|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
34-606 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 968.53 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 34 HIKTAIKSAFFISLISLSIFIDQGLEVIITNWEWMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYI 113
Cdd:MTH00137 39 HVKTAVKTAFFVSLLPLFLFLNQGAETIITNWNWMNTLTFDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNM 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 114 NQFFKYLLLFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLN 193
Cdd:MTH00137 119 NRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMAWMATNLN 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 194 SWDIQQLFFISSSKELTLPLLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTA 273
Cdd:MTH00137 199 SWEIQQIFALSKDFDLTLPLLGLILAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQTA 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 274 LTSCLLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNE 353
Cdd:MTH00137 279 LTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLNDE 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 354 QDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILTLLATSFTAAYSLRIIFFSLLN 433
Cdd:MTH00137 359 QDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMG 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 434 SPRYPSLLPLFESDITT-NPIKRLAWGSTIAGLMIILNLFPIKPQIYTMPTYMKMAAAIVTTMGLLISLELAMITFKQVN 512
Cdd:MTH00137 439 HPRFNPLSPINENNPAViNPIKRLAWGSIIAGLLITSNILPLKTPVMTMPPLLKLAALIVTILGLLIALELASLTNKQFK 518
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 513 LKPnFTTNFTFTTLLGFFPSIIHRIFPTINLKLGQNLATHLVDLSWSEKSGPMGLSKTQLAPLTFLTDTQQGLMKTYLTV 592
Cdd:MTH00137 519 PTP-TLPPHHFSNMLGFFPAIIHRLTPKLNLTLGQTIATQMVDQTWLEKTGPKGIASLQLPLITTTSNIQQGMIKTYLTL 597
|
570
....*....|....
gi 18001020 593 FFISTALFTVIFLM 606
Cdd:MTH00137 598 FLLTLALATLLLLL 611
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
32-604 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 877.70 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 32 HHHIKTAIKSAFFISLISLSIFIDQGLEVIITNWEWMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDP 111
Cdd:MTH00066 31 HTNVKTSVKTAFFISLIPLMIFINQGLESITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYMHSDP 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 112 YINQFFKYLLLFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSN 191
Cdd:MTH00066 111 KINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMN 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 192 LNSWDIQQLFfiSSSKELTLPLLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNS 271
Cdd:MTH00066 191 TNSWELQQIF--LLNDNSTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLENNQ 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 272 TALTSCLLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLN 351
Cdd:MTH00066 269 TALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIHSLN 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 352 NEQDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILTLLATSFTAAYSLRIIFFSL 431
Cdd:MTH00066 349 DEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSS 428
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 432 LNSPRYPSLLPLFESDIT-TNPIKRLAWGSTIAGLMIILNLFPIKPQIYTMPTYMKMAAAIVTTMGLLISLELAMITFKQ 510
Cdd:MTH00066 429 MKFPRSLPLSPINENNPLiINPIKRLAWGSIIAGLLIIFNILPMKPQILTMPTFMKLAALLVTLLGLLIALDLAKITSKT 508
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 511 VNLKPnfttNFTFTTLLGFFPSIIHRIFPTINLKLGQNLATHLVDLSWSEKSGPMGLSKTQLAPLTFLTDTQQGLMKTYL 590
Cdd:MTH00066 509 TPKTK----MHSFSNLLAFFPTIIHRLSPKTNLNSGQNIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYL 584
|
570
....*....|....
gi 18001020 591 TVFFISTALFTVIF 604
Cdd:MTH00066 585 TLFLITLLLMLILL 598
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
33-604 |
0e+00 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 869.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 33 HHIKTAIKSAFFISLISLSIFIDQGLEVIITNWEWMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPY 112
Cdd:MTH00004 34 TTIKTTVKLAFLISLIPLTLFLNSGTESITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASDPH 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 113 INQFFKYLLLFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNL 192
Cdd:MTH00004 114 ITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAMTL 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 193 NSWDIQQLFfiSSSKELTLPLLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNST 272
Cdd:MTH00004 194 NTWEIQQLF--SPTQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQT 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 273 ALTSCLLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNN 352
Cdd:MTH00004 272 ALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLNN 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 353 EQDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILTLLATSFTAAYSLRIIFFSLL 432
Cdd:MTH00004 352 EQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQT 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 433 NSPRYPSLLPLFESD-ITTNPIKRLAWGSTIAGLMIILNLFPIKPQIYTMPTYMKMAAAIVTTMGLLISLELAMITFKQV 511
Cdd:MTH00004 432 GFPRTPPTTPINENTpTIINPITRLALGSILAGLLISSTILPTKTPPMTMPTTTKLAALIVTILGILLALELSNMTTTLT 511
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 512 NLKPnfTTNFTFTTLLGFFPSIIHRIFPTINLKLGQNLATHLVDLSWSEKSGPMGLSKTQLAPLTFLTDTQQGLMKTYLT 591
Cdd:MTH00004 512 PPKQ--NTLHNFSNQLAFFNPLTHRLLPMTLLKSSQKIATHLIDLSWLEKMGPKGLANLQLTASKTLTTLQKGLIKNYLT 589
|
570
....*....|...
gi 18001020 592 VFFISTALFTVIF 604
Cdd:MTH00004 590 SFALTILLLLLLT 602
|
|
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
33-604 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 852.99 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 33 HHIKTAIKSAFFISLISLSIFIDQGLEVIITNWEWMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPY 112
Cdd:MTH00108 34 LYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSFKLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPN 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 113 INQFFKYLLLFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNL 192
Cdd:MTH00108 114 INRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAILYNRIGDIGFILAMAWFLLNL 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 193 NSWDIQQLFfISSSKELTLPLLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNST 272
Cdd:MTH00108 194 NSWDLQQIF-MLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENNKT 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 273 ALTSCLLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNN 352
Cdd:MTH00108 273 IQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPHLAFLHICTHAFFKAMLFMCSGSIIHNLND 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 353 EQDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILTLLATSFTAAYSLRIIFFSLL 432
Cdd:MTH00108 353 EQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANTSYTNAWALLITLIATSLTAAYSTRIIFFALL 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 433 NSPRYPSLLPLFESDIT-TNPIKRLAWGSTIAGLMIILNLFPIKPQIYTMPTYMKMAAAIVTTMGLLISLELAMITFkqv 511
Cdd:MTH00108 433 GQPRFPPLITINENNPLlINPIKRLLLGSIFAGFLISNNIPPTTIPQMTMPLYLKLTALAVTILGFILALELNLLTN--- 509
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 512 NLK-PNFTTNFTFTTLLGFFPSIIHRIFPTINLKLGQNLATHLVDLSWSEKSGPMGLSKTQLAPLTFLTdTQQGLMKTYL 590
Cdd:MTH00108 510 NLKfKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEKILPKTISLIQMKASTTIS-NQKGLIKLYF 588
|
570
....*....|....
gi 18001020 591 TVFFISTALFTVIF 604
Cdd:MTH00108 589 LSFLITLTLSLLLF 602
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
34-607 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 704.02 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 34 HIKTAIKSAFFISLISLSIFIDQGLEVIITNWEWMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYI 113
Cdd:MTH00211 30 HIKKAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSLWYMSSEPNI 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 114 NQFFKYLLLFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLN 193
Cdd:MTH00211 110 NRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWLLLNLN 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 194 SWDIQQLFFisSSKELTLPLLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTA 273
Cdd:MTH00211 190 SWEISQLFI--LNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSPLFQNNQLI 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 274 LTSCLLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNE 353
Cdd:MTH00211 268 LGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGSIIHGLNNE 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 354 QDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILTLLATSFTAAYSLRIIFFSLLN 433
Cdd:MTH00211 348 QDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFRLIFLSLGG 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 434 SPRYPSLLPLFE-SDITTNPIKRLAWGSTIAGLMIILNLFPIKPQIYTMPTYMKMAAAIVTTMGLLISLELAMITFKQVN 512
Cdd:MTH00211 428 YPRFLSLSPINEnYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILSLPFLLKLMPLLVTIVGLLLGLELVNLTHKQLK 507
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 513 LKPnfttnFTFTTLLGFFPSIIHRIFPTINLKLGQNLATHLVDLSWSEKSGPMGLSKTQLAPLTFLTDTQQGLMKTYLTV 592
Cdd:MTH00211 508 TST-----LSFSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSPQQGLIKSYLAL 582
|
570
....*....|....*
gi 18001020 593 FFISTALFTVIFLMN 607
Cdd:MTH00211 583 LLLSLLLILLLFLLF 597
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
40-605 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 559.20 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 40 KSAFFISLISLSIFIDQGLEVIITNW-EWMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQFFK 118
Cdd:MTH00208 63 KTLAFLSLINLLIWILLGCPNINISLsNWLSNTLFNFSLSFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFR 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 119 YLLLFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQ 198
Cdd:MTH00208 143 LLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLN 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 199 QLFFISSSKELTLPLLG--LILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTALTS 276
Cdd:MTH00208 223 EILSLNNSNSFLINILLfgILLAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSL 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 277 CLLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDI 356
Cdd:MTH00208 303 CLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDL 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 357 RKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILTLLATSFTAAYSLRIIFFSLLNSPR 436
Cdd:MTH00208 383 RKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPS 462
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 437 YPSLLPLFESDIT-TNPIKRLAWGSTIAGLMIILNLFPikPQIYTMPTYMKMAAAIVTTMGLLISLELAMITfkqvNLKP 515
Cdd:MTH00208 463 FSPLSPISEENPNlTNPLLRLAIGTIISGWFFSNFVFN--LPPLTLPLILKSLPLIVTIIGAAFSFSFLLSL----SSNP 536
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 516 NFTTNFTFTTLLGFFPSIIHRIFPTINLKLGQNLATHLVDLSWSEKSGPMGLSKTQLAPLTFLTDTQQGLMKTYLTVFFI 595
Cdd:MTH00208 537 INSNFFSFLSNQWFFVNISHSIIISFSFFTSLFGSTRTLDRGWSENIGPQGIGNTSSTLSKSYQLTQTGYIKQYLLSSTL 616
|
570
....*....|
gi 18001020 596 STALFTVIFL 605
Cdd:MTH00208 617 LFLLILTLSL 626
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
42-501 |
2.08e-128 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 390.28 E-value: 2.08e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 42 AFFISLISLSIFIDQglEVIITNWEWMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQFFKYLL 121
Cdd:COG1009 41 AFVLSLLLFPAVLGG--EVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 122 LFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQQLF 201
Cdd:COG1009 119 LFMAAMLGLVLSDNLLLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELL 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 202 FISSSKELTLPLLGLI----LAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTALTSC 277
Cdd:COG1009 199 AAAPTILSSPLLTLILllllLGAFGKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVV 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 278 LLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLnNEQDIR 357
Cdd:COG1009 279 AIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIR 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 358 KMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILTLLATSF-TAAYSLRIIFFSLLNSPR 436
Cdd:COG1009 358 KMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLGAFlTAFYSFRLFFLVFFGKPR 437
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 18001020 437 YPSLLPLFESDIT-TNPIKRLAWGSTIAGLMIILNLFP-IKPQIYTMPTYMKMAAAIVTTMGLLISL 501
Cdd:COG1009 438 PKTPKHPHESPWLmTLPLVVLAVLSLVLGLLLPGLLEGlLAPAAVLGGELHLAHGLLLNALPLLLSL 504
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
42-500 |
9.72e-124 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 378.73 E-value: 9.72e-124
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 42 AFFISLISLSIFIDQGLEVI-ITNWEWMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQFFKYL 120
Cdd:PRK06590 42 SALLSLVVFFDFLLGGGRAFsQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 121 LLFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQQL 200
Cdd:PRK06590 122 NLFTFSMLMLVLSDNLLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEV 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 201 FFISSSKELTLPLLGLILA------AAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTAL 274
Cdd:PRK06590 202 FAAAPQFFGLGWSALTLIClllfigAMGKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEAL 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 275 TSCLLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQ 354
Cdd:PRK06590 282 LFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQ 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 355 DIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIE-AMNTSHLNAWalILTLLATSFTAAYSLRIIFFSLLN 433
Cdd:PRK06590 362 DIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEaAFANGHINLF--VAGLVGAFLTAFYSFRLIFLVFHG 439
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 18001020 434 SPRYPSLLPlFESDIT-TNPIKRLAWGSTIAGLMIILNLFPIKPQI---------YTMPTYMKMAAAIVTTMGLLIS 500
Cdd:PRK06590 440 KEKEKIHHP-HESPAVmTLPLIVLAVLSVFAGALIVPPFLGVLPLTtelahgeaeHHLPVWVALLPLVVALAGIALA 515
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
42-500 |
3.20e-119 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 366.61 E-value: 3.20e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 42 AFFISLISLSIFIDQGLEVIITN--WEWMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQFFKY 119
Cdd:TIGR01974 40 SAALSAFVFVDFFLNGEGEAFTQslFPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAY 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 120 LLLFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQQ 199
Cdd:TIGR01974 120 LNLFTFSMLMLVLADNFLQLFFGWEGVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQE 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 200 LFFISSSKELTLPLLGLI---LAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTALTS 276
Cdd:TIGR01974 200 VFALAPGAFFSALTLICLllfIGAMGKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 277 CLLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDI 356
Cdd:TIGR01974 280 VTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDI 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 357 RKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILTLLATSFTAAYSLRIIFFSLLNSPR 436
Cdd:TIGR01974 360 RKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKER 439
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 18001020 437 YPSLLPLFESD-ITTNPIKRLAWGSTIAGLMIILNLFPIKPQIYT----------MPTYMKMAAAIVTTMGLLIS 500
Cdd:TIGR01974 440 HEADAHPHESPlVMLLPLIVLAVGSVFAGFFIVPLFEFLKGVLPTsaepalehhhVPALEIWSPTAVAILGILLA 514
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
43-605 |
2.01e-109 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 340.20 E-value: 2.01e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 43 FFISLISLSIFIDQGLE--VIITNWEWMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQFFKYL 120
Cdd:MTH00165 12 FFLSLILFFLGLYFLLNdySLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLV 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 121 LLFLLMMMILISANNLFQLFIGWEGVGIMSFLLIgWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFgSNLNSWD-IQQ 199
Cdd:MTH00165 92 LLFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSIAWM-MNFGSWNfIFY 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 200 LFFISSSKELTLPLLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNStaLTSCLL 279
Cdd:MTH00165 170 LDFMKNSFEMLLIGLLIMLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSF--FSKFLL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 280 LGAITTLFMA-TCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRK 358
Cdd:MTH00165 248 LISLLTMFMAgLGANFEFDLKKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRF 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 359 MGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILTLLATSFTAAYSLRIIFFSLLNSPRYP 438
Cdd:MTH00165 328 MGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLK 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 439 SLLPLFESDIT-TNPIKRLAWGSTIAGLMIILNLFPIKPQIYtMPTYMKMAAAIVTTMGLLISLELAMITFKQVNLKPNF 517
Cdd:MTH00165 408 SLNNLSDESKFmLKSMILLLFMSIFGGSMLSWLIFPEPYMIC-LPFYLKLLTLFVILLGGWLGYELSLMSLSYNLKSLKN 486
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 518 TTNFTFTTLLGFFPSIIHRIFPTINLKLGQNLaTHLVDLSWSEKSGPMGLSKTQLAPLTFLTDTQQGLMKTYLTVFFIST 597
Cdd:MTH00165 487 YKLSSFLGSMWFMPFLSTYGISYYPLNLGSLS-LKSFDQGWSEYFGGQGLYNFLKKLSKLIQWLQNNNLKIYLLSFLLWM 565
|
....*...
gi 18001020 598 ALFTVIFL 605
Cdd:MTH00165 566 IILLLLFL 573
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
43-600 |
5.92e-107 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 334.74 E-value: 5.92e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 43 FFISLISLSIFIDQGLEVIITN-------WEWMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQ 115
Cdd:MTH00020 33 SSCLIISLSWSFLIFYEILFNSsttyiklWRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPR 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 116 FFKYLLLFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSW 195
Cdd:MTH00020 113 FMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSL 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 196 DIQQLFFI---SSSKELTLPLLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNST 272
Cdd:MTH00020 193 DFSSVFNMvvsAPSSDITLICLFLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPL 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 273 ALTSCLLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNN 352
Cdd:MTH00020 273 ALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSD 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 353 EQDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILTLLATSFTAAYSLRIIFFSLL 432
Cdd:MTH00020 353 EQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFL 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 433 NSP--RYPSLLPLFESDIT-TNPIKRLAWGSTIAGLMIILNLFPIKPQIYTM-PTYMKMAAAIVTTMGLLISLELAMITF 508
Cdd:MTH00020 433 SNTnlKKAVFFHLHEGDWNlLLPLGILALGSIFVGYLAKEMIWSFQITLPPIvPLSIKLLPVFLSLGGIGLVIILYFYSS 512
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 509 KQVNLKPNFTTNFTFTTLLG--FFPSIIHRIFPTINLKLGQNLATHLVDLSWSEKSGPMGLSKTQLAPLTFLTDTQQGLM 586
Cdd:MTH00020 513 KTFRVPFSFIGRNSYTFLGSawQFNYILNYFLIKKIWKGGHLISYRTIDKGVLELVGPKGISNFLIILTQGLSSLQSGLV 592
|
570
....*....|....
gi 18001020 587 KTYLTVFFISTALF 600
Cdd:MTH00020 593 FNYALVILIGVAIF 606
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
43-609 |
6.27e-103 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 322.95 E-value: 6.27e-103
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 43 FFISLISLSIFIDQGLEVIITNWEWMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQFFKYLLL 122
Cdd:MTH00151 14 YSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMWLVML 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 123 FLLMMMILISANNLFQLFIGWEGVGIMSFLLIgWWYSRADANTAALQAVVYNRVGDIGLIMAMAwFGSNLNSWDIqqlFF 202
Cdd:MTH00151 94 FVLSMNLLIFIPSLPSLLLGWDGLGIVSFALV-IYYQNKKSLSAGMLTALTNRIGDVLILLSIA-LLVLLGHWSI---LS 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 203 ISSSKELTLPLLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTALTSCLLLGA 282
Cdd:MTH00151 169 MWDFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISL 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 283 ITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGL 362
Cdd:MTH00151 249 LTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSL 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 363 YLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILTLLATSFTAAYSLRIIFFSLLNSPRYPSLLP 442
Cdd:MTH00151 329 FLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSS 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 443 LFESDITTN-PIKRLAWGSTIAGLmIILNLFPIKPQIYTMPTYMKMAAAIVTTMGLLISLelamITFKQVNLKPNFTTNF 521
Cdd:MTH00151 409 KSDEDFYVSlPMLLLSLGALIGGK-LLQSLFEGFSEEFFLPSYLKLLIGFVILLGLFLSF----GFWDSGFSSSKMVKLS 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 522 TFTTLLGFFPSIIHRIFPTINLKLGQNLATHLvDLSWSEKSGPMGLSKTQlapLTFLTDTQQGLMKTYltVFFISTALFT 601
Cdd:MTH00151 484 FFFSSMWFLSPLSSQPLKSLSLKLSNSSMKSL-DMGWLEILGGQGVFKAN---KSFSVLNESWPVKWF--NFFIGLILLL 557
|
....*...
gi 18001020 602 VIFLMNWS 609
Cdd:MTH00151 558 VLFLVVIS 565
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
41-606 |
4.94e-100 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 316.95 E-value: 4.94e-100
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 41 SAFFIS-LISLSIFIDQGLE---VIITNWEWMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQF 116
Cdd:MTH00210 34 SCIVISaIVSCCIFYETTLNgsaTYIKLWRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRF 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 117 FKYLLLFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAM----AWFGSnL 192
Cdd:MTH00210 114 MSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMimilKEFGT-L 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 193 NSWDIQQLFFISSSKELTLPL-LGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNS 271
Cdd:MTH00210 193 EFSTISSLLVTNINKESLTIIcLLLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSP 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 272 TALTSCLLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLN 351
Cdd:MTH00210 273 LALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVS 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 352 NEQDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILTLLATSFTAAYSLRIIFFSL 431
Cdd:MTH00210 353 DEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTF 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 432 LNSPRYP--SLLPLFESDIT-TNPIKRLAWGSTIAGL----MIILNLFPikPQIytmPTYMKMAAAIVTTMGLLISLELA 504
Cdd:MTH00210 433 ITNTNSKkeVFIGVHESSWNiTFPLLLLAFGSIFVGYlgkeVVLSNVIP--PIV---PNSIKMIPLLFSLLGALLAFVIY 507
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 505 MITFKQVNLKPNFTTNFTFTTLLGFFPS------IIHRIFPTINLKLGQNLATHLVDLSWSEKSGPMGLSKTQLAPLTFL 578
Cdd:MTH00210 508 NSMVFLIKISRRGVSIRLYHVIYTFLNSawqfnyVINHFIVKNIWKFGHLITYRIIDRGLLEIIGPRGISKVLIKLTQKI 587
|
570 580
....*....|....*....|....*...
gi 18001020 579 TDTQQGLMKTYLTVFFISTALFTVIFLM 606
Cdd:MTH00210 588 SNLQSGMVFNYALIMIIFTTLFISGAGI 615
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
43-606 |
4.72e-98 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 310.42 E-value: 4.72e-98
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 43 FFISLISLSIFIDQglEVIITNWEWMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQFFKYLLL 122
Cdd:MTH00209 14 LFSFLMFVIFMWFQ--KIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 123 FLLMMMILISANNLFQLFIGWEGVGIMSFLLIgWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFgSNLNSWDIqqlFF 202
Cdd:MTH00209 92 FILSMNFLIFVPNLITLLLGWDGLGLVSYLLV-IYYQNSKSLSAGMLTALTNRVGDALLILSIAWM-LMHGNWNI---FY 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 203 ISSSKELTLPLLGLIL-AAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTALTSCLLLG 281
Cdd:MTH00209 167 LNFNSNLGSVISVLIVlAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLG 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 282 AITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGG 361
Cdd:MTH00209 247 SLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGN 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 362 LYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILTLLATSFTAAYSLRIIFFSLLNSPRYPSL- 440
Cdd:MTH00209 327 LWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLn 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 441 LPLFESDITTNPIKRLAWGSTIAGlMIILNLFPIKPQIYTMPTYMKMAAAIVTTMGLLISLELAMITFKQVNLKPNFTTN 520
Cdd:MTH00209 407 SSFDQNKLNLKPMLVLTLGSITGG-SVMSWVMVPSVNSVVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIKGYKVNYFL 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 521 FTfttlLGFFPSIIHRIFPTINLKLGQNLaTHLVDLSWSEKSGPMGLSKTQLAPLTFLTDTQQGLMKTYLTVFFIStaLF 600
Cdd:MTH00209 486 SQ----MWFLPDLSSQPVNKFTMKLSKTM-LKLLDQGWVEKMSGQGSFKVLKKSSKLSQIIQNNSLKLFVTFMMLI--LL 558
|
....*.
gi 18001020 601 TVIFLM 606
Cdd:MTH00209 559 GVILFM 564
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
43-607 |
7.65e-95 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 302.07 E-value: 7.65e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 43 FFISLISLSIFIDQGLEVIITNWEWMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQFFKYLLL 122
Cdd:MTH00207 17 MSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDKFLSRFISLVLL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 123 FLLMMMILISANNLFQLFIGWEGVGIMSFLLIgWWYSRADANTAALQAVVYNRVGDIGLIMAMAWfGSNLNSWDIQQLFF 202
Cdd:MTH00207 97 FVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSIGW-TLNQGHWSITNMWQ 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 203 issSKELTLPLLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSnNSTALTSCLLLGA 282
Cdd:MTH00207 175 ---TDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLS-STYWFNPALLLTA 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 283 ITTLFMA-TCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGG 361
Cdd:MTH00207 251 SLTMLMAgLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGN 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 362 LYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILTLLATSFTAAYSLRIIFFSLLNSPRYPSLL 441
Cdd:MTH00207 331 LTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYH 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 442 PLFESDIT-TNPIKRLAWGSTIAGLMIILNLFPIKpQIYTMPTYMKMAAAIVTTMGLLISLELAMITFKQVNLKPNFTTN 520
Cdd:MTH00207 411 HLEDEDKSlTTPMLLLTLGAITSGSALNWWLPTPQ-EEPILPLQYKLLPLLVVTLGALLAWLFTTPNITKTPLLINNPLS 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 521 FTFTTLLGFFPSIIHRIFPTINLKLGQNLaTHLVDLSWSEKSGPMGLSKTQLAPLTFLTDTQQGLMKTYLtvfFISTALF 600
Cdd:MTH00207 490 HFASCLMWFLVPLSSQFIMSTPMNLSHNY-LKLLDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNIPNNYL---MMSFVLL 565
|
....*..
gi 18001020 601 TVIFLMN 607
Cdd:MTH00207 566 TIIIIMT 572
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
39-428 |
7.50e-82 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 270.74 E-value: 7.50e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 39 IKSAFFISL------ISLSIFIDQ--GLEVIITNWEWMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSD 110
Cdd:PRK07376 39 PVAVLLISLvgaaavLSYALLWSQiqGHEPYERLFEWASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHD 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 111 PYINQFFKYLLLFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGS 190
Cdd:PRK07376 119 PGYVRFFAYLSLFSSSMLGLVISPNLVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFW 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 191 NLNSWDIQQlffISSSKELTLPLLGLILAAA------------GKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIF 258
Cdd:PRK07376 199 ATGSFDFDG---IADRLSELVSSGAVSGWLAlllcilvflgpmAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVF 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 259 LLIRLHPLLSNNSTALTSCLLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAM 338
Cdd:PRK07376 276 LVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAM 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 339 LFLCSGSIIHNLNN--------EQDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWalI 410
Cdd:PRK07376 356 LFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALW--F 433
|
410
....*....|....*...
gi 18001020 411 LTLLATSFTAAYSLRIIF 428
Cdd:PRK07376 434 VGFLTAGMTAFYMFRMYF 451
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
60-609 |
4.17e-81 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 268.75 E-value: 4.17e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 60 VIITNWEWMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQFFKYLLLFLLMMMILISANNLFQL 139
Cdd:MTH00032 57 VHIELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQL 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 140 FIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQQL---FFISSSKELTLPLLGL 216
Cdd:MTH00032 137 FIGWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLTFnggSVGSGIMDRGYYGGGA 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 217 ILA---------------AAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTALTSCLLLG 281
Cdd:MTH00032 217 YESplapfaiigillligCIGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFG 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 282 AITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPH-LAFLHICTHAFFKAMLFLCSGSIIHNLN-NEQDIRKM 359
Cdd:MTH00032 297 ALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHnVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKM 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 360 GGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIE------------------------------------AMNTSH 403
Cdd:MTH00032 377 GGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEltysgrnmgipfgssllkiqgdigikkddrgsiggpEGYPSR 456
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 404 LNAWALILTLLATSFTAAYSLRIIFFSLLNSPRYP------SLLPLFESDITTnPIKRLAWGSTIAGLMIILNLF----- 472
Cdd:MTH00032 457 GSAFAFWLGTVAALLTAFYSIRLVYITFIISPNSPkeslisSHINIVDKRVLT-VLSLLCFGAIFVGYLIQDILIgdieh 535
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 473 PIKPQ-IYTMPTYMKmaaaiVTTMGLLIsLELAMITFKQVNLKPNFTTNFTFTTLLGF------FPSIIHRIFPTINLKL 545
Cdd:MTH00032 536 PIVPPlIKVMPTLMG-----LFGMGLCL-WAQKGTREGELYWGFDPIGPSFLLSIYSFlggawqGDHLINKLVAIPLFSF 609
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 18001020 546 GQNLATHLVDLSWSEKSGPMGLSKTQLAPLTFLTDTQQGLMKTYLTVFFIstalFTVIFLMNWS 609
Cdd:MTH00032 610 GHWGIYKTLDRGWLELFGPQGISTIALRVSQFISNLQSGVISRYALVLLS----FTIIFLALWG 669
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
38-428 |
5.75e-63 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 221.30 E-value: 5.75e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 38 AIKSAFFIS---LISLSIFIDQglevIITN------WEWMNINSFSIMISFKFD-FFSIMFL---SVALFVtwsiLEFAE 104
Cdd:CHL00025 41 AFPSILLLSivmIFSLNLSIQQ----INGSsiyqylWSWTINNDFSLEFGYLIDpLTSIMLIlitTVGILV----LIYSD 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 105 WYMHSDPYINQFFKYLLLFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGL--- 181
Cdd:CHL00025 113 NYMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLllg 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 182 IMAMAWFgsnLNSWDIQQLFFI---------SSSKELTLPLLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTM 252
Cdd:CHL00025 193 ILGFYWI---TGSFEFRDLFEIfnnliynneVNLLFATLCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATM 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 253 VVAGIFLLIRLHPLLSNNSTALTSCLLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTH 332
Cdd:CHL00025 270 VAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITH 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 333 AFFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEamntshl 404
Cdd:CHL00025 350 AYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILN------- 422
|
410 420
....*....|....*....|....*....
gi 18001020 405 NAW--ALILTLLATS---FTAAYSLRIIF 428
Cdd:CHL00025 423 DSWlySPIFAIIAWStagLTAFYMFRIYL 451
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
59-415 |
1.07e-54 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 198.60 E-value: 1.07e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 59 EVIITNWEWmnINSFSIMISFKFDFFSIMFlsvALFVT---WSILEFAEWYMHSDPYINQFFKYLLLFLLMMMILISANN 135
Cdd:PRK12647 42 ETVRGGYAW--VPSLGVNLSFLLDGLSLTF---ALLITgigTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDN 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 136 LFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQQLF----FISSSKELTL 211
Cdd:PRK12647 117 LITLFVFWELTSITSFLLIGFNHEREAARRAALQALLVTGGGGLALLAGLILLGNVTGTYSLSELLasgdVIREHPLYLA 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 212 PLLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTALTSCLLLGAITTLFMATC 291
Cdd:PRK12647 197 ILLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALL 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 292 ALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHL---AFLHICTHAFFKAMLFLCSGSIIHNLNNeQDIRKMGGLYLTLPT 368
Cdd:PRK12647 277 AVRQTDLKLILAYSTVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVAGIIDHETGT-RDITKLGGLRRAMPI 355
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 18001020 369 TTSCLIIGSLALTGMPFLSGFFSKDAIIEAmnTSHLNAWALILTLLA 415
Cdd:PRK12647 356 TAAAALLAALSMAGLPPLFGFLAKELIYEA--LLEAPLWSLILTVAA 400
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
44-436 |
1.28e-52 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 194.25 E-value: 1.28e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 44 FISLISLSIFIDQGlEVIITNWEWMNinSFSIMISFKFD----FFSIMFLSVALFVtwsILeFAEWYMHSDPYINQFFKY 119
Cdd:PRK12648 40 LVLLALLYPAVAAG-EVIRAEIEWLP--ALGLNLSLRLDglawLFALLILGIGLLV---VL-YARYYLSPADPVPRFFSF 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 120 LLLFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQQ 199
Cdd:PRK12648 113 LLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGYWHHRADARRGARMALTVTGAGGLALLAGVLLLGHIVGSYDLDV 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 200 LF----FISSSKELTLPLLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTALT 275
Cdd:PRK12648 193 VLaagdLIRAHPLYPPALVLILLGAFTKSAQFPFHFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFW 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 276 SCLLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPhLAFL----HICTHAFFKAMLFLCSGSIIHnln 351
Cdd:PRK12648 273 IVGGAGLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLGLGSP-LAAVaaifHIINHATFKASLFMAAGIIDH--- 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 352 nE---QDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAII-EAMNTSHLNAWALILTLLAT---SFTAAYSL 424
Cdd:PRK12648 349 -EtgtRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSKEMFFaETLDTHLLGSLDWLLPVAATlagAFSVAYSL 427
|
410
....*....|..
gi 18001020 425 RIIFFSLLNSPR 436
Cdd:PRK12648 428 RFIHDVFFGPPP 439
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
133-415 |
2.67e-52 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 181.36 E-value: 2.67e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 133 ANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQQLF----FISSSKE 208
Cdd:pfam00361 1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSkaltGGLNSSG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 209 LTLPLLGLILAAAGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRLHPLLSNNSTALTSCLLLGAITTLF 287
Cdd:pfam00361 81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLPSSPFIQQILLILAIISML 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 288 MAT-CALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPH---LAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLY 363
Cdd:pfam00361 160 LGSlAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 18001020 364 LTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILTLLA 415
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVVGS 291
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
67-438 |
1.60e-49 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 184.19 E-value: 1.60e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 67 WMNinSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYM-HSDPYINQFFKYLLLFLLMMMILISANNLFQLFIGWEG 145
Cdd:PRK12646 64 WMK--TLDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLsSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWEL 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 146 VGIMSFLLIGWWYSRADANTAALQAVVYNRVGD----IGLIMAMAWFGSNLNSWDIQQLFFISSSKELTLPLLGLILAAA 221
Cdd:PRK12646 142 TSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGlallVGFIMLYIMTGTNNITEILGQADHIKNHGLFIPMIFMFLLGAF 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 222 GKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTALTSCLLLGAITTLFMATCALTQNDIKKI 301
Cdd:PRK12646 222 TKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALKQWDLKGI 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 302 VAFSTSSQLGLMMVTIGLN-----QPHLAF------------LHICTHAFFKAMLFLCSGSIIHNlNNEQDIRKMGGLYL 364
Cdd:PRK12646 302 LAYSTISQLGMIMAMVGIGggyaqHQQDAIasiyvfvlfaalFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQ 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 365 TLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAM-NTSHLNAWALILT-------LLATSFTAAYSLRII---FFSLLN 433
Cdd:PRK12646 381 LFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDALtQTGQLSQFSLISMiiivfigVIASIFTFTYALYMVkevFWGKYD 460
|
....*
gi 18001020 434 SPRYP 438
Cdd:PRK12646 461 SKVFT 465
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
45-436 |
4.06e-48 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 181.01 E-value: 4.06e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 45 ISLISLSIFIDQGLEVIIT----NWE--WMN---INSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQ 115
Cdd:PRK12650 32 AIFVAAAGLLLKELPPILDgdalTWSvtWIPdllGNGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTS 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 116 FFKYLLLFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGwwYSRADANTAALQAVVYNRVGDIGLIMAMAWF----GSN 191
Cdd:PRK12650 112 FYLLMTAFMAAMLLLVLADDVVVLFVAWELVSLASFFLIA--RSGSGGEAGSIRTLILTFFGGLTLLAAVAIAatqtGTT 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 192 LNSWDIQQLFFISSSKELTLPLLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNS 271
Cdd:PRK12650 190 SLSGILHSDVWAEKPGLTTVVAVLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVA 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 272 TALTSCLLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPH---LAFLHICTHAFFKAMLFLCSGSIIH 348
Cdd:PRK12650 270 VWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDH 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 349 NLNNeQDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILTLLATS----FTAAYSL 424
Cdd:PRK12650 350 QAGT-RDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAAlgavFTFAYSA 428
|
410
....*....|..
gi 18001020 425 RIIFFSLLNSPR 436
Cdd:PRK12650 429 RLVLGAFVDGPR 440
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
72-473 |
1.01e-47 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 178.89 E-value: 1.01e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 72 SFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQFFKYLLLFLLMMMILISANNLFQLFIGWEGVGIMSF 151
Cdd:TIGR00940 64 ELGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELTSIVSF 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 152 LLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQQLF----FISSSKELTLPLLGLILAAAGKSAQF 227
Cdd:TIGR00940 144 LLISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIasadAIRNSPLFGTAMVLVLLGAFTKSAQF 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 228 GLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTALTSCLLLGAITTLFMATCALTQNDIKKIVAFSTS 307
Cdd:TIGR00940 224 PFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGILAFSTI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 308 SQLGLMMVTIGLNQPHL----------------AFLHICTHAFFKAMLFLCSGSIIHNlNNEQDIRKMGGLYLTLPTTTS 371
Cdd:TIGR00940 304 SQLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIMPITFT 382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 372 CLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHL------NAWAL---ILTLLATSFTAAYSLRIIFFSLLNSPRyPSLLP 442
Cdd:TIGR00940 383 LAMIASAAMAGVPPFNGFLSKEMFFAEAITAHLvnpfdtVTLGYlfpYVATVASVFTFVYSLRFIHGVFFGRPK-PEDLP 461
|
410 420 430
....*....|....*....|....*....|.
gi 18001020 443 LFESDIttnPIKRLAWGSTIAGLMIILNLFP 473
Cdd:TIGR00940 462 RKPHEP---PRWMLASPDILVLLVLVFGLFP 489
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
43-433 |
4.52e-47 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 173.18 E-value: 4.52e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 43 FFISLISLSIFIDQGLEVIITNWEWMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQFFKYLLL 122
Cdd:MTH00095 5 IFLILFFFFFLLLFILFLPFMKLNLFFLEWDFLSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 123 FLLMMMILISANNLFQLFIGWEGVGIMSFLLIgWWYSRADANTAALQAVVYNRVGDIGLIMAmawfgsnLNSWDIQQLFF 202
Cdd:MTH00095 85 FVGSMFMLNFSNSVFTMLLSWDLLGISSFFLV-LFYNNWDSNSGAMNTALTNRIGDFFIFLF-------FSGFIFSSYYF 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 203 ISSSKELTLPLLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHpLLSNNSTALTSCLLLGA 282
Cdd:MTH00095 157 FSFSFFSSSMILMLLLTSFTKSAQFPFSSWLPKAMSAPTPVSSLVHSSTLVTAGLILLMNFS-YLILNMNVMKIMLLIGL 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 283 ITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGL 362
Cdd:MTH00095 236 FTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNN 315
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 18001020 363 YLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILTLLATSFTAAYSLRIIFFSLLN 433
Cdd:MTH00095 316 GNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLS 386
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
42-428 |
7.38e-47 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 174.33 E-value: 7.38e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 42 AFFISLISLSIFIDQGLEVIitNWEWMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQFFKYLL 121
Cdd:PRK07390 50 AFVHSLLALRAIWNQPPQQL--SFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLG 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 122 LFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQQLF 201
Cdd:PRK07390 128 FFEAAMSGLALSDSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLA 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 202 FISSSKELTLPLLGLILAA-----AGKSAQFGLHPWLPSAMEGPTPVSaLLHSSTMVVAGIFLLIRLHPLLSNNSTALTS 276
Cdd:PRK07390 208 AWAATANLDPLTATLLGLAliagpTGKCAQFPLHLWLDEAMEGPNPAS-ILRNSVVVATGAWVLIKLQPVLALSPVALTV 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 277 CLLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNlNNEQDI 356
Cdd:PRK07390 287 LIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT-TITQDL 365
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 18001020 357 RKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFskdAIIEAMNTSHLNAWALILTLLATSFTAAYSLRIIF 428
Cdd:PRK07390 366 TELGGLWSRMPATTLAFLVGSAGLVALLPLGGFW---ALLRLADGLWAVSPWLVGVLLLVNALTAFNLTRVF 434
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
77-427 |
9.12e-47 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 170.33 E-value: 9.12e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 77 ISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQFFKYLLLFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGw 156
Cdd:COG0651 70 IVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLVA- 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 157 WYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQQLFFISSSKELTLPLLGLILAAAG---KSAQFGLHPWL 233
Cdd:COG0651 149 LGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFALLLVGfgiKAALFPLHFWL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 234 PSAM-EGPTPVSALLhSSTMVVAGIFLLIRLHPLLSNNSTALTS---CLLLGAITTLFMATCALTQNDIKKIVAFSTSSQ 309
Cdd:COG0651 229 PDAYpAAPSPVSALL-SGLLTKVGVYAILRVLTLLFGADPALFLgtlLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQ 307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 310 LGLMMVTIGLNQPHL---AFLHICTHAFFKAMLFLCSGSIIHNLnNEQDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFL 386
Cdd:COG0651 308 IGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERAT-GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPL 386
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 18001020 387 SGFFSKDAIIEAMnTSHLNAWALILTLLATSFTAAYSLRII 427
Cdd:COG0651 387 SGFVSKWLLLQAA-LEAGAWLLAAVLLLSSLLTLAYFVRIF 426
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
65-428 |
5.05e-46 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 174.73 E-value: 5.05e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 65 WEWmnINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSD-PYINQFFKYLLLFLLMMMILISANNLFQLFIGW 143
Cdd:PRK12644 58 VPW--IPSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDePRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFW 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 144 EGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQQLF-FISSSKELTLPLLGLILAAAG 222
Cdd:PRK12644 136 ELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLaDPPTGPAVSVAVVLILVGALS 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 223 KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTALTSCLLLGAITTLFMATCALTQNDIKKIV 302
Cdd:PRK12644 216 KSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLIL 295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 303 AFSTSSQLGLMMVTIGLNQPH--LAFLH-ICTHAFFKAMLFLCSGSIIHNlNNEQDIRKMGGLYLTLPTTtscLIIGSLA 379
Cdd:PRK12644 296 AYGTVSQLGFLTVLVGIGTRDaaLAGLAmLLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVL---AVVAALA 371
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 18001020 380 LTGM---PFLSGFFSKDAIIEAMNTSH----LNAWALILTLLATSFTAAYSLRIIF 428
Cdd:PRK12644 372 AASMaglPPLLGFVAKEAALEAVLHDGalgpAGPVVLAGIVLGSILTVAYSLRFLW 427
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
66-476 |
3.03e-43 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 165.77 E-value: 3.03e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 66 EWMNinSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQFFKYLLLFLLMMMILISANNLFQLFIGWEG 145
Cdd:PRK12649 65 SWLP--SAGVEFSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWEL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 146 VGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDI-------QQLFFISSSKELTLPLLGLIL 218
Cdd:PRK12649 143 TSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAGFLLLHVITGTYDIatilqdsELIENIKGHPLFLITLILIFI 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 219 AAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTALTSCLLLGAITTLFMATCALTQNDI 298
Cdd:PRK12649 223 GAAAKSAQGPFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDI 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 299 KKIVAFSTSSQLGLMMVTIGLNQPH-------LAFLHICTHAFFKAMLFLCSGSIIHNLNNeQDIRKMGGLYLTLPTTTS 371
Cdd:PRK12649 303 KAILAYSTISQLAYLMTMYGYTTYHepglgvaAATFHLLNHATFKACLFLVAGIVAHEAAT-RDIRKLGGLRKEMPITFI 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 372 CLIIGSLALTGMPFLSGFFSKDAIIEA---MNTSHLNAWALILTLLATS---FTAAYSLRIIFFSLLNSpRYPSLLPlfe 445
Cdd:PRK12649 382 VASIAALAMAGIPPLNGFLSKEMFYETsveMGALIGGPFTIIIPAVAVLggvFTFAYSIKLIDGIFLGE-RTHDHLP--- 457
|
410 420 430
....*....|....*....|....*....|.
gi 18001020 446 SDITTNPIKRLAWGSTIAGLMIILNLFPIKP 476
Cdd:PRK12649 458 HHIHEAPYVMLIPAAFLAGLVILFGLVPSIP 488
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
422-604 |
1.30e-42 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 151.16 E-value: 1.30e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 422 YSLRIIFFSLLNSPRYPSLLPLFESD-ITTNPIKRLAWGSTIAGLMIILNLFPiKPQIYTMPTYMKMAAAIVTTMGLLIS 500
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNpIMINPIKRLAIGSIIGGSLLSWLIFP-KPPMMTMPLYLKLLALLVTILGLLLG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 501 LELAMITFKQVNlKPNFTTNFTFTTLLGFFPSIIHRIFPTINLKLGQNLATHLvDLSWSEKSGPMGLSKTQLAPLTFLTD 580
Cdd:pfam06455 80 LELSNLSNKQLK-KSLNFNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLAKQI-DQGWSEKFGPQGIAKTLMTLSKIIQN 157
|
170 180
....*....|....*....|....
gi 18001020 581 TQQGLMKTYLTVFFISTALFTVIF 604
Cdd:pfam06455 158 SQKGLIKIYLLSFLLWLLLLLLLI 181
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
134-473 |
4.68e-42 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 162.40 E-value: 4.68e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 134 NNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQQLF----FISSSKEL 209
Cdd:PRK12645 130 DNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLSMLGGFILLYIMTGSFSIREMIanadEIQNSPLF 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 210 TLPLLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTALTSCLLLGAITTLFMA 289
Cdd:PRK12645 210 IPAMILILLGAFTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVWFWTVTLVGLITLFWGS 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 290 TCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHL----------------AFLHICTHAFFKAMLFLCSGSIIHNLNNe 353
Cdd:PRK12645 290 LNAVKQTDLKGILAFSTVSQLGLIMSLLGIGAASLhyqgddskiyaaaitaAIFHLINHATFKGSLFMIVGIVDHETGT- 368
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 354 QDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAM-NTSHLNAWAL--------ILTLLATSFTAAYSL 424
Cdd:PRK12645 369 RDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESMlNATEANLFSLdtwgvlfpVIAWVASVFTFVYSI 448
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 18001020 425 RIIFFSLLNSPRyPSLLPlfeSDITTNPIKRLAWGSTIAGLMIILNLFP 473
Cdd:PRK12645 449 IFIFKTFFGKYK-PEQLP---KKAHEAPIGMLISPIILASLVVVFGLFP 493
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
135-424 |
1.39e-37 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 145.50 E-value: 1.39e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 135 NLFQLFIGWEGVGIMSFLLIGWwYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQQLFFISSSkELTLPLL 214
Cdd:PRK06525 134 TLLGLLLFFEITGLCSWALISY-YQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGS-LKYLVFL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 215 GLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLhpLLSNNSTALTSCLLLGAITTLFMATCALT 294
Cdd:PRK06525 212 GILFAAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARA--IQSMGPIPHVIGYVGAVMAIVTLLYGFLM 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 295 ---QNDIKKIVAFSTSSQLGLMMVTIGLN--QPHLAF----LHICTHAFFKAMLFLCSGSIIHNLNNeQDIRKMGGLYLT 365
Cdd:PRK06525 290 ylpQQDMKRLLAYSTITQLGYMFFGLSLAilGSRLALegsiAYIFNHAFAKSLFFLVAGALSYSCGT-RLLPRLRGVLKK 368
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 18001020 366 LPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILTLLATSFTAAYSL 424
Cdd:PRK06525 369 LPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIESVASF 427
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
77-427 |
2.46e-31 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 127.69 E-value: 2.46e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 77 ISFKFDFFSIMFLSVALFVTWsileFAEWYMHSDPYINQFFKYLLLFLLMMMIL--ISANNLFQLFIGWEGVGIMSFLLI 154
Cdd:PRK08375 71 IELRADSLSALFLLVTSILAI----AALLYAIGYGEHRQTRFYALFLLLLAGLLgaLLTADLFNLFVFLEIMSLSSYALV 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 155 GWWYSRAdANTAALQAVVYNRVGD------IGLIMAMAwfGSnLNSWDIQQLFfiSSSKELTLPLLGLILAAAGKSAQFG 228
Cdd:PRK08375 147 AMGGDRR-ALAAARKYLIVGLIGStflligVGLLYGVT--GT-LNMADLAGAL--AENPTVVTAFGFVLLALALKAAVFP 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 229 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRL-----HPLLSNNSTALTSCLLLGAITTLFMATCALTQNDIKKIVA 303
Cdd:PRK08375 221 LHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIyftvfGGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLA 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 304 FSTSSQLGLMMVTIGLNQPHL---AFLHICTHAFFKAMLFLCSGSIIHNLNNeQDIRKMGGLYLTLPTTTSCLIIGSLAL 380
Cdd:PRK08375 301 YSTVSQMGYILLGLALLTPLAlaaGLLHLLHHALMKGALFLAAGAIEVTYGT-RRLSELSGLGRRMPLTAAAFAVASLSL 379
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 18001020 381 TGMPFLSGFFSKDAIIEAMNtsHLNAWALILTLLATSF-TAAYSLRII 427
Cdd:PRK08375 380 IGVPPTSGFVSKWYLVVGAV--EAGQWLVLAVLLASSLlALLYFLRIW 425
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
136-437 |
3.25e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 124.70 E-value: 3.25e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 136 LFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGD----IGLIMAMAWFGSnLNSWD----IQQLFFISSSK 207
Cdd:PRK12667 135 AFNLFVMLEVLSISAYGLVAYYRDRGDAVEAAIKYALIGAVGTtlyfLALAFLYATFGT-LNMADlsakIRGLSFPLTGG 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 208 ELTLPLLGLILAAA-------GKSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIR--------LHPLLSNNS 271
Cdd:PRK12667 214 LAGNPPLALGVALAlalwaftIKAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRflytifgiSPSLIDFRA 292
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 272 TALTSCLLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQP---HLAFLHICTHAFFKAMLFLCSGSIIH 348
Cdd:PRK12667 293 ALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQlglAAALFHIINHAIAKSLLFLASGVFIH 372
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 349 NLNNeQDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILtLLATSFTAAYSLRIIF 428
Cdd:PRK12667 373 AAGT-RDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALVL-LIASAISLVGYFRAWY 450
|
....*....
gi 18001020 429 FSLLNSPRY 437
Cdd:PRK12667 451 SLFFGKPKS 459
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
97-347 |
1.57e-27 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 116.72 E-value: 1.57e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 97 WSILEFAEWYMHSDPYINQFFKYLLLFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRV 176
Cdd:PRK08168 83 WVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADRL 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 177 GDIGLIMAMAWFGSNLNSWDIQQLFF----ISSSKELTLPLLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTM 252
Cdd:PRK08168 163 AELLLLAAAALAYLEVGSLSLSALWAhlaaQGASPSLQAAALLLVLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGVV 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 253 VVAGiFLLIRLHPLLSNNSTALTSCLLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTH 332
Cdd:PRK08168 243 NLGG-FVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLVAH 321
|
250
....*....|....*
gi 18001020 333 AFFKAMLFLCSGSII 347
Cdd:PRK08168 322 SLYKAHAFLSASEAV 336
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
133-428 |
3.95e-25 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 108.89 E-value: 3.95e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 133 ANNLFQLFIGWEGVGIMSFLLIGwwYSRAD-ANTAALQAVVYNRVGdigliMAMAWFGSNLNSWDIQQLFFISSSKELTL 211
Cdd:PRK07234 113 CADLISLYVALEVLSIATFLLVA--YPRTDrAIWVGLRYLFYSNVA-----MLFYLIGAVLVYQANGTFAFSGLATADPE 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 212 PLLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTALTsclLLGAITTLFMATC 291
Cdd:PRK07234 186 AFALIALGLLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVR---IFGVGTALLGVLF 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 292 ALTQNDIKKIVAFSTSSQLGLMMVT--IGlnqphlAFLHIcTHAFFKAMLFLCSGsIIHNLNNEQDIRKMGGLYLTLPtt 369
Cdd:PRK07234 263 ALLEKDLKRMLAFSTISQLGFILAAplVG------GLYAL-AHGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIP-- 332
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*....
gi 18001020 370 tscLIIGSLALTGMPFLSGFFSKdaiieAMNTSHLNAWALILTLLATSFTAAYSLRIIF 428
Cdd:PRK07234 333 ---LTMASFSIAGFPLLAGFVSK-----VLTLKNLLPWQAIALNLAAVGTAASFWKFIF 383
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
65-435 |
7.56e-24 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 105.28 E-value: 7.56e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 65 WEWMNINSFSImiSFKFDFFSIMFLSVALFVTWSILEFAEWYMHSD--PYINQFFKYLLLFLLMMMILISANNLFQLFIG 142
Cdd:PRK06589 67 FELMDFGNYSI--GLHLEPLGLIFLLLIGFLWICALLYTPKYLAINniDSSSRFLFFFNLTILIGVLIALSSDLFTMFVC 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 143 WEGVGIMSFLLIGwwYSRADANTAALQavvynRVGDIGLIMAMAWF--GSNLNSWDIQQLFFISS---SKELTLPLLGLI 217
Cdd:PRK06589 145 YELLTISTAFLIG--HTRNNISLSGGY-----KYLKILMISALLLFlpAVILIYTKTGNLDFVSGglfSKNQSIILLLMF 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 218 LAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPL---LSNNST--ALTSCLLLGAITTLFMATC- 291
Cdd:PRK06589 218 IYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYifgLSYLQRifAEFNWLIFIPIVSIFYSSLk 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 292 ALTQNDIKKIVAFSTSSQLGLMMVTIGLNQP---HLAFLHICTHAFFKAMLFLCSGSIIhNLNNEQDIRKMGGLYLTLPT 368
Cdd:PRK06589 298 ALKTDNIKKILAYSTISQLSLALLSAFILTPkalGAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPL 376
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 369 TTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILTLL---ATSFTAAYSLRIIFFSLLNSP 435
Cdd:PRK06589 377 ISFIISISSLSLIGIPIFSGFISKFLILLAASEQNQPWLSIIVMLVviaSSILSALYLLKILSSIYKPSL 446
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
133-425 |
2.97e-23 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 103.24 E-value: 2.97e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 133 ANNLFQLFIGWEGVGIMSFLLIGWWySRADANTAALQAVVYNRVGdiGLIMAMA----WFGSNLNSWDIQQLFFISSSKE 208
Cdd:COG1008 130 ALDLFLFYVFWELMLIPMYFLIGIW-GGERRIYAAIKFFLYTLAG--SLLMLVAilalYFLAGALTFDIAELAAAPLPLT 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 209 LTLPLLGLILAA-AGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRLH-PLLSNNSTALTSCLL-LGAIT 284
Cdd:COG1008 207 AQLLLFLAFFIAfAVKVPMFPFHTWLPDAhVEAPTAGSVLL-AGVLLKMGGYGLLRFAlPLFPEASAYFAPLLAaLGVIG 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 285 TLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIG-LNQPHL--AFLHICTHAFFKAMLFLCSGSIIHNLNNeQDIRKMGG 361
Cdd:COG1008 286 IIYGALVALAQTDLKRLIAYSSVSHMGFVLLGIFaLNPLGLqgAVLQMVSHGLITAALFLLVGVLYDRTHT-RDIADLGG 364
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 18001020 362 LYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAmnTSHLNAWALILTLLATSFTAAYSLR 425
Cdd:COG1008 365 LAKRMPVLAALFLLAALASLGLPGTSGFVGEFLVLLG--AFQVNPWLAILAALGLILTAAYLLW 426
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
133-419 |
3.06e-23 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 103.82 E-value: 3.06e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 133 ANNLFQLFIGWEGVGIMSFLLIgWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQQLFFISSSkeltlp 212
Cdd:PRK12668 112 AGDLLTLFVFWELMAFTSTFLV-WARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAGLGGT------ 184
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 213 llGLILAAAG---KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHP---LLsnnstaltscLLLGAITTL 286
Cdd:PRK12668 185 --AAWLILIGfgvNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFPgteLL----------IYIGAAMAV 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 287 FMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQP---HLAFLHICTHAFFKAMLFLCSGSIIHNLNnEQDIRKMGGLY 363
Cdd:PRK12668 253 YGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTAlaiNGAVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLY 331
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 18001020 364 LTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLnAWALILTLLATSFT 419
Cdd:PRK12668 332 RSMPLTALFCLVGALSISAFPLFSGFVSKSMIISAAGEDHY-VWVWLLLLLASAGT 386
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
41-434 |
4.09e-23 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 103.42 E-value: 4.09e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 41 SAFFISLIS-LSIFIDQGLEVIIT-NWEWMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQFFK 118
Cdd:MTH00063 1 SVLLVSLLLcLLIFFLFLVGVSSSvSLNFLSFGGYSWLINFDFDYVTFGVLLMLLICFYYSLLYTFHYFGGSYASFLLNK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 119 YLLLFLLMMMILISANNLFQLFIGWEGVGIMSFLLIgWWYSRADANTAALQAVVYNRVGDIGL--IMAMAWFGSNLNSWD 196
Cdd:MTH00063 81 LIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLI-LFYDNFLSLRASVVTLVSSRFGDVCLflLIGLSCWGGSGSFLC 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 197 IQQLFFISSSKeltlpllglilaaagkSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLL--SNNSTAL 274
Cdd:MTH00063 160 CLFFFLIVFTK----------------SASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLgfSWLSIFF 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 275 TSCLLLgaiTTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQ 354
Cdd:MTH00063 224 SVLLLL---TIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQ 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 355 DIRKMGGLYLT---LPTTTSCLIIGslaLTGMPFLSGFFSKDAIIEAMNTSHLNAWALILTLLATSFTAAYSLR--IIFF 429
Cdd:MTH00063 301 SSNCVYSSILYgswNLFYLFLLVLG---LSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFRlcLILF 377
|
....*
gi 18001020 430 SLLNS 434
Cdd:MTH00063 378 GVKSS 382
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
229-409 |
1.48e-22 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 102.27 E-value: 1.48e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 229 LHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRLHPLLSNNSTALTSCLLL--GAITTLFMATCALTQNDIKKIVAFS 305
Cdd:PRK06521 229 LHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVVFDLLGAPGWWWGVLVLalGAISAVLGVLYALAEHDLKRLLAYS 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 306 TSSQLGLMMVTIGL-------NQPHLAFL-------HICTHAFFKAMLFLCSGSIIHNLNnEQDIRKMGGLYLTLPTTTS 371
Cdd:PRK06521 308 TIENIGIIFVGLGLamvfiayGMPLLAALaltaalyHLLNHALFKSLLFLGAGAVLHATG-TRDMEKLGGLIRRMPWTAW 386
|
170 180 190
....*....|....*....|....*....|....*....
gi 18001020 372 CLIIGSLALTGMPFLSGFFSKDAIIEA-MNTSHLNAWAL 409
Cdd:PRK06521 387 AFLIGCLAISALPPLNGFVSEWLLLQSlLSSPGLPQWGL 425
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
72-435 |
4.41e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 100.17 E-value: 4.41e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 72 SFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQFFKYLLLFLLMMMILISANNLFQLFIGWEGVGIMSF 151
Cdd:PRK08376 79 GFPIRIIWEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASY 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 152 LLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMA-WFG--SNLNSWDIQQLFFISSSKELTLPLLGLILAAAGKSAQFG 228
Cdd:PRK08376 159 ALVAFRNDTWEAIEAGIKYMFVGSLASSMVLLGIAlLYGqyGTLNMAYLAVKMSENPTVVAKIALALFIAGLAMKSGAVP 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 229 LHPWLPSAM-EGPTPVSALLHSSTmvVAGIFLLIR----LHPLLSNNSTALTSCLLLGAITTLFMATCALTQNDIKKIVA 303
Cdd:PRK08376 239 VHMWLPDAYpAAPSSISAMLLVIK--QAGLYALARvlfsIYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLA 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 304 FSTSSQLGLMMVTIG-----LNQPHL----------AFLHICTHAFFKAMLFLCSGSIIHNLNNeQDIRKMGGLYLTLPT 368
Cdd:PRK08376 317 YHSVSQIGYMLLGLGvglaaLGDPAMasygeialagGIYHIVNHALYKALLFLTAGAVIYETGT-RNLNELGGLARTMPK 395
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 18001020 369 TTSCLIIGSLALTGMPFLSGFFSKDAIIEAmnTSHLNAWALILTLLATSFTAAYSLRIIFFSLLNSP 435
Cdd:PRK08376 396 TTIAFLIGAAAIVGLPPFNGFASKWLIYES--SALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPP 460
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
41-414 |
4.54e-22 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 100.58 E-value: 4.54e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 41 SAFFISLISLSIFIDQGLEVIITNWEWMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEwYMHSDPYINQFFKYL 120
Cdd:PRK08667 39 IAIALLLFAGSLQLFTGNPLDIPLWGIAPGLDITFHIDRLAAFFIILIGLVSLCVAIYSLGYNE-HMSSNERANLLSALT 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 121 LLFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQQL 200
Cdd:PRK08667 118 ALFILSMLGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPL 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 201 FFisSSKELTLPLLGLILAAAGKSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIR-LHPLLSNNSTALTSCL 278
Cdd:PRK08667 198 GA--SAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRfLMDVLSPELWWGVLIL 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 279 LLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGL-------NQPHLAFL-------HICTHAFFKAMLFLCSG 344
Cdd:PRK08667 275 LAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLyvifgvyGLDTLALLalggalfHSLNHALFKSLLFLTAG 354
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 345 SIIHNLNNeQDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILTLL 414
Cdd:PRK08667 355 SVVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSFSVADPLIKILL 423
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
135-427 |
5.16e-20 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 93.29 E-value: 5.16e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 135 NLFQLFIGWEGVGIMSFLLIGWwYSRADANTAALQAVVYNRVGD----IGLIMAMAWFGSnLNSWDIQQLFFISSSKELT 210
Cdd:PRK08377 129 DIFNLFVFMEITAITAYALTAY-NKTGEAAEASMKYIVLGGIGSsfflIGVALIYGATGT-LNMAHIAQLAGTIDPTVAQ 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 211 LPLLGLILAAAGKSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRLHPLLSNN---STALTSCLLLGAITTL 286
Cdd:PRK08377 207 VGLALLIFGLAVEAELFPLNAWAPDAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNAngwSSVLKLVIIMATLTVF 285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 287 FMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQP---HLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQdIRKMGGLY 363
Cdd:PRK08377 286 FAELSALRQKNVKRMIAYSSIGQVGMIALALALGTQagvDAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLG 364
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 18001020 364 LTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAmNTSHLNAWALILTLLATSFTAAYSLRII 427
Cdd:PRK08377 365 KRMPLTALALTIGALSTVGIPLFNVFWSKFRIILA-GLSAGYTWPVALVLGASVVEAVYYFRLI 427
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
70-404 |
2.53e-19 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 91.98 E-value: 2.53e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 70 INSFSIMISFKFDFFSIMFLSVALFVTWSILEFA-EWYMHSDPYINQFfkyLLLFLLMMMILISANNLFQLFIGWEGVGI 148
Cdd:PRK08668 56 LFFGGFKLTFTLTHLSWFFAMISLLVIFSVAFFMvSEKTKNDAYFNMF---ALMSLAGVLGVFLANDLLTLYIFWEIMTF 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 149 MSFLLI--GWWYSRAdantAALQAVVYNRVGDIGLIMAM----AWFGSnLNSWDIQQLFFISSSKELTLPLLGLILAAA- 221
Cdd:PRK08668 133 SSFMMVpmGKKESRK----ASLKYFVLSAIGAYAMLYAIfliyAKTGT-FDFADISQGLINDTSTGFALIVFLFLLAFGv 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 222 GKSAQFGLHPWLPSAM-EGPTPVSALLHS--STMVVAGIFLLIRLHP---LLSNNSTALTSCLL------LGAITTLFMA 289
Cdd:PRK08668 208 AKAGIFPLHVWAPDAYsEAPQSFSAVLSGqlSKLGAYGFLLVLYVLPgtkLFSEFGTYRGVPLFnyilawLGNISIIVGT 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 290 TCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQP---HLAFLHICTHAFFKAMLFLCSGSIIHNlNNEQDIRKMGGLYLTL 366
Cdd:PRK08668 288 LMAILQEDIKKLIAYSSVANGGYILVGLGLGTSlgfAGGLFHVFNHALFKGLFFLIFAAVIYR-TGTTKISEMGGLIEKM 366
|
330 340 350
....*....|....*....|....*....|....*...
gi 18001020 367 PTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHL 404
Cdd:PRK08668 367 PFTFAMYLVAIISLAGIPPMSGFASKWLIFEALISKGM 404
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
227-420 |
3.53e-19 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 90.76 E-value: 3.53e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 227 FGLHPWLPSA-MEGPTPVSALLHSSTMVVAgIFLLIRLHPLLSNN-STALTSCLLL--GAITTLFMATCALTQNDIKKIV 302
Cdd:PRK06458 231 FPMHAWLPDAhSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDAAiGSDFPGRLLLifGLLSVLVAAFFLLRQRDIKRLF 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 303 AFSTSSQLGLMMVTIGLNQP---HLAFLHICTHAFFKAMLFLCSGSIIHNLNnEQDIRKMGGLYLTLPTTTSCLIIGSLA 379
Cdd:PRK06458 310 AYSSIEHMGLIAFALGIGGPlgiFAALLHMLNHSLTKSAIFFASGNVLQKYG-TRDINVIRGLLKVSPLTGWGLMLGALA 388
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 18001020 380 LTGMPFLSGFFSKDAIIEA-MNTSHLNAWALILTLLATSFTA 420
Cdd:PRK06458 389 IAGMPPFGVFISEFLILTAgLARGPLLIAILLLLLLTLAFAA 430
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
136-429 |
1.08e-17 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 86.16 E-value: 1.08e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 136 LFQLFIGWEGVGIMSFLLIGWWYSRADANtAALQAVVYNRVGD----IGLIMAMAWFGSnLNSWDI-QQLFFISSSKELT 210
Cdd:PRK12663 130 LFNLYVWFEVMLIASFVLITLGQEREQLR-GAIKYVVLNLIGSwlflLGIGLLYGTFGT-LNMAHIaMRLNDMGDTATLT 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 211 LPLLGLILAAAGKSAQFGLHpWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTALTSCLL--LGAITTLFM 288
Cdd:PRK12663 208 TIALLFLLAFGMKAALFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLatMAAITMVIG 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 289 ATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQP---HLAFLHICTHAFFKAMLFLCSGSIIHnLNNEQDIRKMGGLYLT 365
Cdd:PRK12663 287 ALGALAYKDIRRIAGYQVISSIGFILLGLALGTPagiNGAIFYLVHDMVVKTALFLIAGSLVR-LTGYRSLQYLGGLYRK 365
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 18001020 366 LPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTShlNAWALILTLLATSFTAAYSLRIIFF 429
Cdd:PRK12663 366 EPLFGALFLILIFAIGGLPPFSGFWGKVLLVQGALDN--GAYILLALMLITSLITMYSLFRIFF 427
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
132-427 |
9.98e-17 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 83.33 E-value: 9.98e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 132 SANNLFQLFIGWEGVGIMSFLLIGWWySRADANTAALQAVVYNRVGdiGLIM-----AMAWFGSN-LNSWDIQQLFFISS 205
Cdd:PRK05846 129 AALDLLLFYVFFEAMLIPMYFLIGVW-GGKNRIYAATKFFLYTLLG--SLLMlvaiiYLVVVYYNaTGTFDIADLLNLPL 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 206 SKELTLPLLGLILAA-AGKSAQFGLHPWLPSAM-EGPTPVSALLhsstmvvAGIFL------LIR-LHPLLSNNSTALTS 276
Cdd:PRK05846 206 PPGVQYWLFLAFFIAfAVKMPMFPLHTWLPDAHvQAPTAGSVLL-------AGILLkmgaygLLRfSLPLFPDASHEFAP 278
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 277 CLL-LGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIG-LNQPHL--AFLHICTHAFFKAMLFLCSGSIIHNLNN 352
Cdd:PRK05846 279 IIItLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFaGNQLGIqgAIFQMISHGLSSAALFLLVGVLYDRLHT 358
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 18001020 353 EqDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIeaMNTSHLNAWALILTLLATSFTAAYSLRII 427
Cdd:PRK05846 359 R-DIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLIL--LGSFQVNPVIAFIATTGLILAAVYSLWLY 430
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
221-398 |
2.36e-16 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 81.92 E-value: 2.36e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 221 AGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTALTSCLL--LGAITTLFMATCALTQNDI 298
Cdd:PRK07691 220 ATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFFSHDTSFTHYLIliLALLTIIFGVIGAVAYFDI 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 299 KKIVAFSTSSQLGLMMVTIGLNQPHL---AFLHICTHAFFKAMLFLCSGSIIHnLNNEQDIRKMGGLYLTLPTTTSCLII 375
Cdd:PRK07691 300 KKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFI 378
|
170 180
....*....|....*....|...
gi 18001020 376 GSLALTGMPFLSGFFSKDAIIEA 398
Cdd:PRK07691 379 AALSLAGIPPLSGFYGKFFIVEG 401
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
223-427 |
2.74e-15 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 78.62 E-value: 2.74e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 223 KSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLIRL-HPLLSNNSTALT-----SCLLLGAITTLFMATCALTQ 295
Cdd:PRK12662 222 KAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRIvYDVFKANFVFTTlpfnnVFMILAALAIVFGSVLAILS 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 296 NDIKKIVAFSTSSQLGLMMVTIGLNQPH---LAFLHICTHAFFKAMLFLCSGSIIHNLNNeQDIRKMGGLYLTLPTTTSC 372
Cdd:PRK12662 301 KDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHFGT-TKLEDCLNLWKSMPKITLA 379
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 18001020 373 LIIGSLALTGMPFLSGFFSKDAIIEAMNTSHlnAWALILTLLATSFTAA-YSLRII 427
Cdd:PRK12662 380 FVLLSLSLIGMPPTSGFVAKWYILDAFIKSN--AWIGLVVLLVGSGLSViYVWKIV 433
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
221-425 |
1.22e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 76.72 E-value: 1.22e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 221 AGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIRLHPLLSNNSTALTSCLLL---GAITTLFMATCALTQN 296
Cdd:PRK08676 217 LAKSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAAEQFSNVLiglGIFSIAVAAFSMLSQR 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 297 DIKKIVAFSTSSQLGLMMVTIGLNQPHLAF---LHICTHAFFKAMLFLCSGsIIHNLNNEQDIRKMGGLYLTLPTTTSCL 373
Cdd:PRK08676 296 NLKKLIAFSSIEHMGLMLLGIGIGTPLALFwmlFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQPVAAWGV 374
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 18001020 374 IIGSLALTGMPFLSGFFSKDAIIEAMN--TSHLNAWALILTLLATSFTAAYSLR 425
Cdd:PRK08676 375 ILGSAAIIGMPPFPLFLSKFFILLQLGgiSVWLVLAVLLLLLLAASSFAIFLLK 428
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
67-351 |
3.42e-14 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 75.46 E-value: 3.42e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 67 WMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQFFKYLLLFLLMMMILISANNLFQLFIGWEGV 146
Cdd:PRK08601 56 LIGANGDVVVGPWHLDTLAWLMAFFVLTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGAT 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 147 GIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQQLFFISS-----SKELTLPLLGLILAAA 221
Cdd:PRK08601 136 LLGLTLLIGLNKGWKVAREAAKISGMLFLISWLALALAIVWLFIATGEWQLTSVLSNENlaqlgTWEKTGINLLLILAVM 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 222 GKSAQFGLHPWLPSAMEGPTPVSALLHSStMVVAGIFLLIRLHPLLSNNsTALTSCLLLGAITTLFMATCALTQNDIKKI 301
Cdd:PRK08601 216 IPAAQWPFQRWLIESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLFHDD-IAQILLLIFASISVLIGTGISLVQVDYKRQ 293
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 18001020 302 VAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFKAMLFLCSGSIIHNLN 351
Cdd:PRK08601 294 LVGSTMAQMGFMLVQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN 343
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
223-424 |
1.21e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 73.46 E-value: 1.21e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 223 KSAQFGLHPWLP-SAMEGPTPVSA----LLhssTMVvaGIFLLIRLHPLLSNNSTALTSCLLLGAITTLFMATCALTQND 297
Cdd:PRK12665 222 KAAVFPLSFWLPdSYPTAPAPVTAvfagLL---TKV--GVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSD 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 298 IKKIVAFSTSSQLGLMMVTIGLNQPH---LAFLHICTHAFFKAMLFLCSGsIIHNLNNEQDIRKMGGLYLTLPTTTSCLI 374
Cdd:PRK12665 297 IKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFF 375
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 18001020 375 IGSLALTGMPFLSGFFSKDAIIEA--MNTSHLnAWALILTLLATSFTAAYSL 424
Cdd:PRK12665 376 VPALNLGGIPPFSGFIGKVALLEAgaEDGTWL-AWALVAGGVVTSLLTLYAV 426
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
132-427 |
1.94e-13 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 72.84 E-value: 1.94e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 132 SANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWF----GSnlnswdiqqLFFISSSK 207
Cdd:COG1007 120 SANDLLTLFLGLELLSLSLYVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLygatGS---------LNLAGIAA 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 208 ELTLPLLGLILAAAG----------KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIR-LHPLLSNNSTALT 275
Cdd:COG1007 191 ALAAGGANSPLLLLGlvlvlaglafKLSAVPFHMWTPDVYEGaPTPVTAFL-ATAPKIAAFAALLRlLVEAFPGLAADWQ 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 276 SCLLLGAITTLFM-ATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPH---LAFLHICTHAFFKAMLFLCSGSIIHNLN 351
Cdd:COG1007 270 LLLAVLAVLSMTVgNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPLgvsAALFYLLAYLFMNLGAFAVILLLSRKGG 349
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 18001020 352 NEQDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLnAWALILTLLATSFTAAYSLRII 427
Cdd:COG1007 350 EAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEAGL-YWLAVIAVLNSVISAYYYLRVV 424
|
|
| Proton_antipo_N |
pfam00662 |
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ... |
67-117 |
1.64e-12 |
|
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.
Pssm-ID: 459895 [Multi-domain] Cd Length: 51 Bit Score: 62.06 E-value: 1.64e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 18001020 67 WMNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQFF 117
Cdd:pfam00662 1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
43-392 |
2.08e-12 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 69.65 E-value: 2.08e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 43 FFISLISLSIFIdqglevIITNWEWMNINSFSIMISFKFDFFSIMF-LSVALFVTWSILEFAEWYMHSDPYINQFFKYLL 121
Cdd:CHL00049 45 YFISSTSLVMSI------TALLFQWREEPMISFSGNFQTNNFNEIFqFLILLCSTLCIPLSVEYIECTEMAITEFLLFVL 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 122 LFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGwwYSRAD--ANTAALQAVVYNRVGDIGLIMAMAWF----GSNLNSW 195
Cdd:CHL00049 119 TATLGGMFLCGANDLITIFVALECLSLCSYLLSG--YTKKDvrSNEATMKYLLMGGASSSILVYGFSWLyglsGGEIELQ 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 196 DIQQLFFISSSKELTLPLLGLILAAAG---KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIR----LHPLL 267
Cdd:CHL00049 197 EIVNGLINTQMYNSPGISIALIFITVGigfKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRifdiPFYFS 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 268 SNNSTaltscLLLGAITTLFMAT---CALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHLAFLHICTHAFFkaMLFLCSG 344
Cdd:CHL00049 276 SNEWH-----LLLEILAILSMILgnlIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLF--YIFMNLG 348
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 18001020 345 S----IIHNLNNEQD-IRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSK 392
Cdd:CHL00049 349 TfaciVLFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
229-389 |
2.62e-12 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 69.47 E-value: 2.62e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 229 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHplLSNNSTAL---TSCLLLGAITTLFMATCALTQNDIKKIVAFS 305
Cdd:PRK08042 199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLS--LLGGNAPLwwgVALLVLGMITAFVGGLYALMEHNIQRLLAYH 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 306 TSSQLGLMMVTIG-------LNQPHLAFL-------HICTHAFFKAMLFLCSGSIIHNlNNEQDIRKMGGLYLTLPTTTS 371
Cdd:PRK08042 277 TLENIGIILLGLGagvtgiaLEQPALIALglvgglyHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISI 355
|
170
....*....|....*...
gi 18001020 372 CLIIGSLALTGMPFLSGF 389
Cdd:PRK08042 356 AMLVGLMAMAALPPLNGF 373
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
133-391 |
2.84e-12 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 69.29 E-value: 2.84e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 133 ANNLFQLFIGWEGVGIMSFLLIGWWYSRaDANTAALQAVVYNRVGDIGLI---MAMAWFGSNLnSWDIQQLFFISSSKEL 209
Cdd:PRK12561 106 AQDLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASIFILvagLALALSGDTF-TFDLAELGAKSYPLAL 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 210 TLPLLGLILAAAG-KSAQFGLHPWLPSAM-EGPTPVSallhsstMVVAGIFL------LIRLH-PLLSNNSTALTSCLL- 279
Cdd:PRK12561 184 ELLLYAGFLIAFGvKLPIFPLHTWLPDAHgEASAPVS-------MILAGVLLkmggyaLIRFNvQMLPDAHVYFAPALAi 256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 280 LGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTI------GLNQphlAFLHICTHAFFKAMLFLCSGSI---IHNL 350
Cdd:PRK12561 257 LGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIaaftdlGISG---AMLQMISHGLIAAALFFLTGVTyerTHTL 333
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 18001020 351 NneqdIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFS 391
Cdd:PRK12561 334 S----IPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVS 370
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
229-414 |
9.44e-11 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 63.69 E-value: 9.44e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 229 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLirlhpLLSNNSTALTSCLLLGAITTLFMATCALTQNDIKKIVAFSTSS 308
Cdd:MTH00112 111 FHFWLPEVLQGSTTTTALILSTWQKLAPLTLL-----LMTSNSLNPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 309 QLGLMMVTIGLNqPHLAFLHICTHAFFKAMLFLcsgsiIHNLNNEQDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSG 388
Cdd:MTH00112 186 HLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL-----TLNTTSTKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTG 259
|
170 180
....*....|....*....|....*.
gi 18001020 389 FFSKDAIIEAMNTSHLNAWALILTLL 414
Cdd:MTH00112 260 FMPKWLILQELTKQNMTPTATIMAML 285
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
132-427 |
9.85e-11 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 64.46 E-value: 9.85e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 132 SANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVynrVGDIG---LIMAMAW---FGSNLNSWDIQQLFFISS 205
Cdd:PRK05777 121 SANDLLTLFLGLELLSLPLYALAALRRDRRRSLEAAIKYFV---LGALAsgfLLYGMSLlygATGSLSFAGIAKALADGS 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 206 SKELTLPLLGLILAA--AGKSAQFGLHPWLPSAMEG-PTPVSALLHSSTMvVAGIFLLIR-LHPLLSNNSTALTSCLLLG 281
Cdd:PRK05777 198 GNSLLLLFGLVFLLVglAFKLSAVPFHMWTPDVYEGaPTPVTAFLATAPK-IAAFAVLLRlLVVAFGGLSEDWQQVLAII 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 282 AITTLFM-ATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPH---LAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIR 357
Cdd:PRK05777 277 AIASMLVgNLAALSQTNIKRLLAYSSIAHAGYLLVGLAAGTAEgysAVLFYLLAYLFMTLGAFGVISLLRRKGGEAESIS 356
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 358 KMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLnAWALILTLLATSFTAAYSLRII 427
Cdd:PRK05777 357 DFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFEAAVEAGL-WWLAVIGVLNSAIGAFYYLRVI 425
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
243-398 |
1.71e-10 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 63.51 E-value: 1.71e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 243 VSALLHS-STMVVAGIFLLI-RLHPLLSNNSTALTSCLLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLN 320
Cdd:PRK06277 233 GSALLQTfSKFVLVALMLVIfKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALG 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 321 QPH---LAFLHICTHAFFKAMLFLCSGsIIHNLNNEQDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIE 397
Cdd:PRK06277 313 TPLgivAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQ 391
|
.
gi 18001020 398 A 398
Cdd:PRK06277 392 A 392
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
132-389 |
2.33e-09 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 59.94 E-value: 2.33e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 132 SANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQQLF---FISSSKE 208
Cdd:MTH00226 149 SVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLAscsHVVSEQT 228
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 209 LTLPLLGLILAAAGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTALTSCLL-LGAITTL 286
Cdd:MTH00226 229 QKWIFLGIFLAMAVKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIaMGIVGIV 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 287 FMATCALTQNDIKKIVAFSTSSQLGLMMVT------IGLNQPHLAFLhicTHAFFKAMLFLCSgSIIHNLNNEQDIRKMG 360
Cdd:MTH00226 309 YGSFATCRQIDVKRLVAYSSVAHMGLVSITlvthdiIGLTGSIFIML---AHGIVSSLLFILV-TILYDRHHTRLIKYYR 384
|
250 260
....*....|....*....|....*....
gi 18001020 361 GLYLTLPTTTSCLIIGSLALTGMPFLSGF 389
Cdd:MTH00226 385 GLSITMPIWGTIMIVTSLANVAVPPSGNF 413
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
132-391 |
3.80e-09 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 59.19 E-value: 3.80e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 132 SANNLFQLFIGWEGVGIMSFLLIGWWYSRADAnTAALQAVVYNRVGDIGLIMA---MAWFGSNLNSWDIQQL-------- 200
Cdd:CHL00011 130 SSRDLLLFFIMWELELIPVYLLLSMWGGKKRL-YSATKFILYTAGGSIFLLIGvlgMGLYGSNEPTLNFETLanqsypva 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 201 --------FFIssskeltlpllglilAAAGKSAQFGLHPWLPSamegpTPVSAllHSST-MVVAGIFL------LIRLHP 265
Cdd:CHL00011 209 leilfyigFLI---------------AYAVKLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLkmgaygLIRINM 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 266 LLSNNSTALTSCLL--LGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTI------GLNQphlAFLHICTHAFFKA 337
Cdd:CHL00011 267 ELLPHAHSIFSPWLviVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIgsitdtGLNG---AILQIISHGFIGA 343
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 338 MLFLCSGSI---IHNLNNEQdirkMGGLYLTLP---TTTSCLIIGSLALTGMpflSGFFS 391
Cdd:CHL00011 344 ALFFLAGTSydrIRLVYLDE----MGGIAIPMPkifTMFSSFSMASLALPGM---SGFVA 396
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
227-432 |
9.02e-09 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 58.17 E-value: 9.02e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 227 FGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLIR--LHPLLSNNSTALTSCLLLGAITTLFMATCALTQNDIKKIVA 303
Cdd:PRK06473 222 VPFHTWLPDAhVEASTPVSVLL-AGVLLKLGTYGLLRfgVGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVA 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 304 FSTSSQLGLMMVTIGLNQP---HLAFLHICTHAFFKAMLFLCSGsIIHNLNNEQDIRKMGGLY---LTLPTTTSCLIIGS 377
Cdd:PRK06473 301 YSSIGHMGYILLAAAAATPlsiLAAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGLLnpeRGLPITGSLMILGV 379
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 18001020 378 LALTGMPFLSGFFSKDAIIEAmnTSHLNAWALILTLLATSFTAAYSLRII---FFSLL 432
Cdd:PRK06473 380 MASAGIPGMVGFIAEFLVFRG--SFPIFPVQTLLCMIGTGLTAVYFLLLVnrvFFGRL 435
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
66-422 |
3.07e-08 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 56.60 E-value: 3.07e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 66 EWMNINSFSIMISFKFDFFSIMFLS-VALFVTWSILEFAEWYMHSDPYINQFFKYLLLFLLMMMILISANNLFQLFIGWE 144
Cdd:PRK02504 61 QWDNPNPISFLGSFNADNLSIAFRAiIALSTLVTLLMSWRYVEQSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLE 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 145 GVGIMSFLLIGWWYSRADANTAALQavvYNRVGDIGliMAMAWFGSNL---------NSWDIQQLFFISSSKELTLPLLG 215
Cdd:PRK02504 141 TLSIASYLLTGYMKRDPRSNEAALK---YLLIGAAS--SAIFLYGSSLlyglsggstQLSAIALALITSPSLGLALALVF 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 216 LILAAAGKSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLIRLhpllsnnstaLTSC---------LLLGAITT 285
Cdd:PRK02504 216 VIAGIAFKISAVPFHQWTPDVYEGsPTPVVAFL-SVGSKAAGFALAIRL----------LVTAfpsfdeqwkLLFTALAI 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 286 LFMA---TCALTQNDIKKIVAFSTSSQLGLMMvtIGLnqphlaflhIC-THAFFKAMLF---------LC--SGSIIHNL 350
Cdd:PRK02504 285 LSMVlgnVVALAQTSMKRMLAYSSIGQAGFVM--IGL---------VAgTEAGYASMVFyllaylfmnLGafACVILFSL 353
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 18001020 351 NNEQD-IRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLnaWALILTLLATSFTAAY 422
Cdd:PRK02504 354 RTGTDqISDYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGKIYLFWAGWQAGL--YLLVLVGLVTSVISIY 424
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
223-424 |
1.20e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 54.47 E-value: 1.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 223 KSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVvaGIFLLIRLHPLLSNNSTALTS-----CLLLGAITTLFMATC-ALTQ 295
Cdd:PRK12666 223 KAAMWPLNFWLPPAyAAASAPVAALFAIMTKV--GIYAILRLSTLLFGPEAGASAgfgqdWLLPGGLATLAFGAIgVLAA 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 296 NDIKKIVAFSTSSQLGLMMVTIGLNQPHL---AFLHICTHAFFKAMLFLCSGSI----------------IHNLNNEQDI 356
Cdd:PRK12666 301 QRLRRLAAYLVLVSSGTLLAAIGLGNPAAtaaALYYLVHSTLAAAALFLLADLVerqrgaaadrlavtpeLYDLDEEEEE 380
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 357 RKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHL--NAWALILTLLATSFTAAYSL 424
Cdd:PRK12666 381 EVGVAIPATMALLGLLFFICALALAGLPPLSGFLGKFALLQALLNPPGagAAWWLWALVLLSGLAALIAL 450
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
229-389 |
4.67e-07 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 52.79 E-value: 4.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 229 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTALTSCLL--LGAITTLFMATCALTQNDIKKIVAFST 306
Cdd:PRK07363 224 LHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLaiIGTISVIYGALSAIAQKDIKRMVAYSS 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 307 SSQLGLMMVTIGLNQPHL---AFLHICTHAFFKAMLFLCSGsIIHNLNNEQDIRKMGGLY---LTLPTTTSCLIIGSLAL 380
Cdd:PRK07363 304 IGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMnpiRGLPLTSALLVLAGMAS 382
|
....*....
gi 18001020 381 TGMPFLSGF 389
Cdd:PRK07363 383 AGIPGLVGF 391
|
|
| ND2 |
MTH00070 |
NADH dehydrogenase subunit 2; Provisional |
229-418 |
1.09e-06 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177142 [Multi-domain] Cd Length: 346 Bit Score: 51.08 E-value: 1.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 229 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLHPLLsnNSTALTsclLLGAITTLFMATCALTQNDIKKIVAFSTSS 308
Cdd:MTH00070 111 FHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLL--NSNLLI---IMGLLSTLIGGWGGLNQTQLRKIMAYSSIA 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 309 QLGLMMVTIGLNqPHLAFLH-----ICTHAFFKAMLFLcsgsiihnlnNEQDIRKMGGLYLTLPTTTSCLIIGSLALTGM 383
Cdd:MTH00070 186 HLGWMIIILTFS-PHLTLLNlliylIMTSSMFLMLMNL----------NSTNINKLSSSWSKNPTLTSMMMLTLLSLGGL 254
|
170 180 190
....*....|....*....|....*....|....*...
gi 18001020 384 PFLSGFFSKDAIIEAM---NTSHLNAWALILTLLATSF 418
Cdd:MTH00070 255 PPTTGFIPKWLILQELtkqNLTTLATLMALSALLSLFF 292
|
|
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
132-424 |
1.43e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 51.22 E-value: 1.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 132 SANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQQLFFISSSKELTL 211
Cdd:MTH00204 130 SVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLSIQK 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 212 -PLLGLILAAAGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAGIFLLIRLHPLLSNNSTALTSC-LLLGAITTLFM 288
Cdd:MTH00204 210 wLLVGFFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLiVMLSVIAVIYG 289
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 289 ATCALTQNDIKKIVAFSTSSQLGLmmVTIGLNQPHL-----AFLHICTHAFFKAMLFLCSgSIIHNLNNEQDIRKMGGLY 363
Cdd:MTH00204 290 SLTTCRQVDFKRLIAYSSVAHMGL--VPLGLFTHTIeglvaAVFLMLAHGFVSSALFIAV-TFLYERHHTRLIKYYRGLT 366
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 18001020 364 LTLPTTTSCLIIGSLALTGMP----FLSGFFSKDAIIEamntshLNAWALILTLLATSFTAAYSL 424
Cdd:MTH00204 367 LTMPLFVIIMLVLSLANMGFPlscnFVGEFFSLLAAFE------YSLGLGVLVTSGMVWSAAYSL 425
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
278-405 |
3.22e-06 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 50.11 E-value: 3.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 278 LLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPH-----LAFLHICTHAFFKAMLFLCSGSIIhNLNN 352
Cdd:PRK12664 205 LFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVI-NRTR 283
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 18001020 353 EQDIRKMGGLYlTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLN 405
Cdd:PRK12664 284 KFNLNRVGGLF-KMSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLT 335
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
68-424 |
4.70e-06 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 49.17 E-value: 4.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 68 MNINSFSIMISFKFDFFSIMFLSVALFVTWSILEFAEWYMHSDPYINQ--FFKYLLLFLLMMMILISANNLFQLFIGWEG 145
Cdd:MTH00206 44 SEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEPINRQriYITLLIVLQLFLILFFSSSNLLLFYILFEA 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 146 VGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQQLFFISSSKELTLPLLGLILAA-AGKS 224
Cdd:MTH00206 124 SLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILYFSKLTTWNNNLWWLACILAfLVKL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 225 AQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LIRLHPLLSNNSTALTSCLL-LGAITTLFMATCALTQN 296
Cdd:MTH00206 204 PLYGVHLWLPKAhVEAPV-------AGSMVLAGVLLklggygMMRIILILGPSTKLSSYFFIiLGLWGSIMTSSICLRQT 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 297 DIKKIVAFSTSSQLGLMMVTIGLNQP---HLAFLHICTHAFFKAMLFlCSGSIIHNLNNEQDIRKMGGLYLTLPTTTSCL 373
Cdd:MTH00206 277 DLKSLIAYSSVSHMSLVTAGILSGSPwgfKGALLLMIAHGLVSSALF-CLANLLYERSHTRTILGNRGLQMILPLLSFWW 355
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 18001020 374 IIGSLALTGMPFLSGFFSKDAIIeaMNTSHLNAWALILTLLATSFTAAYSL 424
Cdd:MTH00206 356 LLFFLANLGLPPFPNLFGELLII--TSLFSWSNFTLPLLGLGFLFTAIYSL 404
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
132-474 |
1.88e-05 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 47.64 E-value: 1.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 132 SANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQQLFFIS----SSK 207
Cdd:MTH00127 112 GATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLQYSQplqlSSW 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 208 ELTLPLLGLILAAAGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAG---IFLLIRLHPLLSNNSTALTSCLLLGAI 283
Cdd:MTH00127 192 ADKLWWAGCLLAFLVKMPLYGVHLWLPKAhVEAPIAGSMVLAAVLLKLGGygmMRMMVMLDPLTKELSYPFIILALWGII 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 284 TTlfmATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPHL---AFLHICTHAFFKAMLFlCSGSIIHNLNNEQDIRKMG 360
Cdd:MTH00127 272 MT---GSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGftgALILMIAHGLTSSALF-CLANTNYERTHSRTMLLAR 347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 361 GLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMntSHLNAWALILTLLATSFTAAYSLriifFSLLNSPRYPsl 440
Cdd:MTH00127 348 GLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSL--FNWSPWTLALTGLGTLITAGYSL----YMFLMTQRGP-- 419
|
330 340 350
....*....|....*....|....*....|....
gi 18001020 441 lplfesdiTTNPIKRLAWGSTIAGLMIILNLFPI 474
Cdd:MTH00127 420 --------LPDHIIALNPSHTREHLLMALHLLPL 445
|
|
| ND2 |
MTH00011 |
NADH dehydrogenase subunit 2; Validated |
230-440 |
8.05e-05 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 164587 [Multi-domain] Cd Length: 330 Bit Score: 45.16 E-value: 8.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 230 HPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIrlhplLSNNSTALTSCLLLGAITTLFMATCALTQNDIKKIVAFSTSSQ 309
Cdd:MTH00011 108 HFWFPSVMSSISWTLCLILSTWQKIAPLSILF-----FFTSHNILPMMTSMAAMSALAGGLGGMNQTQLRPLLAYSSIGH 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 310 LGLMMVtIGLNQPHLAFLHICTHAFFKAMLFLCSGSI-IHNLNNEQDIRKMGglyltlPTTTSCLIIGSLALTGMPFLSG 388
Cdd:MTH00011 183 MGWMTM-ISVFSPSMAILYFMTYIIITTPLMLLFAYLnAFSTKFNSKISSMS------QTTSMSLFIMLLSLGGLPPFTG 255
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 18001020 389 FFSKDAIIEAMNTSHLNAWALILtLLATSFTAAYSLRIIFFSLLNSPRYPSL 440
Cdd:MTH00011 256 FMPKLMAIETLTSNSMILILLVL-IVGSLMNLFYYLNLIFNFMYLSPTFSSL 306
|
|
| ND2 |
MTH00135 |
NADH dehydrogenase subunit 2; Provisional |
184-417 |
9.11e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177193 [Multi-domain] Cd Length: 347 Bit Score: 44.80 E-value: 9.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 184 AMAWFGSNLN-----SWDIQQLFfissskeLTLPLLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIF 258
Cdd:MTH00135 68 AMILFASTTNawltgQWDIQQMS-------HPLPTTMITLALALKIGLAPLHFWLPEVLQGLDLTTGLILSTWQKLAPFA 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 259 LLIRLHPllsNNSTALTsclLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNqPHLAFLHICTHAFFKAM 338
Cdd:MTH00135 141 LILQIAP---TNPTLLI---TLGLTSTLVGGWGGLNQTQLRKILAYSSIAHLGWMILVLQFS-PSLTLLALLTYIIMTSS 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 339 LFLcsgsiIHNLNNEQDIRKMGGLYLTLP--TTTSCLIIGSLAltGMPFLSGFFSKDAIIEAMNTSHLnawALILTLLAT 416
Cdd:MTH00135 214 AFL-----TFKLNSSTKINTLATSWTKAPalTALTPLILLSLG--GLPPLTGFMPKWLILQELTKQDL---PLTATLAAL 283
|
.
gi 18001020 417 S 417
Cdd:MTH00135 284 S 284
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
227-434 |
9.88e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 44.88 E-value: 9.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 227 FGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLirlhPLLSNNSTALTSCLLLGAITTLFMATCALTQNDIKKIVAFST 306
Cdd:MTH00144 101 FPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLL----SNFLDLYWLAYLLCVISVLSALVGSIGGLNQTQVRALLAYSS 176
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 307 SSQLGLMMVTIGLNQPHL---AFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLyltlptttSCLIIGSLAltGM 383
Cdd:MTH00144 177 ISHTGWMLVAILHGSWLMwmyFLIYIVSSGFLFFSLWSGDSGSMKDLGSLKPSYKTGLS--------IISLLLSLG--GL 246
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 18001020 384 PFLSGFFSKDAIIEAMNTShlNAWALILTLLATSFTA-AYSLRIIFFSLLNS 434
Cdd:MTH00144 247 PPFLGFCSKLLVLISSMES--SPLLLILLLLLGSLISlFFYLSVFFSSFLSS 296
|
|
| ND2 |
MTH00197 |
NADH dehydrogenase subunit 2; Provisional |
227-434 |
1.66e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177244 [Multi-domain] Cd Length: 323 Bit Score: 43.89 E-value: 1.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 227 FGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIrlhpLLSNNSTALTSClllGAITTLFMATCALTQNDIKKIVAFST 306
Cdd:MTH00197 96 FPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILA----FNSSSFMGLLIC---SVLSSLIGGIGGMNQSNIRQLLAYSS 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 307 SSQLGLMMVTIGLNQPHLAFLHIcthAFFKAMLFLCSgsiIHNLNNEQDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFL 386
Cdd:MTH00197 169 IGHTGWMLMSLVYSPSIFMLYYL---IYFVIMFMLFL---FLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPL 242
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 18001020 387 SGFFSKDAIIEAMNTSHLNAWALILTlLATSFTAAYSLRIIFFSLLNS 434
Cdd:MTH00197 243 SGFFLKWLILTSLLSSNISLITFMLI-LSTCFSLYYYLSLAYKSLILS 289
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
184-435 |
2.01e-04 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 43.80 E-value: 2.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 184 AMAWFGSNLNSWDIQQLFFISSSkeLTLPLLGLILAAAGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRL 263
Cdd:MTH00200 68 ALLLFGGLLNAWTSGQWGISEML--GPLSETLILLALALKLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQL 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 264 HPLLSNNSTaltscLLLGAITTLFMATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNqPHLAFLHicthaFFKAMLFLCS 343
Cdd:MTH00200 146 APALNSNIL-----LLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLY-----LLLYVIITLT 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 344 GSIIHNLNNEQDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSGFFSKDAIIEAMNTSHLNAWALILtLLATSFTAAYS 423
Cdd:MTH00200 215 VFLLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQELSKQGLFIYATIL-LLGSLLSLFFY 293
|
250
....*....|..
gi 18001020 424 LRIIFFSLLNSP 435
Cdd:MTH00200 294 LRLSYLTLLTLS 305
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
135-319 |
3.26e-04 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 43.50 E-value: 3.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 135 NLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSWDIQQLFFISSSKEL-TLPL 213
Cdd:MTH00217 130 DLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIEKELqYFIF 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 214 LGLILAAAGKSAQFGLHPWLPSA-MEGPTPVSALLhsstmvvAGIFL------LIRLH-PLLSNNS---TALTSCLLLGA 282
Cdd:MTH00217 210 LGFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVIL-------AGVLLklggygFIRFSwPLLPEASeyfSPLIQTLSLLA 282
|
170 180 190
....*....|....*....|....*....|....*..
gi 18001020 283 ITTLFMATCalTQNDIKKIVAFSTSSQLGLmmVTIGL 319
Cdd:MTH00217 283 IIYGSLTTC--RQVDLKRIIAYSSVAHMGL--VTLGI 315
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
227-402 |
3.27e-04 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 43.54 E-value: 3.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 227 FGLHPWLPSAM-EGPTPVSALLhsstmvvAGIFL------LIRLHPLLSNNSTALTSCLL--LGAITTLFMATCALTQND 297
Cdd:PRK02546 230 VPLHTWLPDAHgEATAPVHMLL-------AGILLkmggyaLLRMNAGMLPDAHAQFAPLLivLGVVNIIYAALTSFAQRN 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 298 IKKIVAFSTSSQLGLMMVTIGLNQP---HLAFLHICTHAFFKAMLFLCSGSI---IHNLNNEQdirkMGGLYLTLPTTTS 371
Cdd:PRK02546 303 LKRKIAYSSISHMGFVLIGIGSFTDlgtSGAMLQMISHGLIGASLFFLVGATydrTHTLMLDE----MGGVGQKMRKMFA 378
|
170 180 190
....*....|....*....|....*....|.
gi 18001020 372 CLIIGSLALTGMPFLSGFFSKDAIIEAMNTS 402
Cdd:PRK02546 379 MWTACSLASLALPGMSGFVAELMVFVGFATS 409
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
227-424 |
1.66e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 41.33 E-value: 1.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 227 FGLHPWLPSA-MEGPTPVSallhsstMVVAGIFL------LIRLHPLLSNNSTALTSCLLL----GAITTlfMATCaLTQ 295
Cdd:MTH00124 210 YGLHLWLPKAhVEAPIAGS-------MVLAAILLklggygIIRITLLLPPLSNTLHYPFLTlalwGALMT--SLIC-LRQ 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 296 NDIKKIVAFSTSSQLGLMMVTIgLNQPHLAF-----LHIcTHAFFKAMLFlCSGSIIHNLNNEQDIRKMGGLYLTLPTTT 370
Cdd:MTH00124 280 TDLKSLIAYSSVSHMGLVIAAT-MIQTPWSLsgamiLMI-AHGLTSSMLF-CLANTNYERTHSRTLLLTRGLQLLLPLMT 356
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 18001020 371 SCLIIGSLALTGMPFLSGFFSKDAIIEAM-NTSHLnawALILTLLATSFTAAYSL 424
Cdd:MTH00124 357 TWWLLANLTNMALPPTINLMGELTIMTSLfNWSPT---TIILTGLATLITASYTL 408
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
45-439 |
2.29e-03 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 40.73 E-value: 2.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 45 ISLISLSIFIDQGLEVIITNWEWMNINSFSIMISFkfdfFSIMFLSVALFVTWSILEF--------------AEW----- 105
Cdd:MTH00044 2 ITLILLSLGIAITSWIVPKNKLWPISISQSSLISL----LSLFLLNNHWSSSWHNLSLslatdslsspliilSCWlapls 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 106 ------YMHSDPYINQ--FFKYLLLFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGWWYSRADANTAALQAVVYNRVG 177
Cdd:MTH00044 78 llasinHLSNNSPNNQrtFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFG 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 178 DIGLIMAMAWFGSNLNSWDIQQLFFISSSKELTLPL----LGLILAAAGKSAQFGLHPWLPSA-MEGPTPVSallhsstM 252
Cdd:MTH00044 158 SLPLLISLIAIYSSSSSLSIPLSELNWLTSLSSNSSsiwwIFCILAFLVKMPIYGFHLWLPKAhVEAPVAGS-------M 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 253 VVAGIFL------LIRL-----HPLLSNNSTALTSCLLLGAITTLFMAtcaLTQNDIKKIVAFSTSSQLGLMMVTIGLNQ 321
Cdd:MTH00044 231 ILAAILLklggygLIRLinlfsLPSANNISFILIVFCCWGALITSIIC---LRQTDLKALIAYSSVGHMSLVAAGIFSGT 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 322 P---HLAFLHICTHAFFKAMLFlCSGSIIHNLNNEQDIRKMGGLYLTLPTTTSCLIIGSLALTGMPFLSgffskDAIIEA 398
Cdd:MTH00044 308 NwgiNGALILMIAHGLVSSALF-CLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLP-----NLIGEL 381
|
410 420 430 440
....*....|....*....|....*....|....*....|....
gi 18001020 399 MNTSHLNAWALILTL---LATSFTAAYSLRIifFSLLNSPRYPS 439
Cdd:MTH00044 382 LIISSIISWSILSFPiigLATVFGAIYSLLI--YQLTNSGSFPS 423
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
230-435 |
2.34e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 40.40 E-value: 2.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 230 HPWLPSAMEG-PTPVSALLhsSTMVVAGIFLLirlhpLLSNNSTAltSCLLLGAITTLFM-ATCALTQNDIKKIVAFSTS 307
Cdd:MTH00196 115 HMWAPDVYEGaPTKTTALL--AIVPKLGIFSI-----LVSIGLNV--NILLIGGLFSLFVgAIGALNQTKIKRLLAYSGI 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 308 SQLGLMMVTIGLNQphLAFLHIC-THAFFKAMLFLCSGSIIHNLNNEQD-IRKMGGLYLTLPTTTSCLIIGSLALTGMPF 385
Cdd:MTH00196 186 GHMGFVLWGIEIGS--FESIQASlVYLFIYIIMSICVFSIILALNVYKNlIIEFSGLSRRLPILAITLALTFLSIAGIPP 263
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 18001020 386 LSGFFSKDAIIEAMNTSHLnAWALILTLLATSFTAAYSLR---IIFFSLLNSP 435
Cdd:MTH00196 264 LVGFLGKWLILLSGVVYQY-YLIFLLAVFCSVIAGVYYVRivkILFFQANSFL 315
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
83-319 |
2.46e-03 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 40.93 E-value: 2.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 83 FFSIMFLSVALFVTWSILEfaewYMHSDPYINQFFkylLLFLLMMMILISANNLFQLFIGWEGVGIMSFLLIGWWysrAD 162
Cdd:PRK06459 48 FFSIISTIVWILASLYSIE----YDHYGKWLSSLY---ILTILGMAIVLTSDNYLLFLAGWEIMTIPSYVAIALT---KK 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 163 ANTAALQAVVYNRVGDIGLIMAMAWFGSNLNSwdiqqlffisSSKELTLPLLGLILAAAGKSAQFGLHP-----WLPSAM 237
Cdd:PRK06459 118 NKRPAFVFMAFGELSTVLILAGFAWAFIISGT----------TNFSYLPSPVPLILASFGFIIKMGMMPflvseWLPIAH 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 238 -EGPTPVSALLhSSTMVVAGIFLLIRLHPLLSNNSTALTSCLLL--GAITTLFMATCALTQNDIKKIVAFSTSSQLGLMM 314
Cdd:PRK06459 188 gNAPSNFSAIL-SATMTLMGVYGILKMTILTQTIPIGYFGLTILaiGAFSILFGALYAYVSENVKGLLAFSTIENNGAIL 266
|
....*
gi 18001020 315 VTIGL 319
Cdd:PRK06459 267 VALGL 271
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
227-424 |
7.21e-03 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 39.13 E-value: 7.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 227 FGLHPWLPSA-MEGPTPVSallhsstMVVAGIFL------LIRLHPLLSNNSTALTSCLLLGAITTLFM-ATCALTQNDI 298
Cdd:MTH00068 210 YGLHLWLPKAhVEAPIAGS-------MILAAVLLklggygILRISILLTPLSKELSYPFIILALWGVLMtSLICLRQTDL 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 18001020 299 KKIVAFSTSSQLGLMmVTIGLNQPHLAF-----LHIcTHAFFKAMLFlCSGSIIHNLNNEQDIRKMGGLYLTLPTTTSCL 373
Cdd:MTH00068 283 KSLIAYSSVSHMGLV-IAAALIQTPWSFsgaiiLMI-SHGLTSSALF-CLANTNYERTHSRTLLLLRGAQTILPLMATWW 359
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 18001020 374 IIGSLALTGMPFLSGFFSKDAIIEAM-NTSHlnaWALILTLLATSFTAAYSL 424
Cdd:MTH00068 360 LLSNLSNMALPPSPNLWGELTIMVSLfNWSN---WTILITGLGTLITAAYTL 408
|
|
| |
