|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-225 |
9.22e-179 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 494.93 E-value: 9.22e-179
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSYLYLETWNIGVILLFAT 80
Cdd:MTH00100 44 QILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTV 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 81 MATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHET 160
Cdd:MTH00100 124 MATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHET 203
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1697579124 161 GSNNPLGIDSDADKIPFHPYYTIKDILGMIVLLAVLSGLVLFSPDLLGDPDNYTPANPLNTPPHI 225
Cdd:MTH00100 204 GSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHI 268
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-225 |
3.81e-98 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 290.92 E-value: 3.81e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSY-----LyleTWNIGVI 75
Cdd:COG1290 53 QILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYkkpreL---NWIIGVL 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 76 LLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFH-FILPFIITALVIVHL 154
Cdd:COG1290 130 LLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHL 209
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1697579124 155 LFLHETGSNNPLGID----SDADKIPFHPYYTIKDILGMIVLLAVLSGLVLFSPDllGDPDNYTPANPLNTPPHI 225
Cdd:COG1290 210 WLLHRHGHNNPPGPErkktEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLATPAHI 282
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-163 |
1.66e-83 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 246.90 E-value: 1.66e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSY--LYLETWNIGVILLF 78
Cdd:cd00284 36 QILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLL 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 79 ATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLH 158
Cdd:cd00284 116 LTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLH 195
|
....*
gi 1697579124 159 ETGSN 163
Cdd:cd00284 196 EQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
1-161 |
1.41e-76 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 228.81 E-value: 1.41e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSYLYL--ETWNIGVILLF 78
Cdd:pfam00033 27 QILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGGFSYPreLTWVIGVILLV 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 79 ATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLH 158
Cdd:pfam00033 107 LTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLH 186
|
...
gi 1697579124 159 ETG 161
Cdd:pfam00033 187 ETG 189
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00100 |
cytochrome b; Provisional |
1-225 |
9.22e-179 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 494.93 E-value: 9.22e-179
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSYLYLETWNIGVILLFAT 80
Cdd:MTH00100 44 QILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTV 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 81 MATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHET 160
Cdd:MTH00100 124 MATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHET 203
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1697579124 161 GSNNPLGIDSDADKIPFHPYYTIKDILGMIVLLAVLSGLVLFSPDLLGDPDNYTPANPLNTPPHI 225
Cdd:MTH00100 204 GSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHI 268
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
1-225 |
6.35e-158 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 442.03 E-value: 6.35e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSYLYLETWNIGVILLFAT 80
Cdd:MTH00119 45 QILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLL 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 81 MATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHET 160
Cdd:MTH00119 125 MATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHET 204
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1697579124 161 GSNNPLGIDSDADKIPFHPYYTIKDILGMIVLLAVLSGLVLFSPDLLGDPDNYTPANPLNTPPHI 225
Cdd:MTH00119 205 GSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHI 269
|
|
| CYTB |
MTH00156 |
cytochrome b; Provisional |
1-225 |
2.39e-157 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 439.60 E-value: 2.39e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSYLYLETWNIGVILLFAT 80
Cdd:MTH00156 34 QIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFFFICIYLHIGRGIYYGSYKLKHTWMSGVIILFLV 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 81 MATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHET 160
Cdd:MTH00156 114 MATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQT 193
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1697579124 161 GSNNPLGIDSDADKIPFHPYYTIKDILGMIVLLAVLSGLVLFSPDLLGDPDNYTPANPLNTPPHI 225
Cdd:MTH00156 194 GSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLLGDPENFIPANPLVTPVHI 258
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
1-225 |
6.22e-157 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 439.47 E-value: 6.22e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSYLYLETWNIGVILLFAT 80
Cdd:MTH00131 44 QILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLV 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 81 MATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHET 160
Cdd:MTH00131 124 MMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHET 203
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1697579124 161 GSNNPLGIDSDADKIPFHPYYTIKDILGMIVLLAVLSGLVLFSPDLLGDPDNYTPANPLNTPPHI 225
Cdd:MTH00131 204 GSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLGDPDNFTPANPLVTPPHI 268
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-225 |
8.52e-153 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 428.56 E-value: 8.52e-153
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSYLYLETWNIGVILLFAT 80
Cdd:MTH00191 41 QILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILS 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 81 MATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHET 160
Cdd:MTH00191 121 MATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHET 200
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1697579124 161 GSNNPLGIDSDADKIPFHPYYTIKDILGMIVLLAVLSGLVLFSPDLLGDPDNYTPANPLNTPPHI 225
Cdd:MTH00191 201 GSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLLGDPENFIPANPLVTPVHI 265
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
1-225 |
2.77e-151 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 425.25 E-value: 2.77e-151
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSYLYLETWNIGVILLFAT 80
Cdd:MTH00074 45 QIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLV 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 81 MATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHET 160
Cdd:MTH00074 125 MATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHET 204
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1697579124 161 GSNNPLGIDSDADKIPFHPYYTIKDILGMIVLLAVLSGLVLFSPDLLGDPDNYTPANPLNTPPHI 225
Cdd:MTH00074 205 GSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLLGDPDNFTPANPLVTPPHI 269
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
1-225 |
1.55e-148 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 418.15 E-value: 1.55e-148
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSYLYLETWNIGVILLFAT 80
Cdd:MTH00145 45 QILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLS 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 81 MATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHET 160
Cdd:MTH00145 125 MGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHET 204
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1697579124 161 GSNNPLGIDSDADKIPFHPYYTIKDILGMIVLLAVLSGLVLFSPDLLGDPDNYTPANPLNTPPHI 225
Cdd:MTH00145 205 GSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLLGDPENFIPANPMVTPVHI 269
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
1-225 |
3.13e-139 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 394.81 E-value: 3.13e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSYLYLETWNIGVILLFAT 80
Cdd:MTH00016 45 QILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLT 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 81 MATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHET 160
Cdd:MTH00016 125 MATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQT 204
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1697579124 161 GSNNPLGIDSDADKIPFHPYYTIKDILGMIVLLAVLSGLVLFSPDLLGDPDNYTPANPLNTPPHI 225
Cdd:MTH00016 205 GSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNILGDPENFIPANPLVTPTHI 269
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
1-225 |
1.41e-138 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 392.92 E-value: 1.41e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSYLYLETWNIGVILLFAT 80
Cdd:MTH00034 44 QIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLT 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 81 MATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHET 160
Cdd:MTH00034 124 MLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQT 203
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1697579124 161 GSNNPLGIDSDADKIPFHPYYTIKDILGMIVLLAVLSGLVLFSPDLLGDPDNYTPANPLNTPPHI 225
Cdd:MTH00034 204 GSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTALNDPENFIPANPLVTPPHI 268
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-225 |
1.39e-119 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 344.98 E-value: 1.39e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSYLYLETWNIGVILLFAT 80
Cdd:MTH00224 45 QVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILT 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 81 MATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHET 160
Cdd:MTH00224 125 MATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQT 204
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1697579124 161 GSNNPLGIDSDADKIPFHPYYTIKDILGMIVLLAVLSGLVLFSPDLLGDPDNYTPANPLNTPPHI 225
Cdd:MTH00224 205 GSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFTDPENFLMANPLVTPIHI 269
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-225 |
5.51e-117 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 338.21 E-value: 5.51e-117
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSYLYLETWNIGVILLFAT 80
Cdd:MTH00022 43 QIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLT 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 81 MATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHET 160
Cdd:MTH00022 123 MATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVD 202
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1697579124 161 GSNNPLGIDSDADKIPFHPYYTIKDILGMIVLLAVLSGLVLFSPDLLGDPDNYTPANPLNTPPHI 225
Cdd:MTH00022 203 GSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFIQANSLVTPVHI 267
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-225 |
4.37e-114 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 330.90 E-value: 4.37e-114
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSYLYLETWNIGVILLFAT 80
Cdd:MTH00053 45 QIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLM 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 81 MATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHET 160
Cdd:MTH00053 125 ILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHED 204
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1697579124 161 GSNNPLGIDSDADKIPFHPYYTIKDILGMIVLLAVLSGLVLFSPDLLGDPDNYTPANPLNTPPHI 225
Cdd:MTH00053 205 GSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFKQANPLVTPVHI 269
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-225 |
3.81e-98 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 290.92 E-value: 3.81e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSY-----LyleTWNIGVI 75
Cdd:COG1290 53 QILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLFFAAVYLHMFRGFFYGAYkkpreL---NWIIGVL 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 76 LLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFH-FILPFIITALVIVHL 154
Cdd:COG1290 130 LLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHvLLLPALLLALVVLHL 209
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1697579124 155 LFLHETGSNNPLGID----SDADKIPFHPYYTIKDILGMIVLLAVLSGLVLFSPDllGDPDNYTPANPLNTPPHI 225
Cdd:COG1290 210 WLLHRHGHNNPPGPErkktEKVDGVPFHPYYTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLATPAHI 282
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
1-225 |
5.25e-88 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 264.88 E-value: 5.25e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSYLYLETWNIGVILLFAT 80
Cdd:MTH00033 41 QILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVYCHIGRGLYYGGYSRVLTWIVGVLIFFIM 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 81 MATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHET 160
Cdd:MTH00033 121 MLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEK 200
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1697579124 161 GSNNPLGIDSDADKIPFHPYYTIKDILGMIVLLAVLS--GLVLFSPDLLGDPDNYTPANPLNTPPHI 225
Cdd:MTH00033 201 GSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFViiGIEPRIETLLQDPENFIQANPLVTPVHI 267
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
1-225 |
1.32e-83 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 252.55 E-value: 1.32e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSYLYLETWNIGVILLFAT 80
Cdd:MTH00086 33 QILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHIFKGLFMMSYRLKKVWISGLTIYLLV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 81 MATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHET 160
Cdd:MTH00086 113 MMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFFFVLHFLLPWGLLVLVLFHLIFLHST 192
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1697579124 161 GSNNPLGIDSDADKIPFHPYYTIKDILGMIVLLaVLSGLVLFSPDLLGDPDNYTPANPLNTPPHI 225
Cdd:MTH00086 193 GSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWL-VFIIFSLFYPFNLGDPEMFIEADPMMSPVHI 256
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
1-163 |
1.66e-83 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 246.90 E-value: 1.66e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSY--LYLETWNIGVILLF 78
Cdd:cd00284 36 QILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLL 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 79 ATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLH 158
Cdd:cd00284 116 LTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLH 195
|
....*
gi 1697579124 159 ETGSN 163
Cdd:cd00284 196 EQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
1-161 |
1.41e-76 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 228.81 E-value: 1.41e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSYLYL--ETWNIGVILLF 78
Cdd:pfam00033 27 QILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLHIFRGLYYGGFSYPreLTWVIGVILLV 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 79 ATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLH 158
Cdd:pfam00033 107 LTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLH 186
|
...
gi 1697579124 159 ETG 161
Cdd:pfam00033 187 ETG 189
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
1-225 |
3.34e-67 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 210.61 E-value: 3.34e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSYLYLETWNIGVILLFAT 80
Cdd:MTH00046 35 QVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLFILLFIHMGRALYYSSYSKKGVWNVGFILYLLV 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 81 MATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVIVHLLFLHET 160
Cdd:MTH00046 115 MVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKS 194
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1697579124 161 GSNNPLGI-DSDADKIPFHPYYTIKDILGMIVLLAVLSGLVLFSPDLLGDPDNYTPANPLNTPPHI 225
Cdd:MTH00046 195 GSSNPLFSsNGYSDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLVLDIEAYLEADPLVTPVSI 260
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
45-210 |
1.05e-49 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 159.71 E-value: 1.05e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 45 SMFFACLFLHVGRGLYYGSYLYLE--TWNIGVILLFATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIW 122
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 123 GGFSVDKATLTRFFAFHF-ILPFIITALVIVHLLFLHETGSNNPLGIDSDADKIPFHPYYTIKDILGMIVLLAVLSGLVL 201
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 1697579124 202 FSPDLLGDP 210
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
1-166 |
6.72e-40 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 136.38 E-value: 6.72e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSYLYLE--TWNIGVILLF 78
Cdd:PRK03735 55 QILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRelNWVVGVLIFF 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 79 ATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFH-FILPFIITALVIVHLLFL 157
Cdd:PRK03735 135 VTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWALAVLMLAHFLMI 214
|
....*....
gi 1697579124 158 HETGSNNPL 166
Cdd:PRK03735 215 RKQGISGPL 223
|
|
| petB |
CHL00070 |
cytochrome b6 |
1-166 |
3.71e-34 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 121.37 E-value: 3.71e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 1 QILTGLFLAMHYTADTTTAFSSVTHICRDVNYGWVIRYLHANGASMFFACLFLHVGRGLYYGSYLYLE--TWNIGVILLF 78
Cdd:CHL00070 47 QVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRelTWVTGVVLAV 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1697579124 79 ATMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVEWIWGGFSVDKATLTRFFAFH-FILPFIITALVIVHLLFL 157
Cdd:CHL00070 127 LTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSLHtFVLPLLTAVFMLMHFLMI 206
|
....*....
gi 1697579124 158 HETGSNNPL 166
Cdd:CHL00070 207 RKQGISGPL 215
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
164-225 |
2.29e-17 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 75.76 E-value: 2.29e-17
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1697579124 164 NPLGIDSDADKIPFHPYYTIKDILGMIVLLAVLSGLVLFSPDLLGDPDNYTPANPLNTPPHI 225
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHI 62
|
|
|