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Conserved domains on  [gi|1945584572|gb|QPZ50467|]
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cytochrome b (mitochondrion) [Trachypithecus hatinhensis]

Protein Classification

cytochrome b( domain architecture ID 999999)

cytochrome b is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain; contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis

CATH:  1.20.810.10
Gene Ontology:  GO:0009055|GO:0046872|GO:0022904|GO:0005743|GO:0020037
PubMed:  2509716|8329437

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
CYTB super family cl31797
cytochrome b; Provisional
 1-379 0e+00

cytochrome b; Provisional


The actual alignment was detected with superfamily member MTH00100:

Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 674.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572   1 MTPLRKSNPVMKMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIR 80
Cdd:MTH00100    1 MTNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  81 YLHANGASMFFICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNL 160
Cdd:MTH00100   81 YLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 161 VQWVWGGYSIDNPTLTRFFTLHFTLPFIIATLTTLHLLFLHETGSNNPCGILSNSDKIPFHPYYTIKDILGLIFLFLILM 240
Cdd:MTH00100  161 VEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLM 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 241 TLVLFSPDLLSDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMPVLHKSKQQSMAFRPL 320
Cdd:MTH00100  241 LLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPL 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1945584572 321 SQFLLWLLVTTLLTLTWIGSQPVNQPFIMIGQVASMLYFTTILILMPLASLIENSLLKW 379
Cdd:MTH00100  321 SQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-379 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 674.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572   1 MTPLRKSNPVMKMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIR 80
Cdd:MTH00100    1 MTNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  81 YLHANGASMFFICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNL 160
Cdd:MTH00100   81 YLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 161 VQWVWGGYSIDNPTLTRFFTLHFTLPFIIATLTTLHLLFLHETGSNNPCGILSNSDKIPFHPYYTIKDILGLIFLFLILM 240
Cdd:MTH00100  161 VEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLM 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 241 TLVLFSPDLLSDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMPVLHKSKQQSMAFRPL 320
Cdd:MTH00100  241 LLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPL 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1945584572 321 SQFLLWLLVTTLLTLTWIGSQPVNQPFIMIGQVASMLYFTTILILMPLASLIENSLLKW 379
Cdd:MTH00100  321 SQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
9-373 1.07e-114

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 339.46  E-value: 1.07e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572   9 PVMKMINHSLiDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGAS 88
Cdd:COG1290    19 PLASLVREHL-EYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  89 MFFICLFLHVGRGLYYGSF-----LLietWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQW 163
Cdd:COG1290    98 LFFAAVYLHMFRGFFYGAYkkpreLN---WIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTW 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 164 VWGGYSIDNPTLTRFFTLH-FTLPFIIATLTTLHLLFLHETGSNNPCGI----LSNSDKIPFHPYYTIKDILGLIFLFLI 238
Cdd:COG1290   175 LFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGV 254

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 239 LMTLVLFSPDLlsDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVP--NKLGGVLALLLSILILAIMPVLHKSKQQSMA 316
Cdd:COG1290   255 FALLAFFFPIN--PPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPR 332

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1945584572 317 FRPLSQFLLWLLVTTLLTLTWIGSQPVnqPFIMIGQVASMLYFTTILILMPLASLIE 373
Cdd:COG1290   333 YRPVRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 9-206 4.92e-89

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 266.93  E-value: 4.92e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572   9 PVMKMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGAS 88
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  89 MFFICLFLHVGRGLYYGSF--LLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWG 166
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1945584572 167 GYSIDNPTLTRFFTLHFTLPFIIATLTTLHLLFLHETGSN 206
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
18-204 1.15e-80

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 244.98  E-value: 1.15e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  18 LIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLH 97
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  98 VGRGLYYGSF--LLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSIDNPTL 175
Cdd:pfam00033  81 IFRGLYYGGFsyPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1945584572 176 TRFFTLHFTLPFIIATLTTLHLLFLHETG 204
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 258-291 1.84e-06

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 47.48  E-value: 1.84e-06
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1945584572 258 PANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGV 291
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGV 98
 
Name Accession Description Interval E-value
CYTB MTH00100
cytochrome b; Provisional
 1-379 0e+00

cytochrome b; Provisional


Pssm-ID: 177162 [Multi-domain]  Cd Length: 379  Bit Score: 674.05  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572   1 MTPLRKSNPVMKMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIR 80
Cdd:MTH00100    1 MTNIRKTHPLMKIINHSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  81 YLHANGASMFFICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNL 160
Cdd:MTH00100   81 YLHANGASMFFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 161 VQWVWGGYSIDNPTLTRFFTLHFTLPFIIATLTTLHLLFLHETGSNNPCGILSNSDKIPFHPYYTIKDILGLIFLFLILM 240
Cdd:MTH00100  161 VEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLM 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 241 TLVLFSPDLLSDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMPVLHKSKQQSMAFRPL 320
Cdd:MTH00100  241 LLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPL 320

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1945584572 321 SQFLLWLLVTTLLTLTWIGSQPVNQPFIMIGQVASMLYFTTILILMPLASLIENSLLKW 379
Cdd:MTH00100  321 SQCLFWLLVADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILILMPIASLIENNLLKW 379
CYTB MTH00119
cytochrome b; Provisional
 1-379 0e+00

cytochrome b; Provisional


Pssm-ID: 214425 [Multi-domain]  Cd Length: 380  Bit Score: 616.91  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572   1 MTP-LRKSNPVMKMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWII 79
Cdd:MTH00119    1 MAPnLRKSHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  80 RYLHANGASMFFICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTN 159
Cdd:MTH00119   81 RNLHANGASMFFICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQT 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 160 LVQWVWGGYSIDNPTLTRFFTLHFTLPFIIATLTTLHLLFLHETGSNNPCGILSNSDKIPFHPYYTIKDILGLIFLFLIL 239
Cdd:MTH00119  161 LVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 240 MTLVLFSPDLLSDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMPVLHKSKQQSMAFRP 319
Cdd:MTH00119  241 LTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRP 320

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 320 LSQFLLWLLVTTLLTLTWIGSQPVNQPFIMIGQVASMLYFTTILILMPLASLIENSLLKW 379
Cdd:MTH00119  321 LSQLLFWTLVANLLILTWIGSQPVEHPFIIIGQLASILYFTILLILFPLLGALENKMLNY 380
CYTB MTH00131
cytochrome b; Provisional
 1-380 0e+00

cytochrome b; Provisional


Pssm-ID: 177189 [Multi-domain]  Cd Length: 380  Bit Score: 577.37  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572   1 MTPLRKSNPVMKMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIR 80
Cdd:MTH00131    1 MASLRKTHPLLKIANDALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIR 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  81 YLHANGASMFFICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNL 160
Cdd:MTH00131   81 NLHANGASFFFICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTL 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 161 VQWVWGGYSIDNPTLTRFFTLHFTLPFIIATLTTLHLLFLHETGSNNPCGILSNSDKIPFHPYYTIKDILGLIFLFLILM 240
Cdd:MTH00131  161 VQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALT 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 241 TLVLFSPDLLSDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMPVLHKSKQQSMAFRPL 320
Cdd:MTH00131  241 SLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPL 320

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 321 SQFLLWLLVTTLLTLTWIGSQPVNQPFIMIGQVASMLYFTTILILMPLASLIENSLLKWT 380
Cdd:MTH00131  321 TQFLFWTLVADVLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVLMPLAGWLENKALEWA 380
CYTB MTH00074
cytochrome b; Provisional
 1-379 0e+00

cytochrome b; Provisional


Pssm-ID: 177145 [Multi-domain]  Cd Length: 380  Bit Score: 573.55  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572   1 MTPLRKSNPVMKMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIR 80
Cdd:MTH00074    2 AHPIRKTHPLLKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMR 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  81 YLHANGASMFFICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNL 160
Cdd:MTH00074   82 NIHANGASFFFICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTL 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 161 VQWVWGGYSIDNPTLTRFFTLHFTLPFIIATLTTLHLLFLHETGSNNPCGILSNSDKIPFHPYYTIKDILGLIFLFLILM 240
Cdd:MTH00074  162 VQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALA 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 241 TLVLFSPDLLSDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMPVLHKSKQQSMAFRPL 320
Cdd:MTH00074  242 LLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPL 321

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1945584572 321 SQFLLWLLVTTLLTLTWIGSQPVNQPFIMIGQVASMLYFTTILILMPLASLIENSLLKW 379
Cdd:MTH00074  322 TQILFWLLVANTLILTWIGGQPVEDPFIEIGQAASILYFLLFIIIIPLTGWLENKLLKW 380
CYTB MTH00191
cytochrome b; Provisional
 4-368 0e+00

cytochrome b; Provisional


Pssm-ID: 177239 [Multi-domain]  Cd Length: 365  Bit Score: 556.45  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572   4 LRKSNPVMKMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLH 83
Cdd:MTH00191    1 MRKTHPLLKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  84 ANGASMFFICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQW 163
Cdd:MTH00191   81 ANGASFFFICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQW 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 164 VWGGYSIDNPTLTRFFTLHFTLPFIIATLTTLHLLFLHETGSNNPCGILSNSDKIPFHPYYTIKDILGLIFLFLILMTLV 243
Cdd:MTH00191  161 LWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLV 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 244 LFSPDLLSDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMPVLHKSKQQSMAFRPLSQF 323
Cdd:MTH00191  241 LFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQV 320

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 1945584572 324 LLWLLVTTLLTLTWIGSQPVNQPFIMIGQVASMLYFTTILILMPL 368
Cdd:MTH00191  321 VFWLWVANFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLLFPL 365
CYTB MTH00156
cytochrome b; Provisional
 11-366 0e+00

cytochrome b; Provisional


Pssm-ID: 214440 [Multi-domain]  Cd Length: 356  Bit Score: 538.60  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  11 MKMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGASMF 90
Cdd:MTH00156    1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  91 FICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSI 170
Cdd:MTH00156   81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 171 DNPTLTRFFTLHFTLPFIIATLTTLHLLFLHETGSNNPCGILSNSDKIPFHPYYTIKDILGLIFLFLILMTLVLFSPDLL 250
Cdd:MTH00156  161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 251 SDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMPVLHKSKQQSMAFRPLSQFLLWLLVT 330
Cdd:MTH00156  241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320

                         330       340       350
                  ....*....|....*....|....*....|....*.
gi 1945584572 331 TLLTLTWIGSQPVNQPFIMIGQVASMLYFTTILILM 366
Cdd:MTH00156  321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
CYTB MTH00034
cytochrome b; Validated
 3-377 0e+00

cytochrome b; Validated


Pssm-ID: 177109 [Multi-domain]  Cd Length: 379  Bit Score: 529.28  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572   3 PLRKSNPVMKMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYL 82
Cdd:MTH00034    3 PLRKSHPLFKILNSSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNI 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  83 HANGASMFFICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQ 162
Cdd:MTH00034   83 HANGASLFFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQ 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 163 WVWGGYSIDNPTLTRFFTLHFTLPFIIATLTTLHLLFLHETGSNNPCGILSNSDKIPFHPYYTIKDILGLIFLFLILMTL 242
Cdd:MTH00034  163 WIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSL 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 243 VLFSPDLLSDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMPVLHKSKQQSMAFRPLSQ 322
Cdd:MTH00034  243 ALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQ 322

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1945584572 323 FLLWLLVTTLLTLTWIGSQPVNQPFIMIGQVASMLYFTTILILMPLASLIENSLL 377
Cdd:MTH00034  323 IAFWLLIATFFILTWIGSQPVEYPFILLGQVASVLYFSLFLFFFPLISYLENKLI 377
CYTB MTH00145
cytochrome b; Provisional
 1-377 0e+00

cytochrome b; Provisional


Pssm-ID: 177203 [Multi-domain]  Cd Length: 379  Bit Score: 527.55  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572   1 MTPLRKSNPVMKMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIR 80
Cdd:MTH00145    2 LSPLRKSHPVLKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLR 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  81 YLHANGASMFFICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNL 160
Cdd:MTH00145   82 SLHANGASFFFICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKML 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 161 VQWVWGGYSIDNPTLTRFFTLHFTLPFIIATLTTLHLLFLHETGSNNPCGILSNSDKIPFHPYYTIKDILGLIFLFLILM 240
Cdd:MTH00145  162 VEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLV 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 241 TLVLFSPDLLSDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMPVLHKSKQQSMAFRPL 320
Cdd:MTH00145  242 FLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPL 321

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1945584572 321 SQFLLWLLVTTLLTLTWIGSQPVNQPFIMIGQVASMLYFtTILILMPLASLIENSLL 377
Cdd:MTH00145  322 NQVLFWIFVGNFFILTWIGACPVEEPYETIGQVFTVLYF-LFFLILPLVQKLWDNIL 377
CYTB MTH00016
cytochrome b; Validated
 1-378 0e+00

cytochrome b; Validated


Pssm-ID: 177102 [Multi-domain]  Cd Length: 378  Bit Score: 506.52  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572   1 MTPLRKSNPVMKMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIR 80
Cdd:MTH00016    2 FSPMRKTHPLIKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLR 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  81 YLHANGASMFFICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNL 160
Cdd:MTH00016   82 NLHANGASFFFICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKML 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 161 VQWVWGGYSIDNPTLTRFFTLHFTLPFIIATLTTLHLLFLHETGSNNPCGILSNSDKIPFHPYYTIKDILGLIFLFLILM 240
Cdd:MTH00016  162 VQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLL 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 241 TLVLFSPDLLSDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMPVLHKSKQQSMAFRPL 320
Cdd:MTH00016  242 SVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPL 321

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1945584572 321 SQFLLWLLVTTLLTLTWIGSQPVNQPFIMIGQVASMLYFtTILILMPLASLIENSLLK 378
Cdd:MTH00016  322 NQILFWLLVSNFLLLTWIGGRPVEPPYEFLGQIFTVFYF-FYFMINPLLMKLWDKLLK 378
CYTB MTH00022
cytochrome b; Validated
 3-378 7.18e-165

cytochrome b; Validated


Pssm-ID: 164595 [Multi-domain]  Cd Length: 379  Bit Score: 466.49  E-value: 7.18e-165
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572   3 PLRKSNPVMKMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYL 82
Cdd:MTH00022    2 PLRKENPLLSIVNGFLVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  83 HANGASMFFICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQ 162
Cdd:MTH00022   82 HANGASLFFLCLYIHIGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQ 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 163 WVWGGYSIDNPTLTRFFTLHFTLPFIIATLTTLHLLFLHETGSNNPCGILSNSDKIPFHPYYTIKDILGLIFLFLILMTL 242
Cdd:MTH00022  162 WVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFI 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 243 VLFSPDLLSDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMPVLHKSKQQSMAFRPLSQ 322
Cdd:MTH00022  242 VYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGR 321

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1945584572 323 FLLWLLVTTLLTLTWIGSQPVNQPFIMIGQVASMLYFTTILILMPLASLIENSLLK 378
Cdd:MTH00022  322 MAFWFLIVDFILLTWIGSQVVEEPFILIGQLLSFFYFFYFLVLIPLLGELENQLLF 377
CYTB MTH00053
cytochrome b; Provisional
 4-378 6.35e-163

cytochrome b; Provisional


Pssm-ID: 164624 [Multi-domain]  Cd Length: 381  Bit Score: 461.48  E-value: 6.35e-163
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572   4 LRKSNPVMKMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLH 83
Cdd:MTH00053    5 IRKENPVISLVNSMFIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLH 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  84 ANGASMFFICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQW 163
Cdd:MTH00053   85 ANGASMFFLCVYFHIGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRW 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 164 VWGGYSIDNPTLTRFFTLHFTLPFIIATLTTLHLLFLHETGSNNPCGILSNSDKIPFHPYYTIKDILGLIFLFLILMTLV 243
Cdd:MTH00053  165 VWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIV 244

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 244 LFSPDLLSDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMPVLHKSKQQSMAFRPLSQF 323
Cdd:MTH00053  245 FLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKI 324

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1945584572 324 LLWLLVTTLLTLTWIGSQPVNQPFIMIGQVASMLYFTTILILMPLASLIENSLLK 378
Cdd:MTH00053  325 LFWFLVGDFFLLTWIGGQPVEEPYILIGQIASIFYFAYFLILMPLAGYLENKLLK 379
CYTB MTH00224
cytochrome b; Provisional
 3-378 1.83e-156

cytochrome b; Provisional


Pssm-ID: 164767 [Multi-domain]  Cd Length: 379  Bit Score: 445.13  E-value: 1.83e-156
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572   3 PLRKSNPVMKMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYL 82
Cdd:MTH00224    4 PFRTTHPAIKILNGSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  83 HANGASMFFICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQ 162
Cdd:MTH00224   84 HANGASMFFLFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVE 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 163 WVWGGYSIDNPTLTRFFTLHFTLPFIIATLTTLHLLFLHETGSNNPCGILSNSDKIPFHPYYTIKDILGLIFLFLILMTL 242
Cdd:MTH00224  164 WIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLM 243

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 243 VLFSPDLLSDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMPVLHKSKQQSMAFRPLSQ 322
Cdd:MTH00224  244 VLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQ 323

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1945584572 323 FLLWLLVTTLLTLTWIGSQPVNQPFIMIGQVASMLYFtTILILMPLASLIENSLLK 378
Cdd:MTH00224  324 LLFWLLVTSWAILTWIGGRPVEDPFEGIGQVFTILYF-SYFIISPAISKLWDDLLN 378
CYTB MTH00033
cytochrome b; Provisional
 16-374 1.15e-123

cytochrome b; Provisional


Pssm-ID: 133672 [Multi-domain]  Cd Length: 383  Bit Score: 361.95  E-value: 1.15e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  16 HSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLF 95
Cdd:MTH00033   13 NDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICVY 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  96 LHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSIDNPTL 175
Cdd:MTH00033   93 CHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCTL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 176 TRFFTLHFTLPFIIATLTTLHLLFLHETGSNNPCGILSNSDKIPFHPYYTIKDiLGLIFLFLILMTLVLFSP---DLLSD 252
Cdd:MTH00033  173 NRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKD-ILGFLILFGVFVIIGIEPrieTLLQD 251

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 253 PDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMPVLHKSKQQSMAFRPLSQFLLWLLVTTL 332
Cdd:MTH00033  252 PENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDF 331

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|...
gi 1945584572 333 LTLTWIGSQPVN-QPFIMIGQVASMLYFTTILILMPLASLIEN 374
Cdd:MTH00033  332 IILTWIGSAPAGaDPYVLIGRIATIFYFGYFLVLVPLLGYLSN 374
QcrB/PetB COG1290
Cytochrome b subunit of the bc complex [Energy production and conversion];
9-373 1.07e-114

Cytochrome b subunit of the bc complex [Energy production and conversion];


Pssm-ID: 440901 [Multi-domain]  Cd Length: 393  Bit Score: 339.46  E-value: 1.07e-114
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572   9 PVMKMINHSLiDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGAS 88
Cdd:COG1290    19 PLASLVREHL-EYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGAS 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  89 MFFICLFLHVGRGLYYGSF-----LLietWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQW 163
Cdd:COG1290    98 LFFAAVYLHMFRGFFYGAYkkpreLN---WIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTW 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 164 VWGGYSIDNPTLTRFFTLH-FTLPFIIATLTTLHLLFLHETGSNNPCGI----LSNSDKIPFHPYYTIKDILGLIFLFLI 238
Cdd:COG1290   175 LFGGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPerkkTEKVDGVPFHPYYTVKDGFGFFVFLGV 254

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 239 LMTLVLFSPDLlsDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVP--NKLGGVLALLLSILILAIMPVLHKSKQQSMA 316
Cdd:COG1290   255 FALLAFFFPIN--PPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPR 332

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1945584572 317 FRPLSQFLLWLLVTTLLTLTWIGSQPVnqPFIMIGQVASMLYFTTILILMPLASLIE 373
Cdd:COG1290   333 YRPVRTALGVAFIVFFIVLTILGANPP--IATLLGSINTVTYFAFFLIVLPILAFIE 387
CYTB MTH00086
cytochrome b; Provisional
 12-366 8.50e-101

cytochrome b; Provisional


Pssm-ID: 177151 [Multi-domain]  Cd Length: 355  Bit Score: 302.63  E-value: 8.50e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  12 KMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGASMFF 91
Cdd:MTH00086    1 NFVNSLVVTLPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  92 ICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSID 171
Cdd:MTH00086   81 IFLYLHIFKGLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVS 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 172 NPTLTRFFTLHFTLPFIIATLTTLHLLFLHETGSNNPCGILSNSDKIPFHPYYTIKDILGLIFLFLILMtLVLFSPDLLS 251
Cdd:MTH00086  161 SATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDAYNIIFWLVFII-FSLFYPFNLG 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 252 DPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMpVLHKSKQQSMAfrPLSQFLLWLLVTT 331
Cdd:MTH00086  240 DPEMFIEADPMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFF-IFVNNYTSCLN--KLNKFLVFSFIVV 316

                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1945584572 332 LLTLTWIGSQPVNQPFIMIGQVASMLYFTTILILM 366
Cdd:MTH00086  317 NVILSWLGQCLVEYPFLFLSQIFSFIYFFLILLML 351
Cytochrome_b_N cd00284
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 9-206 4.92e-89

Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.


Pssm-ID: 238176  Cd Length: 200  Bit Score: 266.93  E-value: 4.92e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572   9 PVMKMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGAS 88
Cdd:cd00284     1 PKLIEVNNSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGAS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  89 MFFICLFLHVGRGLYYGSF--LLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWG 166
Cdd:cd00284    81 MFFLMLYLHIFRGLYYGSYkkPRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWG 160

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1945584572 167 GYSIDNPTLTRFFTLHFTLPFIIATLTTLHLLFLHETGSN 206
Cdd:cd00284   161 GFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
Cytochrome_B pfam00033
Cytochrome b/b6/petB;
18-204 1.15e-80

Cytochrome b/b6/petB;


Pssm-ID: 306530  Cd Length: 189  Bit Score: 244.98  E-value: 1.15e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  18 LIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLH 97
Cdd:pfam00033   1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  98 VGRGLYYGSF--LLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSIDNPTL 175
Cdd:pfam00033  81 IFRGLYYGGFsyPRELTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160

                         170       180
                  ....*....|....*....|....*....
gi 1945584572 176 TRFFTLHFTLPFIIATLTTLHLLFLHETG 204
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
CYTB MTH00046
cytochrome b; Validated
 12-290 5.06e-77

cytochrome b; Validated


Pssm-ID: 177121 [Multi-domain]  Cd Length: 355  Bit Score: 241.81  E-value: 5.06e-77
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  12 KMINHSLIDLPTPSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGASMFF 91
Cdd:MTH00046    3 SLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVLF 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  92 ICLFLHVGRGLYYGSFLLIETWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSID 171
Cdd:MTH00046   83 ILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSVT 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 172 NPTLTRFFTLHFTLPFIIATLTTLHLLFLHETGSNNPCGILSN-SDKIPFHPYYTIKDILGLIFLFLILMTLVLFSPDLL 250
Cdd:MTH00046  163 GVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGySDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDLV 242

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|
gi 1945584572 251 SDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPNKLGG 290
Cdd:MTH00046  243 LDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGG 282
cytochrome_b_C cd00290
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ...
 207-354 1.20e-37

Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.


Pssm-ID: 238179 [Multi-domain]  Cd Length: 147  Bit Score: 132.77  E-value: 1.20e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 207 NPCGILSNSDKIPFHPYYTIKDILGLIFLFLILMTLVLFSPDLLSDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSVPN 286
Cdd:cd00290     1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1945584572 287 KLGGVLALLLSILILAIMPVLHKSKQQSMaFRPLSQFLLWLLVTTLLTLTWIGSQPVNQPFIMIGQVA 354
Cdd:cd00290    81 KLLGVLAMAASILSLFLVPFLENSNKRSQ-FRPLRPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQLF 147
PRK03735 PRK03735
cytochrome b6; Provisional
 33-190 3.37e-37

cytochrome b6; Provisional


Pssm-ID: 179639  Cd Length: 223  Bit Score: 134.07  E-value: 3.37e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  33 FGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLYYGSFLLIE- 111
Cdd:PRK03735   44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 112 -TWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSIDNPTLTRFFTLH-FTLPFII 189
Cdd:PRK03735  124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203


                  .
gi 1945584572 190 A 190
Cdd:PRK03735  204 A 204
Cytochrom_B_N_2 pfam13631
Cytochrome b(N-terminal)/b6/petB;
88-253 7.64e-36

Cytochrome b(N-terminal)/b6/petB;


Pssm-ID: 433364  Cd Length: 169  Bit Score: 128.51  E-value: 7.64e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  88 SMFFICLFLHVGRGLYYGSFLLIE--TWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVW 165
Cdd:pfam13631   1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 166 GGYSIDNPTLTRFFTLHFT-LPFIIATLTTLHLLFLHETGSNNPCGILSNSDKIPFHPYYTIKDILGLIFLFLILMTLVL 244
Cdd:pfam13631  81 GGPFPGTATIPRFYALHILlLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160


                  ....*....
gi 1945584572 245 FSPDLLSDP 253
Cdd:pfam13631 161 INPIWLGGP 169
petB CHL00070
cytochrome b6
 24-190 1.71e-33

cytochrome b6


Pssm-ID: 177009  Cd Length: 215  Bit Score: 124.06  E-value: 1.71e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572  24 PSNISTWWNFGSLLATCLTLQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWIIRYLHANGASMFFICLFLHVGRGLY 103
Cdd:CHL00070   27 PPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYL 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 104 YGSFLLIE--TWNIGIALLFMTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVQWVWGGYSIDNPTLTRFFTL 181
Cdd:CHL00070  107 TGGFKKPRelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSVSVGQSTLTRFYSL 186

                         170
                  ....*....|
gi 1945584572 182 H-FTLPFIIA 190
Cdd:CHL00070  187 HtFVLPLLTA 196
Cytochrom_B_C pfam00032
Cytochrome b(C-terminal)/b6/petD;
258-358 1.23e-29

Cytochrome b(C-terminal)/b6/petD;


Pssm-ID: 459640 [Multi-domain]  Cd Length: 101  Bit Score: 109.88  E-value: 1.23e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1945584572 258 PANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALLLSILILAIMPVLHKSKQQSMAFRPLSQFLLWLLVTTLLTLTW 337
Cdd:pfam00032   1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80

                          90       100
                  ....*....|....*....|.
gi 1945584572 338 IGSQPVNQPFIMIGQVASMLY 358
Cdd:pfam00032  81 LGKQPPTGPYTLLGQIATVYY 101
PetD COG5679
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ...
 258-291 1.08e-07

Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];


Pssm-ID: 444393 [Multi-domain]  Cd Length: 161  Bit Score: 50.95  E-value: 1.08e-07
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1945584572 258 PANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGV 291
Cdd:COG5679    66 PADPFATPLEILPEWYLYPVFQILRVVPNKLLGI 99
petD CHL00058
cytochrome b6/f complex subunit IV
 258-291 2.25e-07

cytochrome b6/f complex subunit IV


Pssm-ID: 176998  Cd Length: 160  Bit Score: 50.00  E-value: 2.25e-07
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1945584572 258 PANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGV 291
Cdd:CHL00058   65 PADPFATPLEILPEWYFFPVFQILRTVPNKLLGV 98
cytb6/f_IV TIGR01156
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ...
 258-291 1.84e-06

cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]


Pssm-ID: 130224 [Multi-domain]  Cd Length: 159  Bit Score: 47.48  E-value: 1.84e-06
                          10        20        30
                  ....*....|....*....|....*....|....
gi 1945584572 258 PANPLNTPPHIKPEWYFLFAYAILRSVPNKLGGV 291
Cdd:TIGR01156  65 PANPFATPLEILPEWYFYPVFQILRTVPNKLLGV 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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