luciferase reporter [Cloning vector pMT406]
Protein Classification
lipocalin/fatty acid-binding family protein( domain architecture ID 3669)
lipocalin/fatty acid-binding family protein contains a large beta-barrel cavity that binds hydrophobic ligands
List of domain hits
| Name | Accession | Description | Interval | E-value | ||||
| lipocalin_FABP super family | cl10502 | lipocalin/cytosolic fatty acid-binding protein family; Lipocalins are diverse, mainly low ... |
7-168 | 1.50e-13 | ||||
lipocalin/cytosolic fatty acid-binding protein family; Lipocalins are diverse, mainly low molecular weight extracellular proteins that bind principally small hydrophobic ligands, and form covalent or non-covalent complexes with soluble macromolecules as well as membrane bound-receptors. They have a large beta-barrel ligand-binding cavity. Members include retinol-binding protein, retinoic acid-binding protein, complement protein C8 gamma, Can f 2, apolipoprotein D, extracellular fatty acid-binding protein, beta-lactoglobulin, oderant-binding protein, and bacterial lipocalin Blc. Lipocalins are involved in many important processes such as ligand transport, modulation of cell growth and metabolism, regulation of immune response, smell reception, tissue development and animal behavior. Cytosolic fatty acid-binding proteins also bind hydrophobic ligands in a non-covalent, reversible manner, and are involved in protection and shuttling of fatty acids within the cell, and in acquisition and removal of fatty acids from intracellular sites. The actual alignment was detected with superfamily member cd00742: Pssm-ID: 471979 Cd Length: 129 Bit Score: 63.76 E-value: 1.50e-13
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| Name | Accession | Description | Interval | E-value | ||||
| FABP | cd00742 | intracellular fatty acid-binding protein family; Members of this family are small proteins ... |
7-168 | 1.50e-13 | ||||
intracellular fatty acid-binding protein family; Members of this family are small proteins that bind hydrophobic ligands in a non-covalent, reversible manner. They protect and shuttle fatty acids within the cell and are involved in acquisition and removal of fatty acids from intracellular sites. They include cellular retinol-binding proteins (CRBPs) which participate in the cellular uptake of vitamin A in the form of free retinol, cellular retinoic acid-binding proteins (CRABPs) which participate in the metabolism of vitamin A and retinoic acid, and bind all trans retinoic acid, but not retinol, and FABPs similar to FABP3 which plays an important role in fatty acid transportation, cell growth, cell signaling, and gene transcription. Pssm-ID: 381183 Cd Length: 129 Bit Score: 63.76 E-value: 1.50e-13
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| Name | Accession | Description | Interval | E-value | ||||
| FABP | cd00742 | intracellular fatty acid-binding protein family; Members of this family are small proteins ... |
7-168 | 1.50e-13 | ||||
intracellular fatty acid-binding protein family; Members of this family are small proteins that bind hydrophobic ligands in a non-covalent, reversible manner. They protect and shuttle fatty acids within the cell and are involved in acquisition and removal of fatty acids from intracellular sites. They include cellular retinol-binding proteins (CRBPs) which participate in the cellular uptake of vitamin A in the form of free retinol, cellular retinoic acid-binding proteins (CRABPs) which participate in the metabolism of vitamin A and retinoic acid, and bind all trans retinoic acid, but not retinol, and FABPs similar to FABP3 which plays an important role in fatty acid transportation, cell growth, cell signaling, and gene transcription. Pssm-ID: 381183 Cd Length: 129 Bit Score: 63.76 E-value: 1.50e-13
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| Blast search parameters | ||||
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