NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|208431820|ref|NP_598878|]
View 

extracellular tyrosine-protein kinase PKDCC isoform 1 precursor [Mus musculus]

Protein Classification

protein kinase family protein( domain architecture ID 229378)

protein kinase family protein may catalyze the transfer of the gamma-phosphoryl group from ATP to substrates such as serine/threonine and/or tyrosine residues on proteins, or may be a pseudokinase

CATH:  1.10.510.10
PubMed:  16244704

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
PKc_like super family cl21453
Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the ...
144-295 1.18e-08

Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases, and choline kinases. These proteins catalyze the transfer of the gamma-phosphoryl group from ATP to hydroxyl groups in specific substrates such as serine, threonine, or tyrosine residues of proteins.


The actual alignment was detected with superfamily member cd14131:

Pssm-ID: 473864 [Multi-domain]  Cd Length: 271  Bit Score: 56.07  E-value: 1.18e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820 144 VGSGYTKAVYRVRLPGGAAVALKAVDFSGHDlgscvrefgarrgcyRLAAHKLLKEMVLLERLRH-PNVLQLYGYCYQDS 222
Cdd:cd14131    9 LGKGGSSKVYKVLNPKKKIYALKRVDLEGAD---------------EQTLQSYKNEIELLKKLKGsDRIIQLYDYEVTDE 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820 223 egiPDTLTTITELGApVEMIQLLQTSWE----DRFRI-----CLSLGRLLHH--LAHSplgsvtllDFRPRQFVLVNGEL 291
Cdd:cd14131   74 ---DDYLYMVMECGE-IDLATILKKKRPkpidPNFIRyywkqMLEAVHTIHEegIVHS--------DLKPANFLLVKGRL 141

                 ....
gi 208431820 292 KVTD 295
Cdd:cd14131  142 KLID 145
 
Name Accession Description Interval E-value
PKc_Mps1 cd14131
Catalytic domain of the Dual-specificity Mitotic checkpoint protein kinase, Monopolar spindle ...
144-295 1.18e-08

Catalytic domain of the Dual-specificity Mitotic checkpoint protein kinase, Monopolar spindle 1 (also called TTK); Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. TTK/Mps1 is a spindle checkpoint kinase that was first discovered due to its necessity in centrosome duplication in budding yeast. It was later found to function in the spindle assembly checkpoint, which monitors the proper attachment of chromosomes to the mitotic spindle. In yeast, substrates of Mps1 include the spindle pole body components Spc98p, Spc110p, and Spc42p. The TTK/Mps1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271033 [Multi-domain]  Cd Length: 271  Bit Score: 56.07  E-value: 1.18e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820 144 VGSGYTKAVYRVRLPGGAAVALKAVDFSGHDlgscvrefgarrgcyRLAAHKLLKEMVLLERLRH-PNVLQLYGYCYQDS 222
Cdd:cd14131    9 LGKGGSSKVYKVLNPKKKIYALKRVDLEGAD---------------EQTLQSYKNEIELLKKLKGsDRIIQLYDYEVTDE 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820 223 egiPDTLTTITELGApVEMIQLLQTSWE----DRFRI-----CLSLGRLLHH--LAHSplgsvtllDFRPRQFVLVNGEL 291
Cdd:cd14131   74 ---DDYLYMVMECGE-IDLATILKKKRPkpidPNFIRyywkqMLEAVHTIHEegIVHS--------DLKPANFLLVKGRL 141

                 ....
gi 208431820 292 KVTD 295
Cdd:cd14131  142 KLID 145
PIP49_C pfam12260
Protein-kinase domain of FAM69; This is the C-terminal region of a family of FAM69 proteins ...
200-370 1.87e-08

Protein-kinase domain of FAM69; This is the C-terminal region of a family of FAM69 proteins from Metazoa and Viridiplantae that are active protein-kinases. The family members have a short transmembrane helix close to the N-terminus, and thereafter are highly enriched with cysteines. FAM69 proteins are localized to the endoplasmic reticulum. Many members also have a short EF-hand, calcium-binding, domain just upstream of the kinase domain. The exact function of the more N-terminal family is uncertain.


Pssm-ID: 463512  Cd Length: 188  Bit Score: 54.22  E-value: 1.87e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820  200 MVLLERLRHpnVLQLYGYC--YQDSEGIPDTLTtiteLGAPVEMIQLLQTSWEDRFRICLSLGRLLHHLAHSPLGSVTLL 277
Cdd:pfam12260  13 LQIFQDREP--FPKYLGSCgrLYVVEYVGAGPL----LGISRRPLDWFSPPWPRRAKIALQLLELVEDLFNGDPGFLYMC 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820  278 DFRPRQF-VLVNGELKVTDLD--------DARVEETPCTSSADCTLeFPARNFSLPCSAQgwCEGMNEKRNLYNAYRFFF 348
Cdd:pfam12260  87 DVSLENFgVTNDGRLKLVDLDnvfpedklRRKISEQKCEKDEDCDF-FDCLSFCDLEKDR--CSSEVVNPNLQKVCQKLL 163
                         170       180
                  ....*....|....*....|..
gi 208431820  349 TYLLpHSAPPSLRPLLDSIVNA 370
Cdd:pfam12260 164 DYLL-RGPPSPLPEELEKLLQE 184
TyrKc smart00219
Tyrosine kinase, catalytic domain; Phosphotransferases. Tyrosine-specific kinase subfamily.
195-221 9.21e-04

Tyrosine kinase, catalytic domain; Phosphotransferases. Tyrosine-specific kinase subfamily.


Pssm-ID: 197581 [Multi-domain]  Cd Length: 257  Bit Score: 40.98  E-value: 9.21e-04
                           10        20
                   ....*....|....*....|....*..
gi 208431820   195 KLLKEMVLLERLRHPNVLQLYGYCYQD 221
Cdd:smart00219  47 EFLREARIMRKLDHPNVVKLLGVCTEE 73
 
Name Accession Description Interval E-value
PKc_Mps1 cd14131
Catalytic domain of the Dual-specificity Mitotic checkpoint protein kinase, Monopolar spindle ...
144-295 1.18e-08

Catalytic domain of the Dual-specificity Mitotic checkpoint protein kinase, Monopolar spindle 1 (also called TTK); Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. TTK/Mps1 is a spindle checkpoint kinase that was first discovered due to its necessity in centrosome duplication in budding yeast. It was later found to function in the spindle assembly checkpoint, which monitors the proper attachment of chromosomes to the mitotic spindle. In yeast, substrates of Mps1 include the spindle pole body components Spc98p, Spc110p, and Spc42p. The TTK/Mps1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271033 [Multi-domain]  Cd Length: 271  Bit Score: 56.07  E-value: 1.18e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820 144 VGSGYTKAVYRVRLPGGAAVALKAVDFSGHDlgscvrefgarrgcyRLAAHKLLKEMVLLERLRH-PNVLQLYGYCYQDS 222
Cdd:cd14131    9 LGKGGSSKVYKVLNPKKKIYALKRVDLEGAD---------------EQTLQSYKNEIELLKKLKGsDRIIQLYDYEVTDE 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820 223 egiPDTLTTITELGApVEMIQLLQTSWE----DRFRI-----CLSLGRLLHH--LAHSplgsvtllDFRPRQFVLVNGEL 291
Cdd:cd14131   74 ---DDYLYMVMECGE-IDLATILKKKRPkpidPNFIRyywkqMLEAVHTIHEegIVHS--------DLKPANFLLVKGRL 141

                 ....
gi 208431820 292 KVTD 295
Cdd:cd14131  142 KLID 145
PIP49_C pfam12260
Protein-kinase domain of FAM69; This is the C-terminal region of a family of FAM69 proteins ...
200-370 1.87e-08

Protein-kinase domain of FAM69; This is the C-terminal region of a family of FAM69 proteins from Metazoa and Viridiplantae that are active protein-kinases. The family members have a short transmembrane helix close to the N-terminus, and thereafter are highly enriched with cysteines. FAM69 proteins are localized to the endoplasmic reticulum. Many members also have a short EF-hand, calcium-binding, domain just upstream of the kinase domain. The exact function of the more N-terminal family is uncertain.


Pssm-ID: 463512  Cd Length: 188  Bit Score: 54.22  E-value: 1.87e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820  200 MVLLERLRHpnVLQLYGYC--YQDSEGIPDTLTtiteLGAPVEMIQLLQTSWEDRFRICLSLGRLLHHLAHSPLGSVTLL 277
Cdd:pfam12260  13 LQIFQDREP--FPKYLGSCgrLYVVEYVGAGPL----LGISRRPLDWFSPPWPRRAKIALQLLELVEDLFNGDPGFLYMC 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820  278 DFRPRQF-VLVNGELKVTDLD--------DARVEETPCTSSADCTLeFPARNFSLPCSAQgwCEGMNEKRNLYNAYRFFF 348
Cdd:pfam12260  87 DVSLENFgVTNDGRLKLVDLDnvfpedklRRKISEQKCEKDEDCDF-FDCLSFCDLEKDR--CSSEVVNPNLQKVCQKLL 163
                         170       180
                  ....*....|....*....|..
gi 208431820  349 TYLLpHSAPPSLRPLLDSIVNA 370
Cdd:pfam12260 164 DYLL-RGPPSPLPEELEKLLQE 184
STKc_MAP3K-like cd13999
Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine ...
144-270 2.63e-08

Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed mainly of MAP3Ks and similar proteins, including TGF-beta Activated Kinase-1 (TAK1, also called MAP3K7), MAP3K12, MAP3K13, Mixed lineage kinase (MLK), MLK-Like mitogen-activated protein Triple Kinase (MLTK), and Raf (Rapidly Accelerated Fibrosarcoma) kinases. MAP3Ks (MKKKs or MAPKKKs) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Also included in this subfamily is the pseudokinase Kinase Suppressor of Ras (KSR), which is a scaffold protein that functions downstream of Ras and upstream of Raf in the Extracellular signal-Regulated Kinase (ERK) pathway.


Pssm-ID: 270901 [Multi-domain]  Cd Length: 245  Bit Score: 54.85  E-value: 2.63e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820 144 VGSGYTKAVYRVRLpGGAAVALKAVDfSGHDLGSCVREFgarrgcyrlaahklLKEMVLLERLRHPNVLQLYGYCYQdse 223
Cdd:cd13999    1 IGSGSFGEVYKGKW-RGTDVAIKKLK-VEDDNDELLKEF--------------RREVSILSKLRHPNIVQFIGACLS--- 61
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 208431820 224 giPDTLTTITEL---GAPVEMI--QLLQTSWEDRFRICLSLGRLLHHLaHSP 270
Cdd:cd13999   62 --PPPLCIVTEYmpgGSLYDLLhkKKIPLSWSLRLKIALDIARGMNYL-HSP 110
PKc cd00180
Catalytic domain of Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group ...
145-324 7.02e-07

Catalytic domain of Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. PKs make up a large family of serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and more than 500 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase.


Pssm-ID: 270622 [Multi-domain]  Cd Length: 215  Bit Score: 49.96  E-value: 7.02e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820 145 GSGYTKAVYRVR-LPGGAAVALKAVDFSGHDLgscvrefgarrgcyrlAAHKLLKEMVLLERLRHPNVLQLYGYCYQDSE 223
Cdd:cd00180    2 GKGSFGKVYKARdKETGKKVAVKVIPKEKLKK----------------LLEELLREIEILKKLNHPNIVKLYDVFETENF 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820 224 GIpdtltTITELGAPVEMIQLLQT-----SWEDRFRICLSLGRLLHHLaHSpLGsVTLLDFRPRQFVLV-NGELKVTDLD 297
Cdd:cd00180   66 LY-----LVMEYCEGGSLKDLLKEnkgplSEEEALSILRQLLSALEYL-HS-NG-IIHRDLKPENILLDsDGTVKLADFG 137
                        170       180
                 ....*....|....*....|....*..
gi 208431820 298 DARVEETPCTSSADCTLEFPARNFSLP 324
Cdd:cd00180  138 LAKDLDSDDSLLKTTGGTTPPYYAPPE 164
STKc_IRAK cd14066
Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases ...
144-269 1.29e-06

Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. IRAKs are involved in Toll-like receptor (TLR) and interleukin-1 (IL-1) signalling pathways, and are thus critical in regulating innate immune responses and inflammation. Some IRAKs may also play roles in T- and B-cell signaling, and adaptive immunity. Vertebrates contain four IRAKs (IRAK-1, -2, -3 (or -M), and -4) that display distinct functions and patterns of expression and subcellular distribution, and can differentially mediate TLR signaling. IRAK-1, -2, and -4 are ubiquitously expressed and are active kinases, while IRAK-M is only induced in monocytes and macrophages and is an inactive kinase. Variations in IRAK genes are linked to diverse diseases including infection, sepsis, cancer, and autoimmune diseases. IRAKs contain an N-terminal Death domain (DD), a proST region (rich in serines, prolines, and threonines), a central kinase domain (a pseudokinase domain in the case of IRAK3), and a C-terminal domain; IRAK-4 lacks the C-terminal domain. This subfamily includes plant receptor-like kinases (RLKs) including Arabidopsis thaliana BAK1 and CLAVATA1 (CLV1). BAK1 functions in BR (brassinosteroid)-regulated plant development and in pathways involved in plant resistance to pathogen infection and herbivore attack. CLV1, directly binds small signaling peptides, CLAVATA3 (CLV3) and CLAVATA3/EMBRYO SURROUNDING REGI0N (CLE), to restrict stem cell proliferation: the CLV3-CLV1-WUS (WUSCHEL) module influences stem cell maintenance in the shoot apical meristem, and the CLE40 (CLAVATA3/EMBRYO SURROUNDING REGION40) -ACR4 (CRINKLY4) -CLV1- WOX5 (WUSCHEL-RELATED HOMEOBOX5) module at the root apical meristem. The IRAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270968 [Multi-domain]  Cd Length: 272  Bit Score: 49.96  E-value: 1.29e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820 144 VGSGYTKAVYRVRLPGGAAVALKAVdFSGHDLGScVREFgarrgcyrlaahklLKEMVLLERLRHPNVLQLYGYCYQDSE 223
Cdd:cd14066    1 IGSGGFGTVYKGVLENGTVVAVKRL-NEMNCAAS-KKEF--------------LTELEMLGRLRHPNLVRLLGYCLESDE 64
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 208431820 224 G--IPDTL--TTITELGAPVEMIQLLqtSWEDRFRICLSLGRLLHHLaHS 269
Cdd:cd14066   65 KllVYEYMpnGSLEDRLHCHKGSPPL--PWPQRLKIAKGIARGLEYL-HE 111
STKc_Aurora-A cd14116
Catalytic domain of the Serine/Threonine kinase, Aurora-A kinase; STKs catalyze the transfer ...
194-296 9.80e-06

Catalytic domain of the Serine/Threonine kinase, Aurora-A kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Aurora kinases are key regulators of mitosis and are essential for the accurate and equal division of genomic material from parent to daughter cells. Vertebrates contain at least 2 Aurora kinases (A and B); mammals contains a third Aurora kinase gene (C). Aurora-A regulates cell cycle events from the late S-phase through the M-phase including centrosome maturation, mitotic entry, centrosome separation, spindle assembly, chromosome alignment, cytokinesis, and mitotic exit. Aurora-A activation depends on its autophosphorylation and binding to the microtubule-associated protein TPX2, which also localizes the kinase to spindle microtubules. Aurora-A is overexpressed in many cancer types such as prostate, ovarian, breast, bladder, gastric, and pancreatic. The Aurora subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271018 [Multi-domain]  Cd Length: 258  Bit Score: 47.26  E-value: 9.80e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820 194 HKLLKEMVLLERLRHPNVLQLYGYcYQDSEGIpdtlTTITELGAPVEMIQLLQ--TSWEDRfRICLSLGRLLHHLAHSPL 271
Cdd:cd14116   50 HQLRREVEIQSHLRHPNILRLYGY-FHDATRV----YLILEYAPLGTVYRELQklSKFDEQ-RTATYITELANALSYCHS 123
                         90       100
                 ....*....|....*....|....*.
gi 208431820 272 GSVTLLDFRPRQFVL-VNGELKVTDL 296
Cdd:cd14116  124 KRVIHRDIKPENLLLgSAGELKIADF 149
PKc_TESK cd14155
Catalytic domain of the Dual-specificity protein kinase, Testicular protein kinase; ...
144-269 2.06e-05

Catalytic domain of the Dual-specificity protein kinase, Testicular protein kinase; Dual-specificity PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine as well as tyrosine residues on protein substrates. TESK proteins phosphorylate cofilin and induce actin cytoskeletal reorganization. In the Drosphila eye, TESK is required for epithelial cell organization. Mammals contain two TESK proteins, TESK1 and TESK2, which are highly expressed in testis and play roles in spermatogenesis. TESK1 is found in testicular germ cells while TESK2 is expressed mainly in nongerminal Sertoli cells. TESK1 is stimulated by integrin-mediated signaling pathways. It regulates cell spreading and focal adhesion formation. The TESK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine PKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271057 [Multi-domain]  Cd Length: 253  Bit Score: 45.93  E-value: 2.06e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820 144 VGSGYTKAVYRVR-LPGGAAVALKavdfsghdlgscVREFGARRGcyrlaahKLLKEMVLLERLRHPNVLQLYGYCYQDS 222
Cdd:cd14155    1 IGSGFFSEVYKVRhRTSGQVMALK------------MNTLSSNRA-------NMLREVQLMNRLSHPNILRFMGVCVHQG 61
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 208431820 223 EgipdtLTTITEL--GAPVEmiQLLQT----SWEDRFRICLSLGRLLHHLaHS 269
Cdd:cd14155   62 Q-----LHALTEYinGGNLE--QLLDSneplSWTVRVKLALDIARGLSYL-HS 106
STKc_RIP cd13978
Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein; STKs catalyze ...
144-301 1.43e-04

Catalytic domain of the Serine/Threonine kinase, Receptor Interacting Protein; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. RIP kinases serve as essential sensors of cellular stress. They are involved in regulating NF-kappaB and MAPK signaling, and are implicated in mediating cellular processes such as apoptosis, necroptosis, differentiation, and survival. RIP kinases contain a homologous N-terminal kinase domain and varying C-terminal domains. Higher vertebrates contain multiple RIP kinases, with mammals harboring at least five members. RIP1 and RIP2 harbor C-terminal domains from the Death domain (DD) superfamily while RIP4 contains ankyrin (ANK) repeats. RIP3 contain a RIP homotypic interaction motif (RHIM) that facilitates binding to RIP1. RIP1 and RIP3 are important in apoptosis and necroptosis, while RIP2 and RIP4 play roles in keratinocyte differentiation and inflammatory immune responses. The RIP subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270880 [Multi-domain]  Cd Length: 263  Bit Score: 43.60  E-value: 1.43e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820 144 VGSGYTKAVYRVR-LPGGAAVALKAVdfsgHDLGSCVREFGArrgcyrlaahkLLKEMVLLERLRHPNVLQLYGYCYQDS 222
Cdd:cd13978    1 LGSGGFGTVSKARhVSWFGMVAIKCL----HSSPNCIEERKA-----------LLKEAEKMERARHSYVLPLLGVCVERR 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820 223 E-GIpdtLTTITELGAPVEMIQLLQTS--WEDRFRICL--SLG-RLLHHLAhSPLgsvTLLDFRPRQFVLVNG-ELKVTD 295
Cdd:cd13978   66 SlGL---VMEYMENGSLKSLLEREIQDvpWSLRFRIIHeiALGmNFLHNMD-PPL---LHHDLKPENILLDNHfHVKISD 138

                 ....*.
gi 208431820 296 LDDARV 301
Cdd:cd13978  139 FGLSKL 144
STKc_CDK10 cd07845
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10; STKs ...
132-308 3.55e-04

Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 173742 [Multi-domain]  Cd Length: 309  Bit Score: 42.74  E-value: 3.55e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820 132 CAALRNVSGAQYVGSGYTKAVYRVR-LPGGAAVALKAVDFSGHDLGSCVREfgarrgcyrlaahklLKEMVLLERLRHPN 210
Cdd:cd07845    3 CRSVTEFEKLNRIGEGTYGIVYRARdTTSGEIVALKKVRMDNERDGIPISS---------------LREITLLLNLRHPN 67
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820 211 VLQL---------------YGYCYQDSEGIPDTLTT-ITELGAPVEMIQLLQTSwedrfriclslgRLLHH--LAHSPLG 272
Cdd:cd07845   68 IVELkevvvgkhldsiflvMEYCEQDLASLLDNMPTpFSESQVKCLMLQLLRGL------------QYLHEnfIIHRDLK 135
                        170       180       190
                 ....*....|....*....|....*....|....*.
gi 208431820 273 SVTLLdfrprqfVLVNGELKVTDLDDARVEETPCTS 308
Cdd:cd07845  136 VSNLL-------LTDKGCLKIADFGLARTYGLPAKP 164
PTKc_DDR_like cd05097
Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases; PTKs catalyze the ...
192-264 3.55e-04

Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor PTKs (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. The DDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 133228 [Multi-domain]  Cd Length: 295  Bit Score: 42.66  E-value: 3.55e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 208431820 192 AAHKLLKEMVLLERLRHPNVLQLYGYCYQDsegipDTLTTITELGAPVEMIQLL-QTSWEDRFRI-----CLSLGRLLH 264
Cdd:cd05097   60 ARNDFLKEIKIMSRLKNPNIIRLLGVCVSD-----DPLCMITEYMENGDLNQFLsQREIESTFTHannipSVSIANLLY 133
PTKc cd00192
Catalytic domain of Protein Tyrosine Kinases; PTKs catalyze the transfer of the ...
195-264 4.54e-04

Catalytic domain of Protein Tyrosine Kinases; PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers.The PTK family is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270623 [Multi-domain]  Cd Length: 262  Bit Score: 42.14  E-value: 4.54e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 208431820 195 KLLKEMVLLERLRHPNVLQLYGYCYQDsegipDTLTTITELGAPVEMIQLLQTSWEDRF---RICLSLGRLLH 264
Cdd:cd00192   42 DFLKEARVMKKLGHPNVVRLLGVCTEE-----EPLYLVMEYMEGGDLLDFLRKSRPVFPspePSTLSLKDLLS 109
TyrKc smart00219
Tyrosine kinase, catalytic domain; Phosphotransferases. Tyrosine-specific kinase subfamily.
195-221 9.21e-04

Tyrosine kinase, catalytic domain; Phosphotransferases. Tyrosine-specific kinase subfamily.


Pssm-ID: 197581 [Multi-domain]  Cd Length: 257  Bit Score: 40.98  E-value: 9.21e-04
                           10        20
                   ....*....|....*....|....*..
gi 208431820   195 KLLKEMVLLERLRHPNVLQLYGYCYQD 221
Cdd:smart00219  47 EFLREARIMRKLDHPNVVKLLGVCTEE 73
STYKc smart00221
Protein kinase; unclassified specificity; Phosphotransferases. The specificity of this class ...
196-221 9.65e-04

Protein kinase; unclassified specificity; Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.


Pssm-ID: 214568 [Multi-domain]  Cd Length: 258  Bit Score: 41.00  E-value: 9.65e-04
                           10        20
                   ....*....|....*....|....*.
gi 208431820   196 LLKEMVLLERLRHPNVLQLYGYCYQD 221
Cdd:smart00221  48 FLREARIMRKLDHPNIVKLLGVCTEE 73
PKc_LIMK_like cd14065
Catalytic domain of the LIM domain kinase-like protein kinases; PKs catalyze the transfer of ...
196-269 1.05e-03

Catalytic domain of the LIM domain kinase-like protein kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. Members of this subfamily include LIMK, Testicular or testis-specific protein kinase (TESK), and similar proteins. LIMKs are characterized as serine/threonine kinases (STKs) while TESKs are dual-specificity protein kinases. Both LIMK and TESK phosphorylate and inactivate cofilin, an actin depolymerizing factor, to induce the reorganization of the actin cytoskeleton. They are implicated in many cellular functions including cell spreading, motility, morphogenesis, meiosis, mitosis, and spermatogenesis. The LIMK-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270967 [Multi-domain]  Cd Length: 252  Bit Score: 40.94  E-value: 1.05e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820 196 LLKEMVLLERLRHPNVLQLYGYCYQDSEgipdtLTTITEL--GAPVEmiQLL-----QTSWEDRFRICLSLGRLLHHLaH 268
Cdd:cd14065   35 FLKEVKLMRRLSHPNILRFIGVCVKDNK-----LNFITEYvnGGTLE--ELLksmdeQLPWSQRVSLAKDIASGMAYL-H 106

                 .
gi 208431820 269 S 269
Cdd:cd14065  107 S 107
STK_BAK1_like cd14664
Catalytic domain of the Serine/Threonine Kinase, BRI1 associated kinase 1 and related STKs; ...
144-271 2.43e-03

Catalytic domain of the Serine/Threonine Kinase, BRI1 associated kinase 1 and related STKs; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes three leucine-rich repeat receptor-like kinases (LRR-RLKs): Arabidopsis thaliana BAK1 and CLAVATA1 (CLV1), and Physcomitrella patens CLL1B clavata1-like receptor S/T protein kinase. BAK1 functions in various signaling pathways. It plays a role in BR (brassinosteroid)-regulated plant development as a co-receptor of BRASSINOSTEROID (BR) INSENSITIVE 1 (BRI1), the receptor for BRs, and is required for full activation of BR signaling. It also modulates pathways involved in plant resistance to pathogen infection (pattern-triggered immunity, PTI) and herbivore attack (wound- or herbivore feeding-induced accumulation of jasmonic acid (JA) and JA-isoleucine. CLV1, directly binds small signaling peptides, CLAVATA3 (CLV3) and CLAVATA3/EMBRYO SURROUNDING REGI0N (CLE), to restrict stem cell proliferation: the CLV3-CLV1-WUS (WUSCHEL) module influences stem cell maintenance in the shoot apical meristem, and the CLE40 (CLAVATA3/EMBRYO SURROUNDING REGION40) -ACR4 (CRINKLY4) -CLV1- WOX5 (WUSCHEL-RELATED HOMEOBOX5) module at the root apical meristem. The STK_BAK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271134 [Multi-domain]  Cd Length: 270  Bit Score: 39.79  E-value: 2.43e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 208431820 144 VGSGYTKAVYRVRLPGGAAVALKAVdfsghdlgscvrefgARRGCYRlAAHKLLKEMVLLERLRHPNVLQLYGYCYQdse 223
Cdd:cd14664    1 IGRGGAGTVYKGVMPNGTLVAVKRL---------------KGEGTQG-GDHGFQAEIQTLGMIRHRNIVRLRGYCSN--- 61
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 208431820 224 giPDTLTTITELGAPVEMIQLLQTS--------WEDRFRICLSLGRLLHHLAH--SPL 271
Cdd:cd14664   62 --PTTNLLVYEYMPNGSLGELLHSRpesqppldWETRQRIALGSARGLAYLHHdcSPL 117
STKc_Aurora cd14007
Catalytic domain of the Serine/Threonine kinase, Aurora kinase; STKs catalyze the transfer of ...
193-225 4.10e-03

Catalytic domain of the Serine/Threonine kinase, Aurora kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Aurora kinases are key regulators of mitosis and are essential for the accurate and equal division of genomic material from parent to daughter cells. Yeast contains only one Aurora kinase while most higher eukaryotes have two. Vertebrates contain at least 2 Aurora kinases (A and B); mammals contains a third Aurora kinase gene (C). Aurora-A regulates cell cycle events from the late S-phase through the M-phase including centrosome maturation, mitotic entry, centrosome separation, spindle assembly, chromosome alignment, cytokinesis, and mitotic exit. Aurora-A activation depends on its autophosphorylation and binding to the microtubule-associated protein TPX2. Aurora-B is most active at the transition during metaphase to the end of mitosis. It is critical for accurate chromosomal segregation, cytokinesis, protein localization to the centrosome and kinetochore, correct microtubule-kinetochore attachments, and regulation of the mitotic checkpoint. Aurora-C is mainly expressed in meiotically dividing cells; it was originally discovered in mice as a testis-specific STK called Aie1. Both Aurora-B and -C are chromosomal passenger proteins that can form complexes with INCENP and survivin, and they may have redundant cellular functions. The Aurora subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270909 [Multi-domain]  Cd Length: 253  Bit Score: 38.99  E-value: 4.10e-03
                         10        20        30
                 ....*....|....*....|....*....|...
gi 208431820 193 AHKLLKEMVLLERLRHPNVLQLYGYcYQDSEGI 225
Cdd:cd14007   44 EHQLRREIEIQSHLRHPNILRLYGY-FEDKKRI 75
STKc_Nek6_7 cd08224
Catalytic domain of the Serine/Threonine Kinases, Never In Mitosis gene A (NIMA)-related ...
144-215 5.06e-03

Catalytic domain of the Serine/Threonine Kinases, Never In Mitosis gene A (NIMA)-related kinase 6 and 7; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Nek6/7 is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270863 [Multi-domain]  Cd Length: 262  Bit Score: 38.79  E-value: 5.06e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 208431820 144 VGSGYTKAVYRVR-LPGGAAVALKAVD-FSGHDLGscvrefgARRGCyrlaahklLKEMVLLERLRHPNVLQLY 215
Cdd:cd08224    8 IGKGQFSVVYRARcLLDGRLVALKKVQiFEMMDAK-------ARQDC--------LKEIDLLQQLNHPNIIKYL 66
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH