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Conserved domains on  [gi|1834962045|ref|YP_009758637|]
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ATP synthase F0 subunit 8 (mitochondrion) [Liponema brevicorne]

Protein Classification

ATP8 family protein( domain architecture ID 10009529)

ATP8 family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP8 MTH00025
ATP synthase F0 subunit 8; Validated
 1-70 3.25e-26

ATP synthase F0 subunit 8; Validated


:

Pssm-ID: 214404  Cd Length: 70  Bit Score: 90.89  E-value: 3.25e-26
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1834962045  1 MPQLETATYLTQYRWTLIALFLLFSFLVISVLPVIKTNFLIRRSVGVSWTGAPKTSDLNKGPASLWSQDK 70
Cdd:MTH00025   1 MPQLDTTTYLTQYRWTLIVLFLLLFFLVFFVLPTIKRNWLIRKSLMKKGAAFSKGLGLNKEVVFIWDWLL 70
 
Name Accession Description Interval E-value
ATP8 MTH00025
ATP synthase F0 subunit 8; Validated
 1-70 3.25e-26

ATP synthase F0 subunit 8; Validated


Pssm-ID: 214404  Cd Length: 70  Bit Score: 90.89  E-value: 3.25e-26
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1834962045  1 MPQLETATYLTQYRWTLIALFLLFSFLVISVLPVIKTNFLIRRSVGVSWTGAPKTSDLNKGPASLWSQDK 70
Cdd:MTH00025   1 MPQLDTTTYLTQYRWTLIVLFLLLFFLVFFVLPTIKRNWLIRKSLMKKGAAFSKGLGLNKEVVFIWDWLL 70
YMF19 pfam02326
Plant ATP synthase F0; This family corresponds to subunit 8 (YMF19) of the F0 complex of plant ...
 2-43 1.39e-05

Plant ATP synthase F0; This family corresponds to subunit 8 (YMF19) of the F0 complex of plant and algae mitochondrial F-ATPases (EC:3.6.1.34).


Pssm-ID: 396760  Cd Length: 84  Bit Score: 38.92  E-value: 1.39e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 1834962045  2 PQLETATYLTQYRWTLIALFLLFSFLVISVLPVIKTNFLIRR 43
Cdd:pfam02326  1 PQLDKFTYFTQFFWLCLFFFTFYIFLLNFILPKISRILKLRK 42
 
Name Accession Description Interval E-value
ATP8 MTH00025
ATP synthase F0 subunit 8; Validated
 1-70 3.25e-26

ATP synthase F0 subunit 8; Validated


Pssm-ID: 214404  Cd Length: 70  Bit Score: 90.89  E-value: 3.25e-26
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1834962045  1 MPQLETATYLTQYRWTLIALFLLFSFLVISVLPVIKTNFLIRRSVGVSWTGAPKTSDLNKGPASLWSQDK 70
Cdd:MTH00025   1 MPQLDTTTYLTQYRWTLIVLFLLLFFLVFFVLPTIKRNWLIRKSLMKKGAAFSKGLGLNKEVVFIWDWLL 70
ATP8 MTH00169
ATP synthase F0 subunit 8; Provisional
 1-46 9.39e-14

ATP synthase F0 subunit 8; Provisional


Pssm-ID: 214446  Cd Length: 67  Bit Score: 59.22  E-value: 9.39e-14
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 1834962045  1 MPQLETATYLTQYRWTLIALFLLFSFLVISVLPVIKTNFLIRRSVG 46
Cdd:MTH00169   1 MPQLDSVTYLTQYIWTLIILFFLFSLLVNYILPKIQQQLVIRTKGV 46
YMF19 pfam02326
Plant ATP synthase F0; This family corresponds to subunit 8 (YMF19) of the F0 complex of plant ...
 2-43 1.39e-05

Plant ATP synthase F0; This family corresponds to subunit 8 (YMF19) of the F0 complex of plant and algae mitochondrial F-ATPases (EC:3.6.1.34).


Pssm-ID: 396760  Cd Length: 84  Bit Score: 38.92  E-value: 1.39e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 1834962045  2 PQLETATYLTQYRWTLIALFLLFSFLVISVLPVIKTNFLIRR 43
Cdd:pfam02326  1 PQLDKFTYFTQFFWLCLFFFTFYIFLLNFILPKISRILKLRK 42
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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