|
Name |
Accession |
Description |
Interval |
E-value |
| ND4 |
MTH00204 |
NADH dehydrogenase subunit 4; Provisional |
1-484 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 164750 [Multi-domain] Cd Length: 485 Bit Score: 576.63 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 1 MFLVPLFAFPILGILNVILTRRHQENKTKIRGLQWSIASLVYFFFLWWTTPSHYRFSFHTSIEWLTLHQVKLNWGPLAFA 80
Cdd:MTH00204 1 NGLSLIFLILFMGIINVMGVPRENSVKLKKRALEWSLAILFSTLVLWGAFDGEGQFQFINLIEWIISPTLNFQWGPLVFA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 81 IDGVSIFFIGLTILLIPICILVSWTSIRYLIKEFVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGVWGSREE 160
Cdd:MTH00204 81 VDGVSLFFILLTTLLIPICILISWKSIKFLFKEFLLCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREE 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 161 KVRAAFYFFFYTLVGSLFMLICIFKIYELTGTTNYLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIPFHIWLPQAHVEAP 240
Cdd:MTH00204 161 KVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAP 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 241 VAGSVVLAGILLKLGGYGFIRFSFPLFPCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIFT 320
Cdd:MTH00204 241 VAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFAPLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGLVPLGLFT 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 321 HSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGEFLSIL 400
Cdd:MTH00204 321 HTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 401 SAFQYAWWAGVLACSGVILSATYALYMYNRIFFGSLSPMILYSREMTRREFDALLPLLVFTLLLGILPNALLYGMTMGSY 480
Cdd:MTH00204 401 AAFEYSLGLGVLVTSGMVWSAAYSLYLYNRISFGGGSNYLLFSRDLNRRELLAILPLIIAIFLLGIVPFIIIDLVKNSLV 480
|
....
gi 2086859774 481 ATVG 484
Cdd:MTH00204 481 FSPG 484
|
|
| ND4 |
MTH00217 |
NADH dehydrogenase subunit 4; Provisional |
6-472 |
0e+00 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214462 [Multi-domain] Cd Length: 482 Bit Score: 564.68 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 6 LFAFPILGILNVILTRRHQENKTKIRGLQWSIASLVYFFFLWWTTPSHYRFSFHTSIEWLTlhQVKLNWGPLAFAIDGVS 85
Cdd:MTH00217 5 VFILPLIGILHLLIIPRDNIVRLKKIALEWSLLTLTATILLWASFDGEGQFQAIKKFEWIP--GIEPVFGPVVFAVDGIS 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 86 IFFIGLTILLIPICILVSWTSIRYLIKEFVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGVWGSREEKVRAA 165
Cdd:MTH00217 83 IFFLILTALLTPICILISWNSIKFLIKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQAS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 166 FYFFFYTLVGSLFMLICIFKIYELTGTTNYLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIPFHIWLPQAHVEAPVAGSV 245
Cdd:MTH00217 163 YYFFFYTFIGSVFMLLGIFTLYSYAGTTDYQALCCLKIEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSV 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 246 VLAGILLKLGGYGFIRFSFPLFPCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIFTHSIEG 325
Cdd:MTH00217 243 ILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQTLSLLAIIYGSLTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQG 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 326 LVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGEFLSILSAFQY 405
Cdd:MTH00217 323 LVAAIFLMLAHGLVSSALFIAVTFLYERHHTRLIKYYRGMVITMPLFGILMLLLVLANASIPLSCNFVGEFLSLLAAFEY 402
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2086859774 406 AWWAGVLACSGVILSATYALYMYNRIFFGSLSPMILYSREMTRREFDALLPLLVFTLLLGILPNALL 472
Cdd:MTH00217 403 SYIVGVLASLGMVLSAGYSIYLYNRVCFGAPSKYLYFSRDLNRREFYVLLPLVFLIYLMGIFPFIII 469
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-472 |
4.86e-150 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 436.82 E-value: 4.86e-150
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 1 MFLVPLFAFPILGILNVILTRRHQENKTKIRGLQWSIASLVYFFFLWWT-TPSHYRFSFHTSIEWLTlhQVKLNWgplAF 79
Cdd:COG1008 4 PLLSLLILLPLLGALLLLLLPRRNARLARWVALAVSLLTLLLSLYLLAGfDPGTGGFQFVESYPWIP--SLGISY---HL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 80 AIDGVSIFFIGLTILLIPICILVSWTSIRYLIKEFVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGVWGSrE 159
Cdd:COG1008 79 GVDGISLPLVLLTALLTPLAILASWNEIKKRPKLYYALLLLLEAGMIGVFLALDLFLFYVFWELMLIPMYFLIGIWGG-E 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 160 EKVRAAFYFFFYTLVGSLFMLICIFKIYELTGTT--NYLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIPFHIWLPQAHV 237
Cdd:COG1008 158 RRIYAAIKFFLYTLAGSLLMLVAILALYFLAGALtfDIAELAAAPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHV 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 238 EAPVAGSVVLAGILLKLGGYGFIRFSFPLFPCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLS 317
Cdd:COG1008 238 EAPTAGSVLLAGVLLKMGGYGLLRFALPLFPEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLG 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 318 IFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGEFL 397
Cdd:COG1008 318 IFALNPLGLQGAVLQMVSHGLITAALFLLVGVLYDRTHTRDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEFL 397
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2086859774 398 SILSAFQYAWWAGVLACSGVILSATYALYMYNRIFFGSLSPMILYSREMTRREFDALLPLLVFTLLLGILPNALL 472
Cdd:COG1008 398 VLLGAFQVNPWLAILAALGLILTAAYLLWMYQRVFFGPLKEELAELPDLNPRELAVLAPLAALILLLGLYPQPLL 472
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
1-472 |
3.75e-145 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 425.00 E-value: 3.75e-145
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 1 MFLVPLFAFPILGILNVILTRRHQENKTKIRGLQWSIASLVYFFFLWWTT-PSHYRFSFHTSIEWLTLHQVKLnwgplAF 79
Cdd:PRK05846 4 PLLSLLIFLPLIGGLLVLLTERFGARLARWIALIGTLLTLLLSLVLWIGFdSSNAGFQFVEKHPWIPRFGISY-----HL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 80 AIDGVSIFFIGLTILLIPICILVSWTSIRYLIKEFVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGVWGsRE 159
Cdd:PRK05846 79 GVDGISLLLVVLTALLTPLAVLASWEEIKKRVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVWG-GK 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 160 EKVRAAFYFFFYTLVGSLFMLICIFKIYELTGTTN----YLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIPFHIWLPQA 235
Cdd:PRK05846 158 NRIYAATKFFLYTLLGSLLMLVAIIYLVVVYYNATgtfdIADLLNLPLPPGVQYWLFLAFFIAFAVKMPMFPLHTWLPDA 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 236 HVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFPCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVT 315
Cdd:PRK05846 238 HVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDASHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGFVT 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 316 LSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGE 395
Cdd:PRK05846 318 LGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVLYDRLHTRDIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGE 397
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2086859774 396 FLSILSAFQYAWWAGVLACSGVILSATYALYMYNRIFFGSLSPMILYSREMTRREFDALLPLLVFTLLLGILPNALL 472
Cdd:PRK05846 398 FLILLGSFQVNPVIAFIATTGLILAAVYSLWLYQRVMFGPVKNEVAKLKDLNGRELLILLPLVALLLLLGVYPKPLL 474
|
|
| ND4 |
MTH00226 |
NADH dehydrogenase subunit 4; Provisional |
33-472 |
3.58e-143 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214466 [Multi-domain] Cd Length: 505 Bit Score: 420.10 E-value: 3.58e-143
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 33 LQWSIASLVYFFFLWWTTPSHYRFSFHTSIEWLTLHQVKLN---WGPLAFAIDGVSIFFIGLTILLIPICILVSWTSIRY 109
Cdd:MTH00226 49 LFWSFISLISTIILWLSLDQEGGFTPLMDIDWIEGPEKIIPiimGGPLVFAVDGISIYFIILTGFIVPCSILISWHSVKY 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 110 LIKEFVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGVWGSREEKVRAAFYFFFYTLVGSLFMLICIFKIYEL 189
Cdd:MTH00226 129 LTKSFLICMLILEFLLYAVFSVLDIFMFYILFEGVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLFSLYNI 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 190 --TGTTNYLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIPFHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFPLF 267
Cdd:MTH00226 209 hgTTDYLTLASCSHVVSEQTQKWIFLGIFLAMAVKIPIFPFHIWLPKAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPIL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 268 PCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGV 347
Cdd:MTH00226 289 PLGAQNLAPAVIAMGIVGIVYGSFATCRQIDVKRLVAYSSVAHMGLVSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILV 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 348 TVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGEFLSILSAFQYAWWAGVLACSGVILSATYALYM 427
Cdd:MTH00226 369 TILYDRHHTRLIKYYRGLSITMPIWGTIMIVTSLANVAVPPSGNFIGEYLSILSSFNWNPIIGVFVCSGVILSAVYSFYF 448
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 2086859774 428 YNRIFFGSLSPMILYSREMTRREFDALLPLLVFTLLLGILPNALL 472
Cdd:MTH00226 449 ANRVTFGAPGNLITFARDVNRREFYITASMVFFAFLIGIYPIFIL 493
|
|
| NDH_I_M |
TIGR01972 |
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ... |
6-472 |
9.53e-126 |
|
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273903 [Multi-domain] Cd Length: 481 Bit Score: 374.66 E-value: 9.53e-126
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 6 LFAFPILGILNVILTRRHQENKTKIRGLQWSIASLVYFFFLWWT-TPSHYRFSFHTSIEWLTlhQVKLNWgplAFAIDGV 84
Cdd:TIGR01972 4 LIFLPLIGALLILLLPSNKDGKARWIALVVALATLLLSLLLLFQfDPTGSGFQFTEDIPWIP--ALGISY---HLGVDGI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 85 SIFFIGLTILLIPICILVSWTSIRYLIKEFVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGVWGsREEKVRA 164
Cdd:TIGR01972 79 SLLLVLLTALLTLLAILASWESIQKRVKEFYALLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIGVWG-GPNRIYA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 165 AFYFFFYTLVGSLFMLICIFKIY-ELTGTTNYLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIPFHIWLPQAHVEAPVAG 243
Cdd:TIGR01972 158 AMKFFLYTLAGSLLMLLAILGLYfLGGGTFDLLELLNLPLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAG 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 244 SVVLAGILLKLGGYGFIRFSFPLFPCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIFTHSI 323
Cdd:TIGR01972 238 SVILAGVLLKMGTYGFLRFNLPLFPDASLYFAPVLAALGVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNE 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 324 EGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGEFLSILSAF 403
Cdd:TIGR01972 318 LGISGAVFQMISHGLITAALFLLVGVLYERAHTRDIAKYGGLANKMPVLAAFFMLFAMASLGLPGTSGFVGEFLILLGSF 397
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 404 QYAWWAGVLACSGVILSATYALYMYNRIFFGSLS-PMILYSREMTRREFDALLPLLVFTLLLGILPNALL 472
Cdd:TIGR01972 398 KVNPVVAFLAALGIVLAAAYMLTLYKRVFFGELSnPEVAEFPDLNGREIAVLAPLVVLILFLGLYPNPLL 467
|
|
| ND4 |
MTH00206 |
NADH dehydrogenase subunit 4; Provisional |
45-451 |
5.11e-80 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214458 [Multi-domain] Cd Length: 450 Bit Score: 256.02 E-value: 5.11e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 45 FLWWTTPSH-YRFSFHTSIEWLTLHQVKLNWGPLAFAIDGVSIFFIGLTILLIPICILVSWTSIRYLI----KEFVISLF 119
Cdd:MTH00206 20 WLWRSTTFFsFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEPinrqRIYITLLI 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 120 LIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGVWGSREEKVRAAFYFFFYTLVGSLFMLICIFKIYELTGTTNYLTLL 199
Cdd:MTH00206 100 VLQLFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLSLYILY 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 200 TLELPSDLQTWLFVGFFLSLAVKIPMIPFHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFPCASEYLSPIVI 279
Cdd:MTH00206 180 FSKLTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIILILGPSTKLSSYFFII 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 280 tLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSI 359
Cdd:MTH00206 260 -LGLWGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTI 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 360 RYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGEFLSILSAFQYAWWAGVLACSGVILSATYALYMYNRIFFGSLSPM 439
Cdd:MTH00206 339 LGNRGLQMILPLLSFWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAIYSLYMFVMTQHGKTPNH 418
|
410
....*....|..
gi 2086859774 440 ILYSREMTRREF 451
Cdd:MTH00206 419 LLSLSPSSTREH 430
|
|
| ND4 |
MTH00150 |
NADH dehydrogenase subunit 4; Provisional |
79-451 |
8.27e-78 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214435 [Multi-domain] Cd Length: 417 Bit Score: 248.99 E-value: 8.27e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 79 FAIDGVSIFFIGLTILLIPICILVSWTSIRYLIK--EFVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGVWG 156
Cdd:MTH00150 20 FSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKssSFSLLVLLLCLILVLAFSVSSLLMFYFFFEASLIPTLLLILGWG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 157 SREEKVRAAFYFFFYTLVGSLFMLICIFKIYELTGTTNYLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIPFHIWLPQAH 236
Cdd:MTH00150 100 YQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSFMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWLPKAH 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 237 VEAPVAGSVVLAGILLKLGGYGFIRFsFPLFPCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTL 316
Cdd:MTH00150 180 VEAPVAGSMILAGILLKLGGYGILRM-MMVFSLSSSSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLVLA 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 317 SIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGEF 396
Cdd:MTH00150 259 GVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFLFCIINMAAPPSLNLLSEI 338
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2086859774 397 LSILSAFQYAWWAGVLACSGVILSATYALYMYNRIFFGSLSPMILYSREMTRREF 451
Cdd:MTH00150 339 MIFPSLISYSPWFFVPLGLMVFLSGLYSLYLYTSIQHGGSSSFLKPFNELKSSEM 393
|
|
| ND4 |
MTH00163 |
NADH dehydrogenase subunit 4; Provisional |
79-451 |
1.15e-75 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214443 [Multi-domain] Cd Length: 445 Bit Score: 244.29 E-value: 1.15e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 79 FAIDGVSIFFIGLTILLIPICILVSWT--SIRYLIKEFVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGVWG 156
Cdd:MTH00163 52 FGLDLLSFGLILLSFWICMLMILSSESvyKKNNYSNLFLFLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWG 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 157 SREEKVRAAFYFFFYTLVGSLFMLICIFKIYELTGTTNYLTLLTLelpSDLQTWLFVGFFLSLAVKIPMIPFHIWLPQAH 236
Cdd:MTH00163 132 YQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFLLNFF---GSLNFLWYLSMILAFLVKMPMFFVHLWLPKAH 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 237 VEAPVAGSVVLAGILLKLGGYGFIRFsFPLFPCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTL 316
Cdd:MTH00163 209 VEAPVSGSMILAGVLLKLGGYGLLRV-MSFFSKLGLKFNYIWISISLVGGVIVSLICLRQVDLKSLIAYSSVAHMGLVLG 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 317 SIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGEF 396
Cdd:MTH00163 288 GLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLGSRSLLINKGLLNFMPSMSLWWFLLSSSNMAAPPSLNLLGEI 367
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2086859774 397 LSILSAFQYAWWAGVLACSGVILSATYALYMYNRIFFGSLSPMILYSREMTRREF 451
Cdd:MTH00163 368 SLINSLISWSKLSMIFLMLLSFFSAAYSLYLYSYSQHGKYYSGLYSCSSGKVREY 422
|
|
| ND4 |
MTH00124 |
NADH dehydrogenase subunit 4; Provisional |
48-450 |
1.72e-71 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214427 [Multi-domain] Cd Length: 457 Bit Score: 233.93 E-value: 1.72e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 48 WTTPSHYRFSFHT-SIEWLTLHQVKLNWGPLAFAIDGVSIFFIGLTILLIPICILVSWTSiryLIKE-------FVISLF 119
Cdd:MTH00124 24 WTNTTTYSLLIALlSLQWLKPPYYPTKNLTQWLGIDQISAPLLVLSCWLLPLMILASQNH---LQHEplqrkrtFLTTLI 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 120 LIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGVWGSREEKVRAAFYFFFYTLVGSLFMLICIFKIYeLTGTTNYLTLL 199
Cdd:MTH00124 101 LLQTFLILAFSATELTLFYIMFEATLIPTLILITRWGNQPERLSAGTYFLFYTLISSLPLLIAILYLH-NQTGTLSLPML 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 200 TLELPSDLQTW----LFVGFFLSLAVKIPMIPFHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSfPLFPCASEYLS 275
Cdd:MTH00124 180 QLTHPTLTNSWtnllLWLACLMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGIIRIT-LLLPPLSNTLH 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 276 PIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHH 355
Cdd:MTH00124 259 YPFLTLALWGALMTSLICLRQTDLKSLIAYSSVSHMGLVIAATMIQTPWSLSGAMILMIAHGLTSSMLFCLANTNYERTH 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 356 TRSIRYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGEFLSILSAFQYAWWAGVLACSGVILSATYALYMYNRIFFGS 435
Cdd:MTH00124 339 SRTLLLTRGLQLLLPLMTTWWLLANLTNMALPPTINLMGELTIMTSLFNWSPTTIILTGLATLITASYTLYMFLSTQRGT 418
|
410
....*....|....*
gi 2086859774 436 LSPMILYSREMTRRE 450
Cdd:MTH00124 419 LPTHITTIQPTHTRE 433
|
|
| ND4 |
MTH00068 |
NADH dehydrogenase subunit 4; Provisional |
46-428 |
6.30e-71 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214417 [Multi-domain] Cd Length: 458 Bit Score: 232.50 E-value: 6.30e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 46 LWWTTPSHYRFSFHTSIEWLTLHQVKLNWGPLAFAIDGVSIFFIGLTILLIPICILVSWTSIR----YLIKEFVISLFLI 121
Cdd:MTH00068 23 LWTLTTTNSLIIAFLSLMWFNLPSETMNFTNKYFGIDQISSPLLILTCWLLPLMILASQNHLKnepiNRQRTYISMLIIL 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 122 ELLLIGVFTTLDILVFYVLFEGILIPMFIIIGVWGSREEKVRAAFYFFFYTLVGSLFMLICIFKIYELTGTTNYLTLLTL 201
Cdd:MTH00068 103 QLTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLILLELM 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 202 ElPSDLQTW----LFVGFFLSLAVKIPMIPFHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFPCASEYLSPI 277
Cdd:MTH00068 183 S-PMQLMTYtnkiWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILRISILLTPLSKELSYPF 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 278 VItLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTR 357
Cdd:MTH00068 262 II-LALWGVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANTNYERTHSR 340
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2086859774 358 SIRYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGEFLSILSAFQYAWWAGVLACSGVILSATYALYMY 428
Cdd:MTH00068 341 TLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLFNWSNWTILITGLGTLITAAYTLYMF 411
|
|
| ND4 |
MTH00044 |
NADH dehydrogenase subunit 4; Validated |
77-450 |
1.91e-67 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214411 [Multi-domain] Cd Length: 458 Bit Score: 223.31 E-value: 1.91e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 77 LAFAIDGVSIFFIGLTILLIPICILVSWTSIRYL----IKEFVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMFIII 152
Cdd:MTH00044 55 LSLATDSLSSPLIILSCWLAPLSLLASINHLSNNspnnQRTFISLIIIILTALIITFSSLELILFYIAFETTLIPTLILI 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 153 GVWGSREEKVRAAFYFFFYTLVGSLFMLICIFKIYELTGTTNYLTLLTLELPSDLQT-----WLFVgfFLSLAVKIPMIP 227
Cdd:MTH00044 135 TRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSELNWLTSLSSNsssiwWIFC--ILAFLVKMPIYG 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 228 FHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFPCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSS 307
Cdd:MTH00044 213 FHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINLFSLPSANNISFILIVFCCWGALITSIICLRQTDLKALIAYSS 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 308 VAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANISFP 387
Cdd:MTH00044 293 VGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLP 372
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2086859774 388 STCNFIGEFLSILSAFQYAWWAGVLACSGVILSATYALYMYNRIFFGSLSPMILYSREMTRRE 450
Cdd:MTH00044 373 PLPNLIGELLIISSIISWSILSFPIIGLATVFGAIYSLLIYQLTNSGSFPSWISNVSPISSRE 435
|
|
| ND4 |
MTH00205 |
NADH dehydrogenase subunit 4; Provisional |
79-451 |
8.04e-67 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214457 [Multi-domain] Cd Length: 448 Bit Score: 221.39 E-value: 8.04e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 79 FAIDGVSIFFIGLTILLIPICILVSWT--SIRYLIKEFVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGVWG 156
Cdd:MTH00205 53 FSFDSLSLPLIMLSFWISLLMVLASYKvfKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILILGWG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 157 SREEKVRAAFYFFFYTLVGSLFMLICIFKIYELTGTTNYLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIPFHIWLPQAH 236
Cdd:MTH00205 133 YQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLFLYWIFLMLAFLVKLPMYFVHLWLPKAH 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 237 VEAPVAGSVVLAGILLKLGGYGFIRFSFPLFPCASeYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTL 316
Cdd:MTH00205 213 VEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNS-NFSELFFSISLWGGVMTGMICLRQVDLKSLIAYSSVGHMGLMVV 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 317 SIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGEF 396
Cdd:MTH00205 292 GVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNSRSMLMNKGVLNTFPFLVLMWFLLISCNMAAPPSLNLASEI 371
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2086859774 397 LSILSAFQYAWWAGVLACSGVILSATYALYMYNRIFFGSLSPMILYSREMTRREF 451
Cdd:MTH00205 372 LLIMSLLSSSKISGIPLSLISFLSGAYSLYLYSQSQHGKVSSQISSFLAISEREY 426
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
133-416 |
5.23e-65 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 211.79 E-value: 5.23e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 133 DILVFYVLFEGILIPMFIIIGVWGSREEKVRAAFYFFFYTLVGSLFMLICIFKIYEL---TGTTNYLTLLTLELPSDLQT 209
Cdd:pfam00361 3 DLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYtgtLSFDELSKALTGGLNSSGLL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 210 WLFVGFFLSLAVKIPMIPFHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFPcASEYLSPIVITLSLIAIVYG 289
Cdd:pfam00361 83 LLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLP-SSPFIQQILLILAIISMLLG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 290 SFTTCRQNDMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGV-TVLYDRHHTRSIRYYRGVCSS 368
Cdd:pfam00361 162 SLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLFSAGLFLCAgSVIYRRVHTRNIRDYGGLAKT 241
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 2086859774 369 MPLFATLMLCLTLANISFPSTCNFIGEFLSILSAFQYAWWAGVLACSG 416
Cdd:pfam00361 242 MPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWIFLVLAGVV 289
|
|
| ND4 |
MTH00127 |
NADH dehydrogenase subunit 4; Provisional |
45-428 |
1.98e-64 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177186 [Multi-domain] Cd Length: 459 Bit Score: 215.59 E-value: 1.98e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 45 FLWWTTPSHYRFSFHTSIEWLTLHQvKLNWGPLAF--AIDGVSIFFIGLTILLIPICILVSWTSIRY----LIKEFVISL 118
Cdd:MTH00127 22 WLWTTTLAHSLLIALASLTWLKNLS-ETGWSSLNLymATDPLSTPLLVLTCWLLPLMILASQNHTAPepinRQRMYITLL 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 119 FLIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGVWGSREEKVRAAFYFFFYTLVGSLFMLICIFkIYELTGTTNYLTL 198
Cdd:MTH00127 101 TSLQIFLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALL-LLQNSTGTLSMLT 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 199 LTLELPSDLQTW----LFVGFFLSLAVKIPMIPFHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFPCASEYL 274
Cdd:MTH00127 180 LQYSQPLQLSSWadklWWAGCLLAFLVKMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPLTKELS 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 275 SPIVItLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRH 354
Cdd:MTH00127 260 YPFII-LALWGIIMTGSICLRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERT 338
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2086859774 355 HTRSIRYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGEFLSILSAFQYAWWAGVLACSGVILSATYALYMY 428
Cdd:MTH00127 339 HSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLFNWSPWTLALTGLGTLITAGYSLYMF 412
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
40-440 |
3.95e-64 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 216.05 E-value: 3.95e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 40 LVYFFFLWWTTPSHYRFSFHTSIEWLTlhQVKLNWgplAFAIDGVSIFFIGLTILLIPICILVSWtSIRYLIKEFVISLF 119
Cdd:PRK12561 21 LMCYVFWQHYDPSSSSLQLVERYAWLP--QIGLEW---SLGVDGLSMPLVLLSGLITTLSIFASW-KVTRKPRLFYFLML 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 120 LIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGVWGSrEEKVRAAFYFFFYTLVGSLFMLICIFKI--YELTGTTNYLT 197
Cdd:PRK12561 95 VLYSAQIGVFLAQDLLLFFLMWELELVPVYLLISIWGG-QKRLYAATKFILYTALASIFILVAGLALalSGDTFTFDLAE 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 198 LLTLELPSDLQTWLFVGFFLSLAVKIPMIPFHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFPCASEYLSPI 277
Cdd:PRK12561 174 LGAKSYPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPA 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 278 VITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTR 357
Cdd:PRK12561 254 LAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHTL 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 358 SIRYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGE---FLSILS--AFQYAWWAGV--LACSGVILSATYALYMYNR 430
Cdd:PRK12561 334 SIPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSEltvFLGITSsdVYSSTFRTITilLAAVGLILTPIYLLSMLRR 413
|
410
....*....|
gi 2086859774 431 IFFGSLSPMI 440
Cdd:PRK12561 414 VFYGPRSELL 423
|
|
| ND4 |
MTH00110 |
NADH dehydrogenase subunit 4; Provisional |
77-428 |
4.71e-64 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177172 [Multi-domain] Cd Length: 459 Bit Score: 214.37 E-value: 4.71e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 77 LAFAIDGVSIFFIGLTILLIPICILVSWtsiRYLIKE-------FVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMF 149
Cdd:MTH00110 54 LLFFSDSLSTPLLILTTWLLPLMLMASQ---HHLSKEpltrkklYITMLILLQLFLIMTFTATELIMFYILFEATLIPTL 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 150 IIIGVWGSREEKVRAAFYFFFYTLVGSLFMLICIFKIYELTGTTNYLTLLTLELPSDlQTW----LFVGFFLSLAVKIPM 225
Cdd:MTH00110 131 IIITRWGNQTERLNAGLYFLFYTLVGSLPLLVALLYIQNNLGSLNFLLLQLWAQPLP-NSWsnnlLWLACMMAFMVKMPL 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 226 IPFHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFPcASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAY 305
Cdd:MTH00110 210 YGLHLWLPKAHVEAPIAGSMVLAAILLKLGGYGMMRITIILNP-LTEFMAYPFLMLSLWGMIMTSSICLRQTDLKSLIAY 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 306 SSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANIS 385
Cdd:MTH00110 289 SSVSHMALVIVAILIQTPWSFMGATALMIAHGLTSSMLFCLANSNYERIHSRTMILARGLQTLLPLMATWWLLASLTNLA 368
|
330 340 350 360
....*....|....*....|....*....|....*....|...
gi 2086859774 386 FPSTCNFIGEFLSILSAFQYAWWAGVLACSGVILSATYALYMY 428
Cdd:MTH00110 369 LPPTINLIGELFVIMSSFSWSNITIILMGLNMLITALYSLYML 411
|
|
| ND4 |
MTH00014 |
NADH dehydrogenase subunit 4; Validated |
76-443 |
2.21e-58 |
|
NADH dehydrogenase subunit 4; Validated
Pssm-ID: 214399 [Multi-domain] Cd Length: 452 Bit Score: 199.20 E-value: 2.21e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 76 PLAFAIDGVSIFFIGLTILLIPICILVSWTSI--RYLIKEFVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMFIIIG 153
Cdd:MTH00014 52 TESLSSDMLSAPLITLTLWITALMILASFKIFqnNKAPKTFMTNILILNLILLLTFSASNLLMFYIFFEASLIPTLFLIL 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 154 VWGSREEKVRAAFYFFFYTLVGSLFMLICIFKIYeLTGTTNYLTLLTLELPSDLQT---WLFVgfFLSLAVKIPMIPFHI 230
Cdd:MTH00014 132 GWGYQPERLQASFYLMIYTVTASLPLLMSILLIF-YTNNSLSMLMSSMEPPSIYLMnlwWLIT--ILAFMVKMPLYTVHL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 231 WLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFpLFPCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAH 310
Cdd:MTH00014 209 WLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSS-LFMHINKSLSAPFSSISLVGAVITSLICIRQPDLKSLIAYSSVGH 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 311 MGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANISFPSTC 390
Cdd:MTH00014 288 MGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLSLFPTMTMWWFLLSAANMAAPPSI 367
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2086859774 391 NFIGEFLSILSAFQYAWWAGVLACSGVILSATYALYMYNRIFFGSL----SPMILYS 443
Cdd:MTH00014 368 NLLSEIMLLTSILSSSLSTAILLAITSFLAAAYSLFLYTSTQHGSPpsfmNPLNLFT 424
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
73-432 |
3.07e-56 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 193.05 E-value: 3.07e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 73 NWGP---LAFAIDGVSIFFIGLTILLipiCILVSWTSIRYLIKEFVISLFLIELLL-----IGVFTTLDILVFYVLFEGI 144
Cdd:COG0651 63 GWPApfgIVLVADRLSALFLLLTALV---ALAVLLYSIGYMRHERRGRRFYPLFLLllagmNGAFLTGDLFNLFVFFEVM 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 145 LIPMFIIIgVWGSREEKVRAAFYFFFYTLVGSLFMLICIFKIYELT--GTTNYLTLLTLELPSDLQTWLFVGFFLSLAVK 222
Cdd:COG0651 140 LLASYGLV-ALGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATgtLNMADLAARLAELDPGLLLAAFALLLVGFGIK 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 223 IPMIPFHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFP-CASEYLSPIVITLSLIAIVYGSFTTCRQNDMKR 301
Cdd:COG0651 219 AALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKR 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 302 LIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTL 381
Cdd:COG0651 299 LLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKLGGLGKRMPLTAAAFLIGAL 378
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 2086859774 382 ANISFPSTCNFIGEFLSILSAFQYAWWAGVLAcsgVILSATYALYMYNRIF 432
Cdd:COG0651 379 ALAGLPPLSGFVSKWLLLQAALEAGAWLLAAV---LLLSSLLTLAYFVRIF 426
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
36-438 |
1.11e-55 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 193.38 E-value: 1.11e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 36 SIASLVYFFFLWWTTPSHYRFSFHTSIEWLTLHQVKLNWGplafaIDGVSIFFIGLTILLIPICILVSWTSIRYliKEFV 115
Cdd:PRK06473 37 SVLLLLSLVLAFQFDPGNPNQQFTEFIPWIDSLGLSYHLG-----VDGLSLPLLVLNSLLTLIAIYSSDESIQR--PRFY 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 116 ISL-FLIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGVWGSrEEKVRAAFYFFFYTLVGSLFMLICIFKIY--ELTGT 192
Cdd:PRK06473 110 YSLlLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWGG-QRRGYAATKFLLYTAISGILILVSFLGLVwlSGASS 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 193 TNYLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIPFHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFPCASE 272
Cdd:PRK06473 189 FDYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWV 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 273 YLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYD 352
Cdd:PRK06473 269 YLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYK 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 353 RHHTRSIRYYRGVCS---SMPLFATLMLCLTLANISFPSTCNFIGEFLSILSAFQYAWWAGVLACSGVILSATYALYMYN 429
Cdd:PRK06473 349 KTGSRDVDVLRGLLNperGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIFPVQTLLCMIGTGLTAVYFLLLVN 428
|
....*....
gi 2086859774 430 RIFFGSLSP 438
Cdd:PRK06473 429 RVFFGRLTA 437
|
|
| PRK02546 |
PRK02546 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
61-434 |
3.00e-53 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 235050 [Multi-domain] Cd Length: 525 Bit Score: 187.22 E-value: 3.00e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 61 SIEWLTlhQVKLNWgplAFAIDGVSIFFIGLTILLIPICILVSWtSIRYLIKEFVISLFLIELLLIGVFTTLDILVFYVL 140
Cdd:PRK02546 70 SYSWLP--QLGLTW---SVGADGLSMPLILLTGFITTLAVLAAW-PVTFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLA 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 141 FEGILIPMFIIIGVWGSREeKVRAAFYFFFYTLVGSLFMLICIFKI--YELTGTTNYLTLLTLELPSDLQTWLFVGFFLS 218
Cdd:PRK02546 144 WELELIPVYLLLAIWGGKK-RQYAATKFILYTAGSSLFILLAALAMafYGDTPTFDMTALAAKDFGLGFQLLCYAGLLIA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 219 LAVKIPMIPFHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFPCASEYLSPIVITLSLIAIVYGSFTTCRQND 298
Cdd:PRK02546 223 YGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRN 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 299 MKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMP-LFATLML 377
Cdd:PRK02546 303 LKRKIAYSSISHMGFVLIGIGSFTDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRkMFAMWTA 382
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2086859774 378 ClTLANISFPSTCNFIGEFL-------SILSAFQYAWWAGVLACSGVILSATYALYMYNRIFFG 434
Cdd:PRK02546 383 C-SLASLALPGMSGFVAELMvfvgfatSDAYTLPFRVVVVFLAAVGVILTPIYLLSMLREIFFG 445
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
81-435 |
3.22e-45 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 165.12 E-value: 3.22e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 81 IDGVSIFFIGLTILLIPICILVSWTSIRYlIKEFVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGVWGSREe 160
Cdd:CHL00011 82 IDGLSIGPILLTGFITTLATLAAWPVTRN-SRLFYFLMLAMYSGQIGLFSSRDLLLFFIMWELELIPVYLLLSMWGGKK- 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 161 KVRAAFYFFFYTLVGSLFMLICIFKIY---ELTGTTNYLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIPFHIWLPQAHV 237
Cdd:CHL00011 160 RLYSATKFILYTAGGSIFLLIGVLGMGlygSNEPTLNFETLANQSYPVALEILFYIGFLIAYAVKLPIIPLHTWLPDTHG 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 238 EAPVAGSVVLAGILLKLGGYGFIRFSFPLFPCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLS 317
Cdd:CHL00011 240 EAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIG 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 318 IFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGE-- 395
Cdd:CHL00011 320 IGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAEli 399
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2086859774 396 -FLSILSAFQYAWWAGVL----ACSGVILSATYALYMYNRIFFGS 435
Cdd:CHL00011 400 vFFGIITSQKYLLMPKILitfvMAIGMILTPIYLLSMLRQMFYGY 444
|
|
| PRK07363 |
PRK07363 |
NADH-quinone oxidoreductase subunit M; |
6-472 |
3.89e-41 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 180945 [Multi-domain] Cd Length: 501 Bit Score: 153.71 E-value: 3.89e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 6 LFAFPILGILNV-ILTRRHQENKTKIRGLQWSIASLVY-FFFLWWTTPSHYRFSFHTSIEWLTlhQVKLNWgplAFAIDG 83
Cdd:PRK07363 5 LLWLPILGAIIIgFFPGNLPSARLRQITLVFAVLVLAWsLFLLTQFDLSDPGMQFQEYLPWNE--PLGLSY---SLGVDG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 84 VSIFFIGLTILLIPICILVSWTSIRYlIKEFVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGVWGSrEEKVR 163
Cdd:PRK07363 80 LSLPLLVLNSLLTWIAIYSIGENTER-PRLYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFYLLIAIWGG-EKRGY 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 164 AAFYFFFYTLVGSLFMLICIFKI--YELTGTTNYLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIPFHIWLPQAHVEAPV 241
Cdd:PRK07363 158 ASIKFLIYTAVSGLLVLAAFLGIvwLSGSTSFDYDAISTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASP 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 242 AGSVVLAGILLKLGGYGFIRFSFPLFPCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIFTH 321
Cdd:PRK07363 238 AVAILLGGVLAKLGTYGLLRFGLQLFPQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYSSIGHMGYILVAAAAG 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 322 SIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCS---SMPLFATLMLCLTLANISFPSTCNFIGEFLS 398
Cdd:PRK07363 318 TQLSLLGAVAQMISHGLILALLFHLVGIVERKVGTRDLDVLNGLMNpirGLPLTSALLVLAGMASAGIPGLVGFVAEFIV 397
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2086859774 399 ILSAFQYAWWAGVL--ACSGviLSATYALYMYNRIFFGSLSPMILYSREMTRREFDALLPLLVFTLLLGILPNALL 472
Cdd:PRK07363 398 FQGSFSTFPIPTLLciVASG--LTAVYFVILLNRTCFGRLDNKLAYYPKVLWSEKIPALILTALILFLGVQPNWLV 471
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
77-434 |
8.82e-41 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 152.73 E-value: 8.82e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 77 LAFAIDGVSIFFIGLTILLipiCILVSWTSIRYLIKE--FVISLFLIELL-LIGVFTTLDILVFYVLFEGILIPMFIIIG 153
Cdd:PRK08375 71 IELRADSLSALFLLVTSIL---AIAALLYAIGYGEHRqtRFYALFLLLLAgLLGALLTADLFNLFVFLEIMSLSSYALVA 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 154 VWGSREeKVRAAFYFFFYTLVGSLFMLICIFKIYELTGTTNYLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIPFHIWLP 233
Cdd:PRK08375 148 MGGDRR-ALAAARKYLIVGLIGSTFLLIGVGLLYGVTGTLNMADLAGALAENPTVVTAFGFVLLALALKAAVFPLHTWLP 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 234 QAHVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFP---CASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAH 310
Cdd:PRK08375 227 RAYPAAPPVVTALLSGLVTKVAVYALIRIYFTVFGgdfRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQ 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 311 MGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANISFPSTC 390
Cdd:PRK08375 307 MGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTS 386
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 2086859774 391 NFIGEFLSILSAFQYAWWAGVLACSGV-ILSATYALYMYNRIFFG 434
Cdd:PRK08375 387 GFVSKWYLVVGAVEAGQWLVLAVLLASsLLALLYFLRIWYRAFFG 431
|
|
| ND4 |
MTH00094 |
NADH dehydrogenase subunit 4; Provisional |
72-444 |
6.24e-37 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 177157 [Multi-domain] Cd Length: 403 Bit Score: 140.43 E-value: 6.24e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 72 LNWGPLAFAIDGVSIFFIGLTILLIPICILVSwtsirYLIKEFVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMFII 151
Cdd:MTH00094 27 YSWSGLFFFFDSFVFVLLIFMMVFILGLVLLS-----EKNFNLLILSNLLILICLLFFVSSNMLMLYMFFELSMFPILIM 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 152 IGVWGSREEKVRAAFYFFFYTLVGSLFMLICIFKIYELTGTTNyltlltlelpSDLQTWLFVGFFLSLA--VKIPMIPFH 229
Cdd:MTH00094 102 ILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYLKNFFFFSLCY----------FDFFLSWEMFFILSLSfmMKFPVYFLH 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 230 IWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFPLfpcaSEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVA 309
Cdd:MTH00094 172 LWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSL----NFVYNNFWIIFSLLGMILSSFCCVFQSDSKSLAAYSSVT 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 310 HMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANISFPST 389
Cdd:MTH00094 248 HMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFSSSMFFGLIFSLVFLSNSGVPPS 327
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2086859774 390 CNFIGEFLSILSAFQYAWWAGVLACSGVILSATYALYMYNRIFFGSLSPMILYSR 444
Cdd:MTH00094 328 LSFFSEFLIISNSFMKNKFSFFFIFFYFLVSFYYSLFLIVSSFMGKKFSNFNNFN 382
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-434 |
5.40e-34 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 134.89 E-value: 5.40e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 1 MFLVPLFAFpILGILNVILTRRhqenkTKIRGLQW--SIASLVYFFFLWWTTPSHYRFSFHT-SIEWLTLHQVKLNWGpl 77
Cdd:COG1009 4 LWLIPLLPL-LGALLAGLLGRR-----LGRRAAGWlaALAPLAAFVLSLLLFPAVLGGEVVVeLYTWIPVGSLGLDFG-- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 78 aFAIDGVSIFFIGLtILLIPICILVswTSIRYLIKEFVISLFLIELLL-----IGVFTTLDILVFYVLFEGILIPMFIII 152
Cdd:COG1009 76 -FRLDGLSLLMLLL-VTGVGLLVHI--YSIGYMSGDPGLARFFAYLLLfmaamLGLVLSDNLLLLFVFWELVGLCSYLLI 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 153 GVWGSREEKVRAAFYFFFYTLVGSLFMLICIFKIYEL---TGTTNYLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIPFH 229
Cdd:COG1009 152 GFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIagtLNFSELLAAAPTILSSPLLTLILLLLLLGAFGKSAQFPLH 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 230 IWLPQAhVEAPV-------AGSVVLAGILLklggygFIRFSfPLFpCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRL 302
Cdd:COG1009 232 FWLPDA-MEGPTpvsallhAATMVKAGVYL------LARLS-PLF-ALSPVWLTVVAIIGAITALFAALIALAQTDIKRV 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 303 IAYSSVAHMGLVTLSIfthSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLA 382
Cdd:COG1009 303 LAYSTVSQLGYMFLAL---GVGAYVAALFHLLTHAFFKALLFLGAGSVIHATGTRDIRKMGGLRKKMPITAITFLIGALS 379
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 2086859774 383 NISFPSTCNFIG--EFL-SILSAFQYAWWAGVLACSGVILSATYALYMYNRIFFG 434
Cdd:COG1009 380 LAGIPPFAGFFSkeAILeAALEAGGLGPLLLAVALLGAFLTAFYSFRLFFLVFFG 434
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
79-451 |
6.29e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 122.39 E-value: 6.29e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 79 FAIDGVSIFFIGLTILLIPICILVSWTSIRY--LIKEFVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGVWG 156
Cdd:PRK12667 78 YEVDLLGALLGLLTALVMFLILIYSYWYLEHesGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGLVAYYR 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 157 SREEKVRAAFYFFFYTLVGSLFMLICIFKIYELT--------GTTNYLTLLTLELPSDLQTWLFVGFFLSLA-----VKI 223
Cdd:PRK12667 158 DRGDAVEAAIKYALIGAVGTTLYFLALAFLYATFgtlnmadlSAKIRGLSFPLTGGLAGNPPLALGVALALAlwaftIKA 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 224 PMIPFHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFPCASEY------LSPIVITLSLIAIVYGSFTTCRQN 297
Cdd:PRK12667 238 AIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLidfraaLSPILIILGAVSAIIGALMMVVQK 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 298 DMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLML 377
Cdd:PRK12667 318 DVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDIDELAGLGRKMPIASFAFL 397
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2086859774 378 CLTLANISFPSTCNFIGEFLSILSAFQYAWWAGVLAcsgVILSATYALYMYNRIFFGSLSPMILYSREMTRREF 451
Cdd:PRK12667 398 IGALSLVGIPPLNGFFSKLLLFNALLESGFYLPALV---LLIASAISLVGYFRAWYSLFFGKPKSGEEVEHKES 468
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
37-409 |
1.49e-25 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 109.25 E-value: 1.49e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 37 IASLVYFFFLW--WTTPSHYRFSFHTSIEWLTLHQVKLNWGPLA-----FAIDGVSIFFIGLTILlipICILVSWTSIRY 109
Cdd:PRK06458 16 LASLLLFALRKrrLVATLNVLGITLTLILALWLVFTVPDAGEIFaaglwFFIDDLNVFFLALIGV---VGFLTSLYSIGY 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 110 LIKEFVI---------------SLFLIELLLigVFTTLDILVFYVLFEGILIPMFIIIGVWGSREEKvRAAFYFFFYTLV 174
Cdd:PRK06458 93 MRHEVEHgelspvtlrlyygmyQLFLFTMLL--ALTSNNLGLMWVAIEATTLSSALLVGIYRTRASL-EAAWKYIIICSV 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 175 GSLFMLICIFKIY----------ELTGTTNYLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIPFHIWLPQAHVEAPVAGS 244
Cdd:PRK06458 170 GVAFALFGTILVYanaatvmgdgEMAILWTELLKHASLLDPTLMKLAFVFLLIGFGTKVGLFPMHAWLPDAHSEAPSPVS 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 245 VVLAGILLKLGGYGFIRFS-FPLFPCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIFTHSI 323
Cdd:PRK06458 250 ALLSGVLLNVALYAVLRYYiLIDAAIGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGP 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 324 EGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGEFLSILSAF 403
Cdd:PRK06458 330 LGIFAALLHMLNHSLTKSAIFFASGNVLQKYGTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGL 409
|
....*.
gi 2086859774 404 QYAWWA 409
Cdd:PRK06458 410 ARGPLL 415
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
78-431 |
2.72e-24 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 105.20 E-value: 2.72e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 78 AFAIDGVSIFFIGLTILlipICILVSWTSIRYLIKEfviSLFLIELLLIGVFTTL---------DILVFYVLFEGILIPM 148
Cdd:COG1007 65 MFVVDGFALFFKLLILL---AALLVLLLSRDYLERR---GLLRGEFYALLLFATLgmmlmasanDLLTLFLGLELLSLSL 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 149 FIIIGVWGSREEKVRAAFYFFFYTLVGSLFMLICIFKIYELTGTTNYLTLLTLELPSDLQTWLFV---GFFLS-LAVKIP 224
Cdd:COG1007 139 YVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGIAAALAAGGANSPLLLlglVLVLAgLAFKLS 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 225 MIPFHIWLPQAHVEAPVAGSVVLAGILlKLGGYG-FIRFSFPLFPCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLI 303
Cdd:COG1007 219 AVPFHMWTPDVYEGAPTPVTAFLATAP-KIAAFAaLLRLLVEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRML 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 304 AYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVL-YDRHHTRSIRYYRGVCSSMPLFATLMLCLTLA 382
Cdd:COG1007 298 AYSSIAHAGYLLLGLAAGTPLGVSAALFYLLAYLFMNLGAFAVILLLsRKGGEAEEIEDLAGLARRSPLLALAMTIFLLS 377
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2086859774 383 NISFPSTCNFIGEFLSILSAFQYAWWagVLACSGVILSATyALYMYNRI 431
Cdd:COG1007 378 LAGIPPTAGFFGKFYVFSAAVEAGLY--WLAVIAVLNSVI-SAYYYLRV 423
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
78-431 |
3.28e-23 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 102.21 E-value: 3.28e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 78 AFAIDGVSIFFIGLTILLIPICILVSWTSIRYLIKEFVISLFLIELLLIGVF-TTLDILVFYVLFEGILIPMFIIIGVWG 156
Cdd:PRK05777 68 MLVVDGFALFLKGLILLASLLALLLARPYLEDRGRGEFYLLVLFALLGMMVMvSANDLLTLFLGLELLSLPLYALAALRR 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 157 SREEKVRAAFYFFFYTLVGSLFMLICIFKIYELTGTTNYLTLLTLELPSDLQTWLFV---GFFLS-LAVKIPMIPFHIWL 232
Cdd:PRK05777 148 DRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAKALADGSGNSLLLLfglVFLLVgLAFKLSAVPFHMWT 227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 233 PQAHVEAPVAGSVVLAGILlKLGGYG-FIRFSFPLFPCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHM 311
Cdd:PRK05777 228 PDVYEGAPTPVTAFLATAP-KIAAFAvLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHA 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 312 GLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHH-TRSIRYYRGVCSSMPLFATLMLCLTLANISFPSTC 390
Cdd:PRK05777 307 GYLLVGLAAGTAEGYSAVLFYLLAYLFMTLGAFGVISLLRRKGGeAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTA 386
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2086859774 391 NFIGEFLSILSAFQ-YAWWagvLACSGVILSATYALYmYNRI 431
Cdd:PRK05777 387 GFWGKFYVFEAAVEaGLWW---LAVIGVLNSAIGAFY-YLRV 424
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
1-436 |
3.29e-23 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 103.30 E-value: 3.29e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 1 MFLVPLFAFPILGILNVILTRRHQENKtKIRGLQWSIASLVYFFFLWWTTPSHYRFSF-HTSIEWLTLHQVKLnwgplAF 79
Cdd:PRK12646 1 MSLVYLLIAILVIMAMILLTSKRRALA-KYAGYIALVAPIISSIYFLIQIPSVAKLQYlSTSIPWMKTLDINL-----DL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 80 AIDGVSIFFiGLTILLIPICILVSWTsiRYLIKE------FVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMFIIIG 153
Cdd:PRK12646 75 RLDGLSLMF-SLIISLIGIAVFFYAT--QYLSSRkdnlprFYFYLTLFMFSMIGIVLSDNTILMYVFWELTSVSSFLLIS 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 154 VWGSREEKVRAAFYFFFYTLVGSLFML---ICIFKIYELTGTTNYLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIPFHI 230
Cdd:PRK12646 152 YWYNNGDSQFGAIQSFMITVFGGLALLvgfIMLYIMTGTNNITEILGQADHIKNHGLFIPMIFMFLLGAFTKSAQFPFHI 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 231 WLPQAhVEAPVAGSVVL-AGILLKLGGYGFIRFSfPLFPCASEYLSpIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVA 309
Cdd:PRK12646 232 WLPRA-MAAPTPVSAYLhSATMVKAGIFLLFRFT-PLLGLSNMYIY-IVTFVGLITMLFGSITALKQWDLKGILAYSTIS 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 310 HMGLVTLSI-----FTHSIEG---------LVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATL 375
Cdd:PRK12646 309 QLGMIMAMVgigggYAQHQQDaiasiyvfvLFAALFHLMNHAIFKCALFMGVGIIDHEAGTRDIRILSGMRQLFPKMNLV 388
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2086859774 376 MLCLTLANISFPSTCNFIGE---FLSILSAFQYAWWAGVL-------ACSGVILSATYALYMYNRIFFGSL 436
Cdd:PRK12646 389 MTIAALSMAGVPFLNGFLSKemfLDALTQTGQLSQFSLISmiiivfiGVIASIFTFTYALYMVKEVFWGKY 459
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
73-433 |
3.69e-23 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 102.34 E-value: 3.69e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 73 NWGP---LAFAIDGVSIFFIGLTILLIPICILVSWTSIRYLIKEFVISLFLIELLL--IGVFTTLDILVFYVLFEGILIP 147
Cdd:PRK12663 64 GWLPpfgIQFTGDSLSALMVTTASFVATAIMAYGFGDIEHSGRRYGFPPFILLLMAgvIGSFLTGDLFNLYVWFEVMLIA 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 148 MFIIIgVWGSREEKVRAAFYFFFYTLVGSLFMLICI---FKIYELTGTTNYLTLLTLELPSDLQTWLFVGFFLSLAVKIP 224
Cdd:PRK12663 144 SFVLI-TLGQEREQLRGAIKYVVLNLIGSWLFLLGIgllYGTFGTLNMAHIAMRLNDMGDTATLTTIALLFLLAFGMKAA 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 225 MIPFHiWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFPCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIA 304
Cdd:PRK12663 223 LFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLFPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAG 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 305 YSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANI 384
Cdd:PRK12663 302 YQVISSIGFILLGLALGTPAGINGAIFYLVHDMVVKTALFLIAGSLVRLTGYRSLQYLGGLYRKEPLFGALFLILIFAIG 381
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2086859774 385 SFPSTCNFIGEFLSILSAFQYAWWAGVLAcsgVILSATYALYMYNRIFF 433
Cdd:PRK12663 382 GLPPFSGFWGKVLLVQGALDNGAYILLAL---MLITSLITMYSLFRIFF 427
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
76-404 |
4.68e-23 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 102.50 E-value: 4.68e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 76 PLAFAIDGVSIFFIgltILLIPICILVSWTSIRYL----------IKEFVISLFLieLLLIGVFTTLDILVFYVLFEGIL 145
Cdd:PRK08667 70 DITFHIDRLAAFFI---ILIGLVSLCVAIYSLGYNehmssneranLLSALTALFI--LSMLGVVASANTFSFLFFWEIMA 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 146 IPMFIIIGVWGSREEKVRAAFYFFFYTLVGSLFMLICIFKIYeltGTTNYLTLLTLELPSDLQTWLFVGFFLSLAVKIPM 225
Cdd:PRK08667 145 LSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLF---IQTGSFELSPLGASAGILSLVFLLLFLGFGIKAGI 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 226 IPFHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFpCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAY 305
Cdd:PRK08667 222 IPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVL-SPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAY 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 306 SSVAHMGLVTLSIFTHSIEG-----------LVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFAT 374
Cdd:PRK08667 301 SSIENIGIILMGIGLYVIFGvygldtlallaLGGALFHSLNHALFKSLLFLTAGSVVHATGTRNIEKMGGLVKLMPYTSA 380
|
330 340 350
....*....|....*....|....*....|
gi 2086859774 375 LMLCLTLANISFPSTCNFIGEFLSILSAFQ 404
Cdd:PRK08667 381 LFLVGAVSIAALPPFNGFASELLLYESFFQ 410
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
30-397 |
8.73e-22 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 98.53 E-value: 8.73e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 30 IRGLQWSIASLVYFFFLWWTTPSHYRFSFHTSIE-WLTLHQVKLNwgplaFAIDGVSIFF--IGLTILLIPICILVSWTS 106
Cdd:PRK08668 20 LKKINEKIGVIGNALPLLFLIKLYFTLKVGTGEKlTLFFGGFKLT-----FTLTHLSWFFamISLLVIFSVAFFMVSEKT 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 107 IRYLIKEFVISLFLIELLliGVFTTLDILVFYVLFEGILIPMFIIIgVWGSREEKvRAAFYFFFYTLVGSLFMLICIFKI 186
Cdd:PRK08668 95 KNDAYFNMFALMSLAGVL--GVFLANDLLTLYIFWEIMTFSSFMMV-PMGKKESR-KASLKYFVLSAIGAYAMLYAIFLI 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 187 YELT-GTTNYLTLLTLELPSDLQTWLFVGFFLSLA--VKIPMIPFHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFI--R 261
Cdd:PRK08668 171 YAKTgTFDFADISQGLINDTSTGFALIVFLFLLAFgvAKAGIFPLHVWAPDAYSEAPQSFSAVLSGQLSKLGAYGFLlvL 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 262 FSFPLFPCASE--------YLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLM 333
Cdd:PRK08668 251 YVLPGTKLFSEfgtyrgvpLFNYILAWLGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGFAGGLFHV 330
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2086859774 334 MAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPL-FAT-LMLCLTLANIsfPSTCNFIGEFL 397
Cdd:PRK08668 331 FNHALFKGLFFLIFAAVIYRTGTTKISEMGGLIEKMPFtFAMyLVAIISLAGI--PPMSGFASKWL 394
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
106-435 |
9.01e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 91.72 E-value: 9.01e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 106 SIRYLIKEFVISLFLIELL----LIGVFTTLDILVFYVLFEGILIPMFIIIGVwGSREEKVRAAFYFFFYTLVGSLFMLI 181
Cdd:PRK12662 100 NRKEISVNKIPSFYSAFLLclggLLGILVSNDVFNIYVFLEISSISSYVLVAM-GRDKKALVAAFEYLIIGTIGATFYLI 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 182 CIFKIYELTGTTNYLTLLTLELPSDLQTWLFVG---FFLSLAVKIPMIPFHIWLPQAHVEAPVAGSVVLAGILLKLGGYG 258
Cdd:PRK12662 179 GIGFLYAITGTLNMGDMFLIIQDLPTNRAIQIGvlfIMVGLFIKAALFPFHKWLIQAYSEAPSFISVFFSGTSTKVMIYL 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 259 FIRFSFPLFPCASEYLSP----IVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMM 334
Cdd:PRK12662 259 IIRIVYDVFKANFVFTTLpfnnVFMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYGLAAAVAYIV 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 335 AHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGEFLSILSAFQYAWWAGVLAC 414
Cdd:PRK12662 339 NHSIVKSALFMVSGSISYHFGTTKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKSNAWIGLVVL 418
|
330 340
....*....|....*....|..
gi 2086859774 415 S-GVILSATYALYMYNRIFFGS 435
Cdd:PRK12662 419 LvGSGLSVIYVWKIVEALYFES 440
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
72-404 |
2.86e-19 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 91.10 E-value: 2.86e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 72 LNWGPLAFAIDGVSIFFIGLTILLIPICILVSWTSIR-YLIKEFVISLFLIELLL---IGVFTTLDILVFYVLFEGILIP 147
Cdd:PRK06521 69 LPFLPFHLRLDALSAFFLLVISLLGAAASLYSLGYFReYEGKGPGAMGFFYNLFLasmVLVLLADDAFSFLVAWETMSLS 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 148 MFIIIGVWGSREEKVRAAFYFFFYTLVGSLFMLICIFKIYELTGTTNYLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIP 227
Cdd:PRK06521 149 SWFLVIANHREAEIRRAGFLYLLMAHAGALAILLAFGLLARESGSYDFAAMRAAHLSPFWASLVFLLALFGFGAKAGLVP 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 228 FHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFPCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSS 307
Cdd:PRK06521 229 LHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILRVVFDLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYST 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 308 VAHMGLVTLS-----IF------THSIEGLVASLFLMMAHGFVSSGLFMGV-TVLYdRHHTRSIRYYRGVCSSMPLFATL 375
Cdd:PRK06521 309 IENIGIIFVGlglamVFiaygmpLLAALALTAALYHLLNHALFKSLLFLGAgAVLH-ATGTRDMEKLGGLIRRMPWTAWA 387
|
330 340
....*....|....*....|....*....
gi 2086859774 376 MLCLTLANISFPSTCNFIGEFLSILSAFQ 404
Cdd:PRK06521 388 FLIGCLAISALPPLNGFVSEWLLLQSLLS 416
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
79-469 |
8.93e-19 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 89.00 E-value: 8.93e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 79 FAIDGVSIF--FIGLTILLIPICILVSWTSIRYLIKEFVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGVWG 156
Cdd:PRK08376 86 WEVDLFGAFmaLIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRN 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 157 SREEKVRAAFYFFFYTLVGSLFMLICIFKIYEL--TGTTNYLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIPFHIWLPQ 234
Cdd:PRK08376 166 DTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQygTLNMAYLAVKMSENPTVVAKIALALFIAGLAMKSGAVPVHMWLPD 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 235 AHVEAPVAGSVVLagILLKLGG-YGFIRFSFPLFPCA--SEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHM 311
Cdd:PRK08376 246 AYPAAPSSISAML--LVIKQAGlYALARVLFSIYGPAinLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQI 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 312 G---------LVTLSIFTHSIEGLVA---SLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCL 379
Cdd:PRK08376 324 GymllglgvgLAALGDPAMASYGEIAlagGIYHIVNHALYKALLFLTAGAVIYETGTRNLNELGGLARTMPKTTIAFLIG 403
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 380 TLANISFPSTCNFIGEFLSILSAFQYAWWAGVLACSGVILSATYALYMYNRIFFGSLSPMILYSREMTRREFDALLPLLV 459
Cdd:PRK08376 404 AAAIVGLPPFNGFASKWLIYESSALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVMNVKEPPKPMLVPMLILAI 483
|
410
....*....|
gi 2086859774 460 FTLLLGILPN 469
Cdd:PRK08376 484 AIIGMGLFPW 493
|
|
| ND4 |
MTH00062 |
NADH dehydrogenase subunit 4; Provisional |
79-450 |
9.87e-19 |
|
NADH dehydrogenase subunit 4; Provisional
Pssm-ID: 214413 [Multi-domain] Cd Length: 417 Bit Score: 88.06 E-value: 9.87e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 79 FAIDGVSIFFIGLTiLLIPICILVSWTSIRYLIKEFVISLFLIELLLigVFTTLDILVFYVLFEGILIPMFIIIGVWGSR 158
Cdd:MTH00062 41 FIFDSLSFYLILLV-LFLGLYSQVMFYNLLSGVSRFFLFLSLIFSIL--CFCVNNSLLFWFFYELSIIPLLYLLFSESPY 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 159 EEKVRAAFYFFFYTLVGSLFMLICIFKIyelTGTTNYLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIPFHIWLPQAHVE 238
Cdd:MTH00062 118 SERYLASWYFLGYLLLTSLPLLLCLLYL---SLVNGSFNFSDWGSDDSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAE 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 239 APVAGSVVLAGILLKLGGYGFIRFSFPLFpcaSEYLSPIVITLSLIAIVYgSFTTCRQNDMKRLIAYSSVAHMGLVTLSI 318
Cdd:MTH00062 195 ASSPVSIFLSGYIMKLGLLGVYRFCGFIF---SGSFLGYLFLCCLFSVFF-LITACSELDGKRWLAFLSLSHILVPVLGL 270
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 319 FTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGEfls 398
Cdd:MTH00062 271 FVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGINGSLVLRVIVVFSFLSLCSFPPTIQFFCE--- 347
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 2086859774 399 ilsafqyawwAGVLACSGVILSATYALYMYnrIFFGSLSPMILYSREMTRRE 450
Cdd:MTH00062 348 ----------VFLVSSSFGVLVYLLFWCFY--LFFGGLVPLILLGHLLIRSE 387
|
|
| 2a6301s01 |
TIGR00940 |
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ... |
10-438 |
1.50e-18 |
|
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273353 [Multi-domain] Cd Length: 793 Bit Score: 88.75 E-value: 1.50e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 10 PILGILNVILTRRHQENKTKIRGLQWSIASLVYFFFLWWTTPSHYrfSFHTSIEWLTlhQVKLNWgplAFAIDGVSIFFi 89
Cdd:TIGR00940 9 PFAASLIPILYPSDQRIHIGWFVLAIPLVCFLYTLGLYPYTASGG--VLHYTIDWVP--ELGLNF---TLYMDGLALLF- 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 90 glTILLIPICILVSWTSIRYLIKEFVISLFLIELLL-----IGVFTTLDILVFYVLFEGILIPMFIIIGVWGSREEKVRA 164
Cdd:TIGR00940 81 --SLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAfmgamLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYG 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 165 AFYFFFYTLVGSLFML---ICIFKIYELTGTTNYLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIPFHIWLPQAhVEAPV 241
Cdd:TIGR00940 159 AQKSLTITVFGGLAMLgglILLGKITGSFSIDAVIASADAIRNSPLFGTAMVLVLLGAFTKSAQFPFHIWLPDA-MEAPT 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 242 AGSVVL-AGILLKLGGYGFIRFSfPLFPCASEYLSpIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIFT 320
Cdd:TIGR00940 238 PVSAYLhSATMVKAGLYLLARFT-PVFAGTEAWFW-IVGLAGLITLLWGSYFAIFQQDLKGILAFSTISQLGLIMVLLGL 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 321 HSIE-------------GLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANISFP 387
Cdd:TIGR00940 316 GSPSyhyqgddskiyalAAVAAVFHLINHATFKGSLFMAAGIIDHETGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVP 395
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2086859774 388 STCNFIGE-----------FLSILSAFQYAWWAGVLACSGVILSATYALYMYNRIFFGSLSP 438
Cdd:TIGR00940 396 PFNGFLSKemffaeaitahLVNPFDTVTLGYLFPYVATVASVFTFVYSLRFIHGVFFGRPKP 457
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
88-434 |
2.56e-18 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 87.51 E-value: 2.56e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 88 FIGLTILLIPI-CILVSWTSIRYLIKEFVISLFLIELLLI----GVFTTLDILVFYVLFEGILIPMFIIIGvWGSREEKV 162
Cdd:PRK08377 79 FAALFVLIIAIvSFIMSIFSLKAVEVEPIDKYAMLFLLLMlgatGMIATGDIFNLFVFMEITAITAYALTA-YNKTGEAA 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 163 RAAFYFFFYTLVGSLFMLICIFKIYELTGTTNYLTLLTLELPSDlQTWLFVGF---FLSLAVKIPMIPFHIWLPQAHVEA 239
Cdd:PRK08377 158 EASMKYIVLGGIGSSFFLIGVALIYGATGTLNMAHIAQLAGTID-PTVAQVGLallIFGLAVEAELFPLNAWAPDAYQAA 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 240 PVAGSVVLAGILLKLGGYGFIRFSFPLFPCAS-EYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSI 318
Cdd:PRK08377 237 PHPITVMFSAFVVKAGLYAMARILYLMQNANGwSSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALAL 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 319 FTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGEFLS 398
Cdd:PRK08377 317 ALGTQAGVDAGVFHMINHAIVKALLFLAVGYVGITLGGTEIEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRI 396
|
330 340 350
....*....|....*....|....*....|....*..
gi 2086859774 399 ILSAFQYAW-WAGVLACSGVILSATYALYMYNRIFFG 434
Cdd:PRK08377 397 ILAGLSAGYtWPVALVLGASVVEAVYYFRLIHTMWFK 433
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
212-432 |
4.60e-18 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 86.73 E-value: 4.60e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 212 FVGFFLSLAVKIPMIPFHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFPC-ASEYLSPIVITLSLIAIVYGS 290
Cdd:PRK08676 209 FLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSgAAEQFSNVLIGLGIFSIAVAA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 291 FTTCRQNDMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMP 370
Cdd:PRK08676 289 FSMLSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLVKSGLFFSAGILHRQYRSDRFDRIFDVFRLQP 368
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2086859774 371 LFATLMLCLTLANISFPSTCNFIGEFLSILSAFQYAWWAGVLACSGVILSATYALYMYNRIF 432
Cdd:PRK08676 369 VAAWGVILGSAAIIGMPPFPLFLSKFFILLQLGGISVWLVLAVLLLLLLAASSFAIFLLKAF 430
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
77-420 |
5.16e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 83.46 E-value: 5.16e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 77 LAFAIDGVSIFFIGLTILLIPICILVSWTSIRylikefviSLFLIELLLI------GVFTTLDILVFYVLFEGILIPMFI 150
Cdd:PRK07234 61 VTLRADALSGYFILTNALVTLAVIFYCWESAK--------TRFFYAQLLIlhgsvnAAFVCADLISLYVALEVLSIATFL 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 151 IIgVWGSREEKVRAAFYFFFYTLVGSLFMLICIFKIYELTGTTNYLTLLTLelPSDLQTWLFVGfflsLAVKIPMIPFHI 230
Cdd:PRK07234 133 LV-AYPRTDRAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGLATA--DPEAFALIALG----LLVKGGIFVSGL 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 231 WLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFplfpcASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAH 310
Cdd:PRK07234 206 WLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCAL-----DVPGLDLIVRIFGVGTALLGVLFALLEKDLKRMLAFSTISQ 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 311 MGLVTLSifthsieGLVASlFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLfatLMLCLTLAniSFPSTC 390
Cdd:PRK07234 281 LGFILAA-------PLVGG-LYALAHGLVKSTLFLCAGALPSRNFTELISQMLGIGKWIPL---TMASFSIA--GFPLLA 347
|
330 340 350
....*....|....*....|....*....|
gi 2086859774 391 NFIGEFLSILSAFQYAWWAGVLACSGVILS 420
Cdd:PRK07234 348 GFVSKVLTLKNLLPWQAIALNLAAVGTAAS 377
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
123-420 |
8.84e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 82.71 E-value: 8.84e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 123 LLLIGV---FTTLDILVFYVLFEGILIPMFIIIGVWGSrEEKVRAAFYFFFYTLVGSLFMLICIFKIYELT--GTTNYLT 197
Cdd:PRK12665 119 ILVAGVsnaFLAGDLFNLYVGFEILLVASYVLLTLGAT-AARVRAGVTYVMVSMVSSLLFLIGIALVYAATgtLNMADLA 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 198 LLTLELPSDLQTWLFVGFFLSLAVKIPMIPFHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFPcaSEYLSPI 277
Cdd:PRK12665 198 VRLDELPSGTRTALFAVLLVAFGIKAAVFPLSFWLPDSYPTAPAPVTAVFAGLLTKVGVYAIIRTHTLLFP--GGGLDTL 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 278 VITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTR 357
Cdd:PRK12665 276 LMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAGLSGAIYYVAHHITVQTTLFLVVGLIERQAGSS 355
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2086859774 358 SIRYYRGVCSSMPLFATLML--CLTLANIsfPSTCNFIGEFLSILSAFQYA-WWAGVLACSGVILS 420
Cdd:PRK12665 356 SLRRLGGLAKASPLLAVLFFvpALNLGGI--PPFSGFIGKVALLEAGAEDGtWLAWALVAGGVVTS 419
|
|
| NDH_I_N |
TIGR01770 |
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ... |
84-433 |
1.24e-16 |
|
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]
Pssm-ID: 273795 [Multi-domain] Cd Length: 468 Bit Score: 81.92 E-value: 1.24e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 84 VSIFFIGLTILLIPICIlvSWTSIRYLIKEFVISLFLIELLLIGVF-TTLDILVFYVLFEGILIPMFIIIGVWGSREEKV 162
Cdd:TIGR01770 75 IKLILLLSTLLTFFFAL--SYLSKEKINKFEFYILLLFALLGIFLLvSSNDLLSIYLGLELQSLCFYVLAGLKRKSRFST 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 163 RAAFYFFFYTLVGSLFMLICIFKIYELTGTTNYLTLLTLELPSDLQTWLF---VGFFLS-LAVKIPMIPFHIWLPQAHVE 238
Cdd:TIGR01770 153 EAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNISLLllgIVLILVgLLFKLSAVPFHMWVPDVYEG 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 239 APVAGSVVLAgILLKLGGYG-FIRFSFPLFPCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLS 317
Cdd:TIGR01770 233 APTPVTAFFS-IVPKIAIFAvFLRLFLYILFGFSEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSISHVGYILIG 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 318 IFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRY--YRGVCSSMPLFATLMLCLTLANISFPSTCNFIGE 395
Cdd:TIGR01770 312 LLAGTLEGIKAVLFYIFIYALMSLGAFGVLSLLRSYKDEWIEYIsdFAGLFKTNPILAILILIFMFSLAGIPPLAGFFGK 391
|
330 340 350
....*....|....*....|....*....|....*....
gi 2086859774 396 FLSILSAFQ-YAWWAGVLACSGVILSATYALYMYNRIFF 433
Cdd:TIGR01770 392 FYVFFALLKsGLYWLAVIAVLTSVIGAFYYLRVVKVMYF 430
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
213-436 |
5.12e-14 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 74.69 E-value: 5.12e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 213 VGFFLSLAV--KIPMIPFHIWLPQAHVEA-PV-----AGSVVLAGILLKLggygfiRFSfPLFPCASEYlSPIVITLSLI 284
Cdd:PRK12650 210 VAVLIAVAAftKSAQFPFHFWLPEAMAAItPVsaflhAAAVVKAGIYLLL------RFS-PVFHDVAVW-NWLLIIVGMI 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 285 AIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRG 364
Cdd:PRK12650 282 TALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFALTAAVVHTLAHALFKSSLFMLIGVVDHQAGTRDIRRLGS 361
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2086859774 365 VCSSMPLFATLMLCLTLANISFPSTCNFIGEfLSILSAFQYA---WWAGVLACSGVILSATYALYMYNRIFFGSL 436
Cdd:PRK12650 362 LWRRMPFTFVSVTIAALSMAAVPPLFGFVSK-EGMLTAFLEApggNAGVVLLLVGAALGAVFTFAYSARLVLGAF 435
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
134-438 |
1.90e-13 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 72.31 E-value: 1.90e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 134 ILVFYVLFEGILIPMFIIIGVWGSrEEKVRAAFYFFFYTLVGSLFMLICIFKIYelTGTTNYLTLLTLELPSDLQTWLFV 213
Cdd:PRK06525 135 LLGLLLFFEITGLCSWALISYYQS-PKALRSALKALLITHIGSLGLYLAAATLF--LQTGTFALSALSGLHGSLKYLVFL 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 214 GFFLSLAVKIPMIPFHIWLPQAhVEAPVAGSVVL-AGILLKLGGYGFIRF--SFPLFPCASEYLSPIVITLSLIaivYGS 290
Cdd:PRK06525 212 GILFAAWGKSAQLPFYSWLPDA-MEAPTPASAYLhAASMVKVGVYIFARAiqSMGPIPHVIGYVGAVMAIVTLL---YGF 287
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 291 FTTCRQNDMKRLIAYSSVAHMGL----VTLSIFTHSiEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVC 366
Cdd:PRK06525 288 LMYLPQQDMKRLLAYSTITQLGYmffgLSLAILGSR-LALEGSIAYIFNHAFAKSLFFLVAGALSYSCGTRLLPRLRGVL 366
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2086859774 367 SSMPLFATLMLCLTLANISFPSTCNFIGEFLSILSAF---QYAWW---AGVLACSGVILSATYALYMYNRIFFGSLSP 438
Cdd:PRK06525 367 KKLPLVGVGFCVAALAITGVPPFNGFFSKFPIFAAGFelsVEYWIllpAMVLLLIESVASFAWFLRWFGRVVFGEPSE 444
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
126-421 |
1.94e-13 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 72.62 E-value: 1.94e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 126 IGVFTTLDILVFYVLFEGILIPMFIIigVWGSR-EEKVRAAF-YFFFYTLVGSLFMLICIFKIYELTGTTNYLTLLtlel 203
Cdd:PRK12668 107 LGAVFAGDLLTLFVFWELMAFTSTFL--VWARGtKAAVRAGFrYLLVHVLGGVLLLAGILLHYAETGSFAFGAIAG---- 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 204 PSDLQTWL-FVGFflslAVKIPMIPFHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRfSFPLFpcaseylsPIVITLS 282
Cdd:PRK12668 181 LGGTAAWLiLIGF----GVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALAR-AFPGT--------ELLIYIG 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 283 LIAIVYGSFTTCRQNDMKRLIAYSSVAHMG--LVTLSIFTH-SIEGLVASLFlmmAHGFVSSGLFMGVTVLYDRHHTRSI 359
Cdd:PRK12668 248 AAMAVYGVFFALLENDLRRLLSYHIVSQVGymVAGIGIGTAlAINGAVAHAF---NHILYKGLLFMSAGAVLYRTGTEKL 324
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2086859774 360 RYYRGVCSSMPLfaTLMLCLTLA-NIS-FPSTCNFIGEFLSILSAFQ----YAWWAGVLACSGVILSA 421
Cdd:PRK12668 325 TELGGLYRSMPL--TALFCLVGAlSISaFPLFSGFVSKSMIISAAGEdhyvWVWLLLLLASAGTFLHF 390
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
119-437 |
2.05e-13 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 72.16 E-value: 2.05e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 119 FLIELLLIGVFTTL--DILVFYVLFEGILIPMFIIIGVWGSREEKVRAAFYFFFYTLVGSLFMLICIFKIYELTGTTNYL 196
Cdd:PRK06589 121 FFNLTILIGVLIALssDLFTMFVCYELLTISTAFLIGHTRNNISLSGGYKYLKILMISALLLFLPAVILIYTKTGNLDFV 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 197 TLLTLELPSDLQTWLFvgfFLSLAVKIPMIPFHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFPCAseYLSP 276
Cdd:PRK06589 201 SGGLFSKNQSIILLLM---FIYGIAKTAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILLYIFGLS--YLQR 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 277 IV------ITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVL 350
Cdd:PRK06589 276 IFaefnwlIFIPIVSIFYSSLKALKTDNIKKILAYSTISQLSLALLSAFILTPKALGAAILHLVSHSFAKICLFYSMGSI 355
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 351 YDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGEFLSILSAF-QYAWWAGVLA----CSGVILSATYAL 425
Cdd:PRK06589 356 YSLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISKFLILLAASeQNQPWLSIIVmlvvIASSILSALYLL 435
|
330
....*....|..
gi 2086859774 426 YMYNRIFFGSLS 437
Cdd:PRK06589 436 KILSSIYKPSLS 447
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
81-438 |
1.63e-12 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 69.95 E-value: 1.63e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 81 IDGVSIFFiglTILLIPICILVSWTSIRYLIKE------FVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGV 154
Cdd:PRK12645 76 VDGLSLLF---ALLITGIGSLVVLYSIYYLSKKkeqlgnFYVYLLLFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISY 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 155 WGSREEKVRAAFYFFFYTLVGSLFML---ICIFKIYELTGTTNYLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIPFHIW 231
Cdd:PRK12645 153 WYEREASRYGAQKSMLITVFGGLSMLggfILLYIMTGSFSIREMIANADEIQNSPLFIPAMILILLGAFTKSAQFPFYIW 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 232 LPQAhVEAPVAGSVVL-AGILLKLGGYGFIRFSfPLFPCASEYLSPIVITlSLIAIVYGSFTTCRQNDMKRLIAYSSVAH 310
Cdd:PRK12645 233 LPDA-MEAPTPVSAYLhSATMVKAGIYLVARFT-PIFAGSQVWFWTVTLV-GLITLFWGSLNAVKQTDLKGILAFSTVSQ 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 311 MGLVT--LSI------FTHSIEGL-----VASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLML 377
Cdd:PRK12645 310 LGLIMslLGIgaaslhYQGDDSKIyaaaiTAAIFHLINHATFKGSLFMIVGIVDHETGTRDIRKLGGLMTIMPITFTIAL 389
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2086859774 378 CLTLANISFPSTCNFIGE---FLSILSAFQYAWWAG--------VLACSGVILSATYALYMYNRIFFGSLSP 438
Cdd:PRK12645 390 IGALSMAGLPPFNGFLSKemfFESMLNATEANLFSLdtwgvlfpVIAWVASVFTFVYSIIFIFKTFFGKYKP 461
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
227-434 |
3.34e-12 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 69.06 E-value: 3.34e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 227 PFHIWLPQAhVEAPVAGSVVL-------AGILLklggygFIRFsFPLFPCASEYLSpIVITLSLIAIVYGSFTTCRQNDM 299
Cdd:PRK12648 225 PFHFWLPHA-MAAPTPVSAYLhsatmvkAGVFL------LARL-WPVLAGTEEWFW-IVGGAGLITLLLGAYFALFQHDL 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 300 KRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLML-- 377
Cdd:PRK12648 296 KGLLAYSTISHLGLITLLLGLGSPLAAVAAIFHIINHATFKASLFMAAGIIDHETGTRDMRRLSGLRRLMPITATLAMva 375
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2086859774 378 CLTLANI----SFPSTCNFIGEFLSILSAFQYAWWAGVLACSGVILSATYALYMYNRIFFG 434
Cdd:PRK12648 376 AAAMAGVpllnGFLSKEMFFAETLDTHLLGSLDWLLPVAATLAGAFSVAYSLRFIHDVFFG 436
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
1-425 |
1.46e-11 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 66.64 E-value: 1.46e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 1 MFLVPLFaFPILG-ILNVILTRRHQENKTKIRGLQWSIASLVYFFFLWWTTPSHYRFSFHTSIEWLTLHQVKLNWGplaF 79
Cdd:MTH00020 1 MYLLVLF-LPLLGaLLSGLFGRKIGEKGAGILTSSCLIISLSWSFLIFYEILFNSSTTYIKLWRWLDSDLLTVYFG---L 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 80 AIDGVSIFFIgltILLIPICILVSWTSIRYL-----IKEFVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGV 154
Cdd:MTH00020 77 QFDGLVAIML---LVVTTVSTLVHIFSTAYMrgdphIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWEGVGLCSYLLINF 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 155 WGSREEKVRAAFYFFFYTLVGSLFMLICIFKIYELTGTT--NYLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIPFHIWL 232
Cdd:MTH00020 154 WLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLdfSSVFNMVVSAPSSDITLICLFLFIGAVGKSAQLGLHTWL 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 233 PQAhVEAPV-------AGSVVLAGILLklggygFIRFSfPLFPCASEYLSPIVITLSLIAIVYGSFTTCrQNDMKRLIAY 305
Cdd:MTH00020 234 PDA-MEGPTpvsalihAATMVTAGVFL------LIRSS-PLFEQAPLALIIVTIVGSLTVFFAATVGLV-QNDLKKVIAY 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 306 SSVAHMG--LVTLSIFTHSIeglvaSLFLMMAHGFVSSGLFMGV-TVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLA 382
Cdd:MTH00020 305 STCSQLGymVVACGLSHYSI-----SLFHLMNHAFFKALLFLSAgSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLS 379
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 2086859774 383 NISFPSTCNFIGEFLSI-LSAFQY----AWWagvLACSGVILSATYAL 425
Cdd:MTH00020 380 LMGFPYLTGFYSKDLILeLAFGQYylifAYW---LGCFSALLTAFYSI 424
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
125-426 |
1.56e-11 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 66.87 E-value: 1.56e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 125 LIGVFTTLDILVFYVLFEGILIPMFIIIGVWGSREEKVRAAFYFFFYTLVGSLFMLICIFKIYELTGTTNYLTLLTLELP 204
Cdd:PRK12644 119 MFGLVTSDNLLLLYVFWELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLADPPT 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 205 SDLQTwlfVGFFLSLA---VKIPMIPFHIWLPQAhVEAPVAGSVVL-AGILLKLGGYGFIRFSfPLFPCASEYLsPIVIT 280
Cdd:PRK12644 199 GPAVS---VAVVLILVgalSKSAIVPFHFWLPGA-MAAPTPVSAYLhAAAMVKAGIYLVARLA-PGFADVPVWR-PTVLV 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 281 LSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIR 360
Cdd:PRK12644 273 LGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGTRDAALAGLAMLLAHALFKAALFLVVGIIDHSTGTRDIR 352
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2086859774 361 YYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGEfLSILSAFQY-------AWWAGVLACSGVILSATYALY 426
Cdd:PRK12644 353 KLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAK-EAALEAVLHdgalgpaGPVVLAGIVLGSILTVAYSLR 424
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
60-439 |
2.06e-11 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 66.13 E-value: 2.06e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 60 TSIEWLTLHQVKLNwgpLAFAIDGVSIFFIGLtILLIPICILVswTSIRYLIKEFVISLFLIeLLLIGVFTTLdILVF-- 137
Cdd:MTH00211 59 TNWSWINLGLFSLN---LSFKFDFYSIFFTSV-ALYVTWSILE--FSLWYMSSEPNINRFFK-YLLLFLIFML-ILVSan 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 138 --YVLF---EGILIPMFIIIGVWGSREEKVRAAFYFFFYTLVGSLFMLICIFKIyelTGTTNYLTLLTLELPSDLQTWLF 212
Cdd:MTH00211 131 nlFQLFigwEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLSMVWL---LLNLNSWEISQLFILNLDLTLFL 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 213 VGFFLSLAVKIPMIPFHIWLPQAhVEAPVAGS-------VVLAGILLklggygFIRFSfPLFPCASEYLSpIVITLSLIA 285
Cdd:MTH00211 208 LGLLLAAMGKSAQFGFHPWLPSA-MEGPTPVSallhsstMVVAGVFL------LIRLS-PLFQNNQLILG-AVLLLGALT 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 286 IVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIfthSIEGLVASLFLMMAHGFVSSGLFMGVTVL-YDRHHTRSIRYYRG 364
Cdd:MTH00211 279 MLFGALCALTQNDIKKIVAFSTTSQLGLMMVTL---GLNQPQLAFLHICTHAFFKAMLFMCSGSIiHGLNNEQDIRKMGG 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 365 VCSSMPLFATLMLCLTLANISFPstcnFIGEFLS---ILSAFQYAW---WAGVLACSGVILSATYALYMYNRIF-----F 433
Cdd:MTH00211 356 LSKNLPFTSSCLFLGSLALMGFP----FLSGFFSkdlILESMNGSYlnaWALLLTLLATSLTAAYSFRLIFLSLggyprF 431
|
....*.
gi 2086859774 434 GSLSPM 439
Cdd:MTH00211 432 LSLSPI 437
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
210-404 |
1.68e-10 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 63.31 E-value: 1.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 210 WLF--VGFFLSLAVkipmIPFHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFpLFPCASEYLSPIVITLSLIAIV 287
Cdd:PRK08042 183 WLLgvIGFGLLAGI----IPLHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLSL-LGGNAPLWWGVALLVLGMITAF 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 288 YGSFTTCRQNDMKRLIAYSSVAHMGLVTLSI--FTHSIE---------GLVASLFLMMAHGFVSSGLFMGVTVLYDRHHT 356
Cdd:PRK08042 258 VGGLYALMEHNIQRLLAYHTLENIGIILLGLgaGVTGIAleqpalialGLVGGLYHLLNHSLFKSVLFLGAGSVWFRTGH 337
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2086859774 357 RSIRYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGEFLSILSAFQ 404
Cdd:PRK08042 338 RDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFFK 385
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
135-434 |
3.36e-10 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 62.48 E-value: 3.36e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 135 LVFYVLFEGILIPMFIIIGVWGSREEKVRAAFYFFFYTLVGSLFMLICIFKIYELT-----GTTNYLTLLTLELPSDLQT 209
Cdd:PRK06590 138 LQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFgslnyDEVFAAAPQFFGLGWSALT 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 210 WLfvGFFLSLAV--KIPMIPFHIWLPQAhVEAPV-------AGSVVLAGILLklggygfIRFSFPLFPCASEYLSPIVIt 280
Cdd:PRK06590 218 LI--CLLLFIGAmgKSAQFPLHTWLPDA-MEGPTpvsalihAATMVTAGVYL-------VARMSPLFELSPEALLFVAI- 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 281 LSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIfthSIEGLVASLFLMMAHGFVSSGLFMGV-TVLYDRHHTRSI 359
Cdd:PRK06590 287 VGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLAL---GVGAYAAAIFHLMTHAFFKALLFLGAgSVIHAMHHEQDI 363
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2086859774 360 RYYRGVCSSMPLFATLMLCLTLANISFPSTCNFIGEFLSILSAF----QYAWWAGVLacsGVILSATYALYMYNRIFFG 434
Cdd:PRK06590 364 RKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFanghINLFVAGLV---GAFLTAFYSFRLIFLVFHG 439
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
125-371 |
4.67e-10 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 62.15 E-value: 4.67e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 125 LIGVFTTLDILVFYVLFEGILIPMFIIIGVWGSREEKVRAAFYFFFYTLVGSLFMLI------CIFKIYELTGTTNYLTL 198
Cdd:PRK12649 124 MIGMVFSGNTIQLFIFWELTSITSFMLIGYWRHRPESVYGATKSLLITAGGGLFMFAgflllhVITGTYDIATILQDSEL 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 199 LTLELPSDLQTWLFVGFFLSLAVKIPMIPFHIWLPQAhVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFPCASEYLSpIV 278
Cdd:PRK12649 204 IENIKGHPLFLITLILIFIGAAAKSAQGPFYIWLPNA-MEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFI-LV 281
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 279 ITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMG-LVTLSIFTHSIE---GLVASLFLMMAHGFVSSGLFMGVTVLYDRH 354
Cdd:PRK12649 282 SGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAyLMTMYGYTTYHEpglGVAAATFHLLNHATFKACLFLVAGIVAHEA 361
|
250
....*....|....*..
gi 2086859774 355 HTRSIRYYRGVCSSMPL 371
Cdd:PRK12649 362 ATRDIRKLGGLRKEMPI 378
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
218-410 |
6.89e-10 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 61.22 E-value: 6.89e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 218 SLAVKIPMIPFHIWLPQAHVEAPVAgSVVLAGILLKLGGYGF-IRFSFPLFPCASEYLSPIVITLSLIAIVYGSFTTCRQ 296
Cdd:PRK02504 219 GIAFKISAVPFHQWTPDVYEGSPTP-VVAFLSVGSKAAGFALaIRLLVTAFPSFDEQWKLLFTALAILSMVLGNVVALAQ 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 297 NDMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLfatLM 376
Cdd:PRK02504 298 TSMKRMLAYSSIGQAGFVMIGLVAGTEAGYASMVFYLLAYLFMNLGAFACVILFSLRTGTDQISDYAGLYQKDPL---LT 374
|
170 180 190
....*....|....*....|....*....|....
gi 2086859774 377 LCLTLANISFPSTCNFIGEFLSIlsafqYAWWAG 410
Cdd:PRK02504 375 LGLSLCLLSLGGIPPLAGFFGKI-----YLFWAG 403
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
89-392 |
5.51e-09 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 58.43 E-value: 5.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 89 IGLTILLI--PICILVSWTSIRYL-----IKEFVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGVWGSREEK 161
Cdd:MTH00032 81 LSVTMLLVisSISTLVHIYSTSYMsddphVPRFLCYLSLFTFLMMVLVTSDNYLQLFIGWEGVGVCSYLLVAFWTTRIQA 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 162 VRAAFYFFFYTLVGSLFMLICIFKIYELTGTTNYL---------------TLLTLELPSDLQTWLFVGFFLSLAV--KIP 224
Cdd:MTH00032 161 NKAAIKAIVVNRVGDVGVILGMVLIYKTIGSLDFLtfnggsvgsgimdrgYYGGGAYESPLAPFAIIGILLLIGCigKSA 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 225 MIPFHIWLPQAhVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFPCASEYLSPIVITLSLIAIvYGSFTTCRQNDMKRLIA 304
Cdd:MTH00032 241 QLGLHTWLPDA-MEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAF-FAATVGLVQNDLKKVIA 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 305 YSSVAHMGLVTLSIfthSIEGL-VASLFLMMAHGFVSSGLFM--GVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTL 381
Cdd:MTH00032 319 YSTCSQLGYMVLII---GIEGShNVGLFHLVNHAFFKALLFLsaGSVIHSTTVDEQDMRKMGGLIHSIPFTYTMMLIGSF 395
|
330
....*....|.
gi 2086859774 382 ANISFPSTCNF 392
Cdd:MTH00032 396 SIMGLPYLTGF 406
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
77-421 |
1.38e-08 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 57.24 E-value: 1.38e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 77 LAFAIDGVSIFFiGLTILLIPICILVSWTSI----RYLIKEFV-ISLFLIELLliGVFTTLDILVFYVLFEGILIPMFII 151
Cdd:PRK12647 58 LSFLLDGLSLTF-ALLITGIGTLIVLYAGGYlkghPDLGRFYSyILLFMASML--GLVLSDNLITLFVFWELTSITSFLL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 152 IGVWGSREEKVRAAFYFFFYTLVGSLFML---ICIFKIYELTGTTNYLTLLTLELPSDLQTWLFVGFFLSLAVKIPMIPF 228
Cdd:PRK12647 135 IGFNHEREAARRAALQALLVTGGGGLALLaglILLGNVTGTYSLSELLASGDVIREHPLYLAILLLVLGGAFTKSAQFPF 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 229 HIWLPQAhVEAPVAGSVVL-AGILLKLGGYGFIRFSFPLfpCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSS 307
Cdd:PRK12647 215 HFWLPNA-MEAPTPVSAYLhSATMVKAGIYLLARLNPVL--GGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYST 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 308 VAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPL--FATLMLCLTLANIs 385
Cdd:PRK12647 292 VSALGTLVMLLGLGSELAIKAAVLFLVAHSLYKGALFMVAGIIDHETGTRDITKLGGLRRAMPItaAAALLAALSMAGL- 370
|
330 340 350
....*....|....*....|....*....|....*.
gi 2086859774 386 fPSTCNFIGEFLSILSAFQYAWWAGVLACSGVILSA 421
Cdd:PRK12647 371 -PPLFGFLAKELIYEALLEAPLWSLILTVAAVLGNA 405
|
|
| PRK06459 |
PRK06459 |
hydrogenase 4 subunit B; Validated |
100-407 |
2.22e-08 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235806 [Multi-domain] Cd Length: 585 Bit Score: 56.34 E-value: 2.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 100 ILVSWTSIRY-LIKEFVISLFLIELL-LIGVFTTLDILVFYVLFEGILIPMFIIIGVWGSreeKVRAAFYFFFYTLVgSL 177
Cdd:PRK06459 58 ILASLYSIEYdHYGKWLSSLYILTILgMAIVLTSDNYLLFLAGWEIMTIPSYVAIALTKK---NKRPAFVFMAFGEL-ST 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 178 FMLICIFKIYELTGTTNYLTLLTLELPSDLQTWLFVgfflslaVKIPMIPFHI--WLPQAHVEAPVAGSVVLAGILLKLG 255
Cdd:PRK06459 134 VLILAGFAWAFIISGTTNFSYLPSPVPLILASFGFI-------IKMGMMPFLVseWLPIAHGNAPSNFSAILSATMTLMG 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 256 GYGFIRFSFPLFPCASEYLSPIVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMG--------LVTLSIFTHSIEG-- 325
Cdd:PRK06459 207 VYGILKMTILTQTIPIGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIENNGailvalglYMVTKQLITSIEHfs 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 326 LVASLFLMMAHGFVSSGLFMGVTVLYDRHHTrsirYYRGVCSSMPLFATLMLCLTLANIsfPSTCNFIGEFLSILSAFQY 405
Cdd:PRK06459 287 LITVILYSFAHSVAKTGLFLSSGLQEKQSIT----YSKKIRNRWIELGLTLLASSLSGL--LPNIGGVASWLLLESLFMF 360
|
..
gi 2086859774 406 AW 407
Cdd:PRK06459 361 AY 362
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
227-439 |
9.59e-08 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 54.53 E-value: 9.59e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 227 PFHIWLPQAhVEAPVAGSVVLAGILLKLGGYGFIRFSfPLFPcaseyLSPIVITLsLIAI-----VYGSFTTCRQNDMKR 301
Cdd:PRK07390 239 PLHLWLDEA-MEGPNPASILRNSVVVATGAWVLIKLQ-PVLA-----LSPVALTV-LIVIgtvtaIGASLVAIAQIDIKR 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 302 LIAYSSVAHMGLVTLSIFTHSIEglvASLFLMMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTL 381
Cdd:PRK07390 311 ALSYSTSAYLGLVFIAVGLQQPD---IALLLLLTHAIAKALLFMSVGSIILTTITQDLTELGGLWSRMPATTLAFLVGSA 387
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2086859774 382 ANISFPStcnfIGEFLSILSAFQ-----YAWWAGVLacsgVILSATYALYM---YNRIFFGSLSPM 439
Cdd:PRK07390 388 GLVALLP----LGGFWALLRLADglwavSPWLVGVL----LLVNALTAFNLtrvFRLVFLGKPQQK 445
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
217-437 |
1.28e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 53.50 E-value: 1.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 217 LSLAVKIPMIPFHIWLPQAHVEAPVAGSVVLAgILLKLGgYGFIRFSFPLfpcaseyLSPIVITLSLIAIVYGSFTTCRQ 296
Cdd:MTH00196 103 VALLFKLSVAPFHMWAPDVYEGAPTKTTALLA-IVPKLG-IFSILVSIGL-------NVNILLIGGLFSLFVGAIGALNQ 173
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 297 NDMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHTrsIRYYRGVCSSMPLFATLM 376
Cdd:MTH00196 174 TKIKRLLAYSGIGHMGFVLWGIEIGSFESIQASLVYLFIYIIMSICVFSIILALNVYKNL--IIEFSGLSRRLPILAITL 251
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2086859774 377 LCLTLANISFPSTCNFIGEFLSILSAFQYAWW-AGVLACSGVILSATYALYMYNRIFFGSLS 437
Cdd:MTH00196 252 ALTFLSIAGIPPLVGFLGKWLILLSGVVYQYYlIFLLAVFCSVIAGVYYVRIVKILFFQANS 313
|
|
| PRK12666 |
PRK12666 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
117-345 |
2.48e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237166 [Multi-domain] Cd Length: 528 Bit Score: 52.93 E-value: 2.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 117 SLFLIELL-LIGVFTTLDILVFYVLFEGILIPMFIIIgVWGSREEKVRAAFYFFFYTLVGSLFMLICIFKIYELT--GTT 193
Cdd:PRK12666 113 ALFQFQLMgLNGAFLTGDLFNLFVFFEVLLAASYGLL-LHGSGRARVRAGLHYVAINLVASSLFLIGVGLIYGVTgtLNM 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 194 NYLTLLTLELPSDLQTWLFVG---FFLSLAVKIPMIPFHIWLPQAHVEA--PVAGsvvLAGILLKLGGYGFIRFSFPLFP 268
Cdd:PRK12666 192 ADLAQRIAQLPAADRALLEAGaalLLVVFLIKAAMWPLNFWLPPAYAAAsaPVAA---LFAIMTKVGIYAILRLSTLLFG 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 269 CASEYLSPI----VITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLF 344
Cdd:PRK12666 269 PEAGASAGFgqdwLLPGGLATLAFGAIGVLAAQRLRRLAAYLVLVSSGTLLAAIGLGNPAATAAALYYLVHSTLAAAALF 348
|
.
gi 2086859774 345 M 345
Cdd:PRK12666 349 L 349
|
|
| ND2 |
MTH00199 |
NADH dehydrogenase subunit 2; Provisional |
217-450 |
3.81e-07 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177245 [Multi-domain] Cd Length: 460 Bit Score: 52.33 E-value: 3.81e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 217 LSLAVKIPMIPFHIWLPQAHVEAPVAGSVVLAgILLKLGGYGFIRFSFPLfpcaseylSPIVITLSLIAIVYGSFTTCRQ 296
Cdd:MTH00199 198 ISLLFKLSAAPFHMWAPDVYEGAPTITTALLA-TVPKIGVFSILVQIGPV--------TNVVLICAVLSIIYGAIGALNQ 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 297 NDMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFmgvTVLYDRHHTRS-IRYYRGVCSSMPLFA-T 374
Cdd:MTH00199 269 TKIKRLLAYSGIGHMGFILFGVAIGSFESIQASLIYMIIYVIMSICSF---SIILSLKLTKGlIVEVSGLSRKNPVIAlT 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 375 LMLC-LTLANIsfPSTCNFIGEFLSILSAFQYAWWagvLACSGVILSATYALYMYNR----IFFGSLSPMILYSREMTRR 449
Cdd:MTH00199 346 LALTfLSIAGI--PPLAGFLSKWLILLSGVSSGYY---LICIIAVLSSVIAGVYYVRvvqiIYFQADYSILIWQKVLKKE 420
|
.
gi 2086859774 450 E 450
Cdd:MTH00199 421 E 421
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
219-410 |
1.77e-06 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 50.39 E-value: 1.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 219 LAVKIPMIPFHIWLPQAHVEAPVAgSVVLAGILLKLGGYG-FIRFSFPLFPCASEYLSPIVITLSLIAIVYGSFTTCRQN 297
Cdd:CHL00049 224 IGFKLSLAPFHQWTPDVYEGSPTP-VVAFLSVTSKVAASAlATRIFDIPFYFSSNEWHLLLEILAILSMILGNLIAITQT 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 298 DMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFL-MMAHGFVSSGLFMGVTVLYDRHHTRSIRYYRGVCSSMPLFAtlm 376
Cdd:CHL00049 303 SMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITyMLFYIFMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLA--- 379
|
170 180 190
....*....|....*....|....*....|....*..
gi 2086859774 377 LCLTLANIS---FPSTCNFIGEflsiLSAFQYAWWAG 410
Cdd:CHL00049 380 LSLALCLLSlggIPPLAGFFGK----LYLFWCGWQAG 412
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
57-318 |
6.51e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 48.75 E-value: 6.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 57 SFHTSIEWLTLHQVKLNwgpLAFAIDGVSIFFIgltilliPICILVSWT----SIRYLIKEFVISLFLIELLLIgvFTTL 132
Cdd:MTH00066 59 SITTSFHWMNIFNFNIN---SSFKFDQYSIIFL-------PIALFVTWSilefAIWYMHSDPKINRFFKYLLIF--LIAM 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 133 DILV----FYVLF---EGILIPMFIIIGVWGSREEKVRAAFYFFFYTLVGSLFMLICIFKIYELTGTTNYLTLLTLELPS 205
Cdd:MTH00066 127 MILVtannLFQLFigwEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAWLAMNTNSWELQQIFLLNDNS 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 206 dlqTWLFVGFFLSLAVKIPMIPFHIWLPQAhVEAPVAGS-------VVLAGILLklggygFIRFSfPLFPCASEYLSpiv 278
Cdd:MTH00066 207 ---TLPLLGLILAAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGIFL------LIRFH-PLLENNQTALT--- 272
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2086859774 279 ITLSLIAIVYGSFTTC--RQNDMKRLIAYSSVAHMGLVTLSI 318
Cdd:MTH00066 273 ICLCLGALTTLFTAACalTQNDIKKIVAFSTSSQLGLMMVTI 314
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
93-387 |
8.63e-06 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 48.47 E-value: 8.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 93 ILLIPICILVSWTSIRYL-----IKEFVISLFLIELLLIGVFTTLDILVFYVLFEGILIPMFIIIGVWGSREEKVRAAFY 167
Cdd:MTH00210 87 IVITSVSALVHIYSTGYMsgdphIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWEGVGLCSYLLINFWLTRIKANKAAIK 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 168 FFFYTLVGSLFMLICIFKIY-ELTGTTNYLTLLTLELPSDLQTWLFVGFFLSLAV--KIPMIPFHIWLPQAhVEAPV--- 241
Cdd:MTH00210 167 AMLINRVGDIGLVLAMIMILkEFGTLEFSTISSLLVTNINKESLTIICLLLFIGAvgKSAQLGLHTWLPDA-MEGPTpvs 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 242 ----AGSVVLAGILLklggygFIRfSFPLFPCASEYLSPIVITLSLIAIVYGSfTTCRQNDMKRLIAYSSVAHMGLVTLS 317
Cdd:MTH00210 246 alihAATMVTAGVFL------IIR-SGPLFEGSPLALTIVTILGALTAFFAAT-VGVVQNDLKKVIAYSTCSQLGYMVMV 317
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2086859774 318 IfthSIEGLVASLFLMMAHGFVSSGLFMGV-TVLYDRHHTRSIRYYRGVCSSMPLFATLMLCLTLANISFP 387
Cdd:MTH00210 318 C---GISNYSTSLFHLMNHAFFKALLFLSAgSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFP 385
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
216-346 |
1.36e-05 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 47.71 E-value: 1.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 216 FLSLAVKIPMIPFHIWLPQAhVEAPV-------AGSVVLAGILLklggygfIRFSFPLFpcaseylSPIVITLSLIAIVy 288
Cdd:PRK07376 234 FLGPMAKSAQFPLHVWLPDA-MEGPTpisalihAATMVAAGVFL-------VARMYPVF-------EQFPAVMTVIAWT- 297
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2086859774 289 GSFT-------TCRQNDMKRLIAYSSVAHMGLVTLSIfthSIEGLVASLFLMMAHGFVSSGLFMG 346
Cdd:PRK07376 298 GAITaflgasiALTQNDIKKGLAYSTISQLGYMVMAM---GCGAYSAGLFHLMTHAYFKAMLFLG 359
|
|
| ND2 |
MTH00198 |
NADH dehydrogenase subunit 2; Provisional |
215-329 |
1.72e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214454 [Multi-domain] Cd Length: 607 Bit Score: 47.16 E-value: 1.72e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 215 FFLSLAV--KIPMIPFHIWLPQAHVEAPVAGSVVLAGIllklggygfIRFSFPLFPCASEYLSPIVITLSLIAIVYGSFT 292
Cdd:MTH00198 303 LFITVAIlfKLAAAPFHMWTPDVYEGAPTPTTALIAII---------PKFTVYILLTSLVITSKLLLSVAIISLVVGAFG 373
|
90 100 110
....*....|....*....|....*....|....*..
gi 2086859774 293 TCRQNDMKRLIAYSSVAHMGLVTLSIFTHSIEGLVAS 329
Cdd:MTH00198 374 ALNQTRIKRLLAYSGIGHIGFILIGVSAGTYESLQAS 410
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
210-437 |
3.95e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 45.65 E-value: 3.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 210 WLFVGFFLSLAVKIPMIPFHIWLPQAHVEAPVAGSVVLAGILlKLGGYGFIRFSFPLFPCASeylspIVITLSLIAIVYG 289
Cdd:MTH00144 85 FSMSLLLLGLCLKLGLFPFHFWVPSVMAGLSWLSCFLLLTWQ-KVAPLFLLSNFLDLYWLAY-----LLCVISVLSALVG 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 290 SFTTCRQNDMKRLIAYSSVAHMGLVTLSIFThsieGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHtrsirYYRGVCSSM 369
Cdd:MTH00144 159 SIGGLNQTQVRALLAYSSISHTGWMLVAILH----GSWLMWMYFLIYIVSSGFLFFSLWSGDSGSM-----KDLGSLKPS 229
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2086859774 370 PLFATLMLCLTLANISFPSTCNFIGEFLSILSAFQYAWWAGVLAcsgVILSATYALYMYNRIFFGSLS 437
Cdd:MTH00144 230 YKTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMESSPLLLILL---LLLGSLISLFFYLSVFFSSFL 294
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
277-382 |
8.65e-05 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 45.02 E-value: 8.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 277 IVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIFTHSIEGLVASLFLMMAHGFVSSGLFMGVTVLYDRHHT 356
Cdd:PRK06277 268 VLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALGTPLGIVAGIFHAINHVIYKSALFLGAGIVSYRTKT 347
|
90 100
....*....|....*....|....*.
gi 2086859774 357 RSIRYYRGVCSSMPLFATLMLCLTLA 382
Cdd:PRK06277 348 SNLRKLGGLLPVMPVVAFMVLCAKLA 373
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
205-437 |
2.72e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 43.29 E-value: 2.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 205 SDLQTWLFVGFFLSLA--VKIPMIPFHIWLPQAH-----VEAPVAGS-VVLAGILLklggygFIRFsFPLFPCaSEYLSP 276
Cdd:MTH00151 170 WDFKLSGWLGLLLVLAamTKSAQIPFSSWLPAAMaaptpVSALVHSStLVTAGVFL------LIRF-FPFLSS-SSGFSS 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 277 IVITLSLIAIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIfthSIEGLVASLFLMMAHGFVSSGLFMGV-TVLYDRHH 355
Cdd:MTH00151 242 FLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSL---GLGMPSLALFHLYTHALFKALLFLCAgSIIHSSSG 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 356 TRSIRYYRGVCSSMPLfatLMLCLTLANIS---FPSTCNFIGEFLSILSAFQYA--WWAGVLACSGVILSATYALymynR 430
Cdd:MTH00151 319 TQDIRLLGSLFLSLPL---TSGCLNISSLSlcgAPFLSGFYSKDLILESSLMSPtsLLMVLLMFVGVGLTALYSA----R 391
|
....*..
gi 2086859774 431 IFFGSLS 437
Cdd:MTH00151 392 LSFCLVW 398
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
205-392 |
3.58e-04 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 43.10 E-value: 3.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 205 SDLQTWLFVGFFLSLAVKIPMIPFHIWLPQAHVEAPVAGSVVLAGILLKLGGYGFIRFSFPLFpcASEYLSPIVITLSLI 284
Cdd:MTH00209 171 SNLGSVISVLIVLAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLF--SSPFFSMSLLLLGSL 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 285 AIVYGSFTTCRQNDMKRLIAYSSVAHMGLVTLSIfthSIEGLVASLFLMMAHGFVSSGLFMGV-TVLYDRHHTRSIRYYR 363
Cdd:MTH00209 249 TTLMASMSANVESDLKKIIALSTLSQLGLMMCSL---GLNQPELAFFHLITHALFKALLFICAgNIIHSHGHSQDIRMVG 325
|
170 180
....*....|....*....|....*....
gi 2086859774 364 GVCSSMPLFATLMlcltlaNISFPSTCNF 392
Cdd:MTH00209 326 NLWYQMPITSICL------NIANLSLCGI 348
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
72-318 |
2.88e-03 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 40.34 E-value: 2.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 72 LNWGPLAFAIdgvSIFFIGLTILLIPICILVSWTSIRYLI--------KEFVISLFLIELL--LIGVFTTlDILVFYVLF 141
Cdd:MTH00208 92 LSNTLFNFSL---SFIFDFYFILFFSVALFVTWSIIEFSHyymsndpnKNAFFRLLIIFLLnmLILTSSN-NLFLLFIGW 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 142 EGILIPMFIIIGVWGSREEKVRAAFYFFFYTLVGS----LFMLICIfkiYELTGTTNYLTLLTLELPSDLQTWLFVGFFL 217
Cdd:MTH00208 168 EGVGFLSFLLISWWTTRNDANSSALQAVIYNRIGDigiiLFLSLSL---INFNSWNLNEILSLNNSNSFLINILLFGILL 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 218 SLAVKIPMIPFHIWLPQAhVEAPVAGS-------VVLAGILLklggygFIRFSfPLFPCASEYLSPIVITLSLIAIVYGS 290
Cdd:MTH00208 245 AAAGKSAQFGLHPWLPAA-MEGPTPVSallhsstMVVAGVFL------LIRTS-PLISNSPWFLSLCLILGSLTALFAAS 316
|
250 260
....*....|....*....|....*...
gi 2086859774 291 fTTCRQNDMKRLIAYSSVAHMGLVTLSI 318
Cdd:MTH00208 317 -TAISQHDIKKIIAYSTTSQLGLMVVAI 343
|
|
| ND2 |
MTH00041 |
NADH dehydrogenase subunit 2; Validated |
217-435 |
4.93e-03 |
|
NADH dehydrogenase subunit 2; Validated
Pssm-ID: 177116 [Multi-domain] Cd Length: 349 Bit Score: 39.14 E-value: 4.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 217 LSLAVKIPMIPFHIWLPQAhveapVAGSVVLAGILLKLggYGFIRFSFPLFPCASEYLSPIVITLSLIAIVYGSFTTCRQ 296
Cdd:MTH00041 100 LALALKLGLAPCHFWFPDV-----LQGLPFLQGLIIAT--WQKIAPLILLISISNLLNSNILILCGILSVLVGGWGGLNQ 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2086859774 297 NDMKRLIAYSSVAHMGLVTlSIFTHSIEglvASLFLMMAHGFVSSGLFMgvtvLYDRHHTRSIRYYRGVCSSMPLFATLM 376
Cdd:MTH00041 173 TQTRKILAFSSIAHLGWII-ITSAYSPN---ASIIMFLIYIIINTSIFL----IGNNFSLSTLSHLNKLSQLNPISAFLF 244
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2086859774 377 LCLTLANISFPSTCNFIGEFLSILSAFQYawwAGVLACSGVILSATYALYMYNRIFFGS 435
Cdd:MTH00041 245 ILSILSLGGLPPLTGFLNKFISLYCLIQN---NSILISIILIIGSLLSLFFYLRISFNT 300
|
|
| |
