NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1610635752|ref|YP_009590257|]
View 

ATP synthase F0 subunit 8 (mitochondrion) [Piranga erythrocephala]

Protein Classification

ATP synthase F0 subunit 8( domain architecture ID 10009574)

ATP synthase F0 subunit 8 is a component of the mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) that produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
ATP8 MTH00123
ATP synthase F0 subunit 8; Provisional
 1-55 5.11e-13

ATP synthase F0 subunit 8; Provisional


:

Pssm-ID: 214426  Cd Length: 54  Bit Score: 56.43  E-value: 5.11e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 1610635752  1 MPQLNPNPWLFIMITSWLTFSLIIQPKLLSFVSMNPPSnKPPVTPSTTPWTWPWT 55
Cdd:MTH00123   1 MPQLNPAPWFLIMLLTWLTLILIIQPKILSFTPTNNPT-KTNTTTNTTPWTWPWT 54
 
Name Accession Description Interval E-value
ATP8 MTH00123
ATP synthase F0 subunit 8; Provisional
 1-55 5.11e-13

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 214426  Cd Length: 54  Bit Score: 56.43  E-value: 5.11e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 1610635752  1 MPQLNPNPWLFIMITSWLTFSLIIQPKLLSFVSMNPPSnKPPVTPSTTPWTWPWT 55
Cdd:MTH00123   1 MPQLNPAPWFLIMLLTWLTLILIIQPKILSFTPTNNPT-KTNTTTNTTPWTWPWT 54
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-54 4.06e-08

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 43.87  E-value: 4.06e-08
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 1610635752  1 MPQLNPNPWLFIMITSWLTFSLIIQPKLLSFVSMNPPSNKPPVTPSTTPWTWPW 54
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTNPPPKSLKTTKHPNPWEWKW 54
 
Name Accession Description Interval E-value
ATP8 MTH00123
ATP synthase F0 subunit 8; Provisional
 1-55 5.11e-13

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 214426  Cd Length: 54  Bit Score: 56.43  E-value: 5.11e-13
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 1610635752  1 MPQLNPNPWLFIMITSWLTFSLIIQPKLLSFVSMNPPSnKPPVTPSTTPWTWPWT 55
Cdd:MTH00123   1 MPQLNPAPWFLIMLLTWLTLILIIQPKILSFTPTNNPT-KTNTTTNTTPWTWPWT 54
ATP8 MTH00133
ATP synthase F0 subunit 8; Provisional
 1-54 1.45e-12

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177191  Cd Length: 55  Bit Score: 55.27  E-value: 1.45e-12
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 1610635752  1 MPQLNPNPWLFIMITSWLTFSLIIQPKLLSFVSMNPPSNKPPVTPSTTPWTWPW 54
Cdd:MTH00133   1 MPQLNPAPWFAILVFSWLVFLTIIPPKVLAHTFPNEPTPQSTEKPKTEPWNWPW 54
ATP-synt_8 pfam00895
ATP synthase protein 8;
1-54 4.06e-08

ATP synthase protein 8;


Pssm-ID: 459986  Cd Length: 54  Bit Score: 43.87  E-value: 4.06e-08
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 1610635752  1 MPQLNPNPWLFIMITSWLTFSLIIQPKLLSFVSMNPPSNKPPVTPSTTPWTWPW 54
Cdd:pfam00895  1 MPQLNTSTWFTTILLMWLTLFILFQLKLSSHTPTNPPPKSLKTTKHPNPWEWKW 54
ATP8 MTH00171
ATP synthase F0 subunit 8; Provisional
 1-54 7.99e-08

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 177225  Cd Length: 54  Bit Score: 43.12  E-value: 7.99e-08
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 1610635752  1 MPQLNPNPWLFIMITSWLTFSLIIQPKLLSFVSMNPPSNKPPVTPSTTPWTWPW 54
Cdd:MTH00171   1 MPQLNPIPWFFIFLFSWLIFLTLLPNKITKHIFTNKPSPNQTEKPKPNEWNWPW 54
ATP8 MTH00072
ATP synthase F0 subunit 8; Provisional
 1-55 2.94e-07

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 164642  Cd Length: 54  Bit Score: 41.88  E-value: 2.94e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 1610635752  1 MPQLNPNPWLFIMITSWLTFSLIIQPKLLSFVSMNPPSNKPPVTPStTPWTWPWT 55
Cdd:MTH00072   1 MPQLNPGPWFAIFLMSWLIFLLILPFKISNHKNLNEPTSQNKKNKP-ESWNWPWT 54
ATP8 MTH00102
ATP synthase F0 subunit 8; Validated
 1-55 4.59e-03

ATP synthase F0 subunit 8; Validated


Pssm-ID: 214420  Cd Length: 67  Bit Score: 31.35  E-value: 4.59e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 1610635752  1 MPQLNPNPWLFIMITSWLTFSLIIQPKLLSFVSMNPPSNKPPVTPS-TTPWTWPWT 55
Cdd:MTH00102   1 MPQLDTSTWFITILSMLLTLFIIFQLKISKHNYPLNPEPKSLKTKKqNTPWEKKWT 56
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH