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Conserved domains on  [gi|1907163452|ref|XP_036021021|]
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uncharacterized protein KIAA1671 isoform X1 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Tankyrase_bdg_C pfam15327
Tankyrase binding protein C terminal domain; This protein domain family is found at the ...
1591-1758 1.62e-70

Tankyrase binding protein C terminal domain; This protein domain family is found at the C-terminal end of the Tankyrase binding protein in eukaryotes. The precise function of this protein is still unknown. However, it is known interacts with the enzyme tankyrase, a telomeric poly(ADP-ribose) polymerase, by binding to it. Tankyrin catalyzes poly(ADP-ribose) chain formation onto proteins. More specifically, it binds to the ankyrin domain in tankyrase. The protein domain is approximately 170 amino acids in length and contains two conserved sequence motifs: FPG and LKA.


:

Pssm-ID: 464648  Cd Length: 169  Bit Score: 233.54  E-value: 1.62e-70
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452 1591 DFSFIHQTSVLDSSALKTRVQLSKRSRRRAPISHSLRRSqfsESESRSPLEEESHSTWMFKDSTEEKSPRRDE-SDEE-- 1667
Cdd:pfam15327    1 DFSFIEQTSVLDSSALKTRAQLGKKRRRRAPPSRSLRRS---EAENGGPLEEEDDSAWMFKDSTEEKSPSRQEdSDEEep 77
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452 1668 --PPRVERTPVSHPQRMPVFPGMDPAVLKAQLPKRSEVDSPGDSLSWTPQPKSPKSPFHPGVlGSRVLPPSTEKEERSEE 1745
Cdd:pfam15327   78 eqSPRSERSPVTQPQRVPLFPGMDPSALKAQLRKRNESDSPGEGPSPSQLSKSPKSPFLPGK-GPRVLPPSGEKESGSEE 156
                          170
                   ....*....|...
gi 1907163452 1746 CSPQWLKELKSKK 1758
Cdd:pfam15327  157 SSPQWLKELKSKK 169
PRK07003 super family cl35530
DNA polymerase III subunit gamma/tau;
142-406 2.17e-03

DNA polymerase III subunit gamma/tau;


The actual alignment was detected with superfamily member PRK07003:

Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 42.91  E-value: 2.17e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  142 TMVLFETTKAGPSLGKGSCEGSREASSRATQVSLLSARPEVATKPAVPARKPPVTL-----PRPTSLSQdSGSTVSQGEA 216
Cdd:PRK07003   349 TMTLLRMLAFEPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGaagaaLAPKAAAA-AAATRAEAPP 427
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  217 GRAQPLPKAHSVENPA-GQAPEAKPQPKRRPMSAvySEYSESSKPGSGGVAVTGKVPPTPPEKTWVRRPRPLSVDLTSIF 295
Cdd:PRK07003   428 AAPAPPATADRGDDAAdGDAPVPAKANARASADS--RCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPA 505
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  296 ESGDTFLKKVATEQSTAEHQGPERTSMEPRGDAEGPARMDATPQDPDADFQELA--------KRLHARREKIVLKQAETD 367
Cdd:PRK07003   506 AVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAGGAAAALDVLRNAgmrvssdrGARAAAAAKPAAAPAAAP 585
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|..
gi 1907163452  368 SPRTPRARA---TPGDDQSSQEEKAMSGQQSEKVQESPSSRP 406
Cdd:PRK07003   586 KPAAPRVAVqvpTPRARAATGDAPPNGAARAEQAAESRGAPP 627
PRK10263 super family cl35903
DNA translocase FtsK; Provisional
207-761 2.56e-03

DNA translocase FtsK; Provisional


The actual alignment was detected with superfamily member PRK10263:

Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 42.76  E-value: 2.56e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  207 SGSTVSQGEAGRAQPLPKAHSVENPAGQAPEAkpqpkrrpmSAVYSEYSESSKPGSGGVAVTG-KVPPTPPEKTWVRRPR 285
Cdd:PRK10263   295 SGNRATQPEYDEYDPLLNGAPITEPVAVAAAA---------TTATQSWAAPVEPVTQTPPVASvDVPPAQPTVAWQPVPG 365
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  286 PLSVDlTSIFESGDTFLKKVATEQSTAEHQGP-------ERTSMEPRGDAEGPARMDATPQDPDADFQELAKRLHARREK 358
Cdd:PRK10263   366 PQTGE-PVIAPAPEGYPQQSQYAQPAVQYNEPlqqpvqpQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAG 444
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  359 IVLKQAETDSPRTPRARATPGDDQSSQEEKAMSGQQSEKVQESPSSRPEraPGLTEVKGGRFDQEAYAQTERKpTGSVRK 438
Cdd:PRK10263   445 NAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPE--PVVEETKPARPPLYYFEEVEEK-RARERE 521
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  439 RLSLFGEDSAAVALAVASEPTPVTLESPSTAP--EPSRAGVNVQARIKGWTSENT----------------GEKPEVRRR 500
Cdd:PRK10263   522 QLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPpvEAAAAVSPLASGVKKATLATGaaatvaapvfslansgGPRPQVKEG 601
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  501 VPQARPLPADLTKPFSRtassneigheKCATLGGELPGERREKLKERHDLDAAPATKSPWKNGVPQKSKQTELKGTSEQE 580
Cdd:PRK10263   602 IGPQLPRPKRIRVPTRR----------ELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQT 671
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  581 NPDRcWGARSAGDAgPSEVSPEDDGSfqkvwatvfEHHVERHTVADQANRCLSTTP----PCDTADTPLVPKPRPENWPG 656
Cdd:PRK10263   672 QQQR-YGEQYQHDV-PVNAEDADAAA---------EAELARQFAQTQQQRYSGEQPaganPFSLDDFEFSPMKALLDDGP 740
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  657 KEP---PGVADRRDRSRWSSDHADPGMLGRAALADVERRQYPTPVPEMHPMEERHSRSVPRHLES------SPVSQRVQP 727
Cdd:PRK10263   741 HEPlftPIVEPVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQqpqqpvAPQPQYQQP 820
                          570       580       590
                   ....*....|....*....|....*....|....*..
gi 1907163452  728 RYDIVHASGERAHSEAVSRVPEEKAV---TLRSGRSR 761
Cdd:PRK10263   821 QQPVAPQPQYQQPQQPVAPQPQDTLLhplLMRNGDSR 857
 
Name Accession Description Interval E-value
Tankyrase_bdg_C pfam15327
Tankyrase binding protein C terminal domain; This protein domain family is found at the ...
1591-1758 1.62e-70

Tankyrase binding protein C terminal domain; This protein domain family is found at the C-terminal end of the Tankyrase binding protein in eukaryotes. The precise function of this protein is still unknown. However, it is known interacts with the enzyme tankyrase, a telomeric poly(ADP-ribose) polymerase, by binding to it. Tankyrin catalyzes poly(ADP-ribose) chain formation onto proteins. More specifically, it binds to the ankyrin domain in tankyrase. The protein domain is approximately 170 amino acids in length and contains two conserved sequence motifs: FPG and LKA.


Pssm-ID: 464648  Cd Length: 169  Bit Score: 233.54  E-value: 1.62e-70
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452 1591 DFSFIHQTSVLDSSALKTRVQLSKRSRRRAPISHSLRRSqfsESESRSPLEEESHSTWMFKDSTEEKSPRRDE-SDEE-- 1667
Cdd:pfam15327    1 DFSFIEQTSVLDSSALKTRAQLGKKRRRRAPPSRSLRRS---EAENGGPLEEEDDSAWMFKDSTEEKSPSRQEdSDEEep 77
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452 1668 --PPRVERTPVSHPQRMPVFPGMDPAVLKAQLPKRSEVDSPGDSLSWTPQPKSPKSPFHPGVlGSRVLPPSTEKEERSEE 1745
Cdd:pfam15327   78 eqSPRSERSPVTQPQRVPLFPGMDPSALKAQLRKRNESDSPGEGPSPSQLSKSPKSPFLPGK-GPRVLPPSGEKESGSEE 156
                          170
                   ....*....|...
gi 1907163452 1746 CSPQWLKELKSKK 1758
Cdd:pfam15327  157 SSPQWLKELKSKK 169
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
142-406 2.17e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 42.91  E-value: 2.17e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  142 TMVLFETTKAGPSLGKGSCEGSREASSRATQVSLLSARPEVATKPAVPARKPPVTL-----PRPTSLSQdSGSTVSQGEA 216
Cdd:PRK07003   349 TMTLLRMLAFEPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGaagaaLAPKAAAA-AAATRAEAPP 427
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  217 GRAQPLPKAHSVENPA-GQAPEAKPQPKRRPMSAvySEYSESSKPGSGGVAVTGKVPPTPPEKTWVRRPRPLSVDLTSIF 295
Cdd:PRK07003   428 AAPAPPATADRGDDAAdGDAPVPAKANARASADS--RCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPA 505
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  296 ESGDTFLKKVATEQSTAEHQGPERTSMEPRGDAEGPARMDATPQDPDADFQELA--------KRLHARREKIVLKQAETD 367
Cdd:PRK07003   506 AVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAGGAAAALDVLRNAgmrvssdrGARAAAAAKPAAAPAAAP 585
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|..
gi 1907163452  368 SPRTPRARA---TPGDDQSSQEEKAMSGQQSEKVQESPSSRP 406
Cdd:PRK07003   586 KPAAPRVAVqvpTPRARAATGDAPPNGAARAEQAAESRGAPP 627
PRK10263 PRK10263
DNA translocase FtsK; Provisional
207-761 2.56e-03

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 42.76  E-value: 2.56e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  207 SGSTVSQGEAGRAQPLPKAHSVENPAGQAPEAkpqpkrrpmSAVYSEYSESSKPGSGGVAVTG-KVPPTPPEKTWVRRPR 285
Cdd:PRK10263   295 SGNRATQPEYDEYDPLLNGAPITEPVAVAAAA---------TTATQSWAAPVEPVTQTPPVASvDVPPAQPTVAWQPVPG 365
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  286 PLSVDlTSIFESGDTFLKKVATEQSTAEHQGP-------ERTSMEPRGDAEGPARMDATPQDPDADFQELAKRLHARREK 358
Cdd:PRK10263   366 PQTGE-PVIAPAPEGYPQQSQYAQPAVQYNEPlqqpvqpQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAG 444
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  359 IVLKQAETDSPRTPRARATPGDDQSSQEEKAMSGQQSEKVQESPSSRPEraPGLTEVKGGRFDQEAYAQTERKpTGSVRK 438
Cdd:PRK10263   445 NAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPE--PVVEETKPARPPLYYFEEVEEK-RARERE 521
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  439 RLSLFGEDSAAVALAVASEPTPVTLESPSTAP--EPSRAGVNVQARIKGWTSENT----------------GEKPEVRRR 500
Cdd:PRK10263   522 QLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPpvEAAAAVSPLASGVKKATLATGaaatvaapvfslansgGPRPQVKEG 601
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  501 VPQARPLPADLTKPFSRtassneigheKCATLGGELPGERREKLKERHDLDAAPATKSPWKNGVPQKSKQTELKGTSEQE 580
Cdd:PRK10263   602 IGPQLPRPKRIRVPTRR----------ELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQT 671
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  581 NPDRcWGARSAGDAgPSEVSPEDDGSfqkvwatvfEHHVERHTVADQANRCLSTTP----PCDTADTPLVPKPRPENWPG 656
Cdd:PRK10263   672 QQQR-YGEQYQHDV-PVNAEDADAAA---------EAELARQFAQTQQQRYSGEQPaganPFSLDDFEFSPMKALLDDGP 740
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  657 KEP---PGVADRRDRSRWSSDHADPGMLGRAALADVERRQYPTPVPEMHPMEERHSRSVPRHLES------SPVSQRVQP 727
Cdd:PRK10263   741 HEPlftPIVEPVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQqpqqpvAPQPQYQQP 820
                          570       580       590
                   ....*....|....*....|....*....|....*..
gi 1907163452  728 RYDIVHASGERAHSEAVSRVPEEKAV---TLRSGRSR 761
Cdd:PRK10263   821 QQPVAPQPQYQQPQQPVAPQPQDTLLhplLMRNGDSR 857
 
Name Accession Description Interval E-value
Tankyrase_bdg_C pfam15327
Tankyrase binding protein C terminal domain; This protein domain family is found at the ...
1591-1758 1.62e-70

Tankyrase binding protein C terminal domain; This protein domain family is found at the C-terminal end of the Tankyrase binding protein in eukaryotes. The precise function of this protein is still unknown. However, it is known interacts with the enzyme tankyrase, a telomeric poly(ADP-ribose) polymerase, by binding to it. Tankyrin catalyzes poly(ADP-ribose) chain formation onto proteins. More specifically, it binds to the ankyrin domain in tankyrase. The protein domain is approximately 170 amino acids in length and contains two conserved sequence motifs: FPG and LKA.


Pssm-ID: 464648  Cd Length: 169  Bit Score: 233.54  E-value: 1.62e-70
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452 1591 DFSFIHQTSVLDSSALKTRVQLSKRSRRRAPISHSLRRSqfsESESRSPLEEESHSTWMFKDSTEEKSPRRDE-SDEE-- 1667
Cdd:pfam15327    1 DFSFIEQTSVLDSSALKTRAQLGKKRRRRAPPSRSLRRS---EAENGGPLEEEDDSAWMFKDSTEEKSPSRQEdSDEEep 77
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452 1668 --PPRVERTPVSHPQRMPVFPGMDPAVLKAQLPKRSEVDSPGDSLSWTPQPKSPKSPFHPGVlGSRVLPPSTEKEERSEE 1745
Cdd:pfam15327   78 eqSPRSERSPVTQPQRVPLFPGMDPSALKAQLRKRNESDSPGEGPSPSQLSKSPKSPFLPGK-GPRVLPPSGEKESGSEE 156
                          170
                   ....*....|...
gi 1907163452 1746 CSPQWLKELKSKK 1758
Cdd:pfam15327  157 SSPQWLKELKSKK 169
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
142-406 2.17e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 42.91  E-value: 2.17e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  142 TMVLFETTKAGPSLGKGSCEGSREASSRATQVSLLSARPEVATKPAVPARKPPVTL-----PRPTSLSQdSGSTVSQGEA 216
Cdd:PRK07003   349 TMTLLRMLAFEPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTAVTGaagaaLAPKAAAA-AAATRAEAPP 427
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  217 GRAQPLPKAHSVENPA-GQAPEAKPQPKRRPMSAvySEYSESSKPGSGGVAVTGKVPPTPPEKTWVRRPRPLSVDLTSIF 295
Cdd:PRK07003   428 AAPAPPATADRGDDAAdGDAPVPAKANARASADS--RCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPA 505
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  296 ESGDTFLKKVATEQSTAEHQGPERTSMEPRGDAEGPARMDATPQDPDADFQELA--------KRLHARREKIVLKQAETD 367
Cdd:PRK07003   506 AVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAGGAAAALDVLRNAgmrvssdrGARAAAAAKPAAAPAAAP 585
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|..
gi 1907163452  368 SPRTPRARA---TPGDDQSSQEEKAMSGQQSEKVQESPSSRP 406
Cdd:PRK07003   586 KPAAPRVAVqvpTPRARAATGDAPPNGAARAEQAAESRGAPP 627
PRK10263 PRK10263
DNA translocase FtsK; Provisional
207-761 2.56e-03

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 42.76  E-value: 2.56e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  207 SGSTVSQGEAGRAQPLPKAHSVENPAGQAPEAkpqpkrrpmSAVYSEYSESSKPGSGGVAVTG-KVPPTPPEKTWVRRPR 285
Cdd:PRK10263   295 SGNRATQPEYDEYDPLLNGAPITEPVAVAAAA---------TTATQSWAAPVEPVTQTPPVASvDVPPAQPTVAWQPVPG 365
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  286 PLSVDlTSIFESGDTFLKKVATEQSTAEHQGP-------ERTSMEPRGDAEGPARMDATPQDPDADFQELAKRLHARREK 358
Cdd:PRK10263   366 PQTGE-PVIAPAPEGYPQQSQYAQPAVQYNEPlqqpvqpQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAG 444
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  359 IVLKQAETDSPRTPRARATPGDDQSSQEEKAMSGQQSEKVQESPSSRPEraPGLTEVKGGRFDQEAYAQTERKpTGSVRK 438
Cdd:PRK10263   445 NAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPE--PVVEETKPARPPLYYFEEVEEK-RARERE 521
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  439 RLSLFGEDSAAVALAVASEPTPVTLESPSTAP--EPSRAGVNVQARIKGWTSENT----------------GEKPEVRRR 500
Cdd:PRK10263   522 QLAAWYQPIPEPVKEPEPIKSSLKAPSVAAVPpvEAAAAVSPLASGVKKATLATGaaatvaapvfslansgGPRPQVKEG 601
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  501 VPQARPLPADLTKPFSRtassneigheKCATLGGELPGERREKLKERHDLDAAPATKSPWKNGVPQKSKQTELKGTSEQE 580
Cdd:PRK10263   602 IGPQLPRPKRIRVPTRR----------ELASYGIKLPSQRAAEEKAREAQRNQYDSGDQYNDDEIDAMQQDELARQFAQT 671
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  581 NPDRcWGARSAGDAgPSEVSPEDDGSfqkvwatvfEHHVERHTVADQANRCLSTTP----PCDTADTPLVPKPRPENWPG 656
Cdd:PRK10263   672 QQQR-YGEQYQHDV-PVNAEDADAAA---------EAELARQFAQTQQQRYSGEQPaganPFSLDDFEFSPMKALLDDGP 740
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907163452  657 KEP---PGVADRRDRSRWSSDHADPGMLGRAALADVERRQYPTPVPEMHPMEERHSRSVPRHLES------SPVSQRVQP 727
Cdd:PRK10263   741 HEPlftPIVEPVQQPQQPVAPQQQYQQPQQPVAPQPQYQQPQQPVAPQPQYQQPQQPVAPQPQYQqpqqpvAPQPQYQQP 820
                          570       580       590
                   ....*....|....*....|....*....|....*..
gi 1907163452  728 RYDIVHASGERAHSEAVSRVPEEKAV---TLRSGRSR 761
Cdd:PRK10263   821 QQPVAPQPQYQQPQQPVAPQPQDTLLhplLMRNGDSR 857
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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