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Conserved domains on  [gi|1720398602|ref|XP_030106039|]
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ATP synthase F(0) complex subunit C3, mitochondrial isoform X2 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK13469 super family cl00466
F0F1 ATP synthase subunit C; Provisional
67-104 5.80e-14

F0F1 ATP synthase subunit C; Provisional


The actual alignment was detected with superfamily member MTH00222:

Pssm-ID: 469780 [Multi-domain]  Cd Length: 77  Bit Score: 61.40  E-value: 5.80e-14
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1720398602  67 DIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYAR 104
Cdd:MTH00222    3 EILTAAKFVGAGAATIGAAGSGAGIGTVFGNLIIGYAR 40
 
Name Accession Description Interval E-value
ATP9 MTH00222
ATP synthase F0 subunit 9; Provisional
67-104 5.80e-14

ATP synthase F0 subunit 9; Provisional


Pssm-ID: 164765 [Multi-domain]  Cd Length: 77  Bit Score: 61.40  E-value: 5.80e-14
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1720398602  67 DIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYAR 104
Cdd:MTH00222    3 EILTAAKFVGAGAATIGAAGSGAGIGTVFGNLIIGYAR 40
ATP-synt_Fo_c_ATP5G3 cd18182
ATP synthase F(0) complex subunit C3 (ATP5G3) and similar proteins; ATP5G3 (also called ATP ...
73-104 1.84e-09

ATP synthase F(0) complex subunit C3 (ATP5G3) and similar proteins; ATP5G3 (also called ATP synthase lipid-binding protein, ATP synthase proteolipid P3, ATP synthase proton-transporting mitochondrial F(o) complex subunit C3, ATPase protein 9, or ATPase subunit c) transports protons across the inner mitochondrial membrane to the F1-ATPase protruding on the matrix side, resulting in the generation of ATP.


Pssm-ID: 349422  Cd Length: 65  Bit Score: 49.43  E-value: 1.84e-09
                          10        20        30
                  ....*....|....*....|....*....|..
gi 1720398602  73 KFIGAGAATVGVAGSGAGIGTVFGSLIIGYAR 104
Cdd:cd18182     1 KYIGAGLATIGLAGAGIGIGNVFGSLINGVAR 32
 
Name Accession Description Interval E-value
ATP9 MTH00222
ATP synthase F0 subunit 9; Provisional
67-104 5.80e-14

ATP synthase F0 subunit 9; Provisional


Pssm-ID: 164765 [Multi-domain]  Cd Length: 77  Bit Score: 61.40  E-value: 5.80e-14
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1720398602  67 DIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYAR 104
Cdd:MTH00222    3 EILTAAKFVGAGAATIGAAGSGAGIGTVFGNLIIGYAR 40
ATP-synt_Fo_c_ATP5G3 cd18182
ATP synthase F(0) complex subunit C3 (ATP5G3) and similar proteins; ATP5G3 (also called ATP ...
73-104 1.84e-09

ATP synthase F(0) complex subunit C3 (ATP5G3) and similar proteins; ATP5G3 (also called ATP synthase lipid-binding protein, ATP synthase proteolipid P3, ATP synthase proton-transporting mitochondrial F(o) complex subunit C3, ATPase protein 9, or ATPase subunit c) transports protons across the inner mitochondrial membrane to the F1-ATPase protruding on the matrix side, resulting in the generation of ATP.


Pssm-ID: 349422  Cd Length: 65  Bit Score: 49.43  E-value: 1.84e-09
                          10        20        30
                  ....*....|....*....|....*....|..
gi 1720398602  73 KFIGAGAATVGVAGSGAGIGTVFGSLIIGYAR 104
Cdd:cd18182     1 KYIGAGLATIGLAGAGIGIGNVFGSLINGVAR 32
PRK07558 PRK07558
F0F1 ATP synthase subunit C; Validated
71-104 2.81e-05

F0F1 ATP synthase subunit C; Validated


Pssm-ID: 181027  Cd Length: 74  Bit Score: 38.80  E-value: 2.81e-05
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1720398602  71 AAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYAR 104
Cdd:PRK07558    5 ALKFIGAGLACIGMAGAALGVGNIFGNYLSGALR 38
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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