|
Name |
Accession |
Description |
Interval |
E-value |
| ND5 |
MTH00108 |
NADH dehydrogenase subunit 5; Provisional |
1-298 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177170 [Multi-domain] Cd Length: 602 Bit Score: 621.87 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:MTH00108 242 PVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQ 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANT 160
Cdd:MTH00108 322 PHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAANT 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 161 SYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQMT 240
Cdd:MTH00108 402 SYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQMT 481
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 23495647 241 MPYYLKTTALIVTILGFILALEISNMTKNLKYHYPSNAFKFSTLLGYFPTIMHRLAPY 298
Cdd:MTH00108 482 MPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPY 539
|
|
| ND5 |
MTH00137 |
NADH dehydrogenase subunit 5; Provisional |
1-297 |
0e+00 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214428 [Multi-domain] Cd Length: 611 Bit Score: 519.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:MTH00137 247 PVSALLHSSTMVVAGIFLLIRLSPLMENNQTALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQ 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANT 160
Cdd:MTH00137 327 PQLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNT 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 161 SYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQMT 240
Cdd:MTH00137 407 SHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFNPLSPINENNPAVINPIKRLAWGSIIAGLLITSNILPLKTPVMT 486
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 23495647 241 MPYYLKTTALIVTILGFILALEISNMT-KNLKYHYPSNAFKFSTLLGYFPTIMHRLAP 297
Cdd:MTH00137 487 MPPLLKLAALIVTILGLLIALELASLTnKQFKPTPTLPPHHFSNMLGFFPAIIHRLTP 544
|
|
| ND5 |
MTH00004 |
NADH dehydrogenase subunit 5; Validated |
1-297 |
1.14e-167 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 214398 [Multi-domain] Cd Length: 602 Bit Score: 478.12 E-value: 1.14e-167
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:MTH00004 241 PVSALLHSSTMVVAGIFLLIRTHPLLQNNQTALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQ 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANT 160
Cdd:MTH00004 321 PQLAFLHISTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNT 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 161 SYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQMT 240
Cdd:MTH00004 401 SYLNAWALLLTLLATSFTAAYSLRMILLVQTGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTKTPPMT 480
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 23495647 241 MPYYLKTTALIVTILGFILALEISNMTKNLKYHYPSNAFKFSTLLGYFPTIMHRLAP 297
Cdd:MTH00004 481 MPTTTKLAALIVTILGILLALELSNMTTTLTPPKQNTLHNFSNQLAFFNPLTHRLLP 537
|
|
| ND5 |
MTH00066 |
NADH dehydrogenase subunit 5; Provisional |
1-297 |
8.13e-165 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214416 [Multi-domain] Cd Length: 598 Bit Score: 470.93 E-value: 8.13e-165
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:MTH00066 239 PVSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQ 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANT 160
Cdd:MTH00066 319 PQLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNT 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 161 SYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQMT 240
Cdd:MTH00066 399 SNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQILT 478
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 23495647 241 MPYYLKTTALIVTILGFILALEISNMTKNLKyhYPSNAFKFSTLLGYFPTIMHRLAP 297
Cdd:MTH00066 479 MPTFMKLAALLVTLLGLLIALDLAKITSKTT--PKTKMHSFSNLLAFFPTIIHRLSP 533
|
|
| ND5 |
MTH00211 |
NADH dehydrogenase subunit 5; Provisional |
1-298 |
5.01e-139 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214459 [Multi-domain] Cd Length: 597 Bit Score: 405.10 E-value: 5.01e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:MTH00211 236 PVSALLHSSTMVVAGVFLLIRLSPLFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQ 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANT 160
Cdd:MTH00211 316 PQLAFLHICTHAFFKAMLFMCSGSIIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNG 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 161 SYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPQMT 240
Cdd:MTH00211 396 SYLNAWALLLTLLATSLTAAYSFRLIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILS 475
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 23495647 241 MPYYLKTTALIVTILGFILALEISNMTknlKYHYPSNAFKFSTLLGYFPTIMHRLAPY 298
Cdd:MTH00211 476 LPFLLKLMPLLVTIVGLLLGLELVNLT---HKQLKTSTLSFSNMLGYYPPIIHRLLPK 530
|
|
| ND5 |
MTH00208 |
NADH dehydrogenase subunit 5; Provisional |
1-293 |
3.28e-109 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177251 [Multi-domain] Cd Length: 628 Bit Score: 329.62 E-value: 3.28e-109
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:MTH00208 268 PVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVVAIGLNQ 347
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANT 160
Cdd:MTH00208 348 PNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLILEAGLA 427
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 161 SYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPTtiPQMT 240
Cdd:MTH00208 428 SISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFNL--PPLT 505
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 23495647 241 MPYYLKTTALIVTILGFILALEISNMTKNLkyHYPSNAFKFSTLLGYFPTIMH 293
Cdd:MTH00208 506 LPLILKSLPLIVTIIGAAFSFSFLLSLSSN--PINSNFFSFLSNQWFFVNISH 556
|
|
| NuoL |
COG1009 |
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ... |
1-261 |
8.83e-81 |
|
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440633 [Multi-domain] Cd Length: 608 Bit Score: 255.46 E-value: 8.83e-81
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:COG1009 243 PVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALFAALIALAQTDIKRVLAYSTVSQLGYMFLALGVGA 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PYLAFLHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANT 160
Cdd:COG1009 323 YVAALFHLLTHAFFKALLFLGAGSVIHATG-TRDIRKMGGLRKKMPITAITFLIGALSLAGIPPFAGFFSKEAILEAALE 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 161 SYTNAWALLMTLIATSF-TAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNN----IPPTT 235
Cdd:COG1009 402 AGGLGPLLLAVALLGAFlTAFYSFRLFFLVFFGKPRPKTPKHPHESPWLMTLPLVVLAVLSLVLGLLLPGLleglLAPAA 481
|
250 260 270
....*....|....*....|....*....|
gi 23495647 236 IPQMTM----PYYLKTTALIVTILGFILAL 261
Cdd:COG1009 482 VLGGELhlahGLLLNALPLLLSLLGIALGY 511
|
|
| ND5 |
MTH00151 |
NADH dehydrogenase subunit 5; Provisional |
1-284 |
2.96e-80 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214436 [Multi-domain] Cd Length: 565 Bit Score: 253.23 E-value: 2.96e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:MTH00151 208 PVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFLLFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGM 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANT 160
Cdd:MTH00151 288 PSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIRLLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLM 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 161 SYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISnNIPPTTIPQMT 240
Cdd:MTH00151 368 SPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKSSSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQ-SLFEGFSEEFF 446
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 23495647 241 MPYYLKTTALIVTILGFILALeISNMTKNLKYHYPSNAFKFSTL 284
Cdd:MTH00151 447 LPSYLKLLIGFVILLGLFLSF-GFWDSGFSSSKMVKLSFFFSSM 489
|
|
| ND5 |
MTH00165 |
NADH dehydrogenase subunit 5; Provisional |
1-291 |
4.06e-78 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214444 [Multi-domain] Cd Length: 573 Bit Score: 247.75 E-value: 4.06e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLtENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:MTH00165 212 PVSALVHSSTLVTAGVYLLIRFNNL-LFSSFFSKFLLLISLLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGF 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANT 160
Cdd:MTH00165 291 PKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNLSLCGFPFLSGFYSKDLILEMVSM 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 161 SYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIpQMT 240
Cdd:MTH00165 371 SNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLLFMSIFGGSMLSWLIFPEPY-MIC 449
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 23495647 241 MPYYLKTTALIVTILGFILALEISNMTK--NLKYHYPSNAFKFSTLLGYFPTI 291
Cdd:MTH00165 450 LPFYLKLLTLFVILLGGWLGYELSLMSLsyNLKSLKNYKLSSFLGSMWFMPFL 502
|
|
| PRK06590 |
PRK06590 |
NADH:ubiquinone oxidoreductase subunit L; Reviewed |
1-260 |
6.08e-76 |
|
NADH:ubiquinone oxidoreductase subunit L; Reviewed
Pssm-ID: 235836 [Multi-domain] Cd Length: 624 Bit Score: 243.53 E-value: 6.08e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:PRK06590 249 PVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAAFIGLVQTDIKRVLAYSTMSQLGYMFLALGVGA 328
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANT 160
Cdd:PRK06590 329 YAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYATFLIGTLALIGIPPFAGFFSKDEILEAAFA 408
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 161 SYtNAWALLMTLIATSFTAIYSTRIIFFALLGQPR--------FPTLVNInennPLLInsikrLLIGSLFAGYIISNNI- 231
Cdd:PRK06590 409 NG-HINLFVAGLVGAFLTAFYSFRLIFLVFHGKEKekihhpheSPAVMTL----PLIV-----LAVLSVFAGALIVPPFl 478
|
250 260 270
....*....|....*....|....*....|....*..
gi 23495647 232 --------PPTTIPQMTMPYYLKTTALIVTILGFILA 260
Cdd:PRK06590 479 gvlpltteLAHGEAEHHLPVWVALLPLVVALAGIALA 515
|
|
| NDH_I_L |
TIGR01974 |
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ... |
1-260 |
2.13e-72 |
|
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]
Pssm-ID: 273905 [Multi-domain] Cd Length: 609 Bit Score: 233.71 E-value: 2.13e-72
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:TIGR01974 245 PVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRILAYSTMSQLGYMFLALGVGA 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANT 160
Cdd:TIGR01974 325 YAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALIGFPGFAGFFSKDLILEAAFA 404
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 161 SYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPP--TTIPQ 238
Cdd:TIGR01974 405 SGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGSVFAGFFIVPLFEFlkGVLPT 484
|
250 260 270
....*....|....*....|....*....|
gi 23495647 239 MT--------MPYYLKTTALIVTILGFILA 260
Cdd:TIGR01974 485 SAepalehhhVPALEIWSPTAVAILGILLA 514
|
|
| ND5 |
MTH00207 |
NADH dehydrogenase subunit 5; Provisional |
1-272 |
1.32e-67 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 164753 [Multi-domain] Cd Length: 572 Bit Score: 220.41 E-value: 1.32e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:MTH00207 211 PVSALVHSSTLVTAGVFLLIRFYPFLSSTYWFNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGM 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANT 160
Cdd:MTH00207 291 PKLALFHLITHALFKALLFVCAGSLIHSHHHSQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLF 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 161 SYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIIsNNIPPTTIPQMT 240
Cdd:MTH00207 371 YPHNSLMILMIFLATALTAAYSTRFTLAVLWSPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSAL-NWWLPTPQEEPI 449
|
250 260 270
....*....|....*....|....*....|....
gi 23495647 241 MPYYLKTTALIVTILGFILALEI--SNMTKNLKY 272
Cdd:MTH00207 450 LPLQYKLLPLLVVTLGALLAWLFttPNITKTPLL 483
|
|
| ND5 |
MTH00210 |
NADH dehydrogenase subunit 5; Provisional |
1-265 |
6.51e-67 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177253 [Multi-domain] Cd Length: 616 Bit Score: 219.49 E-value: 6.51e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:MTH00210 243 PVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKKVIAYSTCSQLGYMVMVCGISN 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANT 160
Cdd:MTH00210 323 YSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSLMGFPYLTGFYSKDLILELTYD 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 161 SYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFP--TLVNINENN-----PLLInsikrLLIGSLFAGYI-----IS 228
Cdd:MTH00210 403 KYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKkeVFIGVHESSwnitfPLLL-----LAFGSIFVGYLgkevvLS 477
|
250 260 270
....*....|....*....|....*....|....*..
gi 23495647 229 NNIPPttipqmTMPYYLKTTALIVTILGFILALEISN 265
Cdd:MTH00210 478 NVIPP------IVPNSIKMIPLLFSLLGALLAFVIYN 508
|
|
| ND5 |
MTH00020 |
NADH dehydrogenase subunit 5; Reviewed |
1-283 |
9.88e-67 |
|
NADH dehydrogenase subunit 5; Reviewed
Pssm-ID: 214400 [Multi-domain] Cd Length: 610 Bit Score: 218.79 E-value: 9.88e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:MTH00020 242 PVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKVIAYSTCSQLGYMVVACGLSH 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANT 160
Cdd:MTH00020 322 YSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLMGFPYLTGFYSKDLILELAFG 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 161 SYTNAWALLMTLIATSFTAIYSTRIIFFALLGQP--RFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNI--PPTTI 236
Cdd:MTH00020 402 QYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTnlKKAVFFHLHEGDWNLLLPLGILALGSIFVGYLAKEMIwsFQITL 481
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 23495647 237 PQMtMPYYLKTTALIVTILGFILALEIsnmtknlkYHYPSNAFKFST 283
Cdd:MTH00020 482 PPI-VPLSIKLLPVFLSLGGIGLVIIL--------YFYSSKTFRVPF 519
|
|
| ND5 |
MTH00209 |
NADH dehydrogenase subunit 5; Provisional |
1-279 |
2.58e-66 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177252 [Multi-domain] Cd Length: 564 Bit Score: 216.82 E-value: 2.58e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:MTH00209 207 PVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASMSANVESDLKKIIALSTLSQLGLMMCSLGLNQ 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANT 160
Cdd:MTH00209 287 PELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITSICLNIANLSLCGIPFLAGFYSKDLILESMLE 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 161 SYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTIPqMT 240
Cdd:MTH00209 367 SNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLNLKPMLVLTLGSITGGSVMSWVMVPSVNS-VV 445
|
250 260 270
....*....|....*....|....*....|....*....
gi 23495647 241 MPYYLKTTALIVTILGFILALEISNMTKNLKYHYPSNAF 279
Cdd:MTH00209 446 LPWFLKLLPIMLILFGVLLMYMVLKKNFFLIKGYKVNYF 484
|
|
| PRK07376 |
PRK07376 |
NADH-quinone oxidoreductase subunit L; |
1-195 |
5.42e-53 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236005 [Multi-domain] Cd Length: 673 Bit Score: 183.30 E-value: 5.42e-53
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:PRK07376 259 PISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITAFLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGA 338
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PYLAFLHICTHAFFKAMLFMCSGSIIHSLND--------EQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKD 152
Cdd:PRK07376 339 YSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMRLMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKD 418
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 23495647 153 LIIEAANTSYTNAWalLMTLIATSFTAIYSTRIIFFALLGQPR 195
Cdd:PRK07376 419 EILGAAFEANPALW--FVGFLTAGMTAFYMFRMYFLTFEGEFR 459
|
|
| ND5 |
MTH00032 |
NADH dehydrogenase subunit 5; Provisional |
1-285 |
3.41e-50 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214407 [Multi-domain] Cd Length: 669 Bit Score: 175.92 E-value: 3.41e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:MTH00032 257 PVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGALTAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEG 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PY-LAFLHICTHAFFKAMLFMCSGSIIHSLN-DEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIE-- 156
Cdd:MTH00032 337 SHnVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGGLIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILElt 416
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 157 ----------------------------------AANTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFP----- 197
Cdd:MTH00032 417 ysgrnmgipfgssllkiqgdigikkddrgsiggpEGYPSRGSAFAFWLGTVAALLTAFYSIRLVYITFIISPNSPkesli 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 198 -TLVNINENNPLLINSIkrLLIGSLFAGYIIsNNIPPTTIPQMTMPYYLKTTALIVTILGFILALEISNMTKNLKYHYPS 276
Cdd:MTH00032 497 sSHINIVDKRVLTVLSL--LCFGAIFVGYLI-QDILIGDIEHPIVPPLIKVMPTLMGLFGMGLCLWAQKGTREGELYWGF 573
|
....*....
gi 23495647 277 NAFKFSTLL 285
Cdd:MTH00032 574 DPIGPSFLL 582
|
|
| PRK12648 |
PRK12648 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-195 |
9.40e-41 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237157 [Multi-domain] Cd Length: 948 Bit Score: 150.73 E-value: 9.40e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPL---TENNKYIQSITlclGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIG 77
Cdd:PRK12648 239 PVSAYLHSATMVKAGVFLLARLWPVlagTEEWFWIVGGA---GLITLLLGAYFALFQHDLKGLLAYSTISHLGLITLLLG 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 78 INQPY---LAFLHICTHAFFKAMLFMCSGSIIHslndE---QDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSK 151
Cdd:PRK12648 316 LGSPLaavAAIFHIINHATFKASLFMAAGIIDH----EtgtRDMRRLSGLRRLMPITATLAMVAAAAMAGVPLLNGFLSK 391
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 23495647 152 DLII-EAANTSYTNAWALLMTLIAT---SFTAIYSTRIIFFALLGQPR 195
Cdd:PRK12648 392 EMFFaETLDTHLLGSLDWLLPVAATlagAFSVAYSLRFIHDVFFGPPP 439
|
|
| PRK12650 |
PRK12650 |
DUF4040 family protein; |
1-195 |
1.21e-39 |
|
DUF4040 family protein;
Pssm-ID: 237158 [Multi-domain] Cd Length: 962 Bit Score: 147.50 E-value: 1.21e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:PRK12650 240 PVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMGAVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGT 319
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PY---LAFLHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEA 157
Cdd:PRK12650 320 PFaltAAVVHTLAHALFKSSLFMLIGVVDHQAG-TRDIRRLGSLWRRMPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTA 398
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 23495647 158 ANTSYTNAWALLMTLIATSFTAI----YSTRIIFFALLGQPR 195
Cdd:PRK12650 399 FLEAPGGNAGVVLLLVGAALGAVftfaYSARLVLGAFVDGPR 440
|
|
| ndhF |
CHL00025 |
NADH dehydrogenase subunit 5 |
1-187 |
2.71e-39 |
|
NADH dehydrogenase subunit 5
Pssm-ID: 214338 [Multi-domain] Cd Length: 741 Bit Score: 146.19 E-value: 2.71e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:CHL00025 259 PISALIHAATMVAAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGS 338
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PYLAFLHICTHAFFKAMLFMCSGSIIHSL--------NDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKD 152
Cdd:CHL00025 339 YRAALFHLITHAYSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKD 418
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 23495647 153 LIIeaantsyTNAW--ALLMTLIATS---FTAIYSTRIIF 187
Cdd:CHL00025 419 EIL-------NDSWlySPIFAIIAWStagLTAFYMFRIYL 451
|
|
| HyfB |
COG0651 |
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ... |
1-189 |
7.56e-36 |
|
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];
Pssm-ID: 440416 [Multi-domain] Cd Length: 430 Bit Score: 133.35 E-value: 7.56e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLhSSTMVVAGIFLLIRFYPL---TENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIG 77
Cdd:COG0651 238 PVSALL-SGLLTKVGVYAILRVLTLlfgADPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSVSQIGYILLGLG 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 78 INQPYL---AFLHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLI 154
Cdd:COG0651 317 LGTPLGlagALFHLLNHALAKALLFLAAGAIERATG-TRDLDKLGGLGKRMPLTAAAFLIGALALAGLPPLSGFVSKWLL 395
|
170 180 190
....*....|....*....|....*....|....*.
gi 23495647 155 IEAANTSytNAWALLMTLIATSF-TAIYSTRIIFFA 189
Cdd:COG0651 396 LQAALEA--GAWLLAAVLLLSSLlTLAYFVRIFGRA 429
|
|
| PRK12647 |
PRK12647 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-174 |
2.95e-34 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237156 [Multi-domain] Cd Length: 761 Bit Score: 131.58 E-value: 2.95e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:PRK12647 227 PVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYSTVSALGTLVMLLGLGS 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PYL---AFLHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEA 157
Cdd:PRK12647 307 ELAikaAVLFLVAHSLYKGALFMVAGIIDHETG-TRDITKLGGLRRAMPITAAAALLAALSMAGLPPLFGFLAKELIYEA 385
|
170
....*....|....*..
gi 23495647 158 anTSYTNAWALLMTLIA 174
Cdd:PRK12647 386 --LLEAPLWSLILTVAA 400
|
|
| NADH5_C |
pfam06455 |
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ... |
181-298 |
3.49e-34 |
|
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.
Pssm-ID: 368917 [Multi-domain] Cd Length: 181 Bit Score: 122.66 E-value: 3.49e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 181 YSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPTTiPQMTMPYYLKTTALIVTILGFILA 260
Cdd:pfam06455 1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLIFPKP-PMMTMPLYLKLLALLVTILGLLLG 79
|
90 100 110
....*....|....*....|....*....|....*....
gi 23495647 261 LEISNMT-KNLKYHYPSNAFKFSTLLGYFPTIMHRLAPY 298
Cdd:pfam06455 80 LELSNLSnKQLKKSLNFNLHSFSGSMWFFPNLSHRLIPK 118
|
|
| Proton_antipo_M |
pfam00361 |
Proton-conducting membrane transporter; This is a family of membrane transporters that ... |
1-158 |
9.46e-34 |
|
Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.
Pssm-ID: 425636 [Multi-domain] Cd Length: 291 Bit Score: 124.73 E-value: 9.46e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLhSSTMVVAGIFLLIRFYPLTEN-NKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGIN 79
Cdd:pfam00361 115 PVSALL-AATLVKAGGYGLIRRSLLYLPsSPFIQQILLILAIISMLLGSLAALVQTDIKRLLAYSSISHMGYMLIALGAG 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 80 QPY---LAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIE 156
Cdd:pfam00361 194 TIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLAKTMPILALVFLVAMLSLAGLPPTAGFLGKFLILA 273
|
..
gi 23495647 157 AA 158
Cdd:pfam00361 274 AA 275
|
|
| ND5 |
MTH00095 |
NADH dehydrogenase subunit 5; Provisional |
1-192 |
5.74e-32 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 177158 [Multi-domain] Cd Length: 527 Bit Score: 123.87 E-value: 5.74e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIqSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:MTH00095 196 PVSSLVHSSTLVTAGLILLMNFSYLILNMNVM-KIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSMLTFGSGL 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANT 160
Cdd:MTH00095 275 SFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKELILELFFF 354
|
170 180 190
....*....|....*....|....*....|..
gi 23495647 161 SYTNAWALLMTLIATSFTAIYSTRIIFFALLG 192
Cdd:MTH00095 355 NNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLS 386
|
|
| PRK12644 |
PRK12644 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-189 |
1.23e-31 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237154 [Multi-domain] Cd Length: 965 Bit Score: 124.27 E-value: 1.23e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:PRK12644 235 PVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRALRQHDLKLILAYGTVSQLGFLTVLVGIGT 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 P--YLAFLH-ICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEA 157
Cdd:PRK12644 315 RdaALAGLAmLLAHALFKAALFLVVGIIDHSTG-TRDIRKLSGLGRRQPVLAVVAALAAASMAGLPPLLGFVAKEAALEA 393
|
170 180 190
....*....|....*....|....*....|....*.
gi 23495647 158 ---ANTSYTNAWALLMTLIATS-FTAIYSTRIIFFA 189
Cdd:PRK12644 394 vlhDGALGPAGPVVLAGIVLGSiLTVAYSLRFLWGA 429
|
|
| PRK07390 |
PRK07390 |
NAD(P)H-quinone oxidoreductase subunit F; Validated |
3-194 |
2.13e-31 |
|
NAD(P)H-quinone oxidoreductase subunit F; Validated
Pssm-ID: 236008 [Multi-domain] Cd Length: 613 Bit Score: 123.10 E-value: 2.13e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 3 SALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY 82
Cdd:PRK07390 254 ASILRNSVVVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGASLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPD 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 83 LAFLHICTHAFFKAMLFMCSGSIIHSLNDeQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSkdlIIEAANTSY 162
Cdd:PRK07390 334 IALLLLLTHAIAKALLFMSVGSIILTTIT-QDLTELGGLWSRMPATTLAFLVGSAGLVALLPLGGFWA---LLRLADGLW 409
|
170 180 190
....*....|....*....|....*....|...
gi 23495647 163 TNAWALLMTLIATS-FTAIYSTRIIFFALLGQP 194
Cdd:PRK07390 410 AVSPWLVGVLLLVNaLTAFNLTRVFRLVFLGKP 442
|
|
| PRK12645 |
PRK12645 |
monovalent cation/H+ antiporter subunit A; Reviewed |
1-195 |
3.71e-30 |
|
monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 237155 [Multi-domain] Cd Length: 800 Bit Score: 120.03 E-value: 3.71e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPL-TENNKYIQSITLcLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGI- 78
Cdd:PRK12645 242 PVSAYLHSATMVKAGIYLVARFTPIfAGSQVWFWTVTL-VGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIg 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 79 ----------NQPYL-----AFLHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMP 143
Cdd:PRK12645 321 aaslhyqgddSKIYAaaitaAIFHLINHATFKGSLFMIVGIVDHETG-TRDIRKLGGLMTIMPITFTIALIGALSMAGLP 399
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 23495647 144 FLTGFYSKDLIIEA------ANTSYTNAWALLMTLIA---TSFTAIYSTRIIFFALLGQPR 195
Cdd:PRK12645 400 PFNGFLSKEMFFESmlnateANLFSLDTWGVLFPVIAwvaSVFTFVYSIIFIFKTFFGKYK 460
|
|
| PRK08375 |
PRK08375 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-194 |
8.00e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236251 [Multi-domain] Cd Length: 487 Bit Score: 117.67 E-value: 8.00e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFY-----PLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVT 75
Cdd:PRK08375 234 PVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAYSTVSQMGYILLG 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 76 IGINQP---YLAFLHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKD 152
Cdd:PRK08375 314 LALLTPlalAAGLLHLLHHALMKGALFLAAGAIEVTYG-TRRLSELSGLGRRMPLTAAAFAVASLSLIGVPPTSGFVSKW 392
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 23495647 153 LIIEAANtsYTNAWALLMTLIATSF-TAIYSTRIIFFALLGQP 194
Cdd:PRK08375 393 YLVVGAV--EAGQWLVLAVLLASSLlALLYFLRIWYRAFFGPP 433
|
|
| PRK12667 |
PRK12667 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-195 |
8.43e-30 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237167 [Multi-domain] Cd Length: 520 Bit Score: 117.76 E-value: 8.43e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLhSSTMVVAGIFLLIRFY--------PLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLM 72
Cdd:PRK12667 256 PVSAML-SGLVVNVGAYAIIRFLytifgispSLIDFRAALSPILIILGAVSAIIGALMMVVQKDVKRLLAYSTISHMGYI 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 73 MVTIGINQPYL---AFLHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFY 149
Cdd:PRK12667 335 FMGIGIGTQLGlaaALFHIINHAIAKSLLFLASGVFIHAAG-TRDIDELAGLGRKMPIASFAFLIGALSLVGIPPLNGFF 413
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 23495647 150 SKDLIIEAAnTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQPR 195
Cdd:PRK12667 414 SKLLLFNAL-LESGFYLPALVLLIASAISLVGYFRAWYSLFFGKPK 458
|
|
| PRK12646 |
PRK12646 |
DUF4040 family protein; |
1-204 |
2.94e-28 |
|
DUF4040 family protein;
Pssm-ID: 183646 [Multi-domain] Cd Length: 800 Bit Score: 114.47 E-value: 2.94e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYP-LTENNKYIQSITLcLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGIN 79
Cdd:PRK12646 242 PVSAYLHSATMVKAGIFLLFRFTPlLGLSNMYIYIVTF-VGLITMLFGSITALKQWDLKGILAYSTISQLGMIMAMVGIG 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 80 QPYL-----------------AFLHICTHAFFKAMLFMCSGSIIHSlNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGM 142
Cdd:PRK12646 321 GGYAqhqqdaiasiyvfvlfaALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIRILSGMRQLFPKMNLVMTIAALSMAGV 399
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 23495647 143 PFLTGFYSKDLIIEA-ANTSYTNAWALLMT-------LIATSFTAIYSTRII---FFALLGQPRFPTlVNINE 204
Cdd:PRK12646 400 PFLNGFLSKEMFLDAlTQTGQLSQFSLISMiiivfigVIASIFTFTYALYMVkevFWGKYDSKVFTK-KNIHE 471
|
|
| PRK12649 |
PRK12649 |
putative monovalent cation/H+ antiporter subunit A; Reviewed |
1-263 |
2.99e-25 |
|
putative monovalent cation/H+ antiporter subunit A; Reviewed
Pssm-ID: 183649 [Multi-domain] Cd Length: 789 Bit Score: 105.68 E-value: 2.99e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGI-- 78
Cdd:PRK12649 246 PVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTISQLAYLMTMYGYtt 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 79 -NQPYLAF----LHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDL 153
Cdd:PRK12649 326 yHEPGLGVaaatFHLLNHATFKACLFLVAGIVAHEAA-TRDIRKLGGLRKEMPITFIVASIAALAMAGIPPLNGFLSKEM 404
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 154 IIEAA---NTSYTNAWALLMTLIATS---FTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIG-----SLF 222
Cdd:PRK12649 405 FYETSvemGALIGGPFTIIIPAVAVLggvFTFAYSIKLIDGIFLGERTHDHLPHHIHEAPYVMLIPAAFLAGlvilfGLV 484
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 23495647 223 AGYIISNNIPPTTIPQMTMPYYLK-------TTALIVTILGFILALEI 263
Cdd:PRK12649 485 PSIPIHNIIEPATSGIVLETAHLHvklwhgfTPALMMTIITFILGLLI 532
|
|
| PRK12668 |
PRK12668 |
Na(+)/H(+) antiporter subunit D; |
15-195 |
1.54e-24 |
|
Na(+)/H(+) antiporter subunit D;
Pssm-ID: 237168 [Multi-domain] Cd Length: 581 Bit Score: 103.05 E-value: 1.54e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 15 GIFLLIRFYPLTEnnkyiqsITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYL---AFLHICTH 91
Cdd:PRK12668 229 AVYALARAFPGTE-------LLIYIGAAMAVYGVFFALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNH 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 92 AFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYtNAWALLMT 171
Cdd:PRK12668 302 ILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRSMPLTALFCLVGALSISAFPLFSGFVSKSMIISAAGEDH-YVWVWLLL 379
|
170 180
....*....|....*....|....*
gi 23495647 172 LIATSFTAIYST-RIIFFALLGQPR 195
Cdd:PRK12668 380 LLASAGTFLHFGiKLPYFAFFGGDS 404
|
|
| PRK06521 |
PRK06521 |
hydrogenase 4 subunit B; Validated |
1-195 |
1.70e-24 |
|
hydrogenase 4 subunit B; Validated
Pssm-ID: 235820 [Multi-domain] Cd Length: 667 Bit Score: 103.04 E-value: 1.70e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLhSSTMVVAGIFLLIR--FYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGI 78
Cdd:PRK06521 243 HVSALM-SGVMLKVAIYGILRvvFDLLGAPGWWWGVLVLALGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGL 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 79 -------NQPYLAFL-------HICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPF 144
Cdd:PRK06521 322 amvfiayGMPLLAALaltaalyHLLNHALFKSLLFLGAGAVLHATG-TRDMEKLGGLIRRMPWTAWAFLIGCLAISALPP 400
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 23495647 145 LTGFYSKDLIIEAA-NTSYTNAWALLMT-------------LIATSFTAIYStrIIFfalLGQPR 195
Cdd:PRK06521 401 LNGFVSEWLLLQSLlSSPGLPQWGLKLAvpiaaamlaltaaLAAMCFVKFYG--ITF---LGRPR 460
|
|
| PRK07234 |
PRK07234 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-234 |
1.32e-22 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235978 [Multi-domain] Cd Length: 470 Bit Score: 96.94 E-value: 1.32e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSItlcLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINq 80
Cdd:PRK07234 216 PPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRI---FGVGTALLGVLFALLEKDLKRMLAFSTISQLGFILAAPLVG- 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 pylAFLHIcTHAFFKAMLFMCSGsIIHSLNDEQDIRKMGGLFKAMPftttaLIVGSLALTGMPFLTGFYSKDLIIEAANT 160
Cdd:PRK07234 292 ---GLYAL-AHGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIP-----LTMASFSIAGFPLLAGFVSKVLTLKNLLP 361
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 23495647 161 sytnaWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIISNNIPPT 234
Cdd:PRK07234 362 -----WQAIALNLAAVGTAASFWKFIFLPFSADDEDKKPLPGFWNAIALLLGGLFLANGVYTEAYTLGNILKAL 430
|
|
| PRK06525 |
PRK06525 |
hydrogenase 4 subunit D; Validated |
1-182 |
2.48e-21 |
|
hydrogenase 4 subunit D; Validated
Pssm-ID: 180606 [Multi-domain] Cd Length: 479 Bit Score: 93.50 E-value: 2.48e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFY----PLTENNKYIQSItlcLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTI 76
Cdd:PRK06525 239 PASAYLHAASMVKVGVYIFARAIqsmgPIPHVIGYVGAV---MAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGL 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 77 --GINQPYLAF----LHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYS 150
Cdd:PRK06525 316 slAILGSRLALegsiAYIFNHAFAKSLFFLVAGALSYSCG-TRLLPRLRGVLKKLPLVGVGFCVAALAITGVPPFNGFFS 394
|
170 180 190
....*....|....*....|....*....|..
gi 23495647 151 KDLIIEAANTSYTNAWALLMTLIATSFTAIYS 182
Cdd:PRK06525 395 KFPIFAAGFELSVEYWILLPAMVLLLIESVAS 426
|
|
| PRK06589 |
PRK06589 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
1-227 |
1.23e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 235835 [Multi-domain] Cd Length: 489 Bit Score: 91.42 E-value: 1.23e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIQSIT-----LCLGAITTLFTA-MCALTQNDIKKIIAFSTSSQLGLMMV 74
Cdd:PRK06589 242 PVSALLHAVIVVKTGLFCIYKILLYIFGLSYLQRIFaefnwLIFIPIVSIFYSsLKALKTDNIKKILAYSTISQLSLALL 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 75 TIGINQPY---LAFLHICTHAFFKAMLFMCSGSIIhSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSK 151
Cdd:PRK06589 322 SAFILTPKalgAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLISFIISISSLSLIGIPIFSGFISK 400
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 23495647 152 DLIIEAANTSYTNAWALLMTL---IATSFTAIYSTRIIFFALlgQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYII 227
Cdd:PRK06589 401 FLILLAASEQNQPWLSIIVMLvviASSILSALYLLKILSSIY--KPSLSENSFITKSLPYLMQISVITCCCALTLFYFI 477
|
|
| PRK08667 |
PRK08667 |
hydrogenase membrane subunit; Validated |
1-173 |
1.52e-20 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 236331 [Multi-domain] Cd Length: 644 Bit Score: 91.72 E-value: 1.52e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLhSSTMVVAGIFLLIRFY-PLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGI- 78
Cdd:PRK08667 238 NVSALM-SGVMLKVAVYGLVRFLmDVLSPELWWGVLILLAGSISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLy 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 79 ------NQPYLAFL-------HICTHAFFKAMLFMCSGSIIHSLNDeQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFL 145
Cdd:PRK08667 317 vifgvyGLDTLALLalggalfHSLNHALFKSLLFLTAGSVVHATGT-RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPF 395
|
170 180
....*....|....*....|....*...
gi 23495647 146 TGFYSKDLIIEAANTSYTNAWALLMTLI 173
Cdd:PRK08667 396 NGFASELLLYESFFQSFSVADPLIKILL 423
|
|
| PRK08376 |
PRK08376 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
2-194 |
5.00e-20 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 236252 [Multi-domain] Cd Length: 521 Bit Score: 89.77 E-value: 5.00e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 2 VSALLHSSTmvVAGIFLLIR----FYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIG 77
Cdd:PRK08376 254 ISAMLLVIK--QAGLYALARvlfsIYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQIGYMLLGLG 331
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 78 INQPYL---------------AFLHICTHAFFKAMLFMCSGSIIHSLNdEQDIRKMGGLFKAMPFTTTALIVGSLALTGM 142
Cdd:PRK08376 332 VGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETG-TRNLNELGGLARTMPKTTIAFLIGAAAIVGL 410
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 23495647 143 PFLTGFYSKDLIIEAanTSYTNAWALLMTLIATSFTAIYSTRIIFFALLGQP 194
Cdd:PRK08376 411 PPFNGFASKWLIYES--SALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPP 460
|
|
| NuoM |
COG1008 |
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ... |
1-195 |
9.25e-20 |
|
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440632 [Multi-domain] Cd Length: 488 Bit Score: 88.98 E-value: 9.25e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLhSSTMVVAGIFLLIRF-YPLT-ENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMV---- 74
Cdd:COG1008 242 AGSVLL-AGVLLKMGGYGLLRFaLPLFpEASAYFAPLLAALGVIGIIYGALVALAQTDLKRLIAYSSVSHMGFVLLgifa 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 75 --TIGINQpylAFLHICTHAFFKAMLFMCSGSIIHSLNDeQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKD 152
Cdd:COG1008 321 lnPLGLQG---AVLQMVSHGLITAALFLLVGVLYDRTHT-RDIADLGGLAKRMPVLAALFLLAALASLGLPGTSGFVGEF 396
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 23495647 153 LIIEAANTSYTnAWALLMTLiATSFTAIYSTRIIFFALLGQPR 195
Cdd:COG1008 397 LVLLGAFQVNP-WLAILAAL-GLILTAAYLLWMYQRVFFGPLK 437
|
|
| PRK08377 |
PRK08377 |
NADH dehydrogenase subunit N; Validated |
1-186 |
1.52e-19 |
|
NADH dehydrogenase subunit N; Validated
Pssm-ID: 181406 [Multi-domain] Cd Length: 494 Bit Score: 88.29 E-value: 1.52e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLhSSTMVVAGIFLLIRFYPLTENNKYIQSIT---LCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIG 77
Cdd:PRK08377 239 PITVMF-SAFVVKAGLYAMARILYLMQNANGWSSVLklvIIMATLTVFFAELSALRQKNVKRMIAYSSIGQVGMIALALA 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 78 INQPY---LAFLHICTHAFFKAMLFMCSGSIIHSLNDEQdIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLI 154
Cdd:PRK08377 318 LGTQAgvdAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFNVFWSKFRI 396
|
170 180 190
....*....|....*....|....*....|...
gi 23495647 155 IEAA-NTSYTnaWALLMTLIATSFTAIYSTRII 186
Cdd:PRK08377 397 ILAGlSAGYT--WPVALVLGASVVEAVYYFRLI 427
|
|
| PRK08668 |
PRK08668 |
NADH dehydrogenase subunit M; Validated |
39-158 |
4.10e-19 |
|
NADH dehydrogenase subunit M; Validated
Pssm-ID: 236332 [Multi-domain] Cd Length: 610 Bit Score: 87.36 E-value: 4.10e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 39 LGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFMCSGSIIHSlNDEQDI 115
Cdd:PRK08668 278 LGNISIIVGTLMAILQEDIKKLIAYSSVANGGYILVGLGLGTSLGfagGLFHVFNHALFKGLFFLIFAAVIYR-TGTTKI 356
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 23495647 116 RKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAA 158
Cdd:PRK08668 357 SEMGGLIEKMPFTFAMYLVAIISLAGIPPMSGFASKWLIFEAL 399
|
|
| PRK08168 |
PRK08168 |
NADH-quinone oxidoreductase subunit L; |
1-140 |
3.69e-18 |
|
NADH-quinone oxidoreductase subunit L;
Pssm-ID: 236171 [Multi-domain] Cd Length: 516 Bit Score: 84.36 E-value: 3.69e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGiFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:PRK08168 232 PVSALLHAGVVNLGG-FVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGL 310
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 23495647 81 PYLAFLHICTHAFFKAMLFMCSGSII-----HSLNDEQDIRKMGGLFKAmPFTTTALIVGSLALT 140
Cdd:PRK08168 311 YELALLHLVAHSLYKAHAFLSASEAVrdtrlRRLQGPQSAAGVVSLLLA-PLLSAALVLLLQSLL 374
|
|
| PRK06458 |
PRK06458 |
hydrogenase 4 subunit F; Validated |
1-187 |
3.71e-18 |
|
hydrogenase 4 subunit F; Validated
Pssm-ID: 235805 [Multi-domain] Cd Length: 490 Bit Score: 84.21 E-value: 3.71e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAgIFLLIRFYPLTE---NNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIG 77
Cdd:PRK06458 247 PVSALLSGVLLNVA-LYAVLRYYILIDaaiGSDFPGRLLLIFGLLSVLVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALG 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 78 INQPY---LAFLHICTHAFFKAMLFMCSGSIIHSLnDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLI 154
Cdd:PRK06458 326 IGGPLgifAALLHMLNHSLTKSAIFFASGNVLQKY-GTRDINVIRGLLKVSPLTGWGLMLGALAIAGMPPFGVFISEFLI 404
|
170 180 190
....*....|....*....|....*....|....*.
gi 23495647 155 IEAA-NTSYTNAWALLMTLIATSFTAIYS--TRIIF 187
Cdd:PRK06458 405 LTAGlARGPLLIAILLLLLLTLAFAALVRrvAGMVF 440
|
|
| PRK12662 |
PRK12662 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
37-186 |
3.48e-17 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 183662 [Multi-domain] Cd Length: 492 Bit Score: 81.32 E-value: 3.48e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 37 LCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFMCSGSIIHSLnDEQ 113
Cdd:PRK12662 283 MILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKSALFMVSGSISYHF-GTT 361
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 23495647 114 DIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSytNAWALLMTLIATSFTA-IYSTRII 186
Cdd:PRK12662 362 KLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKS--NAWIGLVVLLVGSGLSvIYVWKIV 433
|
|
| PRK12663 |
PRK12663 |
Na+/H+ antiporter subunit D; |
2-224 |
6.80e-17 |
|
Na+/H+ antiporter subunit D;
Pssm-ID: 237163 [Multi-domain] Cd Length: 497 Bit Score: 80.38 E-value: 6.80e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 2 VSALLhSSTMVVAGIFLLIRFYPL--TENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGIN 79
Cdd:PRK12663 240 VAALF-AALLTKVGIYALIRVFTLlfPQERELLHPLLATMAAITMVIGALGALAYKDIRRIAGYQVISSIGFILLGLALG 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 80 QP--------YLAFLHIcthafFKAMLFMCSGSIIHsLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSK 151
Cdd:PRK12663 319 TPagingaifYLVHDMV-----VKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLILIFAIGGLPPFSGFWGK 392
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 23495647 152 DLIIEAANTSytNAWALLMTLIATSFTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAG 224
Cdd:PRK12663 393 VLLVQGALDN--GAYILLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLYRKLPLSILAVVVIAMG 463
|
|
| PRK07691 |
PRK07691 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
15-158 |
1.65e-14 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 181085 [Multi-domain] Cd Length: 496 Bit Score: 73.44 E-value: 1.65e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 15 GIFLLIRFYPL--TENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYL---AFLHIC 89
Cdd:PRK07691 255 GVYAIARTFTLffSHDTSFTHYLILILALLTIIFGVIGAVAYFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLI 334
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 23495647 90 THAFFKAMLFMCSGSIIHsLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAA 158
Cdd:PRK07691 335 HDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGWMFFIAALSLAGIPPLSGFYGKFFIVEGT 402
|
|
| ND5 |
MTH00063 |
NADH dehydrogenase subunit 5; Provisional |
1-191 |
1.73e-14 |
|
NADH dehydrogenase subunit 5; Provisional
Pssm-ID: 214414 [Multi-domain] Cd Length: 522 Bit Score: 73.37 E-value: 1.73e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVAGIFLLIRFYPLTENNKYIqSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:MTH00063 189 PVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLS-IFFSVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGD 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 81 PYLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIR-----KMGGLFkaMPFTTTALIVGslaLTGMPFLTGFYSKDLII 155
Cdd:MTH00063 268 VILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQSSNcvyssILYGSW--NLFYLFLLVLG---LSGVPFIGVFFSKHFLL 342
|
170 180 190
....*....|....*....|....*....|....*.
gi 23495647 156 EAANTSYTNAWALLMTLIATSFTAIYSTRiiFFALL 191
Cdd:MTH00063 343 SSFSSVVFNVSLLLVVILCVFLSYLYSFR--LCLIL 376
|
|
| PRK08676 |
PRK08676 |
hydrogenase membrane subunit; Validated |
2-181 |
2.90e-14 |
|
hydrogenase membrane subunit; Validated
Pssm-ID: 181537 [Multi-domain] Cd Length: 485 Bit Score: 72.48 E-value: 2.90e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 2 VSALLhSSTMVVAGIFLLIRFYPLTENNK---YIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGI 78
Cdd:PRK08676 240 VSALL-SGTVLNIGIYGILRLSALLRQSGaaeQFSNVLIGLGIFSIAVAAFSMLSQRNLKKLIAFSSIEHMGLMLLGIGI 318
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 79 NQP---YLAFLHICTHAFFKAMLFMCSGsIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSK-DLI 154
Cdd:PRK08676 319 GTPlalFWMLFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQPVAAWGVILGSAAIIGMPPFPLFLSKfFIL 397
|
170 180
....*....|....*....|....*...
gi 23495647 155 IEAANTS-YTNAWALLMTLIATSFTAIY 181
Cdd:PRK08676 398 LQLGGISvWLVLAVLLLLLLAASSFAIF 425
|
|
| PRK05846 |
PRK05846 |
NADH:ubiquinone oxidoreductase subunit M; Reviewed |
8-182 |
4.29e-14 |
|
NADH:ubiquinone oxidoreductase subunit M; Reviewed
Pssm-ID: 235622 [Multi-domain] Cd Length: 497 Bit Score: 72.16 E-value: 4.29e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 8 SSTMVVAGIFL------LIRF-YPLTEN-NKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLmmVTIGI- 78
Cdd:PRK05846 244 AGSVLLAGILLkmgaygLLRFsLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGF--VTLGIf 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 79 --NQPYL--AFLHICTHAFFKAMLFMCSGSIIHSLNDEqDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLI 154
Cdd:PRK05846 322 agNQLGIqgAIFQMISHGLSSAALFLLVGVLYDRLHTR-DIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLI 400
|
170 180 190
....*....|....*....|....*....|.
gi 23495647 155 IEAANTSYTnawalLMTLIATS---FTAIYS 182
Cdd:PRK05846 401 LLGSFQVNP-----VIAFIATTgliLAAVYS 426
|
|
| PRK08042 |
PRK08042 |
formate hydrogenlyase subunit 3; Reviewed |
37-157 |
2.96e-13 |
|
formate hydrogenlyase subunit 3; Reviewed
Pssm-ID: 181206 [Multi-domain] Cd Length: 593 Bit Score: 69.86 E-value: 2.96e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 37 LCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIG-------INQPYLAFL-------HICTHAFFKAMLFMCS 102
Cdd:PRK08042 249 LVLGMITAFVGGLYALMEHNIQRLLAYHTLENIGIILLGLGagvtgiaLEQPALIALglvgglyHLLNHSLFKSVLFLGA 328
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 23495647 103 GSIIHSlNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEA 157
Cdd:PRK08042 329 GSVWFR-TGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQS 382
|
|
| PRK06277 |
PRK06277 |
energy conserving hydrogenase EhbF; |
2-187 |
4.47e-12 |
|
energy conserving hydrogenase EhbF;
Pssm-ID: 235767 [Multi-domain] Cd Length: 478 Bit Score: 66.21 E-value: 4.47e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 2 VSALLHSS---TMVVAGIFLLIRFYPLTENNKyIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGI 78
Cdd:PRK06277 233 GSALLQTFskfVLVALMLVIFKLFGGLSYFPS-AQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLAL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 79 NQPY---LAFLHICTHAFFKAMLFMCSGsIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLII 155
Cdd:PRK06277 312 GTPLgivAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLA 390
|
170 180 190
....*....|....*....|....*....|....
gi 23495647 156 EAANTSYTNAWALLMTL--IATSFTAIYSTRIIF 187
Cdd:PRK06277 391 QAAMQANMPELAIIMIIvsIGTFVSMMKAFYLIY 424
|
|
| PRK12561 |
PRK12561 |
NAD(P)H-quinone oxidoreductase subunit 4; Provisional |
1-150 |
7.98e-11 |
|
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
Pssm-ID: 237137 [Multi-domain] Cd Length: 504 Bit Score: 62.36 E-value: 7.98e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSallhsstMVVAGIFL------LIRF--YPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLM 72
Cdd:PRK12561 218 PVS-------MILAGVLLkmggyaLIRFnvQMLPDAHVYFAPALAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFV 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 73 MVTI------GINQpylAFLHICTHAFFKAMLFMCSGSI---IHSLNdeqdIRKMGGLFKAMP-----FTTTALivGSLA 138
Cdd:PRK12561 291 LLGIaaftdlGISG---AMLQMISHGLIAAALFFLTGVTyerTHTLS----IPNMGGLAKVMPktfalFTASSM--ASLA 361
|
170
....*....|..
gi 23495647 139 LTGMpflTGFYS 150
Cdd:PRK12561 362 LPGM---SGFVS 370
|
|
| NuoN |
COG1007 |
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ... |
1-194 |
1.88e-10 |
|
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase
Pssm-ID: 440631 [Multi-domain] Cd Length: 473 Bit Score: 61.29 E-value: 1.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLhSSTMVVAGIFLLIRF--YPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGI 78
Cdd:COG1007 236 PVTAFL-ATAPKIAAFAALLRLlvEAFPGLAADWQLLLAVLAVLSMTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAA 314
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 79 NQP---YLAFLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLII 155
Cdd:COG1007 315 GTPlgvSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAGLARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVF 394
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 23495647 156 EAA-NTSYTnaWALLMTLIATSFTAIYSTRIIFFALLGQP 194
Cdd:COG1007 395 SAAvEAGLY--WLAVIAVLNSVISAYYYLRVVKAMYFDEP 432
|
|
| PRK08601 |
PRK08601 |
NADH dehydrogenase subunit 5; Validated |
1-106 |
7.48e-10 |
|
NADH dehydrogenase subunit 5; Validated
Pssm-ID: 236310 [Multi-domain] Cd Length: 509 Bit Score: 59.28 E-value: 7.48e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSStMVVAGIFLLIRFYPLTeNNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQ 80
Cdd:PRK08601 236 PVSAIMHAG-LVNAGGIMLTRFSPLF-HDDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFMLVQCALGA 313
|
90 100
....*....|....*....|....*.
gi 23495647 81 PYLAFLHICTHAFFKAMLFMCSGSII 106
Cdd:PRK08601 314 YSAAIIHLILHGLFKATLFLQSGSAV 339
|
|
| PRK06473 |
PRK06473 |
NADH-quinone oxidoreductase subunit M; |
1-181 |
2.62e-08 |
|
NADH-quinone oxidoreductase subunit M;
Pssm-ID: 235810 [Multi-domain] Cd Length: 500 Bit Score: 54.71 E-value: 2.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLhSSTMVVAGIFLLIRF--YPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGI 78
Cdd:PRK06473 238 PVSVLL-AGVLLKLGTYGLLRFgvGLFPEAWVYLAPWLATWAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAA 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 79 NQPY---LAFLHICTHAFFKAMLFMCSGsIIHSLNDEQDIRKMGGLF---KAMPFTTTALIVGSLALTGMPFLTGFYSKD 152
Cdd:PRK06473 317 ATPLsilAAVFQMISHGLISALLFLLVG-VVYKKTGSRDVDVLRGLLnpeRGLPITGSLMILGVMASAGIPGMVGFIAEF 395
|
170 180
....*....|....*....|....*....
gi 23495647 153 LIIEAANTSYtnAWALLMTLIATSFTAIY 181
Cdd:PRK06473 396 LVFRGSFPIF--PVQTLLCMIGTGLTAVY 422
|
|
| PRK12665 |
PRK12665 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
15-181 |
3.74e-08 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237165 [Multi-domain] Cd Length: 521 Bit Score: 54.20 E-value: 3.74e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 15 GIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY---LAFLHICTH 91
Cdd:PRK12665 255 GVYAIIRTHTLLFPGGGLDTLLMVVALLTMVVGILGAIAQSDIKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHH 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 92 AFFKAMLFMCSGsIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEA-ANTSYTNAWALLM 170
Cdd:PRK12665 335 ITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVLFFVPALNLGGIPPFSGFIGKVALLEAgAEDGTWLAWALVA 413
|
170
....*....|.
gi 23495647 171 TLIATSFTAIY 181
Cdd:PRK12665 414 GGVVTSLLTLY 424
|
|
| PRK12664 |
PRK12664 |
putative monovalent cation/H+ antiporter subunit D; Reviewed |
34-164 |
1.00e-07 |
|
putative monovalent cation/H+ antiporter subunit D; Reviewed
Pssm-ID: 237164 [Multi-domain] Cd Length: 527 Bit Score: 52.81 E-value: 1.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 34 SITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPY-----LAFLHICTHAFFKAMLFMCSGSIIHS 108
Cdd:PRK12664 202 EILLFLGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVINR 281
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 23495647 109 lNDEQDIRKMGGLFKaMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSYTN 164
Cdd:PRK12664 282 -TRKFNLNRVGGLFK-MSLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLT 335
|
|
| PRK05777 |
PRK05777 |
NADH-quinone oxidoreductase subunit NuoN; |
1-201 |
5.45e-07 |
|
NADH-quinone oxidoreductase subunit NuoN;
Pssm-ID: 235603 [Multi-domain] Cd Length: 476 Bit Score: 50.59 E-value: 5.45e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLHSSTMVVA-GIFLLIRFYPLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMV--TIG 77
Cdd:PRK05777 237 PVTAFLATAPKIAAfAVLLRLLVVAFGGLSEDWQQVLAIIAIASMLVGNLAALSQTNIKRLLAYSSIAHAGYLLVglAAG 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 78 INQPYLA-FLHICTHAFFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIE 156
Cdd:PRK05777 317 TAEGYSAvLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFMLSLAGIPPTAGFWGKFYVFE 396
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 23495647 157 AANTSYTNAWALLMtLIATSFTAIYSTRIIFFALLGQPRFPTLVN 201
Cdd:PRK05777 397 AAVEAGLWWLAVIG-VLNSAIGAFYYLRVIKLMYFDEPPRDAPVN 440
|
|
| ndhB |
CHL00049 |
NADH dehydrogenase subunit 2 |
1-241 |
3.89e-06 |
|
NADH dehydrogenase subunit 2
Pssm-ID: 176990 [Multi-domain] Cd Length: 494 Bit Score: 48.08 E-value: 3.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLhSSTMVVAGIFLLIR-----FYPLTENNKYIQSITLCLgaiTTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVT 75
Cdd:CHL00049 247 PVVAFL-SVTSKVAASALATRifdipFYFSSNEWHLLLEILAIL---SMILGNLIAITQTSMKRMLAYSSIGQIGYVIIG 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 76 IGINQPYLAFLHICTHAFFkaMLFMCSGS----IIHSLNDEQD-IRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYS 150
Cdd:CHL00049 323 IIVGDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRTGTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFG 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 151 KDLIIEAANTSytNAWALLMTLIATSFTAIY-STRIIFFALLGQPRFPTLVNINENNPLLI--NSIKRLLI----GSLFA 223
Cdd:CHL00049 401 KLYLFWCGWQA--GLYFLVSIGLLTSVISIYyYLKIIKLLMTGRNQEITPYVRNYRRSPLRsnNSIELSMIvcviASTIP 478
|
250
....*....|....*...
gi 23495647 224 GYIISnniPPTTIPQMTM 241
Cdd:CHL00049 479 GISMN---PIIAIAQDTL 493
|
|
| ND2 |
MTH00196 |
NADH dehydrogenase subunit 2; Provisional |
34-219 |
1.84e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214453 [Multi-domain] Cd Length: 365 Bit Score: 45.79 E-value: 1.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 34 SITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQpyLAFLHIC-THAFFKAMLFMCSGSIIHSLNDE 112
Cdd:MTH00196 153 NILLIGGLFSLFVGAIGALNQTKIKRLLAYSGIGHMGFVLWGIEIGS--FESIQASlVYLFIYIIMSICVFSIILALNVY 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 113 QD-IRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAAnTSYTNAWALLMTLIATSFTAIYSTRIIFFALL 191
Cdd:MTH00196 231 KNlIIEFSGLSRRLPILAITLALTFLSIAGIPPLVGFLGKWLILLSG-VVYQYYLIFLLAVFCSVIAGVYYVRIVKILFF 309
|
170 180
....*....|....*....|....*...
gi 23495647 192 GQPRFPTLVNINENNPLLINSIKRLLIG 219
Cdd:MTH00196 310 QANSFLLISTKILKKENKINLRKALLIG 337
|
|
| ndhD |
CHL00011 |
NADH dehydrogenase subunit 4 |
7-180 |
3.18e-05 |
|
NADH dehydrogenase subunit 4
Pssm-ID: 176954 [Multi-domain] Cd Length: 498 Bit Score: 44.94 E-value: 3.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 7 HSST-MVVAGIFL------LIRF-YPLTENNKYIQSITLCL-GAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIG 77
Cdd:CHL00011 242 HYSTcMLLAGILLkmgaygLIRInMELLPHAHSIFSPWLVIvGAIQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIG 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 78 -INQPYL--AFLHICTHAFFKAMLFMCSGSI---IHSLNDEQdirkMGGLFKAMP--FTT-TALIVGSLALTGMpflTGF 148
Cdd:CHL00011 322 sITDTGLngAILQIISHGFIGAALFFLAGTSydrIRLVYLDE----MGGIAIPMPkiFTMfSSFSMASLALPGM---SGF 394
|
170 180 190
....*....|....*....|....*....|..
gi 23495647 149 YSKDLIIEAANTSytNAWALLMTLIATSFTAI 180
Cdd:CHL00011 395 VAELIVFFGIITS--QKYLLMPKILITFVMAI 424
|
|
| ND2 |
MTH00200 |
NADH dehydrogenase subunit 2; Provisional |
13-228 |
5.54e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 177246 [Multi-domain] Cd Length: 347 Bit Score: 44.19 E-value: 5.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 13 VAGIFLLIRFYPLTENNkyiqsITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINqPYLAFLHictha 92
Cdd:MTH00200 136 LAPFALLIQLAPALNSN-----ILLLLGLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLY----- 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 93 FFKAMLFMCSGSIIHSLNDEQDIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIeAANTSYTNAWALLMTL 172
Cdd:MTH00200 205 LLLYVIITLTVFLLLNLLNSTKINSLSSSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLIL-QELSKQGLFIYATILL 283
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 23495647 173 IATSFTAIYSTRIIFFALLGQPRFPTLVNINENNPLLINSIKRLLIGSLFAGYIIS 228
Cdd:MTH00200 284 LGSLLSLFFYLRLSYLTLLTLSPNQINMMSSWRTKSNSNLLVGLLLLLSILGLPLT 339
|
|
| ND2 |
MTH00112 |
NADH dehydrogenase subunit 2; Provisional |
3-156 |
7.06e-05 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214423 [Multi-domain] Cd Length: 346 Bit Score: 43.66 E-value: 7.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 3 SALLHSSTMVVAGIFLLirfypLTENNKYIQSITLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINqPY 82
Cdd:MTH00112 126 TALILSTWQKLAPLTLL-----LMTSNSLNPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYS-PK 199
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 23495647 83 LAFLHICTHAFFKAMLFMcsgsIIHSLNDEQdIRKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIE 156
Cdd:MTH00112 200 LTLLTFYIYILMTTPMFL----TLNTTSTKT-LKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTGFMPKWLILQ 268
|
|
| PRK02504 |
PRK02504 |
NAD(P)H-quinone oxidoreductase subunit N; |
1-181 |
9.32e-04 |
|
NAD(P)H-quinone oxidoreductase subunit N;
Pssm-ID: 235044 [Multi-domain] Cd Length: 513 Bit Score: 40.42 E-value: 9.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 1 PVSALLhSSTMVVAGIFLLIRFypltennkyiqsITLCLGAITT----LFTAMC----------ALTQNDIKKIIAFSTS 66
Cdd:PRK02504 243 PVVAFL-SVGSKAAGFALAIRL------------LVTAFPSFDEqwklLFTALAilsmvlgnvvALAQTSMKRMLAYSSI 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 67 SQLGLMMV--TIGINQPYLAF-LHICTHAFFKAMLFMCSgsIIHSLNDEQD-IRKMGGLFKAMPFTTTALIVGSLALTGM 142
Cdd:PRK02504 310 GQAGFVMIglVAGTEAGYASMvFYLLAYLFMNLGAFACV--ILFSLRTGTDqISDYAGLYQKDPLLTLGLSLCLLSLGGI 387
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 23495647 143 PFLTGFYSKDLIIEA--ANTSYtnaWALLMTLIaTSFTAIY 181
Cdd:PRK02504 388 PPLAGFFGKIYLFWAgwQAGLY---LLVLVGLV-TSVISIY 424
|
|
| ND2 |
MTH00144 |
NADH dehydrogenase subunit 2; Provisional |
13-181 |
5.56e-03 |
|
NADH dehydrogenase subunit 2; Provisional
Pssm-ID: 214432 [Multi-domain] Cd Length: 328 Bit Score: 37.94 E-value: 5.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 13 VAGIFLLIRFYPLTENNKYIqsitLCLGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQP--YLAFLHICT 90
Cdd:MTH00144 128 VAPLFLLSNFLDLYWLAYLL----CVISVLSALVGSIGGLNQTQVRALLAYSSISHTGWMLVAILHGSWlmWMYFLIYIV 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 23495647 91 HAFFkaMLFMCSGSIIHSLndeqdirKMGGLFKAMPFTTTALIVGSLALTGMPFLTGFYSKDLIIEAANTSytNAWALLM 170
Cdd:MTH00144 204 SSGF--LFFSLWSGDSGSM-------KDLGSLKPSYKTGLSIISLLLSLGGLPPFLGFCSKLLVLISSMES--SPLLLIL 272
|
170
....*....|.
gi 23495647 171 TLIATSFTAIY 181
Cdd:MTH00144 273 LLLLGSLISLF 283
|
|
| |
