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Conserved domains on  [gi|1750469449|gb|KAA8515428|]
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hypothetical protein F0562_018961 [Nyssa sinensis]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
B_lectin pfam01453
D-mannose binding lectin; These proteins include mannose-specific lectins from plants as well ...
 497-606 3.93e-45

D-mannose binding lectin; These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria.


:

Pssm-ID: 460217  Cd Length: 105  Bit Score: 157.65  E-value: 3.93e-45
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  497 TVVWVANRDSPINDTSGILSIDRTGNLVIHDQrqNNIPLWSTNASALSAAAANNcsaQLLDSGNLVLFQGDSKRVVAWQS 576
Cdd:pfam01453    1 TVVWVANRDNPINDSSGVLTISNDGNLVLLNG--SNSVVWSTNNSSSSANNTVA---QLLDSGNLVLSDDSNSGNVLWQS 75

                           90       100       110
                   ....*....|....*....|....*....|
gi 1750469449  577 FDYPTNTLLPDMKLGADRRTGLNWFLTSWK 606
Cdd:pfam01453   76 FDHPTDTLLPGMKLGWNKRTGLNRRLTSWK 105
S_locus_glycop pfam00954
S-locus glycoprotein domain; In Brassicaceae, self-incompatible plants have a self/non-self ...
 638-749 3.39e-40

S-locus glycoprotein domain; In Brassicaceae, self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles. This region is inferred to be a domain due to it having other domains adjacent to it.


:

Pssm-ID: 395761  Cd Length: 111  Bit Score: 143.99  E-value: 3.39e-40
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  638 WRTGPWNGIRWSGVPEMNPNFIFNVIYV-DNDDEVSVIYGIHNASIFSRLMVNETGVVQRLTWHDGGRGWVGFWSAPKDT 716
Cdd:pfam00954    1 WRSGPWNGTRFTGIPEMDPNSYYVYPFTdDNNGEVSFSYSVTRNSKLSRFTLTSEGSLKRFTWIENGQDWNLFWSAPKDS 80

                           90       100       110
                   ....*....|....*....|....*....|...
gi 1750469449  717 CDEYNGCGAYGDCDSRNASAfdCTCLPGFEPKS 749
Cdd:pfam00954   81 CDVYGRCGPFGLCNSSNSPK--CKCLKGFVPKS 111
B_lectin pfam01453
D-mannose binding lectin; These proteins include mannose-specific lectins from plants as well ...
 65-137 6.77e-30

D-mannose binding lectin; These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria.


:

Pssm-ID: 460217  Cd Length: 105  Bit Score: 114.12  E-value: 6.77e-30
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1750469449   65 IWKSclNIQNISSKATVAQLLDSGNLVMRDekDQNAENYLWQSFDHPSDTLLAGTKLGRDMKTGLNRYLRSWK 137
Cdd:pfam01453   37 VWST--NNSSSSANNTVAQLLDSGNLVLSD--DSNSGNVLWQSFDHPTDTLLPGMKLGWNKRTGLNRRLTSWK 105
PAN_AP_plant cd01098
Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted ...
 296-381 1.50e-24

Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.


:

Pssm-ID: 238531  Cd Length: 84  Bit Score: 98.28  E-value: 1.50e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  296 PLNCSKGE---GFIKIEGVKMPDLlqFWMNTSMTLKDCEEKCLKNCSCTAYAYSDatgeGNGSCLMWYGDLIDiRRIAET 372
Cdd:cd01098      2 PLNCGGDGstdGFLKLPDVKLPDN--ASAITAISLEECREACLSNCSCTAYAYNN----GSGGCLLWNGLLNN-LRSLSS 74


                   ....*....
gi 1750469449  373 GNRNFYIRV 381
Cdd:cd01098     75 GGGTLYLRL 83
S_locus_glycop super family cl03036
S-locus glycoprotein domain; In Brassicaceae, self-incompatible plants have a self/non-self ...
 169-278 1.67e-24

S-locus glycoprotein domain; In Brassicaceae, self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles. This region is inferred to be a domain due to it having other domains adjacent to it.


The actual alignment was detected with superfamily member pfam00954:

Pssm-ID: 395761  Cd Length: 111  Bit Score: 99.31  E-value: 1.67e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  169 FRSGPWDGVKFSGIP-LLPNFIF-NPKVISNSEEAYYEYyGHYNESAFTRSVLSYTRSIQRYVWNNITLEWFIMNSLPSD 246
Cdd:pfam00954    1 WRSGPWNGTRFTGIPeMDPNSYYvYPFTDDNNGEVSFSY-SVTRNSKLSRFTLTSEGSLKRFTWIENGQDWNLFWSAPKD 79

                           90       100       110
                   ....*....|....*....|....*....|..
gi 1750469449  247 PCDKYDQCGSNSICTISDPRICSCLTGYIPKS 278
Cdd:pfam00954   80 SCDVYGRCGPFGLCNSSNSPKCKCLKGFVPKS 111
PAN_AP_plant cd01098
Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted ...
 771-851 7.17e-22

Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.


:

Pssm-ID: 238531  Cd Length: 84  Bit Score: 90.57  E-value: 7.17e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  771 CGSG---DGFVKVTNAKVPDTSTAraDLKLGIKACEELCLSNCSCTAYTNADVrgeGSGCMTWYGELVDTRAYTNGGQDL 847
Cdd:cd01098      5 CGGDgstDGFLKLPDVKLPDNASA--ITAISLEECREACLSNCSCTAYAYNNG---SGGCLLWNGLLNNLRSLSSGGGTL 79


                   ....
gi 1750469449  848 YVRV 851
Cdd:cd01098     80 YLRL 83
EF-hand_8 pfam13833
EF-hand domain pair;
1023-1076 4.61e-17

EF-hand domain pair;


:

Pssm-ID: 404678 [Multi-domain]  Cd Length: 54  Bit Score: 75.81  E-value: 4.61e-17
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1750469449 1023 EKEVITFESLKRNSALLGLQDLRDDEIQSMVREGDLDGDGALNQMEFCVLMFRL 1076
Cdd:pfam13833    1 EKGVITREELKRALALLGLKDLSEDEVDILFREFDTDGDGYISFDEFCVLLERR 54
 
Name Accession Description Interval E-value
B_lectin pfam01453
D-mannose binding lectin; These proteins include mannose-specific lectins from plants as well ...
 497-606 3.93e-45

D-mannose binding lectin; These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria.


Pssm-ID: 460217  Cd Length: 105  Bit Score: 157.65  E-value: 3.93e-45
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  497 TVVWVANRDSPINDTSGILSIDRTGNLVIHDQrqNNIPLWSTNASALSAAAANNcsaQLLDSGNLVLFQGDSKRVVAWQS 576
Cdd:pfam01453    1 TVVWVANRDNPINDSSGVLTISNDGNLVLLNG--SNSVVWSTNNSSSSANNTVA---QLLDSGNLVLSDDSNSGNVLWQS 75

                           90       100       110
                   ....*....|....*....|....*....|
gi 1750469449  577 FDYPTNTLLPDMKLGADRRTGLNWFLTSWK 606
Cdd:pfam01453   76 FDHPTDTLLPGMKLGWNKRTGLNRRLTSWK 105
S_locus_glycop pfam00954
S-locus glycoprotein domain; In Brassicaceae, self-incompatible plants have a self/non-self ...
 638-749 3.39e-40

S-locus glycoprotein domain; In Brassicaceae, self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles. This region is inferred to be a domain due to it having other domains adjacent to it.


Pssm-ID: 395761  Cd Length: 111  Bit Score: 143.99  E-value: 3.39e-40
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  638 WRTGPWNGIRWSGVPEMNPNFIFNVIYV-DNDDEVSVIYGIHNASIFSRLMVNETGVVQRLTWHDGGRGWVGFWSAPKDT 716
Cdd:pfam00954    1 WRSGPWNGTRFTGIPEMDPNSYYVYPFTdDNNGEVSFSYSVTRNSKLSRFTLTSEGSLKRFTWIENGQDWNLFWSAPKDS 80

                           90       100       110
                   ....*....|....*....|....*....|...
gi 1750469449  717 CDEYNGCGAYGDCDSRNASAfdCTCLPGFEPKS 749
Cdd:pfam00954   81 CDVYGRCGPFGLCNSSNSPK--CKCLKGFVPKS 111
B_lectin pfam01453
D-mannose binding lectin; These proteins include mannose-specific lectins from plants as well ...
 65-137 6.77e-30

D-mannose binding lectin; These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria.


Pssm-ID: 460217  Cd Length: 105  Bit Score: 114.12  E-value: 6.77e-30
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1750469449   65 IWKSclNIQNISSKATVAQLLDSGNLVMRDekDQNAENYLWQSFDHPSDTLLAGTKLGRDMKTGLNRYLRSWK 137
Cdd:pfam01453   37 VWST--NNSSSSANNTVAQLLDSGNLVLSD--DSNSGNVLWQSFDHPTDTLLPGMKLGWNKRTGLNRRLTSWK 105
B_lectin cd00028
Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat ...
 455-580 1.46e-24

Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.


Pssm-ID: 237995  Cd Length: 116  Bit Score: 99.69  E-value: 1.46e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  455 NQSIKDGDIVISNAKSFALGFFSPDNSTKRYVGIWyYKVSEQTVVWVANRDSPiNDTSGILSIDRTGNLVIHDQRqnNIP 534
Cdd:cd00028      1 SNPLSSGQTLVSSGSLFELGFFKLIMQSRDYNLIL-YKGSSRTVVWVANRDNP-SGSSCTLTLQSDGNLVIYDGS--GTV 76

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*.
gi 1750469449  535 LWstnaSALSAAAANNCSAQLLDSGNLVLFqgDSKRVVAWQSFDYP 580
Cdd:cd00028     77 VW----SSNTTRVNGNYVLVLLDDGNLVLY--DSDGNFLWQSFDYP 116
PAN_AP_plant cd01098
Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted ...
 296-381 1.50e-24

Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.


Pssm-ID: 238531  Cd Length: 84  Bit Score: 98.28  E-value: 1.50e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  296 PLNCSKGE---GFIKIEGVKMPDLlqFWMNTSMTLKDCEEKCLKNCSCTAYAYSDatgeGNGSCLMWYGDLIDiRRIAET 372
Cdd:cd01098      2 PLNCGGDGstdGFLKLPDVKLPDN--ASAITAISLEECREACLSNCSCTAYAYNN----GSGGCLLWNGLLNN-LRSLSS 74


                   ....*....
gi 1750469449  373 GNRNFYIRV 381
Cdd:cd01098     75 GGGTLYLRL 83
S_locus_glycop pfam00954
S-locus glycoprotein domain; In Brassicaceae, self-incompatible plants have a self/non-self ...
 169-278 1.67e-24

S-locus glycoprotein domain; In Brassicaceae, self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles. This region is inferred to be a domain due to it having other domains adjacent to it.


Pssm-ID: 395761  Cd Length: 111  Bit Score: 99.31  E-value: 1.67e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  169 FRSGPWDGVKFSGIP-LLPNFIF-NPKVISNSEEAYYEYyGHYNESAFTRSVLSYTRSIQRYVWNNITLEWFIMNSLPSD 246
Cdd:pfam00954    1 WRSGPWNGTRFTGIPeMDPNSYYvYPFTDDNNGEVSFSY-SVTRNSKLSRFTLTSEGSLKRFTWIENGQDWNLFWSAPKD 79

                           90       100       110
                   ....*....|....*....|....*....|..
gi 1750469449  247 PCDKYDQCGSNSICTISDPRICSCLTGYIPKS 278
Cdd:pfam00954   80 SCDVYGRCGPFGLCNSSNSPKCKCLKGFVPKS 111
B_lectin smart00108
Bulb-type mannose-specific lectin;
451-579 2.97e-23

Bulb-type mannose-specific lectin;


Pssm-ID: 214519 [Multi-domain]  Cd Length: 114  Bit Score: 95.84  E-value: 2.97e-23
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449   451 TITSNQSIkdgdivISNAKSFALGFFSPDNStKRYVGIWYyKVSEQTVVWVANRDSPINDtSGILSIDRTGNLVIHDQRq 530
Cdd:smart00108    3 TLSSGQTL------VSGNSLFELGFFTLIMQ-NDYNLILY-KSSSRTVVWVANRDNPVSD-SCTLTLQSDGNLVLYDGD- 72

                            90       100       110       120
                    ....*....|....*....|....*....|....*....|....*....
gi 1750469449   531 nNIPLWstnaSALSAAAANNCSAQLLDSGNLVLFqgDSKRVVAWQSFDY 579
Cdd:smart00108   73 -GRVVW----SSNTTGANGNYVLVLLDDGNLVIY--DSDGNFLWQSFDY 114
PAN_AP_plant cd01098
Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted ...
 771-851 7.17e-22

Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.


Pssm-ID: 238531  Cd Length: 84  Bit Score: 90.57  E-value: 7.17e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  771 CGSG---DGFVKVTNAKVPDTSTAraDLKLGIKACEELCLSNCSCTAYTNADVrgeGSGCMTWYGELVDTRAYTNGGQDL 847
Cdd:cd01098      5 CGGDgstDGFLKLPDVKLPDNASA--ITAISLEECREACLSNCSCTAYAYNNG---SGGCLLWNGLLNNLRSLSSGGGTL 79


                   ....
gi 1750469449  848 YVRV 851
Cdd:cd01098     80 YLRL 83
PAN_2 pfam08276
PAN-like domain;
772-837 7.58e-22

PAN-like domain;


Pssm-ID: 429893  Cd Length: 67  Bit Score: 90.16  E-value: 7.58e-22
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1750469449  772 GSGDGFVKVTNAKVPDTSTARADLKLGIKACEELCLSNCSCTAYTNADVRGeGSGCMTWYGELVDT 837
Cdd:pfam08276    3 SGGDGFLRLKNVKLPDTTTASVDQNITLKECRQRCLSNCSCTAYAYADIRG-GIGCLIWTGDLVDM 67
PAN_2 pfam08276
PAN-like domain;
299-366 1.55e-20

PAN-like domain;


Pssm-ID: 429893  Cd Length: 67  Bit Score: 86.30  E-value: 1.55e-20
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1750469449  299 CSKGE-GFIKIEGVKMPDLLQFWMNTSMTLKDCEEKCLKNCSCTAYAYSDATGeGNGsCLMWYGDLIDI 366
Cdd:pfam08276    1 CTSGGdGFLRLKNVKLPDTTTASVDQNITLKECRQRCLSNCSCTAYAYADIRG-GIG-CLIWTGDLVDM 67
EF-hand_8 pfam13833
EF-hand domain pair;
1023-1076 4.61e-17

EF-hand domain pair;


Pssm-ID: 404678 [Multi-domain]  Cd Length: 54  Bit Score: 75.81  E-value: 4.61e-17
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1750469449 1023 EKEVITFESLKRNSALLGLQDLRDDEIQSMVREGDLDGDGALNQMEFCVLMFRL 1076
Cdd:pfam13833    1 EKGVITREELKRALALLGLKDLSEDEVDILFREFDTDGDGYISFDEFCVLLERR 54
B_lectin cd00028
Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat ...
 33-111 4.37e-14

Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.


Pssm-ID: 237995  Cd Length: 116  Bit Score: 69.65  E-value: 4.37e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449   33 QSINDGQTLVSAGEKFQLGFFSPGNSRNRYLGIW-------------------KSC-LNIQ------------------N 74
Cdd:cd00028      2 NPLSSGQTLVSSGSLFELGFFKLIMQSRDYNLILykgssrtvvwvanrdnpsgSSCtLTLQsdgnlviydgsgtvvwssN 81

                           90       100       110
                   ....*....|....*....|....*....|....*....
gi 1750469449   75 ISSK--ATVAQLLDSGNLVMRDEKDqnaeNYLWQSFDHP 111
Cdd:cd00028     82 TTRVngNYVLVLLDDGNLVLYDSDG----NFLWQSFDYP 116
PTZ00183 PTZ00183
centrin; Provisional
 992-1073 1.01e-11

centrin; Provisional


Pssm-ID: 185503 [Multi-domain]  Cd Length: 158  Bit Score: 64.33  E-value: 1.01e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  992 FEDLLPVMAERLGGEGLIEELCKGFRLLMDGEKEVITFESLKRNSALLGlQDLRDDEIQSMVREGDLDGDGALNQMEFCV 1071
Cdd:PTZ00183    72 FEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELG-ETITDEELQEMIDEADRNGDGEISEEEFYR 150


                   ..
gi 1750469449 1072 LM 1073
Cdd:PTZ00183   151 IM 152
B_lectin smart00108
Bulb-type mannose-specific lectin;
33-110 2.10e-11

Bulb-type mannose-specific lectin;


Pssm-ID: 214519 [Multi-domain]  Cd Length: 114  Bit Score: 61.94  E-value: 2.10e-11
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449    33 QSINDGQTLVSAGEKFQLGFFSPGNSrNRYLGIW-------------------KSC-LNIQ------------------N 74
Cdd:smart00108    2 NTLSSGQTLVSGNSLFELGFFTLIMQ-NDYNLILyksssrtvvwvanrdnpvsDSCtLTLQsdgnlvlydgdgrvvwssN 80

                            90       100       110
                    ....*....|....*....|....*....|....*...
gi 1750469449    75 ISSK--ATVAQLLDSGNLVMRDEKDqnaeNYLWQSFDH 110
Cdd:smart00108   81 TTGAngNYVLVLLDDGNLVIYDSDG----NFLWQSFDY 114
PAN_AP smart00473
divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans ...
 304-381 5.30e-09

divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.


Pssm-ID: 214680  Cd Length: 78  Bit Score: 53.74  E-value: 5.30e-09
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449   304 GFIKIEGVKMPDLLQFWMNtSMTLKDCEEKCLK-NCSCTAYAYSdatgEGNGSCLMWY-GDLIDIrRIAETGNRNFYIRV 381
Cdd:smart00473    5 CFVRLPNTKLPGFSRIVIS-VASLEECASKCLNsNCSCRSFTYN----NGTKGCLLWSeSSLGDA-RLFPSGGVDLYEKI 78
PAN_AP smart00473
divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans ...
 773-851 1.89e-08

divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.


Pssm-ID: 214680  Cd Length: 78  Bit Score: 52.20  E-value: 1.89e-08
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449   773 SGDGFVKVTNAKVPDTSTARADLKlGIKACEELCL-SNCSCTAYTNadvRGEGSGCMTWY-GELVDTRAYTNGGQDLYVR 850
Cdd:smart00473    2 SDDCFVRLPNTKLPGFSRIVISVA-SLEECASKCLnSNCSCRSFTY---NNGTKGCLLWSeSSLGDARLFPSGGVDLYEK 77


                    .
gi 1750469449   851 V 851
Cdd:smart00473   78 I 78
PHA02732 PHA02732
hypothetical protein; Provisional
 559-667 4.72e-04

hypothetical protein; Provisional


Pssm-ID: 165099 [Multi-domain]  Cd Length: 1467  Bit Score: 44.36  E-value: 4.72e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  559 GNLVLFQGD----SKRVVAWqSFDYPTNTL-----LPDMKLGADRRTGLNWFltswksrdDPGTGEYSYKMDLSGFPEFF 629
Cdd:PHA02732   900 GGLLVLDGSaaaaPGQYIAW-RFMPSSNTLnvtihITSFPEGAQYNPGISIY--------SPNIGDQPSDNAISGFLAIL 970

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1750469449  630 LYKGSDPVWRTGP---WNGIRWSGVPEMNPN--FIFNVIYVDN 667
Cdd:PHA02732   971 VDFYDGNIWYHGPnanWQELRSSALPQPNPAypFTFSVIFTEN 1013
EFh cd00051
EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal ...
 1016-1073 2.95e-03

EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.


Pssm-ID: 238008 [Multi-domain]  Cd Length: 63  Bit Score: 37.14  E-value: 2.95e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1750469449 1016 FRLL---MDGekeVITFESLKRNSALLGLQDLrDDEIQSMVREGDLDGDGALNQMEFCVLM 1073
Cdd:cd00051      6 FRLFdkdGDG---TISADELKAALKSLGEGLS-EEEIDEMIREVDKDGDGKIDFEEFLELM 62
 
Name Accession Description Interval E-value
B_lectin pfam01453
D-mannose binding lectin; These proteins include mannose-specific lectins from plants as well ...
 497-606 3.93e-45

D-mannose binding lectin; These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria.


Pssm-ID: 460217  Cd Length: 105  Bit Score: 157.65  E-value: 3.93e-45
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  497 TVVWVANRDSPINDTSGILSIDRTGNLVIHDQrqNNIPLWSTNASALSAAAANNcsaQLLDSGNLVLFQGDSKRVVAWQS 576
Cdd:pfam01453    1 TVVWVANRDNPINDSSGVLTISNDGNLVLLNG--SNSVVWSTNNSSSSANNTVA---QLLDSGNLVLSDDSNSGNVLWQS 75

                           90       100       110
                   ....*....|....*....|....*....|
gi 1750469449  577 FDYPTNTLLPDMKLGADRRTGLNWFLTSWK 606
Cdd:pfam01453   76 FDHPTDTLLPGMKLGWNKRTGLNRRLTSWK 105
S_locus_glycop pfam00954
S-locus glycoprotein domain; In Brassicaceae, self-incompatible plants have a self/non-self ...
 638-749 3.39e-40

S-locus glycoprotein domain; In Brassicaceae, self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles. This region is inferred to be a domain due to it having other domains adjacent to it.


Pssm-ID: 395761  Cd Length: 111  Bit Score: 143.99  E-value: 3.39e-40
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  638 WRTGPWNGIRWSGVPEMNPNFIFNVIYV-DNDDEVSVIYGIHNASIFSRLMVNETGVVQRLTWHDGGRGWVGFWSAPKDT 716
Cdd:pfam00954    1 WRSGPWNGTRFTGIPEMDPNSYYVYPFTdDNNGEVSFSYSVTRNSKLSRFTLTSEGSLKRFTWIENGQDWNLFWSAPKDS 80

                           90       100       110
                   ....*....|....*....|....*....|...
gi 1750469449  717 CDEYNGCGAYGDCDSRNASAfdCTCLPGFEPKS 749
Cdd:pfam00954   81 CDVYGRCGPFGLCNSSNSPK--CKCLKGFVPKS 111
B_lectin pfam01453
D-mannose binding lectin; These proteins include mannose-specific lectins from plants as well ...
 65-137 6.77e-30

D-mannose binding lectin; These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria.


Pssm-ID: 460217  Cd Length: 105  Bit Score: 114.12  E-value: 6.77e-30
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1750469449   65 IWKSclNIQNISSKATVAQLLDSGNLVMRDekDQNAENYLWQSFDHPSDTLLAGTKLGRDMKTGLNRYLRSWK 137
Cdd:pfam01453   37 VWST--NNSSSSANNTVAQLLDSGNLVLSD--DSNSGNVLWQSFDHPTDTLLPGMKLGWNKRTGLNRRLTSWK 105
B_lectin cd00028
Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat ...
 455-580 1.46e-24

Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.


Pssm-ID: 237995  Cd Length: 116  Bit Score: 99.69  E-value: 1.46e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  455 NQSIKDGDIVISNAKSFALGFFSPDNSTKRYVGIWyYKVSEQTVVWVANRDSPiNDTSGILSIDRTGNLVIHDQRqnNIP 534
Cdd:cd00028      1 SNPLSSGQTLVSSGSLFELGFFKLIMQSRDYNLIL-YKGSSRTVVWVANRDNP-SGSSCTLTLQSDGNLVIYDGS--GTV 76

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*.
gi 1750469449  535 LWstnaSALSAAAANNCSAQLLDSGNLVLFqgDSKRVVAWQSFDYP 580
Cdd:cd00028     77 VW----SSNTTRVNGNYVLVLLDDGNLVLY--DSDGNFLWQSFDYP 116
PAN_AP_plant cd01098
Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted ...
 296-381 1.50e-24

Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.


Pssm-ID: 238531  Cd Length: 84  Bit Score: 98.28  E-value: 1.50e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  296 PLNCSKGE---GFIKIEGVKMPDLlqFWMNTSMTLKDCEEKCLKNCSCTAYAYSDatgeGNGSCLMWYGDLIDiRRIAET 372
Cdd:cd01098      2 PLNCGGDGstdGFLKLPDVKLPDN--ASAITAISLEECREACLSNCSCTAYAYNN----GSGGCLLWNGLLNN-LRSLSS 74


                   ....*....
gi 1750469449  373 GNRNFYIRV 381
Cdd:cd01098     75 GGGTLYLRL 83
S_locus_glycop pfam00954
S-locus glycoprotein domain; In Brassicaceae, self-incompatible plants have a self/non-self ...
 169-278 1.67e-24

S-locus glycoprotein domain; In Brassicaceae, self-incompatible plants have a self/non-self recognition system. This is sporophytically controlled by multiple alleles at a single locus (S). S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles. This region is inferred to be a domain due to it having other domains adjacent to it.


Pssm-ID: 395761  Cd Length: 111  Bit Score: 99.31  E-value: 1.67e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  169 FRSGPWDGVKFSGIP-LLPNFIF-NPKVISNSEEAYYEYyGHYNESAFTRSVLSYTRSIQRYVWNNITLEWFIMNSLPSD 246
Cdd:pfam00954    1 WRSGPWNGTRFTGIPeMDPNSYYvYPFTDDNNGEVSFSY-SVTRNSKLSRFTLTSEGSLKRFTWIENGQDWNLFWSAPKD 79

                           90       100       110
                   ....*....|....*....|....*....|..
gi 1750469449  247 PCDKYDQCGSNSICTISDPRICSCLTGYIPKS 278
Cdd:pfam00954   80 SCDVYGRCGPFGLCNSSNSPKCKCLKGFVPKS 111
B_lectin smart00108
Bulb-type mannose-specific lectin;
451-579 2.97e-23

Bulb-type mannose-specific lectin;


Pssm-ID: 214519 [Multi-domain]  Cd Length: 114  Bit Score: 95.84  E-value: 2.97e-23
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449   451 TITSNQSIkdgdivISNAKSFALGFFSPDNStKRYVGIWYyKVSEQTVVWVANRDSPINDtSGILSIDRTGNLVIHDQRq 530
Cdd:smart00108    3 TLSSGQTL------VSGNSLFELGFFTLIMQ-NDYNLILY-KSSSRTVVWVANRDNPVSD-SCTLTLQSDGNLVLYDGD- 72

                            90       100       110       120
                    ....*....|....*....|....*....|....*....|....*....
gi 1750469449   531 nNIPLWstnaSALSAAAANNCSAQLLDSGNLVLFqgDSKRVVAWQSFDY 579
Cdd:smart00108   73 -GRVVW----SSNTTGANGNYVLVLLDDGNLVIY--DSDGNFLWQSFDY 114
PAN_AP_plant cd01098
Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted ...
 771-851 7.17e-22

Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.


Pssm-ID: 238531  Cd Length: 84  Bit Score: 90.57  E-value: 7.17e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  771 CGSG---DGFVKVTNAKVPDTSTAraDLKLGIKACEELCLSNCSCTAYTNADVrgeGSGCMTWYGELVDTRAYTNGGQDL 847
Cdd:cd01098      5 CGGDgstDGFLKLPDVKLPDNASA--ITAISLEECREACLSNCSCTAYAYNNG---SGGCLLWNGLLNNLRSLSSGGGTL 79


                   ....
gi 1750469449  848 YVRV 851
Cdd:cd01098     80 YLRL 83
PAN_2 pfam08276
PAN-like domain;
772-837 7.58e-22

PAN-like domain;


Pssm-ID: 429893  Cd Length: 67  Bit Score: 90.16  E-value: 7.58e-22
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1750469449  772 GSGDGFVKVTNAKVPDTSTARADLKLGIKACEELCLSNCSCTAYTNADVRGeGSGCMTWYGELVDT 837
Cdd:pfam08276    3 SGGDGFLRLKNVKLPDTTTASVDQNITLKECRQRCLSNCSCTAYAYADIRG-GIGCLIWTGDLVDM 67
PAN_2 pfam08276
PAN-like domain;
299-366 1.55e-20

PAN-like domain;


Pssm-ID: 429893  Cd Length: 67  Bit Score: 86.30  E-value: 1.55e-20
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1750469449  299 CSKGE-GFIKIEGVKMPDLLQFWMNTSMTLKDCEEKCLKNCSCTAYAYSDATGeGNGsCLMWYGDLIDI 366
Cdd:pfam08276    1 CTSGGdGFLRLKNVKLPDTTTASVDQNITLKECRQRCLSNCSCTAYAYADIRG-GIG-CLIWTGDLVDM 67
EF-hand_8 pfam13833
EF-hand domain pair;
1023-1076 4.61e-17

EF-hand domain pair;


Pssm-ID: 404678 [Multi-domain]  Cd Length: 54  Bit Score: 75.81  E-value: 4.61e-17
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....
gi 1750469449 1023 EKEVITFESLKRNSALLGLQDLRDDEIQSMVREGDLDGDGALNQMEFCVLMFRL 1076
Cdd:pfam13833    1 EKGVITREELKRALALLGLKDLSEDEVDILFREFDTDGDGYISFDEFCVLLERR 54
B_lectin cd00028
Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat ...
 33-111 4.37e-14

Bulb-type mannose-specific lectin. The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.


Pssm-ID: 237995  Cd Length: 116  Bit Score: 69.65  E-value: 4.37e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449   33 QSINDGQTLVSAGEKFQLGFFSPGNSRNRYLGIW-------------------KSC-LNIQ------------------N 74
Cdd:cd00028      2 NPLSSGQTLVSSGSLFELGFFKLIMQSRDYNLILykgssrtvvwvanrdnpsgSSCtLTLQsdgnlviydgsgtvvwssN 81

                           90       100       110
                   ....*....|....*....|....*....|....*....
gi 1750469449   75 ISSK--ATVAQLLDSGNLVMRDEKDqnaeNYLWQSFDHP 111
Cdd:cd00028     82 TTRVngNYVLVLLDDGNLVLYDSDG----NFLWQSFDYP 116
PTZ00183 PTZ00183
centrin; Provisional
 992-1073 1.01e-11

centrin; Provisional


Pssm-ID: 185503 [Multi-domain]  Cd Length: 158  Bit Score: 64.33  E-value: 1.01e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  992 FEDLLPVMAERLGGEGLIEELCKGFRLLMDGEKEVITFESLKRNSALLGlQDLRDDEIQSMVREGDLDGDGALNQMEFCV 1071
Cdd:PTZ00183    72 FEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELG-ETITDEELQEMIDEADRNGDGEISEEEFYR 150


                   ..
gi 1750469449 1072 LM 1073
Cdd:PTZ00183   151 IM 152
B_lectin smart00108
Bulb-type mannose-specific lectin;
33-110 2.10e-11

Bulb-type mannose-specific lectin;


Pssm-ID: 214519 [Multi-domain]  Cd Length: 114  Bit Score: 61.94  E-value: 2.10e-11
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449    33 QSINDGQTLVSAGEKFQLGFFSPGNSrNRYLGIW-------------------KSC-LNIQ------------------N 74
Cdd:smart00108    2 NTLSSGQTLVSGNSLFELGFFTLIMQ-NDYNLILyksssrtvvwvanrdnpvsDSCtLTLQsdgnlvlydgdgrvvwssN 80

                            90       100       110
                    ....*....|....*....|....*....|....*...
gi 1750469449    75 ISSK--ATVAQLLDSGNLVMRDEKDqnaeNYLWQSFDH 110
Cdd:smart00108   81 TTGAngNYVLVLLDDGNLVIYDSDG----NFLWQSFDY 114
PAN_AP smart00473
divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans ...
 304-381 5.30e-09

divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.


Pssm-ID: 214680  Cd Length: 78  Bit Score: 53.74  E-value: 5.30e-09
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449   304 GFIKIEGVKMPDLLQFWMNtSMTLKDCEEKCLK-NCSCTAYAYSdatgEGNGSCLMWY-GDLIDIrRIAETGNRNFYIRV 381
Cdd:smart00473    5 CFVRLPNTKLPGFSRIVIS-VASLEECASKCLNsNCSCRSFTYN----NGTKGCLLWSeSSLGDA-RLFPSGGVDLYEKI 78
PAN_AP smart00473
divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans ...
 773-851 1.89e-08

divergent subfamily of APPLE domains; Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.


Pssm-ID: 214680  Cd Length: 78  Bit Score: 52.20  E-value: 1.89e-08
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449   773 SGDGFVKVTNAKVPDTSTARADLKlGIKACEELCL-SNCSCTAYTNadvRGEGSGCMTWY-GELVDTRAYTNGGQDLYVR 850
Cdd:smart00473    2 SDDCFVRLPNTKLPGFSRIVISVA-SLEECASKCLnSNCSCRSFTY---NNGTKGCLLWSeSSLGDARLFPSGGVDLYEK 77


                    .
gi 1750469449   851 V 851
Cdd:smart00473   78 I 78
PTZ00184 PTZ00184
calmodulin; Provisional
 992-1075 1.30e-06

calmodulin; Provisional


Pssm-ID: 185504 [Multi-domain]  Cd Length: 149  Bit Score: 48.99  E-value: 1.30e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  992 FEDLLPVMAERLGGEGLIEELCKGFRLLMDGEKEVITFESLKRNSALLGlQDLRDDEIQSMVREGDLDGDGALNQMEFCV 1071
Cdd:PTZ00184    66 FPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLG-EKLTDEEVDEMIREADVDGDGQINYEEFVK 144


                   ....
gi 1750469449 1072 LMFR 1075
Cdd:PTZ00184   145 MMMS 148
PAN_1 pfam00024
PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some ...
 305-378 3.30e-04

PAN domain; The PAN domain contains a conserved core of three disulphide bridges. In some members of the family there is an additional fourth disulphide bridge the links the N and C termini of the domain. The domain is found in diverse proteins, in some they mediate protein-protein interactions, in others they mediate protein-carbohydrate interactions.


Pssm-ID: 459635  Cd Length: 76  Bit Score: 40.23  E-value: 3.30e-04
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1750469449  305 FIKIEGVKMPDLLQFWMNTSmTLKDCEEKCLKNCSCTAYAYSDATGEgngsCLMWYGDLIDIRRIAETGNRNFY 378
Cdd:pfam00024    3 FERVPGSSLSGVDVSTVTVS-SAEECAQRCTNEPRCRSFTYNPKSKK----CHLKSSSSGSLPRLKRSDNKVDY 71
PHA02732 PHA02732
hypothetical protein; Provisional
 559-667 4.72e-04

hypothetical protein; Provisional


Pssm-ID: 165099 [Multi-domain]  Cd Length: 1467  Bit Score: 44.36  E-value: 4.72e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  559 GNLVLFQGD----SKRVVAWqSFDYPTNTL-----LPDMKLGADRRTGLNWFltswksrdDPGTGEYSYKMDLSGFPEFF 629
Cdd:PHA02732   900 GGLLVLDGSaaaaPGQYIAW-RFMPSSNTLnvtihITSFPEGAQYNPGISIY--------SPNIGDQPSDNAISGFLAIL 970

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1750469449  630 LYKGSDPVWRTGP---WNGIRWSGVPEMNPN--FIFNVIYVDN 667
Cdd:PHA02732   971 VDFYDGNIWYHGPnanWQELRSSALPQPNPAypFTFSVIFTEN 1013
PAN_APPLE cd00129
PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth ...
 305-381 1.17e-03

PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins. Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.


Pssm-ID: 238074  Cd Length: 80  Bit Score: 38.83  E-value: 1.17e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1750469449  305 FIKIEGVKMPDLLQFWMNTSM-TLKDCEEKCLKN---CSCTAYAYSDATGEgngsCLMWYGDLIDIRRIAETGNRNFYIR 380
Cdd:cd00129      4 FCKSAGTTLIKIALKIKTTKAnTADECANRCEKNglpFSCKAFVFAKARKQ----CLWFPFNSMSGVRKEFSHGFDLYEN 79


                   .
gi 1750469449  381 V 381
Cdd:cd00129     80 K 80
EFh cd00051
EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal ...
 1016-1073 2.95e-03

EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.


Pssm-ID: 238008 [Multi-domain]  Cd Length: 63  Bit Score: 37.14  E-value: 2.95e-03
                           10        20        30        40        50        60
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1750469449 1016 FRLL---MDGekeVITFESLKRNSALLGLQDLrDDEIQSMVREGDLDGDGALNQMEFCVLM 1073
Cdd:cd00051      6 FRLFdkdGDG---TISADELKAALKSLGEGLS-EEEIDEMIREVDKDGDGKIDFEEFLELM 62
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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