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Conserved domains on  [gi|149695371|ref|XP_001489148|]
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steroid receptor-associated and regulated protein [Equus caballus]

Protein Classification

steroid receptor-associated and regulated protein( domain architecture ID 10634675)

steroid receptor-associated and regulated protein (SRARP) may regulate the transcriptional function of androgen and estrogen receptors

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
C1ORF64 pfam15547
Steroid receptor-associated and regulated protein; Steroid receptor-associated and regulated ...
 33-169 6.76e-69

Steroid receptor-associated and regulated protein; Steroid receptor-associated and regulated protein is also known as ER-related factor, ERRF, or C1orf64. It is thought to regulate the transcriptional function of androgen and oestrogen receptors. Proteins in this family are typically between 145 and 169 amino acids in length, and have a conserved IDC sequence motif.


:

Pssm-ID: 464758  Cd Length: 137  Bit Score: 205.05  E-value: 6.76e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149695371   33 RHQKAIPTAHLTFVFDCARGKQLCLAAPSAPPRAPRPNPGPVTPPMKTYILFCGGNQPQQTHEVPLGGGCLAQAEGTLPP 112
Cdd:pfam15547   1 RHQKAIPTAHLTFVIDCTRGKQLSLAAPPAPPQAPSPNRGPVTPPMKTYIVFCGENQPHLTQETPLGGGCLAQARDTLPP 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 149695371  113 SGGTVAPASSPGSPLGCQEAPEAKGSPLKTVPSRSSAWGTVIGSLKALSSCVCGQAD 169
Cdd:pfam15547  81 CRGAVAPASSPVSPLCPQEAPEAKGSPLKAGPTRSSTWGTVKGSLKALSSCVCGQAD 137
 
Name Accession Description Interval E-value
C1ORF64 pfam15547
Steroid receptor-associated and regulated protein; Steroid receptor-associated and regulated ...
 33-169 6.76e-69

Steroid receptor-associated and regulated protein; Steroid receptor-associated and regulated protein is also known as ER-related factor, ERRF, or C1orf64. It is thought to regulate the transcriptional function of androgen and oestrogen receptors. Proteins in this family are typically between 145 and 169 amino acids in length, and have a conserved IDC sequence motif.


Pssm-ID: 464758  Cd Length: 137  Bit Score: 205.05  E-value: 6.76e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149695371   33 RHQKAIPTAHLTFVFDCARGKQLCLAAPSAPPRAPRPNPGPVTPPMKTYILFCGGNQPQQTHEVPLGGGCLAQAEGTLPP 112
Cdd:pfam15547   1 RHQKAIPTAHLTFVIDCTRGKQLSLAAPPAPPQAPSPNRGPVTPPMKTYIVFCGENQPHLTQETPLGGGCLAQARDTLPP 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 149695371  113 SGGTVAPASSPGSPLGCQEAPEAKGSPLKTVPSRSSAWGTVIGSLKALSSCVCGQAD 169
Cdd:pfam15547  81 CRGAVAPASSPVSPLCPQEAPEAKGSPLKAGPTRSSTWGTVKGSLKALSSCVCGQAD 137
 
Name Accession Description Interval E-value
C1ORF64 pfam15547
Steroid receptor-associated and regulated protein; Steroid receptor-associated and regulated ...
 33-169 6.76e-69

Steroid receptor-associated and regulated protein; Steroid receptor-associated and regulated protein is also known as ER-related factor, ERRF, or C1orf64. It is thought to regulate the transcriptional function of androgen and oestrogen receptors. Proteins in this family are typically between 145 and 169 amino acids in length, and have a conserved IDC sequence motif.


Pssm-ID: 464758  Cd Length: 137  Bit Score: 205.05  E-value: 6.76e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 149695371   33 RHQKAIPTAHLTFVFDCARGKQLCLAAPSAPPRAPRPNPGPVTPPMKTYILFCGGNQPQQTHEVPLGGGCLAQAEGTLPP 112
Cdd:pfam15547   1 RHQKAIPTAHLTFVIDCTRGKQLSLAAPPAPPQAPSPNRGPVTPPMKTYIVFCGENQPHLTQETPLGGGCLAQARDTLPP 80

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 149695371  113 SGGTVAPASSPGSPLGCQEAPEAKGSPLKTVPSRSSAWGTVIGSLKALSSCVCGQAD 169
Cdd:pfam15547  81 CRGAVAPASSPVSPLCPQEAPEAKGSPLKAGPTRSSTWGTVKGSLKALSSCVCGQAD 137
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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