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Atxn7l2 protein [Mus musculus]
SCA7 domain-containing protein( domain architecture ID 10550843)
SCA7 domain-containing protein similar to protein Sgf73/Sca7 which is a component of the multihistone acetyltransferase complexes SAGA and SILK
List of domain hits
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Name | Accession | Description | Interval | E-value | ||||
SCA7 | pfam08313 | SCA7, zinc-binding domain; This domain is found in the protein Sgf73/Sca7 which is a component ... |
203-264 | 5.53e-23 | ||||
SCA7, zinc-binding domain; This domain is found in the protein Sgf73/Sca7 which is a component of the multihistone acetyltransferase complexes SAGA and SILK. This domain is also found in Ataxin-7, a human protein which in its polyglutamine expanded pathological form, is responsible for the neurodegenerative disease spinocerebellar ataxia 7 (SCA7). Ataxin-7 is an integral component of the mammalian SAGA-like complexes, the TATA-binding protein-free TAF-containing complex (TFTC) and the SPT3/TAF9/GCN5 acetyltransferase complex (STAGA). This domain is a minimal domain in ataxin-7-like proteins that is required for interaction with TFTC/STAGA subunits and is conserved highly through evolution. The domain contains a conserved Cys(3)His motif that binds zinc, thus indicating this to be a new zinc-binding domain. : Pssm-ID: 462422 Cd Length: 61 Bit Score: 92.28 E-value: 5.53e-23
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Sin3 super family | cl35027 | Histone deacetylase complex, regulatory component SIN3 [Chromatin structure and dynamics]; |
125-328 | 5.59e-03 | ||||
Histone deacetylase complex, regulatory component SIN3 [Chromatin structure and dynamics]; The actual alignment was detected with superfamily member COG5602: Pssm-ID: 227889 [Multi-domain] Cd Length: 1163 Bit Score: 40.29 E-value: 5.59e-03
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Name | Accession | Description | Interval | E-value | ||||
SCA7 | pfam08313 | SCA7, zinc-binding domain; This domain is found in the protein Sgf73/Sca7 which is a component ... |
203-264 | 5.53e-23 | ||||
SCA7, zinc-binding domain; This domain is found in the protein Sgf73/Sca7 which is a component of the multihistone acetyltransferase complexes SAGA and SILK. This domain is also found in Ataxin-7, a human protein which in its polyglutamine expanded pathological form, is responsible for the neurodegenerative disease spinocerebellar ataxia 7 (SCA7). Ataxin-7 is an integral component of the mammalian SAGA-like complexes, the TATA-binding protein-free TAF-containing complex (TFTC) and the SPT3/TAF9/GCN5 acetyltransferase complex (STAGA). This domain is a minimal domain in ataxin-7-like proteins that is required for interaction with TFTC/STAGA subunits and is conserved highly through evolution. The domain contains a conserved Cys(3)His motif that binds zinc, thus indicating this to be a new zinc-binding domain. Pssm-ID: 462422 Cd Length: 61 Bit Score: 92.28 E-value: 5.53e-23
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Sin3 | COG5602 | Histone deacetylase complex, regulatory component SIN3 [Chromatin structure and dynamics]; |
125-328 | 5.59e-03 | ||||
Histone deacetylase complex, regulatory component SIN3 [Chromatin structure and dynamics]; Pssm-ID: 227889 [Multi-domain] Cd Length: 1163 Bit Score: 40.29 E-value: 5.59e-03
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Name | Accession | Description | Interval | E-value | ||||
SCA7 | pfam08313 | SCA7, zinc-binding domain; This domain is found in the protein Sgf73/Sca7 which is a component ... |
203-264 | 5.53e-23 | ||||
SCA7, zinc-binding domain; This domain is found in the protein Sgf73/Sca7 which is a component of the multihistone acetyltransferase complexes SAGA and SILK. This domain is also found in Ataxin-7, a human protein which in its polyglutamine expanded pathological form, is responsible for the neurodegenerative disease spinocerebellar ataxia 7 (SCA7). Ataxin-7 is an integral component of the mammalian SAGA-like complexes, the TATA-binding protein-free TAF-containing complex (TFTC) and the SPT3/TAF9/GCN5 acetyltransferase complex (STAGA). This domain is a minimal domain in ataxin-7-like proteins that is required for interaction with TFTC/STAGA subunits and is conserved highly through evolution. The domain contains a conserved Cys(3)His motif that binds zinc, thus indicating this to be a new zinc-binding domain. Pssm-ID: 462422 Cd Length: 61 Bit Score: 92.28 E-value: 5.53e-23
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Sin3 | COG5602 | Histone deacetylase complex, regulatory component SIN3 [Chromatin structure and dynamics]; |
125-328 | 5.59e-03 | ||||
Histone deacetylase complex, regulatory component SIN3 [Chromatin structure and dynamics]; Pssm-ID: 227889 [Multi-domain] Cd Length: 1163 Bit Score: 40.29 E-value: 5.59e-03
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Blast search parameters | ||||
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