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Conserved domains on  [gi|1693291038|ref|YP_009652369|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Nothrotheriops shastensis]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009566)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177166  Cd Length: 318  Bit Score: 568.10  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038   1 MFFANILCLIIPILLAVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFT 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  81 LALSLWIPLPMPHPLINLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 161 TLSTLTTTQEQMWLVLPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTI 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1693291038 241 LFFGAFHNPLLPELYTINFVTKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHMAAPISFASIPPQT 318
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 568.10  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038   1 MFFANILCLIIPILLAVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFT 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  81 LALSLWIPLPMPHPLINLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 161 TLSTLTTTQEQMWLVLPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTI 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1693291038 241 LFFGAFHNPLLPELYTINFVTKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHMAAPISFASIPPQT 318
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
NADHdh pfam00146
NADH dehydrogenase;
16-303 3.10e-118

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 342.53  E-value: 3.10e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  16 AVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFTLALSLWIPLPMPHPL 95
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  96 I--NLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSFTLSTLTTTQEQMW 173
Cdd:pfam00146  92 VlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGW 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 174 LVLPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTILFFGAFHNPLLPe 253
Cdd:pfam00146 172 FIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGPFPL- 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1693291038 254 LYTINFVTKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMW 303
Cdd:pfam00146 251 PGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-303 2.00e-108

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 318.61  E-value: 2.00e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  16 AVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFTLALSLWIPLPM--PH 93
Cdd:COG1005    25 LAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFgpGL 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  94 PLINLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSFTLSTLTTTQEQ-M 172
Cdd:COG1005   105 VLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAGgL 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 173 WLVLPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTILFFGAFHNPLLP 252
Cdd:COG1005   185 WFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFPI 264

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1693291038 253 ELYT-----INFVTKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMW 303
Cdd:COG1005   265 LPLGglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 568.10  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038   1 MFFANILCLIIPILLAVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFT 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  81 LALSLWIPLPMPHPLINLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSF 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 161 TLSTLTTTQEQMWLVLPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTI 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1693291038 241 LFFGAFHNPLLPELYTINFVTKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHMAAPISFASIPPQT 318
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 16-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 538.33  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  16 AVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFTLALSLWIPLPMPHPL 95
Cdd:MTH00111   21 AVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMPFPL 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  96 INLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSFTLSTLTTTQEQMWLV 175
Cdd:MTH00111  101 ADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEPLWLI 180

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 176 LPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTILFFGAFHNPLLPELY 255
Cdd:MTH00111  181 FSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNPSTLNLPPELF 260

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1693291038 256 TINFVTKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHMAAPISFASIPPQT 318
Cdd:MTH00111  261 TINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQL 323
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 16-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 512.23  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  16 AVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFTLALSLWIPLPMPHPL 95
Cdd:MTH00134   22 AVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMPYPV 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  96 INLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSFTLSTLTTTQEQMWLV 175
Cdd:MTH00134  102 TDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQESIWLL 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 176 LPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTILFFGAFHNPLLPELY 255
Cdd:MTH00134  182 LPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIPTLPELT 261

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1693291038 256 TINFVTKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHMAAPISFASIPPQT 318
Cdd:MTH00134  262 TINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPPQL 324
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 16-317 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 505.70  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  16 AVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFTLALSLWIPLPMPHPL 95
Cdd:MTH00071   21 AVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMPNNL 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  96 INLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSFTLSTLTTTQEQMWLV 175
Cdd:MTH00071  101 SNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEFMWLI 180

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 176 LPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTILFFGAFHNPLLPELY 255
Cdd:MTH00071  181 IPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYNHLQPELS 260

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1693291038 256 TINFVTKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHMAAPISFASIPPQ 317
Cdd:MTH00071  261 TMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPPM 322
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 16-316 1.29e-147

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 417.39  E-value: 1.29e-147
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  16 AVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFTLALSLWIPLPMPHPL 95
Cdd:MTH00218   18 AVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPLPFSL 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  96 INLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSFTLSTLTTTQEQMWLV 175
Cdd:MTH00218   98 INLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQETIWLL 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 176 LPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTILFFGAFHNpllpely 255
Cdd:MTH00218  178 IPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLT------- 250

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1693291038 256 TINFVTKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHMAAPISFASIPP 316
Cdd:MTH00218  251 TINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 1-316 6.21e-140

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 398.19  E-value: 6.21e-140
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038   1 MFFANILCLIIPILLAVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFT 80
Cdd:MTH00040    5 LFLINLLSFIVPVLLAVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  81 LALSLWIPLPMPHPLINLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSF 160
Cdd:MTH00040   85 LALLLWSLIPVPTPTLNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSF 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 161 TLSTLTTTQEQMWLVLPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTI 240
Cdd:MTH00040  165 SLSSISNSQNGSWLLFPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVI 244

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1693291038 241 LFFG--AFHNPLLPeLYTINFVTKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHMAAPISFASIPP 316
Cdd:MTH00040  245 LFLGggSPFNEIFP-INIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 16-302 3.12e-119

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 345.32  E-value: 3.12e-119
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  16 AVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFTLALSLWIPLPMPHPL 95
Cdd:MTH00143   17 AVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSYFSS 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  96 INLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSFTLSTLTTTQEQMWLV 175
Cdd:MTH00143   97 SYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSVWLG 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 176 LPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTILFFGafHNPLLPELY 255
Cdd:MTH00143  177 FLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFG--GSSVLFLLG 254

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1693291038 256 TINFVTKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCM 302
Cdd:MTH00143  255 GVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILV 301
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 16-313 2.48e-118

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 342.88  E-value: 2.48e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  16 AVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFTLALSLWIPLPMPHPL 95
Cdd:MTH00195   18 AVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSPFGF 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  96 INLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSFTLSTLTTTQEQMWLV 175
Cdd:MTH00195   98 SSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFSWVI 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 176 LPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTILFFGAFHNPLlpely 255
Cdd:MTH00195  178 LLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGGGGTII----- 252

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1693291038 256 tinFVTKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHMAAPISFAS 313
Cdd:MTH00195  253 ---VALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFALNS 307
NADHdh pfam00146
NADH dehydrogenase;
16-303 3.10e-118

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 342.53  E-value: 3.10e-118
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  16 AVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFTLALSLWIPLPMPHPL 95
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  96 I--NLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSFTLSTLTTTQEQMW 173
Cdd:pfam00146  92 VlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGW 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 174 LVLPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTILFFGAFHNPLLPe 253
Cdd:pfam00146 172 FIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGPFPL- 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1693291038 254 LYTINFVTKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMW 303
Cdd:pfam00146 251 PGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 1-305 6.47e-115

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 334.04  E-value: 6.47e-115
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038   1 MFFANILCLIIPILLAVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFT 80
Cdd:MTH00193    3 MMLINFLLLIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  81 LALSLWIPLPMPHPLINLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSF 160
Cdd:MTH00193   83 LSLLIWLIYPYLFNLISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSF 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 161 TLSTLTTTQEQMWLVLPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTI 240
Cdd:MTH00193  163 NLLDFMNYQKYIWFIFFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVL 242

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1693291038 241 LFFGAfhnpllpELYTINFVTKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHM 305
Cdd:MTH00193  243 MFLGG-------DLLSLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLLFFF 300
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 1-306 6.67e-109

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 318.90  E-value: 6.67e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038   1 MFFANILCLIIPILLAVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFT 80
Cdd:MTH00225    2 SFLLKFLIMLICLLLSVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  81 LALSLWIPLPMPHPLINLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSF 160
Cdd:MTH00225   82 LSLILWSLYPSMFSIYSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTY 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 161 TLSTLTTTQEQMWLVLPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTI 240
Cdd:MTH00225  162 NLFDFSYNQKYFWFMFVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSI 241

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1693291038 241 LFFGAfhnplLPELYTINFVTKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHMA 306
Cdd:MTH00225  242 LFFGG-----FFVTIDLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLAYLFMVLI 302
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-303 2.00e-108

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 318.61  E-value: 2.00e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  16 AVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFTLALSLWIPLPM--PH 93
Cdd:COG1005    25 LAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFgpGL 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  94 PLINLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSFTLSTLTTTQEQ-M 172
Cdd:COG1005   105 VLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAGgL 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 173 WLVLPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTILFFGAFHNPLLP 252
Cdd:COG1005   185 WFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFPI 264

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1693291038 253 ELYT-----INFVTKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMW 303
Cdd:COG1005   265 LPLGglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 16-316 3.70e-108

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 317.82  E-value: 3.70e-108
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  16 AVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFTLALSLW--IPLPMPH 93
Cdd:MTH00054   18 SIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWgvIPYGEGV 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  94 PLINLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSFTLSTLTTTQEQMW 173
Cdd:MTH00054   98 VLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQKNIW 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 174 LVLPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTILFFGAFHNPLLPE 253
Cdd:MTH00054  178 FIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLVISGPT 257

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1693291038 254 LYTINFV---TKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHMAAPISFASIPP 316
Cdd:MTH00054  258 SYFSNFVwfgIKIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPP 323
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 16-316 7.30e-107

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 314.75  E-value: 7.30e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  16 AVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFTLALSLWIPLPMPHPL 95
Cdd:MTH00216   22 AVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWGVIPYERGV 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  96 I--NLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSFTLSTLTTTQEQ-M 172
Cdd:MTH00216  102 LisDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITEIVLAQNNgI 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 173 WLVLPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTILFFGAFHNPllP 252
Cdd:MTH00216  182 WFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFLGGWLSP--I 259

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1693291038 253 ELYTIN---FVTKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHMAAPISFASIPP 316
Cdd:MTH00216  260 KYFKGGagwFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFNGPPP 326
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
17-303 4.26e-103

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 304.81  E-value: 4.26e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  17 VAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFTLALSLWIPLPM-PH-P 94
Cdd:PRK06076   27 VAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFgPElV 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  95 LINLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSFTLSTLTTTQEQMWL 174
Cdd:PRK06076  107 IADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQFLSWN 186

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 175 VLPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTILFFGAFHNPLLPEL 254
Cdd:PRK06076  187 IIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGGWLPPFPLGG 266

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1693291038 255 YT---INFVTKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMW 303
Cdd:PRK06076  267 GIpgaIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 16-316 2.91e-93

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 280.75  E-value: 2.91e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  16 AVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFTLALSLWIPLPMPHP- 94
Cdd:MTH00029   23 SVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIVTMDQGv 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  95 -LINLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSFTLSTLTTTQEQMW 173
Cdd:MTH00029  103 fLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQRSVW 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 174 LVLPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTILFFGAFHNPL--- 250
Cdd:MTH00029  183 LIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGGWLSPLdgi 262

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1693291038 251 -------------LPELYTINFVTKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHMAAPISFASIPP 316
Cdd:MTH00029  263 ptppeafsifeqiASSKSSFWFFTKSSIFILFFIWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGILIGFNGVPP 341
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 2-302 8.79e-91

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 273.19  E-value: 8.79e-91
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038   2 FFANILCLIIPILLAVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFTL 81
Cdd:MTH00010    5 FFISILLSYVMALLAMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLIL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  82 ALSLWIPLPMPHPLINLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSFT 161
Cdd:MTH00010   85 ALLLWSLYPHKHPSFFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLSALLILQTFS 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 162 LSTLTTTQeQMWLVLPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTIL 241
Cdd:MTH00010  165 FSKIIMSQ-YSWILLMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVF 243

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1693291038 242 FFGAFHNPLLPELYTInfvTKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCM 302
Cdd:MTH00010  244 FTSFIPSIFISDLMLI---LKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLM 301
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 16-302 1.89e-65

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 207.44  E-value: 1.89e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  16 AVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFTLALSLWIPLPMPHPL 95
Cdd:MTH00090   12 AIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYFFDF 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  96 INLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSFTLSTLTTtqeqMWLV 175
Cdd:MTH00090   92 LSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNNSFSFVSSFS----LSLF 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 176 LptwpLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTILFFGafhnpllpely 255
Cdd:MTH00090  168 V----IYLPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFK----------- 232

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1693291038 256 tINFVTKTLILtSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCM 302
Cdd:MTH00090  233 -FSFLMLFLIF-SLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLG 277
ndhA CHL00032
NADH dehydrogenase subunit 1
 24-298 4.61e-50

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 170.13  E-value: 4.61e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  24 ERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFTLALSLWIPLPMPHPLI--NLNLG 101
Cdd:CHL00032   51 EREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPFGYHLVlaDLSIG 130

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 102 ILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSFTLSTLTTTQEQ--MWlvlpTW 179
Cdd:CHL00032  131 VFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKygFW----GW 206

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 180 PL------TMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTILFFGAFHNPL--- 250
Cdd:CHL00032  207 NLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSIpyi 286

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1693291038 251 -LPELYTINFVTK----------TLILTSMFLWV----RASYPRFRYDQLMHLLWKSFLPLTL 298
Cdd:CHL00032  287 fIPELFEINKTGGvfgttigifiTLAKTYLFLFIsittRWTLPRLRMDQLLNLGWKFLLPISL 349
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 17-298 4.67e-49

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 165.48  E-value: 4.67e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  17 VAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAVKLFIKEPLHPLTSSKPMFIIAPTLAFTLALSLWIPLPMPHPLI 96
Cdd:MTH00058   18 VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSYYSGS 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  97 NLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSFTLSTLTTTQEQMWLVL 176
Cdd:MTH00058   98 YSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSGWLSVLLF 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 177 PtwPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTILFFGAFhnpllpelYT 256
Cdd:MTH00058  178 P--LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGG--------FV 247

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1693291038 257 INFVTKTLILtsmFLWVRASYPRFRYDQLMHLLWKSFLPLTL 298
Cdd:MTH00058  248 SIMLLFHLLF---FMWARATLPRVRYDYFVNFFWEYCLVLLI 286
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
19-303 1.69e-30

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 116.82  E-value: 1.69e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  19 FLTLVERKILGYMQLRKGPnivgphGLLQPIADAVKLFIKEPLHPLTSSkPMFIIAPTLAF--TLALSLWIPLPMPHPLI 96
Cdd:COG0650    20 LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETAS-WLFRAAPYVALaaMLLAALLVPVLTTGPPL 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038  97 NLNLGILFILAMSSLAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLAVILLSIMLVNGSFTLSTLTTTQEQ---MW 173
Cdd:COG0650    93 SFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAAhgpLL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693291038 174 LVLPTWPLTMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYSNIILMNSLTTILFFGAFHNPLLPe 253
Cdd:COG0650   173 LSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLFLPWGIALTLL- 251

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1693291038 254 LYTINFVTKTLILTSMFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMW 303
Cdd:COG0650   252 LALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLA 301
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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