|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
3-358 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 538.98 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 3 IKKIINPLTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASMF 82
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 83 FIFMYIHIGRGIYYSSFFFMKTWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIWGGFSV 162
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 163 DNNTLTRFFSLHFILPFILLMMVLIHIMLIHEKGSSNPLGVNLNIDKIPFHPYFTIKDILGFLLSLFLFSIIVLIFPNLL 242
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 243 IDAENFTMANPLVTPPHIQPEWYFLFAYAILRSIPNKFGGVIALMMSIMIIIILPLSMKNKFSSFYFLPFKKVLFWTLTN 322
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*.
gi 2035023177 323 IFFILTFLGACPVEPPFVSISQILTTLYFLFFFIIP 358
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
3-357 |
6.85e-102 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 305.95 E-value: 6.85e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 3 IKKIINPLTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASMF 82
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 83 FIFMYIHIGRGIYYSSFffmK-----TWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIW 157
Cdd:COG1290 100 FAAVYLHMFRGFFYGAY---KkprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLF 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 158 GGFSVDNNTLTRFFSLH-FILPFILLMMVLIHIMLIHEKGSSNPLGVNL----NIDKIPFHPYFTIKDILGFLLSLFLFS 232
Cdd:COG1290 177 GGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERkkteKVDGVPFHPYYTVKDGFGFFVFLGVFA 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 233 IIVLIFPNLliDAENFTMANPLVTPPHIQPEWYFLFAYAILRSIP--NKFGGVIALMMSIMIIIILPLSMKNKFSSFYFL 310
Cdd:COG1290 257 LLAFFFPIN--PPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYR 334
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 2035023177 311 PFKKVLFWTLTNIFFILTFLGAcpVEPPFVSISQILTTLYFLFFFII 357
Cdd:COG1290 335 PVRTALGVAFIVFFIVLTILGA--NPPIATLLGSINTVTYFAFFLIV 379
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
8-198 |
4.65e-73 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 225.33 E-value: 4.65e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 8 NPLTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASMFFIFMY 87
Cdd:cd00284 8 NSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLY 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 88 IHIGRGIYYSSFF--FMKTWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIWGGFSVDNN 165
Cdd:cd00284 88 LHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNA 167
|
170 180 190
....*....|....*....|....*....|...
gi 2035023177 166 TLTRFFSLHFILPFILLMMVLIHIMLIHEKGSS 198
Cdd:cd00284 168 TLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
10-196 |
2.18e-66 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 208.00 E-value: 2.18e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 10 LTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASMFFIFMYIH 89
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 90 IGRGIYYSSFFFM--KTWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIWGGFSVDNNTL 167
Cdd:pfam00033 81 IFRGLYYGGFSYPreLTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 2035023177 168 TRFFSLHFILPFILLMMVLIHIMLIHEKG 196
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
251-283 |
9.86e-05 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 42.09 E-value: 9.86e-05
10 20 30
....*....|....*....|....*....|...
gi 2035023177 251 ANPLVTPPHIQPEWYFLFAYAILRSIPNKFGGV 283
Cdd:TIGR01156 66 ANPFATPLEILPEWYFYPVFQILRTVPNKLLGV 98
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
3-358 |
0e+00 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 538.98 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 3 IKKIINPLTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASMF 82
Cdd:MTH00156 1 LKIINNSLIDLPTPSNISYWWNFGSLLGLCLMIQIITGLFLAMHYTADIELAFSSVIHICRDVNYGWLLRTLHANGASFF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 83 FIFMYIHIGRGIYYSSFFFMKTWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIWGGFSV 162
Cdd:MTH00156 81 FICIYLHIGRGIYYGSYKLKHTWMSGVIILFLVMATAFLGYVLPWGQMSFWGATVITNLLSAIPYLGTDLVQWIWGGFSV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 163 DNNTLTRFFSLHFILPFILLMMVLIHIMLIHEKGSSNPLGVNLNIDKIPFHPYFTIKDILGFLLSLFLFSIIVLIFPNLL 242
Cdd:MTH00156 161 DNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDLVGFIIMLMLLILLTLINPYLL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 243 IDAENFTMANPLVTPPHIQPEWYFLFAYAILRSIPNKFGGVIALMMSIMIIIILPLSMKNKFSSFYFLPFKKVLFWTLTN 322
Cdd:MTH00156 241 GDPENFIPANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSILILMILPFTNKSKFRGNQFYPINKILFWIFVN 320
|
330 340 350
....*....|....*....|....*....|....*.
gi 2035023177 323 IFFILTFLGACPVEPPFVSISQILTTLYFLFFFIIP 358
Cdd:MTH00156 321 IVILLTWIGARPVEEPYILTGQILTILYFLYFIINP 356
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
3-357 |
1.63e-173 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 487.49 E-value: 1.63e-173
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 3 IKKIINPLTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASMF 82
Cdd:MTH00119 12 LKIINNSLIDLPTPSNISAWWNFGSLLGLCLITQILTGLFLAMHYTADISLAFSSVAHICRDVQYGWLIRNLHANGASMF 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 83 FIFMYIHIGRGIYYSSFFFMKTWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIWGGFSV 162
Cdd:MTH00119 92 FICIYLHIGRGLYYGSYLYKETWNTGVILLLLLMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGQTLVEWIWGGFSV 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 163 DNNTLTRFFSLHFILPFILLMMVLIHIMLIHEKGSSNPLGVNLNIDKIPFHPYFTIKDILGFLLSLFLFSIIVLIFPNLL 242
Cdd:MTH00119 172 DNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDLLGLTLMLTLLLTLALFSPNLL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 243 IDAENFTMANPLVTPPHIQPEWYFLFAYAILRSIPNKFGGVIALMMSIMIIIILPLSMKNKFSSFYFLPFKKVLFWTLTN 322
Cdd:MTH00119 252 GDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILILFLMPFLHTSKQRSMTFRPLSQLLFWTLVA 331
|
330 340 350
....*....|....*....|....*....|....*
gi 2035023177 323 IFFILTFLGACPVEPPFVSISQILTTLYFLFFFII 357
Cdd:MTH00119 332 NLLILTWIGSQPVEHPFIIIGQLASILYFTILLIL 366
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
3-360 |
9.21e-172 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 482.87 E-value: 9.21e-172
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 3 IKKIINPLTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASMF 82
Cdd:MTH00145 12 LKVVNGSLYDLPAPVNLSIWWNFGSLLGLCLGIQILTGLFLSMHYTAHVDLAFSSVIHIMRDVNYGWLLRSLHANGASFF 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 83 FIFMYIHIGRGIYYSSFFFMKTWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIWGGFSV 162
Cdd:MTH00145 92 FICIYLHIGRGLYYGSYLMQHTWNIGVTLLLLSMGTAFLGYVLPWGQMSFWGATVITNLLSAIPYVGKMLVEWVWGGFSV 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 163 DNNTLTRFFSLHFILPFILLMMVLIHIMLIHEKGSSNPLGVNLNIDKIPFHPYFTIKDILGFLLSLFLFSIIVLIFPNLL 242
Cdd:MTH00145 172 GNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDLVGFVVLLFLLVFLVLFFPNLL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 243 IDAENFTMANPLVTPPHIQPEWYFLFAYAILRSIPNKFGGVIALMMSIMIIIILPLSMKNKFSSFYFLPFKKVLFWTLTN 322
Cdd:MTH00145 252 GDPENFIPANPMVTPVHIQPEWYFLFAYAILRSIPNKLGGVIALVMSIVILFFLPLLHVGKFRSLSFYPLNQVLFWIFVG 331
|
330 340 350
....*....|....*....|....*....|....*...
gi 2035023177 323 IFFILTFLGACPVEPPFVSISQILTTLYFLFFFIIPIV 360
Cdd:MTH00145 332 NFFILTWIGACPVEEPYETIGQVFTVLYFLFFLILPLV 369
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
3-357 |
4.88e-166 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 467.85 E-value: 4.88e-166
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 3 IKKIINPLTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASMF 82
Cdd:MTH00191 8 LKIVNGSLIDLPSPSNISYWWNFGSLLGLCLIIQILTGLFLAMHYTADISLAFSSVVHICRDVNYGWLLRNIHANGASFF 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 83 FIFMYIHIGRGIYYSSFFFMKTWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIWGGFSV 162
Cdd:MTH00191 88 FICIYLHIGRGLYYGSYLNKETWNVGVILLILSMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGDDLVQWLWGGFSV 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 163 DNNTLTRFFSLHFILPFILLMMVLIHIMLIHEKGSSNPLGVNLNIDKIPFHPYFTIKDILGFLLSLFLFSIIVLIFPNLL 242
Cdd:MTH00191 168 DNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKDILGFFILLFLLLFLVLFSPNLL 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 243 IDAENFTMANPLVTPPHIQPEWYFLFAYAILRSIPNKFGGVIALMMSIMIIIILPLSMKNKFSSFYFLPFKKVLFWTLTN 322
Cdd:MTH00191 248 GDPENFIPANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILVLFLLPLLHTSKQRSNTFRPLTQVVFWLWVA 327
|
330 340 350
....*....|....*....|....*....|....*
gi 2035023177 323 IFFILTFLGACPVEPPFVSISQILTTLYFLFFFII 357
Cdd:MTH00191 328 NFILLTWLGGQPVEDPFILLGQISSFLYFFLFLLL 362
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
3-357 |
3.77e-161 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 456.02 E-value: 3.77e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 3 IKKIIN-PLTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASM 81
Cdd:MTH00100 10 LMKIINhSFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASM 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 82 FFIFMYIHIGRGIYYSSFFFMKTWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIWGGFS 161
Cdd:MTH00100 90 FFICLFLHVGRGLYYGSYLFLETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFS 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 162 VDNNTLTRFFSLHFILPFILLMMVLIHIMLIHEKGSSNPLGVNLNIDKIPFHPYFTIKDILGFLLSLFLFSIIVLIFPNL 241
Cdd:MTH00100 170 VDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGLLLLILTLMLLVLFSPDL 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 242 LIDAENFTMANPLVTPPHIQPEWYFLFAYAILRSIPNKFGGVIALMMSIMIIIILPLSMKNKFSSFYFLPFKKVLFWTLT 321
Cdd:MTH00100 250 LGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLV 329
|
330 340 350
....*....|....*....|....*....|....*.
gi 2035023177 322 NIFFILTFLGACPVEPPFVSISQILTTLYFLFFFII 357
Cdd:MTH00100 330 ADLLTLTWIGGQPVEHPFIIIGQLASILYFLIILIL 365
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
5-357 |
4.75e-161 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 456.04 E-value: 4.75e-161
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 5 KIIN-PLTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASMFF 83
Cdd:MTH00131 12 KIANdALVDLPAPSNISVWWNFGSLLGLCLITQILTGLFLAMHYTSDISTAFSSVAHICRDVNYGWLIRNLHANGASFFF 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 84 IFMYIHIGRGIYYSSFFFMKTWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIWGGFSVD 163
Cdd:MTH00131 92 ICIYLHIGRGLYYGSYLYKETWNIGVVLLLLVMMTAFVGYVLPWGQMSFWGATVITNLLSAVPYVGNTLVQWIWGGFSVD 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 164 NNTLTRFFSLHFILPFILLMMVLIHIMLIHEKGSSNPLGVNLNIDKIPFHPYFTIKDILGFLLSLFLFSIIVLIFPNLLI 243
Cdd:MTH00131 172 NATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDLLGFAILLLALTSLALFSPNLLG 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 244 DAENFTMANPLVTPPHIQPEWYFLFAYAILRSIPNKFGGVIALMMSIMIIIILPLSMKNKFSSFYFLPFKKVLFWTLTNI 323
Cdd:MTH00131 252 DPDNFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPILHTSKQRGLTFRPLTQFLFWTLVAD 331
|
330 340 350
....*....|....*....|....*....|....
gi 2035023177 324 FFILTFLGACPVEPPFVSISQILTTLYFLFFFII 357
Cdd:MTH00131 332 VLILTWIGGMPVEHPFIIIGQVASVLYFSLFLVL 365
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
3-357 |
7.30e-158 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 447.98 E-value: 7.30e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 3 IKKIINPLTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASMF 82
Cdd:MTH00074 12 LKIINNSFIDLPTPSNLSSLWNFGSLLGVCLIAQIITGLFLAMHYTADTSSAFSSVAHICRDVNYGWLMRNIHANGASFF 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 83 FIFMYIHIGRGIYYSSFFFMKTWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIWGGFSV 162
Cdd:MTH00074 92 FICIYLHIGRGLYYGSYMYKETWNIGVILLFLVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYMGDTLVQWIWGGFSV 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 163 DNNTLTRFFSLHFILPFILLMMVLIHIMLIHEKGSSNPLGVNLNIDKIPFHPYFTIKDILGFLLSLFLFSIIVLIFPNLL 242
Cdd:MTH00074 172 DKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDLLGFLIMLTALALLSLFSPNLL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 243 IDAENFTMANPLVTPPHIQPEWYFLFAYAILRSIPNKFGGVIALMMSIMIIIILPLSMKNKFSSFYFLPFKKVLFWTLTN 322
Cdd:MTH00074 252 GDPDNFTPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVLALLASILILMLIPMLHTSKQRSLMFRPLTQILFWLLVA 331
|
330 340 350
....*....|....*....|....*....|....*
gi 2035023177 323 IFFILTFLGACPVEPPFVSISQILTTLYFLFFFII 357
Cdd:MTH00074 332 NTLILTWIGGQPVEDPFIEIGQAASILYFLLFIII 366
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
3-360 |
1.67e-157 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 446.82 E-value: 1.67e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 3 IKKIINPLTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASMF 82
Cdd:MTH00016 12 IKIMNGSLVDLPAPSNLSIWWNFGSLLGLCLVIQILTGLFLSMHYTPHIDLAFSSVAHISRDVNYGWLLRNLHANGASFF 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 83 FIFMYIHIGRGIYYSSFFFMKTWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIWGGFSV 162
Cdd:MTH00016 92 FICLYLHIGRGIYYGSYFLMETWNIGVILLLLTMATAFLGYVLPWGQMSFWGATVITNLLSAIPYIGKMLVQWLWGGFSV 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 163 DNNTLTRFFSLHFILPFILLMMVLIHIMLIHEKGSSNPLGVNLNIDKIPFHPYFTIKDILGFLLSLFLFSIIVLIFPNLL 242
Cdd:MTH00016 172 DNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDIVGFIVMLFLLLSVVLLWPNIL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 243 IDAENFTMANPLVTPPHIQPEWYFLFAYAILRSIPNKFGGVIALMMSIMIIIILPLSMKNKFSSFYFLPFKKVLFWTLTN 322
Cdd:MTH00016 252 GDPENFIPANPLVTPTHIKPEWYFLWAYAILRSIPNKLGGVVAMFASILILFFLPFIFKQKFRGLSFYPLNQILFWLLVS 331
|
330 340 350
....*....|....*....|....*....|....*...
gi 2035023177 323 IFFILTFLGACPVEPPFVSISQILTTLYFLFFFIIPIV 360
Cdd:MTH00016 332 NFLLLTWIGGRPVEPPYEFLGQIFTVFYFFYFMINPLL 369
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
3-360 |
1.50e-147 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 421.42 E-value: 1.50e-147
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 3 IKKIIN-PLTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASM 81
Cdd:MTH00034 10 LFKILNsSLIDLPSPSNLSIWWNFGSLLGLCLIIQIITGIFLAMHYTADISLAFSSVSHICRDVNYGWLLRNIHANGASL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 82 FFIFMYIHIGRGIYYSSFFFMKTWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIWGGFS 161
Cdd:MTH00034 90 FFICLYFHIGRGLYYGSYVNIETWNIGVILFLLTMLTAFVGYVLPWGQMSFWAATVITNLVSAVPYIGTDIVQWIWGGFS 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 162 VDNNTLTRFFSLHFILPFILLMMVLIHIMLIHEKGSSNPLGVNLNIDKIPFHPYFTIKDILGFLLSLFLFSIIVLIFPNL 241
Cdd:MTH00034 170 VDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDLVGFLILFAALSSLALLFPTA 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 242 LIDAENFTMANPLVTPPHIQPEWYFLFAYAILRSIPNKFGGVIALMMSIMIIIILPLSMKNKFSSFYFLPFKKVLFWTLT 321
Cdd:MTH00034 250 LNDPENFIPANPLVTPPHIQPEWYFLFAYAILRSIPNKLGGVIALVAAILVLFLVPILHTSNNQSSTFRPLSQIAFWLLI 329
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 2035023177 322 NIFFILTFLGACPVEPPFVSISQILTTLYF-LFFFIIPIV 360
Cdd:MTH00034 330 ATFFILTWIGSQPVEYPFILLGQVASVLYFsLFLFFFPLI 369
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
5-360 |
6.75e-138 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 396.98 E-value: 6.75e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 5 KIIN-PLTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASMFF 83
Cdd:MTH00224 13 KILNgSLIDLPAPNNISIWWNYGSLLGLCLVIQVLTGLFLSMHYAPNIEMAFSSVAHISRDVNYGWLLRSIHANGASMFF 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 84 IFMYIHIGRGIYYSSFFFMKTWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIWGGFSVD 163
Cdd:MTH00224 93 LFIYLHVGRGLYYGSFNLSETWNIGVILFILTMATAFLGYVLPWGQMSFWGATVITNLFSAIPYIGKDLVEWIWGGFAVD 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 164 NNTLTRFFSLHFILPFILLMMVLIHIMLIHEKGSSNPLGVNLNIDKIPFHPYFTIKDILGFLLSLFLFSIIVLIFPNLLI 243
Cdd:MTH00224 173 NATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKDALGYLIAILLLSLMVLFEPNLFT 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 244 DAENFTMANPLVTPPHIQPEWYFLFAYAILRSIPNKFGGVIALMMSIMIIIILPLSMKNKFSSFYFLPFKKVLFWTLTNI 323
Cdd:MTH00224 253 DPENFLMANPLVTPIHIKPEWYFLWMYAILRSIPNKLGGVVALFAAILILFILPLTSVMNKRSLPFYPLNQLLFWLLVTS 332
|
330 340 350
....*....|....*....|....*....|....*..
gi 2035023177 324 FFILTFLGACPVEPPFVSISQILTTLYFLFFFIIPIV 360
Cdd:MTH00224 333 WAILTWIGGRPVEDPFEGIGQVFTILYFSYFIISPAI 369
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
10-357 |
1.63e-137 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 395.99 E-value: 1.63e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 10 LTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASMFFIFMYIH 89
Cdd:MTH00022 17 LVDLPSPSNISYLWNFGSLLGLCLVIQIITGCFLSMHYCSDVSLAFASVGHIMRDVNYGFLLRYLHANGASLFFLCLYIH 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 90 IGRGIYYSSFFFMKTWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIWGGFSVDNNTLTR 169
Cdd:MTH00022 97 IGRGLYYGGYLKFHVWNVGVVIFLLTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDIVQWVWGGFSVSNATLNR 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 170 FFSLHFILPFILLMMVLIHIMLIHEKGSSNPLGVNLNIDKIPFHPYFTIKDILGFLLSLFLFSIIVLIFPNLLIDAENFT 249
Cdd:MTH00022 177 FFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKDWYGIVVLFFLLSFIVYFAPNLLGDPENFI 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 250 MANPLVTPPHIQPEWYFLFAYAILRSIPNKFGGVIALMMSIMIIIILPLSMKNKFSSFYFLPFKKVLFWTLTNIFFILTF 329
Cdd:MTH00022 257 QANSLVTPVHIQPEWYFLFAYAILRSIPNKLGGVVAMFFSILILFFLPLLHTSWLRGLTFRPLGRMAFWFLIVDFILLTW 336
|
330 340
....*....|....*....|....*...
gi 2035023177 330 LGACPVEPPFVSISQILTTLYFLFFFII 357
Cdd:MTH00022 337 IGSQVVEEPFILIGQLLSFFYFFYFLVL 364
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
10-360 |
8.93e-133 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 384.06 E-value: 8.93e-133
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 10 LTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASMFFIFMYIH 89
Cdd:MTH00053 19 FIDLPSPSNISYLWNFGSLLGFCLIIQIITGIFLAMHYCADVNLAFSSVAHITRDVNYGFILRYLHANGASMFFLCVYFH 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 90 IGRGIYYSSFFFMKTWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIWGGFSVDNNTLTR 169
Cdd:MTH00053 99 IGRGIYYGSYTKIIVWNVGVLIFLLMILTAFIGYVLPWGQMSFWAATVITNLLSAIPYVGDDIVRWVWGGFSVSNATLNR 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 170 FFSLHFILPFILLMMVLIHIMLIHEKGSSNPLGVNLNIDKIPFHPYFTIKDILGFLLSLFLFSIIVLIFPNLLIDAENFT 249
Cdd:MTH00053 179 FYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKDLYGAVILLIILSIIVFLFPYSLGDAENFK 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 250 MANPLVTPPHIQPEWYFLFAYAILRSIPNKFGGVIALMMSIMIIIILPLSMKNKFSSFYFLPFKKVLFWTLTNIFFILTF 329
Cdd:MTH00053 259 QANPLVTPVHIKPEWYFLFAYAILRSIPNKLGGVVALVFSILVLFFLPYLHKSRFRGLSFRPLSKILFWFLVGDFFLLTW 338
|
330 340 350
....*....|....*....|....*....|..
gi 2035023177 330 LGACPVEPPFVSISQILTTLYFLFFFII-PIV 360
Cdd:MTH00053 339 IGGQPVEEPYILIGQIASIFYFAYFLILmPLA 370
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
7-357 |
6.57e-107 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 318.42 E-value: 6.57e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 7 INPLTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASMFFIFM 86
Cdd:MTH00033 12 VNDIIDLPTPSNISYWWNFGSLLCLCLGIQILTGVLLAMHYRSDVSLAFSSVAHIVRDVNYGWILRYVHANGASLFFICV 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 87 YIHIGRGIYYSSFFFMKTWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIWGGFSVDNNT 166
Cdd:MTH00033 92 YCHIGRGLYYGGYSRVLTWIVGVLIFFIMMLTAFIGYVLPWGQMSFWAATVITNLVSAIPSVGGSIVEWIWGGFSVSNCT 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 167 LTRFFSLHFILPFILLMMVLIHIMLIHEKGSSNPLGVNLNIDKIPFHPYFTIKDILGFLLSLFLFSIIVL--IFPNLLID 244
Cdd:MTH00033 172 LNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKDILGFLILFGVFVIIGIepRIETLLQD 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 245 AENFTMANPLVTPPHIQPEWYFLFAYAILRSIPNKFGGVIALMMSIMIIIILPLSMKNKFSSFYFLPFKKVLFWTLTNIF 324
Cdd:MTH00033 252 PENFIQANPLVTPVHIQPEWYFLFAYAILRSIPNKLGGVLALFASILVLLLMPILDRSKIRSLTFNPTGKFFFWFIVGDF 331
|
330 340 350
....*....|....*....|....*....|....
gi 2035023177 325 FILTFLGACPV-EPPFVSISQILTTLYFLFFFII 357
Cdd:MTH00033 332 IILTWIGSAPAgADPYVLIGRIATIFYFGYFLVL 365
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
3-357 |
6.85e-102 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 305.95 E-value: 6.85e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 3 IKKIINPLTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASMF 82
Cdd:COG1290 20 LASLVREHLEYPFPKNWNFSYWFGELALYSFVIQILTGIFLTMYYKPSASEAFASVEYIMRDVPGGWLIRYMHHWGASLF 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 83 FIFMYIHIGRGIYYSSFffmK-----TWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIW 157
Cdd:COG1290 100 FAAVYLHMFRGFFYGAY---KkprelNWIIGVLLLLLTMAEAFTGYSLPWDQLSYWGARVITGLFGAIPVIGTWLVTWLF 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 158 GGFSVDNNTLTRFFSLH-FILPFILLMMVLIHIMLIHEKGSSNPLGVNL----NIDKIPFHPYFTIKDILGFLLSLFLFS 232
Cdd:COG1290 177 GGEFPGDATLNRFFALHvLLLPALLLALVVLHLWLLHRHGHNNPPGPERkkteKVDGVPFHPYYTVKDGFGFFVFLGVFA 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 233 IIVLIFPNLliDAENFTMANPLVTPPHIQPEWYFLFAYAILRSIP--NKFGGVIALMMSIMIIIILPLSMKNKFSSFYFL 310
Cdd:COG1290 257 LLAFFFPIN--PPPNYGPANPLATPAHIQPDWYFLPFYGILRAIPgsAKLGGVIAMGLAILVLFLLPFLDRSPVRSPRYR 334
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 2035023177 311 PFKKVLFWTLTNIFFILTFLGAcpVEPPFVSISQILTTLYFLFFFII 357
Cdd:COG1290 335 PVRTALGVAFIVFFIVLTILGA--NPPIATLLGSINTVTYFAFFLIV 379
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
13-357 |
5.25e-99 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 297.24 E-value: 5.25e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 13 LPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASMFFIFMYIHIGR 92
Cdd:MTH00086 10 LPSSKSLSYWWNFGSMLGMVLVFQILTGTFLAFYYTADSSMAFSSVQYIMYEVNFGWLFRIFHFNGASLFFIFLYLHIFK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 93 GIYYSSFFFMKTWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIWGGFSVDNNTLTRFFS 172
Cdd:MTH00086 90 GLFMMSYRLKKVWISGLTIYLLVMMEAFMGYVLVWAQMSFWAAVVITSLLSVIPIWGPSIVMWIWGGFGVSSATLKFFFV 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 173 LHFILPFILLMMVLIHIMLIHEKGSSNPLGVNLNIDKIPFHPYFTIKDiLGFLLSLFLFSIIVLIFPNLLIDAENFTMAN 252
Cdd:MTH00086 170 LHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKD-AYNIIFWLVFIIFSLFYPFNLGDPEMFIEAD 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 253 PLVTPPHIQPEWYFLFAYAILRSIPNKFGGVIALMMSIMIIIILPLsMKNKFSSFYFLpfKKVLFWTLTNIFFILTFLGA 332
Cdd:MTH00086 249 PMMSPVHIVPEWYFLFAYAILRAIPNKVLGVIALLMSIVVFYFFIF-VNNYTSCLNKL--NKFLVFSFIVVNVILSWLGQ 325
|
330 340
....*....|....*....|....*
gi 2035023177 333 CPVEPPFVSISQILTTLYFLFFFII 357
Cdd:MTH00086 326 CLVEYPFLFLSQIFSFIYFFLILLM 350
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
3-356 |
2.86e-81 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 251.83 E-value: 2.86e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 3 IKKIINPLTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASMF 82
Cdd:MTH00046 2 ISLIRRNLIDLPTNYSLNYYWCSGFVLSVFMVIQVLTGVLLSLLYVADSLCSFFCVMSLSNDSFFTWCVRYWHIWGVNVL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 83 FIFMYIHIGRGIYYSSFFFMKTWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIWGGFSV 162
Cdd:MTH00046 82 FILLFIHMGRALYYSSYSKKGVWNVGFILYLLVMVEAFLGYILPWHQMSYWAATVLTSIVDSVPIVGSLVYKYIVGGFSV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 163 DNNTLTRFFSLHFILPFILLMMVLIHIMLIHEKGSSNPLGVNLNI-DKIPFHPYFTIKDILGFLLSLFLFSIIVLIFPNL 241
Cdd:MTH00046 162 TGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKDLFLFMVVCSLLVFWLFVSPDL 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 242 LIDAENFTMANPLVTPPHIQPEWYFLFAYAILRSIPNKFGGVIALMMSIMIIIILPlsmkNKFSSFYFLpFKKVLFWTLT 321
Cdd:MTH00046 242 VLDIEAYLEADPLVTPVSIKPEWYFLAFYAMLRSINSKIGGLVLVLSFLFFLWVPT----FNGSSVYSV-WRQVNFWLIV 316
|
330 340 350
....*....|....*....|....*....|....*
gi 2035023177 322 NIFFILTFLGACPVEPPFVSISQILTTLYFLFFFI 356
Cdd:MTH00046 317 SLFFSLSYLGGCHPEYPYLLISQLFSVLMVLLLFI 351
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
8-198 |
4.65e-73 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 225.33 E-value: 4.65e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 8 NPLTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASMFFIFMY 87
Cdd:cd00284 8 NSLIDLPPPSNISYWWNFGSLLGTCLVIQILTGVFLAMHYTPDVTLAFSSVQYIMRDVNFGWLIRSLHANGASMFFLMLY 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 88 IHIGRGIYYSSFF--FMKTWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIWGGFSVDNN 165
Cdd:cd00284 88 LHIFRGLYYGSYKkpRELTWVIGVILLLLTMATAFMGYVLPWGQMSYWGATVITNLFSAIPVIGITLVEWLWGGFSVDNA 167
|
170 180 190
....*....|....*....|....*....|...
gi 2035023177 166 TLTRFFSLHFILPFILLMMVLIHIMLIHEKGSS 198
Cdd:cd00284 168 TLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
10-196 |
2.18e-66 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 208.00 E-value: 2.18e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 10 LTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASMFFIFMYIH 89
Cdd:pfam00033 1 VVSLPVPSNLSIWYNFGSLLGLCLAVQILTGVFLAFYYTPDVTLAFLSVQYIMRDVNFGWLIRSVHANGASMFFLMLYLH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 90 IGRGIYYSSFFFM--KTWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIWGGFSVDNNTL 167
Cdd:pfam00033 81 IFRGLYYGGFSYPreLTWVIGVILLVLTMSTAFIGYVLPWGQMSYWGATVITNLLSAIPVIGDTLVEWIWGSFSVDQATL 160
|
170 180
....*....|....*....|....*....
gi 2035023177 168 TRFFSLHFILPFILLMMVLIHIMLIHEKG 196
Cdd:pfam00033 161 TRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
25-201 |
7.87e-34 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 124.82 E-value: 7.87e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 25 MGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGASMFFIFMYIHIGRGIYYSSFFFMK- 103
Cdd:PRK03735 44 FGGLTFFCFVIQILSGMFLTMYYVPDIKNAYESVYYLQNEVAFGWIVRGMHHWGASLVIVMMFLHTLRVFFTGGYKKPRe 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 104 -TWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIWGGFSVDNNTLTRFFSLH-FILPFIL 181
Cdd:PRK03735 124 lNWVVGVLIFFVTVGLGFTGYLLPWDQKAYFATKVGSQIAEAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWAL 203
|
170 180
....*....|....*....|
gi 2035023177 182 LMMVLIHIMLIHEKGSSNPL 201
Cdd:PRK03735 204 AVLMLAHFLMIRKQGISGPL 223
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
80-245 |
3.41e-33 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 121.19 E-value: 3.41e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 80 SMFFIFMYIHIGRGIYYSSFFFMK--TWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWIW 157
Cdd:pfam13631 1 YIFIAAIYVHMLRIFFTGAYRKPRelNWIIGVLLLLLTLGEGFTGYSLPDDLLSGTGLRIGLGILSSIPVVGTWLVWLLF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 158 GGFSVDNNTLTRFFSLHF-ILPFILLMMVLIHIMLIHEKGSSNPLGVNLNIDKIPFHPYFTIKDILGFLLSLFLFSIIVL 236
Cdd:pfam13631 81 GGPFPGTATIPRFYALHIlLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVKMLLFFLITVALLIGLAQ 160
|
....*....
gi 2035023177 237 IFPNLLIDA 245
Cdd:pfam13631 161 INPIWLGGP 169
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
199-345 |
1.35e-30 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 113.51 E-value: 1.35e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 199 NPLGVNLNIDKIPFHPYFTIKDILGFLLSLFLFSIIVLIFPNLLIDAENFTMANPLVTPPHIQPEWYFLFAYAILRSIPN 278
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPVYAILRAIPN 80
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2035023177 279 KFGGVIALMMSIMIIIIL-PLSMKNKFSSFYFLpfKKVLFWTLTNIFFILTFLGACPVEPPFVSISQI 345
Cdd:cd00290 81 KLLGVLAMAASILSLFLVpFLENSNKRSQFRPL--RPTAFWVFLAGTLVLGWLGIQPVEYPFSLILQL 146
|
|
| petB |
CHL00070 |
cytochrome b6 |
1-201 |
2.01e-30 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 115.20 E-value: 2.01e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 1 MNIKKIINPLTNLPTPSNISLLWNMGSLLGMCLIIQILSGLFLAMNFSSDISTAFNMMSHINRDVNNGWLIRSIHSNGAS 80
Cdd:CHL00070 12 LEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEVNFGWLIRSVHRWSAS 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 81 MFFIFMYIHIGRgiYYSSFFFMK----TWLSGILIILILMATAFLGYVLPWGQMSFWGATVITNLFSAIPYFGTTLTFWI 156
Cdd:CHL00070 92 MMVLMMILHVFR--VYLTGGFKKprelTWVTGVVLAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELL 169
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 2035023177 157 WGGFSVDNNTLTRFFSLH-FILPFILLMMVLIHIMLIHEKGSSNPL 201
Cdd:CHL00070 170 RGSVSVGQSTLTRFYSLHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
250-350 |
3.66e-27 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 102.94 E-value: 3.66e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2035023177 250 MANPLVTPPHIQPEWYFLFAYAILRSIPNKFGGVIALMMSIMIIIILPLSMKNKFSSFYFLPFKKVLFWTLTNIFFILTF 329
Cdd:pfam00032 1 PANPLVTPAHIVPEWYFLPFYAILRSIPSKLGGVIAMGAAILILFLLPWLDRSPVRSIRYRPLFKIFFWLFVVDFVVLGW 80
|
90 100
....*....|....*....|.
gi 2035023177 330 LGACPVEPPFVSISQILTTLY 350
Cdd:pfam00032 81 LGKQPPTGPYTLLGQIATVYY 101
|
|
| PetD |
COG5679 |
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion]; ... |
251-283 |
1.67e-05 |
|
Cytochrome b6f complex subunit IV, PetD, 17 kd cytochrome b [Energy production and conversion];
Pssm-ID: 444393 [Multi-domain] Cd Length: 161 Bit Score: 44.40 E-value: 1.67e-05
10 20 30
....*....|....*....|....*....|...
gi 2035023177 251 ANPLVTPPHIQPEWYFLFAYAILRSIPNKFGGV 283
Cdd:COG5679 67 ADPFATPLEILPEWYLYPVFQILRVVPNKLLGI 99
|
|
| petD |
CHL00058 |
cytochrome b6/f complex subunit IV |
251-283 |
1.80e-05 |
|
cytochrome b6/f complex subunit IV
Pssm-ID: 176998 Cd Length: 160 Bit Score: 44.61 E-value: 1.80e-05
10 20 30
....*....|....*....|....*....|...
gi 2035023177 251 ANPLVTPPHIQPEWYFLFAYAILRSIPNKFGGV 283
Cdd:CHL00058 66 ADPFATPLEILPEWYFFPVFQILRTVPNKLLGV 98
|
|
| cytb6/f_IV |
TIGR01156 |
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f ... |
251-283 |
9.86e-05 |
|
cytochrome b6/f complex subunit IV; This model describes the subunit IV of the cytochrome b6/f complex. The cyt b6/f complex is central to the functions of the oxygenic phosynthetic electron transport in cyanobacteria and its equivalents in algae and higher plants. Energetically, on the redox scale the cytb6/f complex is placed below the other components - Q(A); Q(B) of the photosystem II in the Z-scheme, along the pathway of the electron transport. The complex is made of the following subunits: cytochrome f; cytochrome b6; Rieske 2Fe-2S; and subunits IV; V; VI; VII. Subunit IV is one of the principal subunits for the binding of the redox prosthetic groups. Each monomer of the complex contains a molecule of chlorophyll a and beta-carotene. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis]
Pssm-ID: 130224 [Multi-domain] Cd Length: 159 Bit Score: 42.09 E-value: 9.86e-05
10 20 30
....*....|....*....|....*....|...
gi 2035023177 251 ANPLVTPPHIQPEWYFLFAYAILRSIPNKFGGV 283
Cdd:TIGR01156 66 ANPFATPLEILPEWYFYPVFQILRTVPNKLLGV 98
|
|
| |
