|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 615.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 1 MIKSLR*ENPVISLVNSVFIDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQD---SFVL 77
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDvnyGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 78 RFWHANGTSMFFLCVYIHIGRGIYYGSYTRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDD 157
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 158 IVKWVWGGFSVSNATLNRFFSLHYLLPFILAGLAVVHIIALHTEGSNNPIGVRSDIDKVQFHYYYVLKDSYGVAVLAIIV 237
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 238 SVIVFLYPYFLGDAENFKQANPLVTPVHIQPEWYFLYAYAILRSIPNKLGGVVALFSSFLILFLLPILHSSSLRGLTFRP 317
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 318 LSKILFLFLVGDFIVLTWIGGLPVEDPYIFVGQMAAIFYFAYFLIFSPLVGYLENKQLKL 377
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLLKL 380
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
10-371 |
2.36e-121 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 356.41 E-value: 2.36e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 10 PVISLVNSvFIDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQD---SFVLRFWHANGTS 86
Cdd:COG1290 19 PLASLVRE-HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDvpgGWLIRYMHHWGAS 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 87 MFFLCVYIHIGRGIYYGSY--TRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDDIVKWVWG 164
Cdd:COG1290 98 LFFAAVYLHMFRGFFYGAYkkPRELNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 165 GFSVSNATLNRFFSLHYL-LPFILAGLAVVHIIALHTEGSNNPIGV----RSDIDKVQFHYYYVLKDSYGVAVLAIIVSV 239
Cdd:COG1290 178 GEFPGDATLNRFFALHVLlLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 240 IVFLYPyfLGDAENFKQANPLVTPVHIQPEWYFLYAYAILRSIP--NKLGGVVALFSSFLILFLLPILHSSSLRGLTFRP 317
Cdd:COG1290 258 LAFFFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 164420945 318 LSKILFLFLVGDFIVLTWIGGLPveDPYIFVGQMAAIFYFAYFLIFSPLVGYLE 371
Cdd:COG1290 336 VRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-204 |
4.07e-81 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 246.90 E-value: 4.07e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 10 PVISLVNSVFIDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQD---SFVLRFWHANGTS 86
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDvnfGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 87 MFFLCVYIHIGRGIYYGSY--TRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDDIVKWVWG 164
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 164420945 165 GFSVSNATLNRFFSLHYLLPFILAGLAVVHIIALHTEGSN 204
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-202 |
1.14e-70 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 219.56 E-value: 1.14e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 19 FIDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQD---SFVLRFWHANGTSMFFLCVYIH 95
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDvnfGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 96 IGRGIYYG--SYTRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDDIVKWVWGGFSVSNATL 173
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 164420945 174 NRFFSLHYLLPFILAGLAVVHIIALHTEG 202
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
257-337 |
6.62e-07 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 48.64 E-value: 6.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 257 ANPLVTPVHIQPEWYFLYAYAILRSIPNKLGGVVALFSSFLILFLLPILHSSSLRGLTF-RPLSKILFLFlvGDFIVLtW 335
Cdd:TIGR01156 66 ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATTVFLF--GTVVAL-W 142
|
..
gi 164420945 336 IG 337
Cdd:TIGR01156 143 LG 144
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 615.56 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 1 MIKSLR*ENPVISLVNSVFIDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQD---SFVL 77
Cdd:MTH00053 1 MTKTIRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDvnyGFIL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 78 RFWHANGTSMFFLCVYIHIGRGIYYGSYTRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDD 157
Cdd:MTH00053 81 RYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 158 IVKWVWGGFSVSNATLNRFFSLHYLLPFILAGLAVVHIIALHTEGSNNPIGVRSDIDKVQFHYYYVLKDSYGVAVLAIIV 237
Cdd:MTH00053 161 IVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 238 SVIVFLYPYFLGDAENFKQANPLVTPVHIQPEWYFLYAYAILRSIPNKLGGVVALFSSFLILFLLPILHSSSLRGLTFRP 317
Cdd:MTH00053 241 SIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRP 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 318 LSKILFLFLVGDFIVLTWIGGLPVEDPYIFVGQMAAIFYFAYFLIFSPLVGYLENKQLKL 377
Cdd:MTH00053 321 LSKILFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLLKL 380
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
5-376 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 562.79 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 5 LR*ENPVISLVNSVFIDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQD---SFVLRFWH 81
Cdd:MTH00022 3 LRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDvnyGFLLRYLH 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 82 ANGTSMFFLCVYIHIGRGIYYGSYTRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDDIVKW 161
Cdd:MTH00022 83 ANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQW 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 162 VWGGFSVSNATLNRFFSLHYLLPFILAGLAVVHIIALHTEGSNNPIGVRSDIDKVQFHYYYVLKDSYGVAVLAIIVSVIV 241
Cdd:MTH00022 163 VWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIV 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 242 FLYPYFLGDAENFKQANPLVTPVHIQPEWYFLYAYAILRSIPNKLGGVVALFSSFLILFLLPILHSSSLRGLTFRPLSKI 321
Cdd:MTH00022 243 YFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRM 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 164420945 322 LFLFLVGDFIVLTWIGGLPVEDPYIFVGQMAAIFYFAYFLIFSPLVGYLENKQLK 376
Cdd:MTH00022 323 AFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLLF 377
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 562.22 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 1 MIKSLR*ENPVISLVNSVFIDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQD---SFVL 77
Cdd:MTH00119 1 MAPNLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDvqyGWLI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 78 RFWHANGTSMFFLCVYIHIGRGIYYGSYTRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDD 157
Cdd:MTH00119 81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 158 IVKWVWGGFSVSNATLNRFFSLHYLLPFILAGLAVVHIIALHTEGSNNPIGVRSDIDKVQFHYYYVLKDSYGVAVLAIIV 237
Cdd:MTH00119 161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 238 SVIVFLYPYFLGDAENFKQANPLVTPVHIQPEWYFLYAYAILRSIPNKLGGVVALFSSFLILFLLPILHSSSLRGLTFRP 317
Cdd:MTH00119 241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 318 LSKILFLFLVGDFIVLTWIGGLPVEDPYIFVGQMAAIFYFAYFLIFSPLVGYLENKQLKL 377
Cdd:MTH00119 321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
12-363 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 543.61 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 12 ISLVNSVFIDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQD---SFVLRFWHANGTSMF 88
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDvnyGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 89 FLCVYIHIGRGIYYGSYTRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDDIVKWVWGGFSV 168
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 169 SNATLNRFFSLHYLLPFILAGLAVVHIIALHTEGSNNPIGVRSDIDKVQFHYYYVLKDSYGVAVLAIIVSVIVFLYPYFL 248
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 249 GDAENFKQANPLVTPVHIQPEWYFLYAYAILRSIPNKLGGVVALFSSFLILFLLPILHSSSLRGLTFRPLSKILFLFLVG 328
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*
gi 164420945 329 DFIVLTWIGGLPVEDPYIFVGQMAAIFYFAYFLIF 363
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIIN 355
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
5-366 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 534.49 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 5 LR*ENPVISLVNSVFIDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQDS---FVLRFWH 81
Cdd:MTH00191 1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVnygWLLRNIH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 82 ANGTSMFFLCVYIHIGRGIYYGSYTRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDDIVKW 161
Cdd:MTH00191 81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 162 VWGGFSVSNATLNRFFSLHYLLPFILAGLAVVHIIALHTEGSNNPIGVRSDIDKVQFHYYYVLKDSYGVAVLAIIVSVIV 241
Cdd:MTH00191 161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 242 FLYPYFLGDAENFKQANPLVTPVHIQPEWYFLYAYAILRSIPNKLGGVVALFSSFLILFLLPILHSSSLRGLTFRPLSKI 321
Cdd:MTH00191 241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 164420945 322 LFLFLVGDFIVLTWIGGLPVEDPYIFVGQMAAIFYFAYFLIFSPL 366
Cdd:MTH00191 321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
4-376 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 531.15 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 4 SLR*ENPVISLVNSVFIDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQD---SFVLRFW 80
Cdd:MTH00131 3 SLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDvnyGWLIRNL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 81 HANGTSMFFLCVYIHIGRGIYYGSYTRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDDIVK 160
Cdd:MTH00131 83 HANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQ 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 161 WVWGGFSVSNATLNRFFSLHYLLPFILAGLAVVHIIALHTEGSNNPIGVRSDIDKVQFHYYYVLKDSYGVAVLAIIVSVI 240
Cdd:MTH00131 163 WIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 241 VFLYPYFLGDAENFKQANPLVTPVHIQPEWYFLYAYAILRSIPNKLGGVVALFSSFLILFLLPILHSSSLRGLTFRPLSK 320
Cdd:MTH00131 243 ALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQ 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 164420945 321 ILFLFLVGDFIVLTWIGGLPVEDPYIFVGQMAAIFYFAYFLIFSPLVGYLENKQLK 376
Cdd:MTH00131 323 FLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALE 378
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-377 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 530.02 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 1 MIKSLR*ENPVISLVNSVFIDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQD---SFVL 77
Cdd:MTH00074 1 MAHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDvnyGWLM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 78 RFWHANGTSMFFLCVYIHIGRGIYYGSYTRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDD 157
Cdd:MTH00074 81 RNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 158 IVKWVWGGFSVSNATLNRFFSLHYLLPFILAGLAVVHIIALHTEGSNNPIGVRSDIDKVQFHYYYVLKDSYGVAVLAIIV 237
Cdd:MTH00074 161 LVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTAL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 238 SVIVFLYPYFLGDAENFKQANPLVTPVHIQPEWYFLYAYAILRSIPNKLGGVVALFSSFLILFLLPILHSSSLRGLTFRP 317
Cdd:MTH00074 241 ALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRP 320
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 318 LSKILFLFLVGDFIVLTWIGGLPVEDPYIFVGQMAAIFYFAYFLIFSPLVGYLENKQLKL 377
Cdd:MTH00074 321 LTQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLKW 380
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
4-376 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 528.05 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 4 SLR*ENPVISLVNSVFIDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQD---SFVLRFW 80
Cdd:MTH00100 3 NIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDvnyGWIIRYL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 81 HANGTSMFFLCVYIHIGRGIYYGSYTRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDDIVK 160
Cdd:MTH00100 83 HANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVE 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 161 WVWGGFSVSNATLNRFFSLHYLLPFILAGLAVVHIIALHTEGSNNPIGVRSDIDKVQFHYYYVLKDSYGVAVLAIIVSVI 240
Cdd:MTH00100 163 WIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLL 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 241 VFLYPYFLGDAENFKQANPLVTPVHIQPEWYFLYAYAILRSIPNKLGGVVALFSSFLILFLLPILHSSSLRGLTFRPLSK 320
Cdd:MTH00100 243 VLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQ 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 164420945 321 ILFLFLVGDFIVLTWIGGLPVEDPYIFVGQMAAIFYFAYFLIFSPLVGYLENKQLK 376
Cdd:MTH00100 323 CLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLK 378
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-375 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 519.46 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 1 MIKSLR*ENPVISLVNSVFIDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQDS---FVL 77
Cdd:MTH00145 1 MLSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVnygWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 78 RFWHANGTSMFFLCVYIHIGRGIYYGSYTRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDD 157
Cdd:MTH00145 81 RSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 158 IVKWVWGGFSVSNATLNRFFSLHYLLPFILAGLAVVHIIALHTEGSNNPIGVRSDIDKVQFHYYYVLKDSYGVAVLAIIV 237
Cdd:MTH00145 161 LVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 238 SVIVFLYPYFLGDAENFKQANPLVTPVHIQPEWYFLYAYAILRSIPNKLGGVVALFSSFLILFLLPILHSSSLRGLTFRP 317
Cdd:MTH00145 241 VFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 164420945 318 LSKILFLFLVGDFIVLTWIGGLPVEDPYIFVGQMAAIFYFAYFLIfSPLVGYLENKQL 375
Cdd:MTH00145 321 LNQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYFLFFLI-LPLVQKLWDNIL 377
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
5-373 |
0e+00 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 511.94 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 5 LR*ENPVISLVNSVFIDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQD---SFVLRFWH 81
Cdd:MTH00034 4 LRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDvnyGWLLRNIH 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 82 ANGTSMFFLCVYIHIGRGIYYGSYTRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDDIVKW 161
Cdd:MTH00034 84 ANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQW 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 162 VWGGFSVSNATLNRFFSLHYLLPFILAGLAVVHIIALHTEGSNNPIGVRSDIDKVQFHYYYVLKDSYGVAVLAIIVSVIV 241
Cdd:MTH00034 164 IWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLA 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 242 FLYPYFLGDAENFKQANPLVTPVHIQPEWYFLYAYAILRSIPNKLGGVVALFSSFLILFLLPILHSSSLRGLTFRPLSKI 321
Cdd:MTH00034 244 LLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQI 323
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 164420945 322 LFLFLVGDFIVLTWIGGLPVEDPYIFVGQMAAIFYFAYFLIFSPLVGYLENK 373
Cdd:MTH00034 324 AFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENK 375
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-376 |
1.62e-179 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 503.44 E-value: 1.62e-179
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 1 MIKSLR*ENPVISLVNSVFIDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQD---SFVL 77
Cdd:MTH00016 1 MFSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDvnyGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 78 RFWHANGTSMFFLCVYIHIGRGIYYGSYTRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDD 157
Cdd:MTH00016 81 RNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKM 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 158 IVKWVWGGFSVSNATLNRFFSLHYLLPFILAGLAVVHIIALHTEGSNNPIGVRSDIDKVQFHYYYVLKDSYGVAVLAIIV 237
Cdd:MTH00016 161 LVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 238 SVIVFLYPYFLGDAENFKQANPLVTPVHIQPEWYFLYAYAILRSIPNKLGGVVALFSSFLILFLLPILHSSSLRGLTFRP 317
Cdd:MTH00016 241 LSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 164420945 318 LSKILFLFLVGDFIVLTWIGGLPVEDPYIFVGQMAAIFYFAYFLIFsPLVGYLENKQLK 376
Cdd:MTH00016 321 LNQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMIN-PLLMKLWDKLLK 378
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-376 |
1.88e-157 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 447.83 E-value: 1.88e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 1 MIKSLR*ENPVISLVNSVFIDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQD---SFVL 77
Cdd:MTH00224 1 MFKPFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDvnyGWLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 78 RFWHANGTSMFFLCVYIHIGRGIYYGSYTRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDD 157
Cdd:MTH00224 81 RSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKD 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 158 IVKWVWGGFSVSNATLNRFFSLHYLLPFILAGLAVVHIIALHTEGSNNPIGVRSDIDKVQFHYYYVLKDSYGVAVLAIIV 237
Cdd:MTH00224 161 LVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 238 SVIVFLYPYFLGDAENFKQANPLVTPVHIQPEWYFLYAYAILRSIPNKLGGVVALFSSFLILFLLPILHSSSLRGLTFRP 317
Cdd:MTH00224 241 SLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYP 320
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 164420945 318 LSKILFLFLVGDFIVLTWIGGLPVEDPYIFVGQMAAIFYFAYFlIFSPLVGYLENKQLK 376
Cdd:MTH00224 321 LNQLLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYFSYF-IISPAISKLWDDLLN 378
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
20-372 |
1.70e-138 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 399.70 E-value: 1.70e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 20 IDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQD---SFVLRFWHANGTSMFFLCVYIHI 96
Cdd:MTH00033 16 IDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDvnyGWILRYVHANGASLFFICVYCHI 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 97 GRGIYYGSYTRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDDIVKWVWGGFSVSNATLNRF 176
Cdd:MTH00033 96 GRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRF 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 177 FSLHYLLPFILAGLAVVHIIALHTEGSNNPIGVRSDIDKVQFHYYYVLKDSYGVAVLAIIVsVIVFLYPY---FLGDAEN 253
Cdd:MTH00033 176 FSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVF-VIIGIEPRietLLQDPEN 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 254 FKQANPLVTPVHIQPEWYFLYAYAILRSIPNKLGGVVALFSSFLILFLLPILHSSSLRGLTFRPLSKILFLFLVGDFIVL 333
Cdd:MTH00033 255 FIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDFIIL 334
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 164420945 334 TWIGGLPV-EDPYIFVGQMAAIFYFAYFLIFSPLVGYLEN 372
Cdd:MTH00033 335 TWIGSAPAgADPYVLIGRIATIFYFGYFLVLVPLLGYLSN 374
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
10-371 |
2.36e-121 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 356.41 E-value: 2.36e-121
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 10 PVISLVNSvFIDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQD---SFVLRFWHANGTS 86
Cdd:COG1290 19 PLASLVRE-HLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDvpgGWLIRYMHHWGAS 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 87 MFFLCVYIHIGRGIYYGSY--TRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDDIVKWVWG 164
Cdd:COG1290 98 LFFAAVYLHMFRGFFYGAYkkPRELNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFG 177
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 165 GFSVSNATLNRFFSLHYL-LPFILAGLAVVHIIALHTEGSNNPIGV----RSDIDKVQFHYYYVLKDSYGVAVLAIIVSV 239
Cdd:COG1290 178 GEFPGDATLNRFFALHVLlLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGVFAL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 240 IVFLYPyfLGDAENFKQANPLVTPVHIQPEWYFLYAYAILRSIP--NKLGGVVALFSSFLILFLLPILHSSSLRGLTFRP 317
Cdd:COG1290 258 LAFFFP--INPPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYRP 335
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 164420945 318 LSKILFLFLVGDFIVLTWIGGLPveDPYIFVGQMAAIFYFAYFLIFSPLVGYLE 371
Cdd:COG1290 336 VRTALGVAFIVFFIVLTILGANP--PIATLLGSINTVTYFAFFLIVLPILAFIE 387
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
15-363 |
7.11e-116 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 341.15 E-value: 7.11e-116
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 15 VNSVFIDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQDSF---VLRFWHANGTSMFFLC 91
Cdd:MTH00086 3 VNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNfgwLFRIFHFNGASLFFIF 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 92 VYIHIGRGIYYGSYTRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDDIVKWVWGGFSVSNA 171
Cdd:MTH00086 83 LYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSA 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 172 TLNRFFSLHYLLPFILAGLAVVHIIALHTEGSNNPIGVRSDIDKVQFHYYYVLKDSYGVAVLAIIVsVIVFLYPYFLGDA 251
Cdd:MTH00086 163 TLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWLVFI-IFSLFYPFNLGDP 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 252 ENFKQANPLVTPVHIQPEWYFLYAYAILRSIPNKLGGVVALFSSFLILFLLPILHSSslrGLTFRPLSKILFLFLVGDFI 331
Cdd:MTH00086 242 EMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIFVNNY---TSCLNKLNKFLVFSFIVVNV 318
|
330 340 350
....*....|....*....|....*....|..
gi 164420945 332 VLTWIGGLPVEDPYIFVGQMAAIFYFAYFLIF 363
Cdd:MTH00086 319 ILSWLGQCLVEYPFLFLSQIFSFIYFFLILLM 350
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
12-363 |
4.93e-91 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 277.63 E-value: 4.93e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 12 ISLVNSVFIDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQDSF---VLRFWHANGTSMF 88
Cdd:MTH00046 2 ISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFftwCVRYWHIWGVNVL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 89 FLCVYIHIGRGIYYGSYTRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDDIVKWVWGGFSV 168
Cdd:MTH00046 82 FILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 169 SNATLNRFFSLHYLLPFILAGLAVVHIIALHTEGSNNPIGVRSDI-DKVQFHYYYVLKDSYGVAVLAIIVSVIVFLYPYF 247
Cdd:MTH00046 162 TGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 248 LGDAENFKQANPLVTPVHIQPEWYFLYAYAILRSIPNKLGGVVALFSSFLILFLLPILHSSslrglTFRPLSKILFLFLV 327
Cdd:MTH00046 242 VLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLVLVLSFLFFLWVPTFNGSS-----VYSVWRQVNFWLIV 316
|
330 340 350
....*....|....*....|....*....|....*.
gi 164420945 328 GDFIVLTWIGGLPVEDPYIFVGQMAAIFYFAYFLIF 363
Cdd:MTH00046 317 SLFFSLSYLGGCHPEYPYLLISQLFSVLMVLLLFIF 352
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
10-204 |
4.07e-81 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 246.90 E-value: 4.07e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 10 PVISLVNSVFIDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQD---SFVLRFWHANGTS 86
Cdd:cd00284 1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDvnfGWLIRSLHANGAS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 87 MFFLCVYIHIGRGIYYGSY--TRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDDIVKWVWG 164
Cdd:cd00284 81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 164420945 165 GFSVSNATLNRFFSLHYLLPFILAGLAVVHIIALHTEGSN 204
Cdd:cd00284 161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
19-202 |
1.14e-70 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 219.56 E-value: 1.14e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 19 FIDLPAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQD---SFVLRFWHANGTSMFFLCVYIH 95
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDvnfGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 96 IGRGIYYG--SYTRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDDIVKWVWGGFSVSNATL 173
Cdd:pfam00033 81 IFRGLYYGgfSYPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 164420945 174 NRFFSLHYLLPFILAGLAVVHIIALHTEG 202
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
205-352 |
1.32e-40 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 140.47 E-value: 1.32e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 205 NPIGVRSDIDKVQFHYYYVLKDSYGVAVLAIIVSVIVFLYPYFLGDAENFKQANPLVTPVHIQPEWYFLYAYAILRSIPN 284
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 164420945 285 KLGGVVALFSSFLILFLLPILHSSSLRGlTFRPLSKILFLFLVGDFIVLTWIGGLPVEDPYIFVGQMA 352
Cdd:cd00290 81 KLLGVLAMAASILSLFLVPFLENSNKRS-QFRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
86-251 |
4.21e-37 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 131.98 E-value: 4.21e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 86 SMFFLCVYIHIGRGIYYGSY--TRTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDDIVKWVW 163
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYrkPRELNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 164 GGFSVSNATLNRFFSLH-YLLPFILAGLAVVHIIALHTEGSNNPIGVRSDIDKVQFHYYYVLKDSYGVAVLAIIVSVIVF 242
Cdd:pfam13631 81 GGPFPGTATIPRFYALHiLLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 164420945 243 LYPYFLGDA 251
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
256-356 |
6.94e-37 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 129.14 E-value: 6.94e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 256 QANPLVTPVHIQPEWYFLYAYAILRSIPNKLGGVVALFSSFLILFLLPILHSSSLRGLTFRPLSKILFLFLVGDFIVLTW 335
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 164420945 336 IGGLPVEDPYIFVGQMAAIFY 356
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
23-207 |
4.66e-34 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 125.59 E-value: 4.66e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 23 PAPSNISYLWNFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQD---SFVLRFWHANGTSMFFLCVYIHIGRG 99
Cdd:PRK03735 33 PAHHFSAFVYCFGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEvafGWIVRGMHHWGASLVIVMMFLHTLRV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 100 IYYGSYT--RTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDDIVKWVWGGFSVSNATLNRFF 177
Cdd:PRK03735 113 FFTGGYKkpRELNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFF 192
|
170 180 190
....*....|....*....|....*....|.
gi 164420945 178 SLH-YLLPFILAGLAVVHIIALHTEGSNNPI 207
Cdd:PRK03735 193 AIHvFFLPWALAVLMLAHFLMIRKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
22-207 |
1.69e-24 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 99.80 E-value: 1.69e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 22 LPAPSNISYLwnFGSLLGICLVIQIVTGIFLAMHYCADASLAFSSVAYLTQD---SFVLRFWHANGTSMFFLCVYIHIGR 98
Cdd:CHL00070 26 VPPHVNIFYC--LGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEvnfGWLIRSVHRWSASMMVLMMILHVFR 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 99 GIYYGSYT--RTIVWNVGILLYVLMMATAFIGYVLPWGQMSFWAATVITNLLSAIPYIGDDIVKWVWGGFSVSNATLNRF 176
Cdd:CHL00070 104 VYLTGGFKkpRELTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRF 183
|
170 180 190
....*....|....*....|....*....|..
gi 164420945 177 FSLH-YLLPFILAGLAVVHIIALHTEGSNNPI 207
Cdd:CHL00070 184 YSLHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
229-343 |
3.29e-08 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 52.49 E-value: 3.29e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 229 GVAVLAIIVSVIVfLYPYFLGDAenfkqANPLVTPVHIQPEWYFLYAYAILRSIPNKLGGVVALFSSFLILFLLPILHSS 308
Cdd:COG5679 45 ILGTIALCIGLAV-LDPAMMGEP-----ADPFATPLEILPEWYLYPVFQILRVVPNKLLGIVMMAAIPLGLMLVPFIENV 118
|
90 100 110
....*....|....*....|....*....|....*....
gi 164420945 309 SLRGLTF-RPLSKILFLFlvgDFIVLTWIG---GLPVED 343
Cdd:COG5679 119 NKFQNPFrRPVATAVFLF---GTLVTLWLGigaALPIDK 154
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
232-292 |
3.41e-08 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 52.31 E-value: 3.41e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 164420945 232 VLAIIVSVIVfLYPYFLGDAenfkqANPLVTPVHIQPEWYFLYAYAILRSIPNKLGGVVAL 292
Cdd:CHL00058 47 TIACNVGLAV-LEPSMIGEP-----ADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLM 101
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
257-337 |
6.62e-07 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 48.64 E-value: 6.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 164420945 257 ANPLVTPVHIQPEWYFLYAYAILRSIPNKLGGVVALFSSFLILFLLPILHSSSLRGLTF-RPLSKILFLFlvGDFIVLtW 335
Cdd:TIGR01156 66 ANPFATPLEILPEWYFYPVFQILRTVPNKLLGVLLMAAVPAGLLTVPFIENVNKFQNPFrRPVATTVFLF--GTVVAL-W 142
|
..
gi 164420945 336 IG 337
Cdd:TIGR01156 143 LG 144
|
|
| |
