|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
2-129 |
1.41e-73 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 222.74 E-value: 1.41e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2095865188 2 LSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLHYLLPFILAALALIHIFLLHEEGSNNPIGVRGDIDVIPFHPYYTFKDL 81
Cdd:MTH00156 140 LSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDL 219
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 2095865188 82 YGWILMIILLTVLVFFAPNLLGDAENFKQANPLVTPVHIRPEWYFLFA 129
Cdd:MTH00156 220 VGFIIMLMLLILLTLINPYLLGDPENFIPANPLVTPVHIQPEWYFLFA 267
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-128 |
8.11e-45 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 149.94 E-value: 8.11e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2095865188 1 FLSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLHYL-LPFILAALALIHIFLLHEEGSNNPIGVRG----DIDVIPFHPY 75
Cdd:COG1290 160 LFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHVLlLPALLLALVVLHLWLLHRHGHNNPPGPERkkteKVDGVPFHPY 239
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2095865188 76 YTFKDLYGWILMIILLTVLVFFAPNllGDAENFKQANPLVTPVHIRPEWYFLF 128
Cdd:COG1290 240 YTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLP 290
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
1-105 |
1.99e-22 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 86.53 E-value: 1.99e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2095865188 1 FLSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLH-YLLPFILAALALIHIFLLHEEGSNNPIGVRGDIDVIPFHPYYTFK 79
Cdd:pfam13631 64 ILSSIPVVGTWLVWLLFGGPFPGTATIPRFYALHiLLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVK 143
|
90 100
....*....|....*....|....*.
gi 2095865188 80 DLYGWILMIILLTVLVFFAPNLLGDA 105
Cdd:pfam13631 144 MLLFFLITVALLIGLAQINPIWLGGP 169
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
59-129 |
5.09e-22 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 84.62 E-value: 5.09e-22
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2095865188 59 NPIGVRGDIDVIPFHPYYTFKDLYGWILMIILLTVLVFFAPNLLGDAENFKQANPLVTPVHIRPEWYFLFA 129
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPV 71
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| CYTB |
MTH00156 |
cytochrome b; Provisional |
2-129 |
1.41e-73 |
|
cytochrome b; Provisional
Pssm-ID: 214440 [Multi-domain] Cd Length: 356 Bit Score: 222.74 E-value: 1.41e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2095865188 2 LSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLHYLLPFILAALALIHIFLLHEEGSNNPIGVRGDIDVIPFHPYYTFKDL 81
Cdd:MTH00156 140 LSAIPYLGTDLVQWIWGGFSVDNATLTRFFTFHFLLPFIILAMVMIHLLFLHQTGSNNPLGLNSNIDKIPFHPYFTFKDL 219
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 2095865188 82 YGWILMIILLTVLVFFAPNLLGDAENFKQANPLVTPVHIRPEWYFLFA 129
Cdd:MTH00156 220 VGFIIMLMLLILLTLINPYLLGDPENFIPANPLVTPVHIQPEWYFLFA 267
|
|
| CYTB |
MTH00119 |
cytochrome b; Provisional |
2-129 |
2.84e-70 |
|
cytochrome b; Provisional
Pssm-ID: 214425 [Multi-domain] Cd Length: 380 Bit Score: 215.15 E-value: 2.84e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2095865188 2 LSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLHYLLPFILAALALIHIFLLHEEGSNNPIGVRGDIDVIPFHPYYTFKDL 81
Cdd:MTH00119 151 LSAIPYIGQTLVEWIWGGFSVDNPTLTRFFALHFLLPFLIAGLTLIHLLFLHETGSNNPLGLNSNTDKIPFHPYFSYKDL 230
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 2095865188 82 YGWILMIILLTVLVFFAPNLLGDAENFKQANPLVTPVHIRPEWYFLFA 129
Cdd:MTH00119 231 LGLTLMLTLLLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFA 278
|
|
| CYTB |
MTH00191 |
cytochrome b; Provisional |
1-129 |
1.76e-69 |
|
cytochrome b; Provisional
Pssm-ID: 177239 [Multi-domain] Cd Length: 365 Bit Score: 212.47 E-value: 1.76e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2095865188 1 FLSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLHYLLPFILAALALIHIFLLHEEGSNNPIGVRGDIDVIPFHPYYTFKD 80
Cdd:MTH00191 146 LLSAIPYIGDDLVQWLWGGFSVDNATLTRFFTFHFLLPFLIAALSLIHLLFLHETGSNNPLGLNSDSDKIPFHPYFSYKD 225
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 2095865188 81 LYGWILMIILLTVLVFFAPNLLGDAENFKQANPLVTPVHIRPEWYFLFA 129
Cdd:MTH00191 226 ILGFFILLFLLLFLVLFSPNLLGDPENFIPANPLVTPVHIKPEWYFLFA 274
|
|
| CYTB |
MTH00145 |
cytochrome b; Provisional |
2-129 |
2.40e-69 |
|
cytochrome b; Provisional
Pssm-ID: 177203 [Multi-domain] Cd Length: 379 Bit Score: 212.84 E-value: 2.40e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2095865188 2 LSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLHYLLPFILAALALIHIFLLHEEGSNNPIGVRGDIDVIPFHPYYTFKDL 81
Cdd:MTH00145 151 LSAIPYVGKMLVEWVWGGFSVGNATLKRFFSLHFLLPFVILGLSVLHLLFLHETGSNNPLGLDSDGDKVPFHPYYTIKDL 230
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 2095865188 82 YGWILMIILLTVLVFFAPNLLGDAENFKQANPLVTPVHIRPEWYFLFA 129
Cdd:MTH00145 231 VGFVVLLFLLVFLVLFFPNLLGDPENFIPANPMVTPVHIQPEWYFLFA 278
|
|
| CYTB |
MTH00053 |
cytochrome b; Provisional |
1-129 |
8.54e-69 |
|
cytochrome b; Provisional
Pssm-ID: 164624 [Multi-domain] Cd Length: 381 Bit Score: 211.49 E-value: 8.54e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2095865188 1 FLSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLHYLLPFILAALALIHIFLLHEEGSNNPIGVRGDIDVIPFHPYYTFKD 80
Cdd:MTH00053 150 LLSAIPYVGDDIVRWVWGGFSVSNATLNRFYSLHYLLPFILAGLALVHLIALHEDGSNNPIGVRSDIDKIPFHYYYVLKD 229
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 2095865188 81 LYGWILMIILLTVLVFFAPNLLGDAENFKQANPLVTPVHIRPEWYFLFA 129
Cdd:MTH00053 230 LYGAVILLIILSIIVFLFPYSLGDAENFKQANPLVTPVHIKPEWYFLFA 278
|
|
| CYTB |
MTH00022 |
cytochrome b; Validated |
1-129 |
2.33e-66 |
|
cytochrome b; Validated
Pssm-ID: 164595 [Multi-domain] Cd Length: 379 Bit Score: 204.93 E-value: 2.33e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2095865188 1 FLSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLHYLLPFILAALALIHIFLLHEEGSNNPIGVRGDIDVIPFHPYYTFKD 80
Cdd:MTH00022 148 LLSAIPYVGTDIVQWVWGGFSVSNATLNRFFSLHFLFPFILAFLVIVHLIYLHVDGSNNPIGLNSSVDKVSFHVYYTSKD 227
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 2095865188 81 LYGWILMIILLTVLVFFAPNLLGDAENFKQANPLVTPVHIRPEWYFLFA 129
Cdd:MTH00022 228 WYGIVVLFFLLSFIVYFAPNLLGDPENFIQANSLVTPVHIQPEWYFLFA 276
|
|
| CYTB |
MTH00016 |
cytochrome b; Validated |
2-129 |
4.93e-66 |
|
cytochrome b; Validated
Pssm-ID: 177102 [Multi-domain] Cd Length: 378 Bit Score: 204.14 E-value: 4.93e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2095865188 2 LSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLHYLLPFILAALALIHIFLLHEEGSNNPIGVRGDIDVIPFHPYYTFKDL 81
Cdd:MTH00016 151 LSAIPYIGKMLVQWLWGGFSVDNATLTRFFALHFLLPFVIAALSMIHLLFLHQTGSNNPLGVNSNSDKVPFHPYYTSKDI 230
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 2095865188 82 YGWILMIILLTVLVFFAPNLLGDAENFKQANPLVTPVHIRPEWYFLFA 129
Cdd:MTH00016 231 VGFIVMLFLLLSVVLLWPNILGDPENFIPANPLVTPTHIKPEWYFLWA 278
|
|
| CYTB |
MTH00131 |
cytochrome b; Provisional |
2-129 |
3.87e-65 |
|
cytochrome b; Provisional
Pssm-ID: 177189 [Multi-domain] Cd Length: 380 Bit Score: 201.80 E-value: 3.87e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2095865188 2 LSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLHYLLPFILAALALIHIFLLHEEGSNNPIGVRGDIDVIPFHPYYTFKDL 81
Cdd:MTH00131 150 LSAVPYVGNTLVQWIWGGFSVDNATLTRFFAFHFLFPFVIAAATILHLLFLHETGSNNPLGLNSDADKISFHPYFSYKDL 229
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 2095865188 82 YGWILMIILLTVLVFFAPNLLGDAENFKQANPLVTPVHIRPEWYFLFA 129
Cdd:MTH00131 230 LGFAILLLALTSLALFSPNLLGDPDNFTPANPLVTPPHIKPEWYFLFA 277
|
|
| CYTB |
MTH00100 |
cytochrome b; Provisional |
2-129 |
1.42e-64 |
|
cytochrome b; Provisional
Pssm-ID: 177162 [Multi-domain] Cd Length: 379 Bit Score: 200.63 E-value: 1.42e-64
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2095865188 2 LSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLHYLLPFILAALALIHIFLLHEEGSNNPIGVRGDIDVIPFHPYYTFKDL 81
Cdd:MTH00100 150 LSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALAMVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDI 229
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 2095865188 82 YGWILMIILLTVLVFFAPNLLGDAENFKQANPLVTPVHIRPEWYFLFA 129
Cdd:MTH00100 230 LGLLLLILTLMLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFA 277
|
|
| CYTB |
MTH00074 |
cytochrome b; Provisional |
2-129 |
1.28e-61 |
|
cytochrome b; Provisional
Pssm-ID: 177145 [Multi-domain] Cd Length: 380 Bit Score: 192.97 E-value: 1.28e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2095865188 2 LSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLHYLLPFILAALALIHIFLLHEEGSNNPIGVRGDIDVIPFHPYYTFKDL 81
Cdd:MTH00074 151 LSAIPYMGDTLVQWIWGGFSVDKATLTRFFAFHFLLPFLIAGASIIHLLFLHETGSNNPTGLNSNPDKVPFHPYFSYKDL 230
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 2095865188 82 YGWILMIILLTVLVFFAPNLLGDAENFKQANPLVTPVHIRPEWYFLFA 129
Cdd:MTH00074 231 LGFLIMLTALALLSLFSPNLLGDPDNFTPANPLVTPPHIQPEWYFLFA 278
|
|
| CYTB |
MTH00034 |
cytochrome b; Validated |
2-129 |
3.48e-58 |
|
cytochrome b; Validated
Pssm-ID: 177109 [Multi-domain] Cd Length: 379 Bit Score: 184.14 E-value: 3.48e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2095865188 2 LSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLHYLLPFILAALALIHIFLLHEEGSNNPIGVRGDIDVIPFHPYYTFKDL 81
Cdd:MTH00034 150 VSAVPYIGTDIVQWIWGGFSVDNATLTRFFAFHFLFPFIIAALSIIHLLFLHQTGSNNPTGLNSNYDKVPFHTYFTTKDL 229
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 2095865188 82 YGWILMIILLTVLVFFAPNLLGDAENFKQANPLVTPVHIRPEWYFLFA 129
Cdd:MTH00034 230 VGFLILFAALSSLALLFPTALNDPENFIPANPLVTPPHIQPEWYFLFA 277
|
|
| CYTB |
MTH00224 |
cytochrome b; Provisional |
1-129 |
8.09e-54 |
|
cytochrome b; Provisional
Pssm-ID: 164767 [Multi-domain] Cd Length: 379 Bit Score: 172.80 E-value: 8.09e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2095865188 1 FLSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLHYLLPFILAALALIHIFLLHEEGSNNPIGVRGDIDVIPFHPYYTFKD 80
Cdd:MTH00224 150 LFSAIPYIGKDLVEWIWGGFAVDNATLNRFFSFHFLLPFAIMGATILHIMFLHQTGSNNPIGINADSARIPFHPYYSIKD 229
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 2095865188 81 LYGWILMIILLTVLVFFAPNLLGDAENFKQANPLVTPVHIRPEWYFLFA 129
Cdd:MTH00224 230 ALGYLIAILLLSLMVLFEPNLFTDPENFLMANPLVTPIHIKPEWYFLWM 278
|
|
| QcrB/PetB |
COG1290 |
Cytochrome b subunit of the bc complex [Energy production and conversion]; |
1-128 |
8.11e-45 |
|
Cytochrome b subunit of the bc complex [Energy production and conversion];
Pssm-ID: 440901 [Multi-domain] Cd Length: 393 Bit Score: 149.94 E-value: 8.11e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2095865188 1 FLSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLHYL-LPFILAALALIHIFLLHEEGSNNPIGVRG----DIDVIPFHPY 75
Cdd:COG1290 160 LFGAIPVIGTWLVTWLFGGEFPGDATLNRFFALHVLlLPALLLALVVLHLWLLHRHGHNNPPGPERkkteKVDGVPFHPY 239
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2095865188 76 YTFKDLYGWILMIILLTVLVFFAPNllGDAENFKQANPLVTPVHIRPEWYFLF 128
Cdd:COG1290 240 YTVKDGFGFFVFLGVFALLAFFFPI--NPPPNYGPANPLATPAHIQPDWYFLP 290
|
|
| CYTB |
MTH00086 |
cytochrome b; Provisional |
2-129 |
2.38e-43 |
|
cytochrome b; Provisional
Pssm-ID: 177151 [Multi-domain] Cd Length: 355 Bit Score: 145.08 E-value: 2.38e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2095865188 2 LSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLHYLLPFILAALALIHIFLLHEEGSNNPIGVRGDIDVIPFHPYYTFKDL 81
Cdd:MTH00086 139 LSVIPIWGPSIVMWIWGGFGVSSATLKFFFVLHFLLPWGLLVLVLFHLIFLHSTGSTSSLYCHGDYDKICFGPEYWNKDA 218
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 2095865188 82 YGwILMIILLTVLVFFAPNLLGDAENFKQANPLVTPVHIRPEWYFLFA 129
Cdd:MTH00086 219 YN-IIFWLVFIIFSLFYPFNLGDPEMFIEADPMMSPVHIVPEWYFLFA 265
|
|
| CYTB |
MTH00033 |
cytochrome b; Provisional |
1-129 |
5.91e-42 |
|
cytochrome b; Provisional
Pssm-ID: 133672 [Multi-domain] Cd Length: 383 Bit Score: 142.38 E-value: 5.91e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2095865188 1 FLSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLHYLLPFILAALALIHIFLLHEEGSNNPIGVRGDIDVIPFHPYYTFKD 80
Cdd:MTH00033 146 LVSAIPSVGGSIVEWIWGGFSVSNCTLNRFFSLHYLLPFVLVGLVLAHLLTLHEKGSNEPLGLVGLSDRTAFHVYFTIKD 225
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 2095865188 81 LYGWILMIILLtVLVFFAP---NLLGDAENFKQANPLVTPVHIRPEWYFLFA 129
Cdd:MTH00033 226 ILGFLILFGVF-VIIGIEPrieTLLQDPENFIQANPLVTPVHIQPEWYFLFA 276
|
|
| CYTB |
MTH00046 |
cytochrome b; Validated |
2-128 |
2.32e-33 |
|
cytochrome b; Validated
Pssm-ID: 177121 [Multi-domain] Cd Length: 355 Bit Score: 118.93 E-value: 2.32e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2095865188 2 LSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLHYLLPFILAALALIHIFLLHEEGSNNPIGVRGDI-DVIPFHPYYTFKD 80
Cdd:MTH00046 141 VDSVPIVGSLVYKYIVGGFSVTGVTLVRVFSVHICLGFVILGLMVVHLFYLHKSGSSNPLFSSNGYsDVVYFHSYFTVKD 220
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 2095865188 81 LYGWILMIILLTVLVFFAPNLLGDAENFKQANPLVTPVHIRPEWYFLF 128
Cdd:MTH00046 221 LFLFMVVCSLLVFWLFVSPDLVLDIEAYLEADPLVTPVSIKPEWYFLA 268
|
|
| Cytochrom_B_N_2 |
pfam13631 |
Cytochrome b(N-terminal)/b6/petB; |
1-105 |
1.99e-22 |
|
Cytochrome b(N-terminal)/b6/petB;
Pssm-ID: 433364 Cd Length: 169 Bit Score: 86.53 E-value: 1.99e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2095865188 1 FLSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLH-YLLPFILAALALIHIFLLHEEGSNNPIGVRGDIDVIPFHPYYTFK 79
Cdd:pfam13631 64 ILSSIPVVGTWLVWLLFGGPFPGTATIPRFYALHiLLLPGLILALIVAHLLLVEKHGQFPPPGTEKNVVGVPFWPVFAVK 143
|
90 100
....*....|....*....|....*.
gi 2095865188 80 DLYGWILMIILLTVLVFFAPNLLGDA 105
Cdd:pfam13631 144 MLLFFLITVALLIGLAQINPIWLGGP 169
|
|
| cytochrome_b_C |
cd00290 |
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
59-129 |
5.09e-22 |
|
Cytochrome b(C-terminus)/b6/petD: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal domain is involved in forming the ubiquinol/ubiquinone binding sites, but not the heme binding sites. The N-terminal portion of cytochrome b, which contains both heme binding sites, is described in a separate CD.
Pssm-ID: 238179 [Multi-domain] Cd Length: 147 Bit Score: 84.62 E-value: 5.09e-22
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2095865188 59 NPIGVRGDIDVIPFHPYYTFKDLYGWILMIILLTVLVFFAPNLLGDAENFKQANPLVTPVHIRPEWYFLFA 129
Cdd:cd00290 1 NPLGLASDMDKISFHPYFWPKDLLGAFPILIIFMILVFYAPNLLGHPDNGIPANPLATPLHILPEWYFLPV 71
|
|
| Cytochrome_b_N |
cd00284 |
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit ... |
2-58 |
4.21e-21 |
|
Cytochrome b (N-terminus)/b6/petB: Cytochrome b is a subunit of cytochrome bc1, an 11-subunit mitochondrial respiratory enzyme. Cytochrome b spans the mitochondrial membrane with 8 transmembrane helices (A-H) in eukaryotes. In plants and cyanobacteria, cytochrome b6 is analogous to eukaryote cytochrome b, containing two chains: helices A-D are encoded by the petB gene and helices E-H are encoded by the petD gene in these organisms. Cytochrome b/b6 contains two bound hemes and two ubiquinol/ubiquinone binding sites. The C-terminal portion of cytochrome b is described in a separate CD.
Pssm-ID: 238176 Cd Length: 200 Bit Score: 83.96 E-value: 4.21e-21
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 2095865188 2 LSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLHYLLPFILAALALIHIFLLHEEGSN 58
Cdd:cd00284 144 FSAIPVIGITLVEWLWGGFSVDNATLTRFFALHFLLPFIIAVIVILHLLFLHEQGSS 200
|
|
| Cytochrome_B |
pfam00033 |
Cytochrome b/b6/petB; |
2-56 |
1.16e-17 |
|
Cytochrome b/b6/petB;
Pssm-ID: 306530 Cd Length: 189 Bit Score: 74.73 E-value: 1.16e-17
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 2095865188 2 LSAIPYVGNDIVEWVWGGYSVSNATLNRFYSLHYLLPFILAALALIHIFLLHEEG 56
Cdd:pfam00033 135 LSAIPVIGDTLVEWIWGSFSVDQATLTRFFSLHFLLPFILAILMLLHLLFLHETG 189
|
|
| petB |
CHL00070 |
cytochrome b6 |
4-61 |
7.82e-10 |
|
cytochrome b6
Pssm-ID: 177009 Cd Length: 215 Bit Score: 54.34 E-value: 7.82e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 2095865188 4 AIPYVGNDIVEWVWGGYSVSNATLNRFYSLH-YLLPFILAALALIHIFLLHEEGSNNPI 61
Cdd:CHL00070 157 AIPVIGSPLVELLRGSVSVGQSTLTRFYSLHtFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
|
| PRK03735 |
PRK03735 |
cytochrome b6; Provisional |
3-61 |
2.64e-08 |
|
cytochrome b6; Provisional
Pssm-ID: 179639 Cd Length: 223 Bit Score: 50.10 E-value: 2.64e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2095865188 3 SAIPYVGNDIVEWVWGGYSVSNATLNRFYSLH-YLLPFILAALALIHIFLLHEEGSNNPI 61
Cdd:PRK03735 164 EAIPVIGDFIKTLLRGGEIVGAQTLTRFFAIHvFFLPWALAVLMLAHFLMIRKQGISGPL 223
|
|
| Cytochrom_B_C |
pfam00032 |
Cytochrome b(C-terminal)/b6/petD; |
110-129 |
4.08e-06 |
|
Cytochrome b(C-terminal)/b6/petD;
Pssm-ID: 459640 [Multi-domain] Cd Length: 101 Bit Score: 42.47 E-value: 4.08e-06
|
|