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Conserved domains on  [gi|1466930613|gb|RGM59146|]
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dicarboxylate/amino acid:cation symporter [Bacteroides uniformis]

Protein Classification

dicarboxylate/amino acid:cation symporter( domain architecture ID 10448728)

dicarboxylate/amino acid:cation symporter facilitates H+ or Na+ symport with C4-dicarboxylates, dicarboxylic amino acids (aspartate, glutamate) or other amino acids; belongs to the sodium:dicarboxylate symporter family

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SDF pfam00375
Sodium:dicarboxylate symporter family;
22-381 2.42e-76

Sodium:dicarboxylate symporter family;


:

Pssm-ID: 425646 [Multi-domain]  Cd Length: 388  Bit Score: 241.27  E-value: 2.42e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613  22 FGNFLPASLVRLFVTFNAIFSEFLNFSIPLIIVGLVT-IAIADIGKGAGRMLVFTALIAYGATLFSGFLSYFTGVAVFP- 99
Cdd:pfam00375  15 IGLFFPELAAWLKPLGDLFIRLLKMIIVPLIFASIISgIASLGDGKKLGKLGGKTLLYFLVTTAIAALIGLLVANVFQPg 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 100 ---SLIETGVPLEEVSESQGILPYFSVGIPPLM-------NVMTALVLAFTLGLGLAHL--KSEVLKNAARDFQEIVIRM 167
Cdd:pfam00375  95 sglALIAASLKEAKAAEAPSLLDFILNIIPSNIfealaegNVLAVIVFAILFGIALAALgeKGEPLLNFIESLQEVMMKV 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 168 ISAVILpLLPIYIFGIFLNMTHSgQVFGILMVFIKIIGVIFLLHIFLLVFQYSIAALFV-RKNPLKLLGRMMPAYFTALG 246
Cdd:pfam00375 175 IGWVMK-LAPIGVFALIANTVGT-YGLGILSSLAKFLLVVYLGLAIHLLIVYPLLIKFLgKVNPFKFLKKMLPALLTAFS 252

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 247 TQSSAATIPVTLEQSRKN-GVSADIAGFVIPLCATIHLSGSTLKIVACALALMIMQGMPHDFPLFAGFIFMLGITMVAAP 325
Cdd:pfam00375 253 TASSAATLPVTLECAEKNlGVSESIASFVLPLGATINMDGTAIYLAVAAIFIAQAYGVDLSFGQQLTLVLTATLASIGAA 332

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1466930613 326 GVPGGAIMAsLGILQSMLGFDESAQALMIALYIAMDSFGTACNVTGDGAIALIIDK 381
Cdd:pfam00375 333 GVPGGGLVA-LGLVLSALGLPLEGIALILAIDRLLDMFRTAVNVTGDAAAAVIVAK 387
 
Name Accession Description Interval E-value
SDF pfam00375
Sodium:dicarboxylate symporter family;
22-381 2.42e-76

Sodium:dicarboxylate symporter family;


Pssm-ID: 425646 [Multi-domain]  Cd Length: 388  Bit Score: 241.27  E-value: 2.42e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613  22 FGNFLPASLVRLFVTFNAIFSEFLNFSIPLIIVGLVT-IAIADIGKGAGRMLVFTALIAYGATLFSGFLSYFTGVAVFP- 99
Cdd:pfam00375  15 IGLFFPELAAWLKPLGDLFIRLLKMIIVPLIFASIISgIASLGDGKKLGKLGGKTLLYFLVTTAIAALIGLLVANVFQPg 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 100 ---SLIETGVPLEEVSESQGILPYFSVGIPPLM-------NVMTALVLAFTLGLGLAHL--KSEVLKNAARDFQEIVIRM 167
Cdd:pfam00375  95 sglALIAASLKEAKAAEAPSLLDFILNIIPSNIfealaegNVLAVIVFAILFGIALAALgeKGEPLLNFIESLQEVMMKV 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 168 ISAVILpLLPIYIFGIFLNMTHSgQVFGILMVFIKIIGVIFLLHIFLLVFQYSIAALFV-RKNPLKLLGRMMPAYFTALG 246
Cdd:pfam00375 175 IGWVMK-LAPIGVFALIANTVGT-YGLGILSSLAKFLLVVYLGLAIHLLIVYPLLIKFLgKVNPFKFLKKMLPALLTAFS 252

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 247 TQSSAATIPVTLEQSRKN-GVSADIAGFVIPLCATIHLSGSTLKIVACALALMIMQGMPHDFPLFAGFIFMLGITMVAAP 325
Cdd:pfam00375 253 TASSAATLPVTLECAEKNlGVSESIASFVLPLGATINMDGTAIYLAVAAIFIAQAYGVDLSFGQQLTLVLTATLASIGAA 332

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1466930613 326 GVPGGAIMAsLGILQSMLGFDESAQALMIALYIAMDSFGTACNVTGDGAIALIIDK 381
Cdd:pfam00375 333 GVPGGGLVA-LGLVLSALGLPLEGIALILAIDRLLDMFRTAVNVTGDAAAAVIVAK 387
GltP COG1301
Na+/H+-dicarboxylate symporter [Energy production and conversion];
22-381 1.82e-36

Na+/H+-dicarboxylate symporter [Energy production and conversion];


Pssm-ID: 440912 [Multi-domain]  Cd Length: 406  Bit Score: 136.78  E-value: 1.82e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613  22 FGNFLPASLVRLFVTFNAIFSEFLNFSIPLIIVGLVTIAIADIG--KGAGRMLVFTALIAYGATLFSGFLSYFTGVAVFP 99
Cdd:COG1301    19 LGLLLPELVAAVLKPLGDIFINLLKMIVVPLVFFSIVVGIASLGdlKKLGRIGGKTLLYFLVTTTIALVIGLVVANLFQP 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 100 ----SLIETGVPLEEVSESQGILPYFSVGIPPlmNVMTAL---------VLAFTLGLGLAHL--KSEVLKNAARDFQEIV 164
Cdd:COG1301    99 gaglNLDLADAAAAEAAEAPSLLDFLLNIIPS--NIFEAFaegnmlqiiFFAILFGIALAALgeKGKPLLDFFESLSEVM 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 165 IRMISAVILpLLPIYIFGIFLNMTHSgQVFGILMVFIKIIGVIFL-LHIFLLVFQYSIAALFVRKNPLKLLGRMMPAYFT 243
Cdd:COG1301   177 FKIVGWVMK-LAPIGVFALIAATVAK-YGLDALGSLGKLVLTVYLaLLLHLFVVLPLILRLLTGLSPLKFLRAIRPALLL 254

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 244 ALGTQSSAATIPVTLEQSRKN-GVSADIAGFVIPLCATIHLSGSTLKIVACALALMIMQGMPHDFPLFAGFIFMLGITMV 322
Cdd:COG1301   255 AFSTSSSEATLPVTMEKAEEKlGVSKSVASFVLPLGATINMDGTAIYQAVAALFIAQAYGIDLSLGQQLTIVLTAVLASI 334

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1466930613 323 AAPGVPGGAIMASLGILQSMlGFDESAQALMIALYIAMDSFGTACNVTGDGAIALIIDK 381
Cdd:COG1301   335 GAAGVPGAGLVMLAAVLSAV-GLPLEGIALILGIDRILDMARTAVNVTGDAVATVVVAK 392
PRK13628 PRK13628
serine/threonine transporter SstT; Provisional
 50-330 1.99e-13

serine/threonine transporter SstT; Provisional


Pssm-ID: 184190 [Multi-domain]  Cd Length: 402  Bit Score: 71.05  E-value: 1.99e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613  50 PLIIVGLVTIAIADIGKGAGRMLVfTALIAYgatLFSGFLSYFTGVAV---FPSLIETGVPLEEVSESQGILP-----YF 121
Cdd:PRK13628   57 PILVFVLVMASIANHKKGQKTNIR-PILVLY---LLGTFLAALVAVVAsflFPSTLVLVASAADISPPQGIVEvlktlLL 132

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 122 SVGIPPLMNVMTA---LVLAFTLGLGLA-HLKSEVLKNAARDFQEIVIRMISAVIlPLLPIYIFG-IFLNMTHSGqvFGI 196
Cdd:PRK13628  133 SLVDNPINALLNAnyiGILAWAIGLGLAlRHASDTTKNVVNDLSEAVSQIVKWVI-RFAPIGIFGlVASTLAETG--FSA 209

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 197 LMVFIKIIGVIFLLHIFL-LVFQYSIAALFVRKNPLKLLGRMM-PAYFTALGTQSSAATIPVTLEQSRKNGVSADIAGFV 274
Cdd:PRK13628  210 LAGYAQLLAVLVGCMLFVaLVVNPLIVFWKIRRNPYPLVFTCLrESGVTAFFTRSSAANIPVNMALCEKLGLDEDTYSVS 289

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1466930613 275 IPLCATIHLSGSTLKIVACALALMIMQGMPHDFPLFAGFIFMLGITMVAAPGVPGG 330
Cdd:PRK13628  290 IPLGATINMAGAAITITVLTLAAVHTLGIPVDLPTALLLSVVAAISACGASGVAGG 345
 
Name Accession Description Interval E-value
SDF pfam00375
Sodium:dicarboxylate symporter family;
22-381 2.42e-76

Sodium:dicarboxylate symporter family;


Pssm-ID: 425646 [Multi-domain]  Cd Length: 388  Bit Score: 241.27  E-value: 2.42e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613  22 FGNFLPASLVRLFVTFNAIFSEFLNFSIPLIIVGLVT-IAIADIGKGAGRMLVFTALIAYGATLFSGFLSYFTGVAVFP- 99
Cdd:pfam00375  15 IGLFFPELAAWLKPLGDLFIRLLKMIIVPLIFASIISgIASLGDGKKLGKLGGKTLLYFLVTTAIAALIGLLVANVFQPg 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 100 ---SLIETGVPLEEVSESQGILPYFSVGIPPLM-------NVMTALVLAFTLGLGLAHL--KSEVLKNAARDFQEIVIRM 167
Cdd:pfam00375  95 sglALIAASLKEAKAAEAPSLLDFILNIIPSNIfealaegNVLAVIVFAILFGIALAALgeKGEPLLNFIESLQEVMMKV 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 168 ISAVILpLLPIYIFGIFLNMTHSgQVFGILMVFIKIIGVIFLLHIFLLVFQYSIAALFV-RKNPLKLLGRMMPAYFTALG 246
Cdd:pfam00375 175 IGWVMK-LAPIGVFALIANTVGT-YGLGILSSLAKFLLVVYLGLAIHLLIVYPLLIKFLgKVNPFKFLKKMLPALLTAFS 252

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 247 TQSSAATIPVTLEQSRKN-GVSADIAGFVIPLCATIHLSGSTLKIVACALALMIMQGMPHDFPLFAGFIFMLGITMVAAP 325
Cdd:pfam00375 253 TASSAATLPVTLECAEKNlGVSESIASFVLPLGATINMDGTAIYLAVAAIFIAQAYGVDLSFGQQLTLVLTATLASIGAA 332

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1466930613 326 GVPGGAIMAsLGILQSMLGFDESAQALMIALYIAMDSFGTACNVTGDGAIALIIDK 381
Cdd:pfam00375 333 GVPGGGLVA-LGLVLSALGLPLEGIALILAIDRLLDMFRTAVNVTGDAAAAVIVAK 387
GltP COG1301
Na+/H+-dicarboxylate symporter [Energy production and conversion];
22-381 1.82e-36

Na+/H+-dicarboxylate symporter [Energy production and conversion];


Pssm-ID: 440912 [Multi-domain]  Cd Length: 406  Bit Score: 136.78  E-value: 1.82e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613  22 FGNFLPASLVRLFVTFNAIFSEFLNFSIPLIIVGLVTIAIADIG--KGAGRMLVFTALIAYGATLFSGFLSYFTGVAVFP 99
Cdd:COG1301    19 LGLLLPELVAAVLKPLGDIFINLLKMIVVPLVFFSIVVGIASLGdlKKLGRIGGKTLLYFLVTTTIALVIGLVVANLFQP 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 100 ----SLIETGVPLEEVSESQGILPYFSVGIPPlmNVMTAL---------VLAFTLGLGLAHL--KSEVLKNAARDFQEIV 164
Cdd:COG1301    99 gaglNLDLADAAAAEAAEAPSLLDFLLNIIPS--NIFEAFaegnmlqiiFFAILFGIALAALgeKGKPLLDFFESLSEVM 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 165 IRMISAVILpLLPIYIFGIFLNMTHSgQVFGILMVFIKIIGVIFL-LHIFLLVFQYSIAALFVRKNPLKLLGRMMPAYFT 243
Cdd:COG1301   177 FKIVGWVMK-LAPIGVFALIAATVAK-YGLDALGSLGKLVLTVYLaLLLHLFVVLPLILRLLTGLSPLKFLRAIRPALLL 254

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 244 ALGTQSSAATIPVTLEQSRKN-GVSADIAGFVIPLCATIHLSGSTLKIVACALALMIMQGMPHDFPLFAGFIFMLGITMV 322
Cdd:COG1301   255 AFSTSSSEATLPVTMEKAEEKlGVSKSVASFVLPLGATINMDGTAIYQAVAALFIAQAYGIDLSLGQQLTIVLTAVLASI 334

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1466930613 323 AAPGVPGGAIMASLGILQSMlGFDESAQALMIALYIAMDSFGTACNVTGDGAIALIIDK 381
Cdd:COG1301   335 GAAGVPGAGLVMLAAVLSAV-GLPLEGIALILGIDRILDMARTAVNVTGDAVATVVVAK 392
PRK13628 PRK13628
serine/threonine transporter SstT; Provisional
 50-330 1.99e-13

serine/threonine transporter SstT; Provisional


Pssm-ID: 184190 [Multi-domain]  Cd Length: 402  Bit Score: 71.05  E-value: 1.99e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613  50 PLIIVGLVTIAIADIGKGAGRMLVfTALIAYgatLFSGFLSYFTGVAV---FPSLIETGVPLEEVSESQGILP-----YF 121
Cdd:PRK13628   57 PILVFVLVMASIANHKKGQKTNIR-PILVLY---LLGTFLAALVAVVAsflFPSTLVLVASAADISPPQGIVEvlktlLL 132

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 122 SVGIPPLMNVMTA---LVLAFTLGLGLA-HLKSEVLKNAARDFQEIVIRMISAVIlPLLPIYIFG-IFLNMTHSGqvFGI 196
Cdd:PRK13628  133 SLVDNPINALLNAnyiGILAWAIGLGLAlRHASDTTKNVVNDLSEAVSQIVKWVI-RFAPIGIFGlVASTLAETG--FSA 209

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 197 LMVFIKIIGVIFLLHIFL-LVFQYSIAALFVRKNPLKLLGRMM-PAYFTALGTQSSAATIPVTLEQSRKNGVSADIAGFV 274
Cdd:PRK13628  210 LAGYAQLLAVLVGCMLFVaLVVNPLIVFWKIRRNPYPLVFTCLrESGVTAFFTRSSAANIPVNMALCEKLGLDEDTYSVS 289

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1466930613 275 IPLCATIHLSGSTLKIVACALALMIMQGMPHDFPLFAGFIFMLGITMVAAPGVPGG 330
Cdd:PRK13628  290 IPLGATINMAGAAITITVLTLAAVHTLGIPVDLPTALLLSVVAAISACGASGVAGG 345
SstT COG3633
Na+/serine and Na+/threonine symporter SstT [Amino acid transport and metabolism];
50-333 1.90e-10

Na+/serine and Na+/threonine symporter SstT [Amino acid transport and metabolism];


Pssm-ID: 442850  Cd Length: 406  Bit Score: 61.73  E-value: 1.90e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613  50 PLIIVGLVTIAIADIGKGAGRMLVfTALIAYgatLFSGFLSYFTGVAV---FPSLIETGVPLEEVSESQGILPYFSVgip 126
Cdd:COG3633    56 PILVFVLVMSAIANHKQGQKTNMK-PIIVLY---LLGTFLAALVAVVAsflFPTTLTLVAAAADLTPPGGIGEVLKT--- 128

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 127 PLMNV----MTAL-------VLAFTLGLGLA-HLKSEVLKNAARDFQEIVIRMISAVIlPLLPIYIFG-IFLNMTHSGqv 193
Cdd:COG3633   129 LLLNVvdnpVNALananyigILAWAIGLGLAlRHASDTTKTVLSDLSDAVSKIVRWVI-RFAPLGIFGlVASTVATTG-- 205

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 194 FGILMVFIKIIGVIFLLHIFL-LVFQYSIAALFVRKNPLKLLGRM-----MPAYFTalgtQSSAATIPVTLEQSRKNGVS 267
Cdd:COG3633   206 FSALLGYAHLLAVLVGCMLFVaLVVNPLIVFLKIRRNPYPLVFTClresgITAFFT----RSSAANIPVNMALCEKLGLD 281

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1466930613 268 ADIAGFVIPLCATIHLSGSTLKIVACALALMIMQGMPHDFPLFAGFIFMLGITMVAAPGVPGGAIM 333
Cdd:COG3633   282 EDTYSVSIPLGATINMAGAAITITVLTLAAVHTLGIEVDLPTALLLSVVAAVSACGASGVAGGSLL 347
TcyP COG1823
L-cystine transporter TcyP, sodium:dicarboxylate symporter family [Amino acid transport and ...
 151-385 6.55e-08

L-cystine transporter TcyP, sodium:dicarboxylate symporter family [Amino acid transport and metabolism];


Pssm-ID: 441428  Cd Length: 463  Bit Score: 54.06  E-value: 6.55e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 151 EVLKNAARDFQEIVIRMIsAVILPLLPIYIFGIFLNMTHSGQVFGI--LMVFIKI----IGVIFLLHIFLLvfqysiaaL 224
Cdd:COG1823   213 ETFLKGIDALQAIVMRLV-RLVLRLTPYGVLALMTKVVATSDFADIlnLGKFVVAsyvaLIIMFIVHLLLL--------A 283

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 225 FVRKNPLKLLGRMMPAYFTALGTQSSAATIPVTLE-QSRKNGVSADIAGFVIPLCATIHLSGstlkivaCA------LAL 297
Cdd:COG1823   284 LAGLNPLTYFKKVWPVLTFAFTSRSSAGTIPLNIEtQTKRLGVPEGIANFAASFGATIGQNG-------CAgiypamLAV 356

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 298 MIMQGM---PHDFPLFAGFIFMLGITMVAAPGVPGGAIMASLgILQSMLGFDESAQALMIALYIAMDSFGTACNVTGDGA 374
Cdd:COG1823   357 MIAPTVginPLDPSFILTLIAVVTISSFGVAGVGGGATFAAL-IVLSAMGLPVALAGLLISIEPLIDMGRTALNVSGSMT 435

                         250
                  ....*....|.
gi 1466930613 375 IALIIDKVMGK 385
Cdd:COG1823   436 AGTVTSRLLGQ 446
PRK14695 PRK14695
serine/threonine transporter SstT; Provisional
 172-372 6.22e-06

serine/threonine transporter SstT; Provisional


Pssm-ID: 173158  Cd Length: 319  Bit Score: 47.74  E-value: 6.22e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 172 ILPLLPIYIFGIFLNMTHSGQVFGILMVFIKIIGVIFLLHIFLLVFQYSIAALFVRKNPLKLLGRMMPAY-FTALGTQSS 250
Cdd:PRK14695  100 IINLAPFGILGLVFKTISDKGVGSLANYGILLVLLVTTMLFVAPVVNPLIAFFFMRRNPYPLVWNCLRVSgVTAFFTRSS 179

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1466930613 251 AATIPVTLEQSRKNGVSADIAGFVIPLCATIHLSGSTLKIVACALALMIMQGMPHDFPLFAGFIFMLGITMVAAPGVPGG 330
Cdd:PRK14695  180 ATNIPVNMKLCHDLGLNPDTYSVSIPLGSTINMAGVAITINLLTLVTVNTLGIPVDFATAFVLSVVAAISACGASGIAGG 259

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 1466930613 331 AIMAsLGILQSMLGF--DESAQALMIALYIAM--DSFGTACNVTGD 372
Cdd:PRK14695  260 SLLL-IPVACSLFGIsnDIAIQIVGVGFVIGViqDSCETALNSSTD 304
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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