 ASTKyFLIQATASMLLLVSIFL-------------NNLLTQQWTINPpyNQMLSTMMFIALAMKMGMAPLHFWLPEI-TQ 120
Cdd:PRK07363 158 ASIK-FLIYTAVSGLLVLAAFLgivwlsgstsfdyDAISTQNLSLNT--QLILLTGLLLGFGIKIPLVPLHTWLPDAyTE 234
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1418580802 121 GIPLIPAMIILTWQKLAPMSIL---LQIFP---STNLNLILTISVLSIMIGSWGGLNQTQLRKILAYSSITHMGWMM 191
Cdd:PRK07363 235 ASPAVAILLGGVLAKLGTYGLLrfgLQLFPqtwSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYIL 311
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
99-188 |
7.73e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 44.27 E-value: 7.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 99 FIALAMKMGMAPLHFWLPEITQGIP----LIPAMIILTWQKLAPMSILLQIFPSTN---LNLILTISVLSIMIGSWGGLN 171
Cdd:MTH00217 213 FLSLAIKIPKIPFHIWLPQAHVEAPvagsVILAGVLLKLGGYGFIRFSWPLLPEASeyfSPLIQTLSLLAIIYGSLTTCR 292
|
90
....*....|....*..
gi 1418580802 172 QTQLRKILAYSSITHMG 188
Cdd:MTH00217 293 QVDLKRIIAYSSVAHMG 309
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
98-260 |
1.01e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 44.14 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 98 MFIALAMKMGMAPLHFWLPEITQGIPL----IPAMIILTWQKLAPMSILLQIFPSTNLNL---ILTISVLSIMIGSWGGL 170
Cdd:MTH00226 236 IFLAMAVKIPIFPFHIWLPKAHVEAPVagsvLLAGILLKLGGYGLVRLSWPILPLGAQNLapaVIAMGIVGIVYGSFATC 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 171 NQTQLRKILAYSSITHMGwMMAVLYYDPNITMLTLIIYIFLT---ISTLMIFYLT--SNVTTLSLSHTWNKLAWTMPI-- 243
Cdd:MTH00226 316 RQIDVKRLVAYSSVAHMG-LVSITLVTHDIIGLTGSIFIMLAhgiVSSLLFILVTilYDRHHTRLIKYYRGLSITMPIwg 394
|
170
....*....|....*....
gi 1418580802 244 IPLMMMSLGGL--PPLTGF 260
Cdd:MTH00226 395 TIMIVTSLANVavPPSGNF 413
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
97-287 |
1.61e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 43.41 E-value: 1.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 97 MMFIALAMKMGMAPLHFWLPEITQGIPLIPAMIILTWQKLAPMSILLQIFP-----STNLNLILTISVLSIMIGSWGGLN 171
Cdd:MTH00032 230 LLLIGCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPlfekaPLTLLIITIFGALTAFFAATVGLV 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 172 QTQLRKILAYSSITHMGWMMAVLYYD--PNITMLTLIIYIFLTistlMIFYLTSNVTTLSLS------HTWNKLAWTMPI 243
Cdd:MTH00032 310 QNDLKKVIAYSTCSQLGYMVLIIGIEgsHNVGLFHLVNHAFFK----ALLFLSAGSVIHSTTvdeqdmRKMGGLIHSIPF 385
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1418580802 244 IPLMMM----SLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTL 287
Cdd:MTH00032 386 TYTMMLigsfSIMGLPYLTGFYSKDLILELTYSGRNMGIPFGSSLLKI 433
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
15-260 |
2.59e-04 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 42.76 E-value: 2.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 15 TGTVITILSSHWFLAWMGLELNMLAIVPILAKSTNPRSTEASTKYFLIQATASMLLLVSIFLNNLLTQQWTINppYNQML 94
Cdd:PRK06473 118 AGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGGQRRGYAATKFLLYTAISGILILVSFLGLVWLSGASSFD--YEPLR 195
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 95 STMM------------FIALAMKMGMAPLHFWLP----EITQGIPLIPAMIILTWQKLAPMSILLQIFPSTNLNL---IL 155
Cdd:PRK06473 196 SHTLplstqllllapiLVGFGIKIPLVPFHTWLPdahvEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVYLapwLA 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 156 TISVLSIMIGSWGGLNQTQLRKILAYSSITHMGWmmaVLYYDPNITMLTLIIYIFLTIS----TLMIFYLTSNVTTLSLS 231
Cdd:PRK06473 276 TWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGY---ILLAAAAATPLSILAAVFQMIShgliSALLFLLVGVVYKKTGS 352
|
250 260 270
....*....|....*....|....*....|....*....
gi 1418580802 232 HTWNKLAWT------MPIIPLMM----MSLGGLPPLTGF 260
Cdd:PRK06473 353 RDVDVLRGLlnpergLPITGSLMilgvMASAGIPGMVGF 391
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
99-188 |
2.99e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 42.36 E-value: 2.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 99 FIALAMKMGMAPLHFWLPEITQGIPL----IPAMIILTWQKLAPMSILLQIFPSTNL---NLILTISVLSIMIGSWGGLN 171
Cdd:MTH00204 216 FLSLAVKIPQIPFHIWLPQAHVEAPVagsvILAGILLKLGGYGFLRFSWPLFPAASEyfaPLIVMLSVIAVIYGSLTTCR 295
|
90
....*....|....*..
gi 1418580802 172 QTQLRKILAYSSITHMG 188
Cdd:MTH00204 296 QVDFKRLIAYSSVAHMG 312
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
110-298 |
3.17e-04 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 42.45 E-value: 3.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 110 PLHFWLPE-----------------ITQGIPLipamiiltwqkLAPMSILLQIFPSTnLNLILTISVLSIMIGSWGGLNQ 172
Cdd:COG1009 229 PLHFWLPDamegptpvsallhaatmVKAGVYL-----------LARLSPLFALSPVW-LTVVAIIGAITALFAALIALAQ 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 173 TQLRKILAYSSITHMGWMMAVLYYD-PNITMLTLIIY------IFLTISTLMIFYLTSNVTTLSlshtwnKLAWTMPIIP 245
Cdd:COG1009 297 TDIKRVLAYSTVSQLGYMFLALGVGaYVAALFHLLTHaffkalLFLGAGSVIHATGTRDIRKMG------GLRKKMPITA 370
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1418580802 246 LMMM----SLGGLPPLTGFSPKWAIMQELIKNDNL-IIPLMMALLTLMNLYFYM-RLMY 298
Cdd:COG1009 371 ITFLigalSLAGIPPFAGFFSKEAILEAALEAGGLgPLLLAVALLGAFLTAFYSfRLFF 429
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
34-300 |
3.92e-04 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 41.94 E-value: 3.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 34 ELNMLAIVPILAKSTNPRSTEASTKYFLIQATASMLLLVSIFLnnLLTQQWTIN----------PPYNQML---STMMFI 100
Cdd:PRK06277 130 EIAAIVQVGLVIASGTEEAYKAALKYMILGNVAGSILLLGIGF--LLASTGTLNitdihnallvNPTSPVIyggLLLLIF 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 101 ALAMKMGMAPLHFWLPEI-TQGIPLIPAMIiLTWQKLAPMSILLQI---------FPSTNLnLILTISVLSIMIGSWGGL 170
Cdd:PRK06277 208 GLLYGSGLPPFHTIKSDIyAKAKPFGSALL-QTFSKFVLVALMLVIfklfgglsyFPSAQG-VLIALSVLAMVFGVVMAL 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 171 NQTQLRKILAYSSITHMGWMMAVLYYDpniTMLTLIIYIFLTISTLMI-------FYLTSNVTTLSLSHTWNKLAWTMPI 243
Cdd:PRK06277 286 LQTDYKRLLAYHAISQGGYVAAGLALG---TPLGIVAGIFHAINHVIYksalflgAGIVSYRTKTSNLRKLGGLLPVMPV 362
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1418580802 244 IPLMMM----SLGGLPPLTGFSPKWAIMQELIKNDNLIIPLMMALLTLMNLYFYMRLMYYI 300
Cdd:PRK06277 363 VAFMVLcaklAISGVPPFNGFQSKLMLAQAAMQANMPELAIIMIIVSIGTFVSMMKAFYLI 423
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
13-188 |
4.36e-04 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 42.06 E-value: 4.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 13 ILTGTVITILSSHWFLAWMGLELNMLAIVPILAKSTNPRSTEASTKYFLIQATASMLLLVSIFL----------NNLLTQ 82
Cdd:PRK08377 117 LMLGATGMIATGDIFNLFVFMEITAITAYALTAYNKTGEAAEASMKYIVLGGIGSSFFLIGVALiygatgtlnmAHIAQL 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 83 QWTINPPYNQMLSTMMFIALAMKMGMAPLHFWLPEITQGIPL-IPAMIILTWQK--LAPMSILLQIFPSTN-----LNLI 154
Cdd:PRK08377 197 AGTIDPTVAQVGLALLIFGLAVEAELFPLNAWAPDAYQAAPHpITVMFSAFVVKagLYAMARILYLMQNANgwssvLKLV 276
|
170 180 190
....*....|....*....|....*....|....
gi 1418580802 155 LTISVLSIMIGSWGGLNQTQLRKILAYSSITHMG 188
Cdd:PRK08377 277 IIMATLTVFFAELSALRQKNVKRMIAYSSIGQVG 310
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
98-272 |
2.54e-03 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 39.72 E-value: 2.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 98 MFIALAMKMGMAPLHFWLPEITQGIPLIPAMIILTWQKLAPMSILLQIFPS---TNL--------NLILTISVLSIMIGS 166
Cdd:PRK12662 215 IMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYLIIRIVYDvfkANFvfttlpfnNVFMILAALAIVFGS 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 167 WGGLNQTQLRKILAYSSITHMGWMMAVLYYDPNITMLTLIIYIF---LTISTLM-----IFYLTSNVTTLSLSHTWNKLA 238
Cdd:PRK12662 295 VLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIVnhsIVKSALFmvsgsISYHFGTTKLEDCLNLWKSMP 374
|
170 180 190
....*....|....*....|....*....|....
gi 1418580802 239 WTMPIIPLMMMSLGGLPPLTGFSPKWAIMQELIK 272
Cdd:PRK12662 375 KITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIK 408
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
110-191 |
5.17e-03 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 38.85 E-value: 5.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 110 PLHFWLPEITQGIPLIPAMI----------ILtwqkLAPMSILLQIFPSTnLNLILTISVLSIMIGSWGGLNQTQLRKIL 179
Cdd:PRK07376 245 PLHVWLPDAMEGPTPISALIhaatmvaagvFL----VARMYPVFEQFPAV-MTVIAWTGAITAFLGASIALTQNDIKKGL 319
|
90
....*....|..
gi 1418580802 180 AYSSITHMGWMM 191
Cdd:PRK07376 320 AYSTISQLGYMV 331
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
48-300 |
7.46e-03 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 38.03 E-value: 7.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 48 TNPRSTEASTKYFLIQATASMLLLVSIFLnnLLTQQWTIN------------PPYNQMLSTMMFIALAMKMGMAPLHFWL 115
Cdd:TIGR01974 159 KKPSANNAAIKAFVVNRVGDFGLLLGIFL--IFWYFGTLNfqevfalapgafFSALTLICLLLFIGAMGKSAQLPLHTWL 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 116 PEITQGiP-----LIPA--MIILTWQKLAPMSILLQIFPsTNLNLILTISVLSIMIGSWGGLNQTQLRKILAYSSITHMG 188
Cdd:TIGR01974 237 PDAMEG-PtpvsaLIHAatMVTAGVYLVARTSPLFELSP-TALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLG 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1418580802 189 WM-MAVLYYDPNITMLTLIIYIFLTistlMIFYLTSNVTTLSLSHTWN-----KLAWTMPIIPLMMM----SLGGLPPLT 258
Cdd:TIGR01974 315 YMfLALGVGAYAAAIFHLMTHAFFK----ALLFLGAGSVIHAMHHEQDirkmgGLRKKMPVTYITFLigslALIGFPGFA 390
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1418580802 259 GFSPKWAIMQELIKNDNLIIPLMMALLTLMNLYFYM-RLMYYI 300
Cdd:TIGR01974 391 GFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSfRLIFMV 433
|
|
| |
