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Conserved domains on  [gi|24418919|ref|NP_722476|]
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glycogen phosphorylase, brain form [Mus musculus]

Protein Classification

glycogen/starch/alpha-glucan phosphorylase( domain architecture ID 10136827)

glycogen/starch/alpha-glucan phosphorylase uses phosphate to catalyze the cleavage of alpha 1,4-linkages between pairs of glucose residues at the end of glucose polymers or oligomers, releasing alpha-D-glucose 1-phosphate

CATH:  3.40.50.2000
CAZY:  GT35
EC:  2.4.1.1
PubMed:  11340058|11949930

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
GT35_Glycogen_Phosphorylase cd04300
glycogen phosphorylase and similar proteins; This is a family of oligosaccharide ...
29-828 0e+00

glycogen phosphorylase and similar proteins; This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.


:

Pssm-ID: 340853 [Multi-domain]  Cd Length: 795  Bit Score: 1455.81  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  29 RKSFNRHLHFTLVKDRNVATPRDYFFALAHTVRDHLVGRWIRTQQHYYERDPKRIYYLSLEFYMGRTLQNTMVNLGLQTA 108
Cdd:cd04300   1 KKSFVRHLEYTLGKDREEATPQDLYQALAYSVRDRLIERWNETQQYYYEKDPKRVYYLSLEFLMGRLLGNNLLNLGLYDE 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 109 CDEATYQLGLDLEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIVNGWQVEEADDWLRYGN 188
Cdd:cd04300  81 VREALAELGLDLEDLEEEEPDAALGNGGLGRLAACFLDSMATLGLPAWGYGIRYEYGLFKQKIVDGYQVELPDYWLRYGN 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 189 PWEKARPEYMLPVHFYGRVEHTPDG----VLWLDTQVVLAMPYDTPVPGYKNNTVNTMRLWSAKAPNDFKLKDFNVGDYI 264
Cdd:cd04300 161 PWEIRRPEVSVPVRFGGRVEEVPDGgrlrVRWVDGETVLAVPYDTPIPGYGTNTVNTLRLWSAKASDEFDLEAFNEGDYI 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 265 EAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSRFGCRDpvrtcfetFPDKVAIQLNDTHPA 344
Cdd:cd04300 241 RAVEQKNRAENISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRFKKSHGPLSE--------FPDKVAIQLNDTHPA 312
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 345 LSIPELMRILVDVEKVDWDKAWEITKKTCAYTNHTVLPEALERWPVSMFEKLLPRHLEIIYAINQRHLDHVAALFPGDVD 424
Cdd:cd04300 313 LAIPELMRILVDEEGLSWDEAWDITTKTFAYTNHTVLPEALEKWPVELFEKLLPRHLQIIYEINRRFLDEVRAKYPGDVD 392
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 425 RLRRMSVIEEGdcKRINMAHLCVIGSHAVNGVARIHSEIVKQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLAEII 504
Cdd:cd04300 393 RIRRMSIIEEG--KQVRMAHLAIVGSHSVNGVAALHTEILKTTVLKDFYELYPEKFNNKTNGITPRRWLLQANPGLAALI 470
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 505 VERIGEGFLTDLSQLKKLLSLVDDEAFIRDVAKVKQENKLKFSAQLEKEYKVKINPASMFDVHVKRIHEYKRQLLNCLHI 584
Cdd:cd04300 471 TETIGDDWVTDLDQLKKLEPFADDPEFLEEWAAIKQANKARLAAYIKETTGVEVNPNSIFDVQVKRIHEYKRQLLNILHI 550
                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 585 ITLYNRIKKDPAKAFVPRTVMIGGKAAPGYHMAKMIIKLVTSIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLS 664
Cdd:cd04300 551 IYLYLRIKEGPPADFVPRTVIFGGKAAPGYYLAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLS 630
                       650       660       670       680       690       700       710       720
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 665 QQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRVEDVEALDQKGYNAREFYERLPELRQAVD 744
Cdd:cd04300 631 EQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAEEVEALRKNGYYPADYYENDPRLKRVLD 710
                       730       740       750       760       770       780       790       800
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 745 QISSGFFSPKDPDCFKDVVNMLM-YHDRFKVFADYEAYIQCQAQVDRLYRNSKEWTKKVIRNIACSGKFSSDRTITEYAR 823
Cdd:cd04300 711 QIISGTFSPGDPDEFRPLVDSLLnGNDEYLVLADFESYVDAQEKVDALYRDQEEWARKSILNIARSGKFSSDRTIREYAK 790

                ....*
gi 24418919 824 EIWGV 828
Cdd:cd04300 791 DIWNV 795
 
Name Accession Description Interval E-value
GT35_Glycogen_Phosphorylase cd04300
glycogen phosphorylase and similar proteins; This is a family of oligosaccharide ...
29-828 0e+00

glycogen phosphorylase and similar proteins; This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.


Pssm-ID: 340853 [Multi-domain]  Cd Length: 795  Bit Score: 1455.81  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  29 RKSFNRHLHFTLVKDRNVATPRDYFFALAHTVRDHLVGRWIRTQQHYYERDPKRIYYLSLEFYMGRTLQNTMVNLGLQTA 108
Cdd:cd04300   1 KKSFVRHLEYTLGKDREEATPQDLYQALAYSVRDRLIERWNETQQYYYEKDPKRVYYLSLEFLMGRLLGNNLLNLGLYDE 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 109 CDEATYQLGLDLEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIVNGWQVEEADDWLRYGN 188
Cdd:cd04300  81 VREALAELGLDLEDLEEEEPDAALGNGGLGRLAACFLDSMATLGLPAWGYGIRYEYGLFKQKIVDGYQVELPDYWLRYGN 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 189 PWEKARPEYMLPVHFYGRVEHTPDG----VLWLDTQVVLAMPYDTPVPGYKNNTVNTMRLWSAKAPNDFKLKDFNVGDYI 264
Cdd:cd04300 161 PWEIRRPEVSVPVRFGGRVEEVPDGgrlrVRWVDGETVLAVPYDTPIPGYGTNTVNTLRLWSAKASDEFDLEAFNEGDYI 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 265 EAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSRFGCRDpvrtcfetFPDKVAIQLNDTHPA 344
Cdd:cd04300 241 RAVEQKNRAENISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRFKKSHGPLSE--------FPDKVAIQLNDTHPA 312
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 345 LSIPELMRILVDVEKVDWDKAWEITKKTCAYTNHTVLPEALERWPVSMFEKLLPRHLEIIYAINQRHLDHVAALFPGDVD 424
Cdd:cd04300 313 LAIPELMRILVDEEGLSWDEAWDITTKTFAYTNHTVLPEALEKWPVELFEKLLPRHLQIIYEINRRFLDEVRAKYPGDVD 392
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 425 RLRRMSVIEEGdcKRINMAHLCVIGSHAVNGVARIHSEIVKQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLAEII 504
Cdd:cd04300 393 RIRRMSIIEEG--KQVRMAHLAIVGSHSVNGVAALHTEILKTTVLKDFYELYPEKFNNKTNGITPRRWLLQANPGLAALI 470
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 505 VERIGEGFLTDLSQLKKLLSLVDDEAFIRDVAKVKQENKLKFSAQLEKEYKVKINPASMFDVHVKRIHEYKRQLLNCLHI 584
Cdd:cd04300 471 TETIGDDWVTDLDQLKKLEPFADDPEFLEEWAAIKQANKARLAAYIKETTGVEVNPNSIFDVQVKRIHEYKRQLLNILHI 550
                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 585 ITLYNRIKKDPAKAFVPRTVMIGGKAAPGYHMAKMIIKLVTSIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLS 664
Cdd:cd04300 551 IYLYLRIKEGPPADFVPRTVIFGGKAAPGYYLAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLS 630
                       650       660       670       680       690       700       710       720
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 665 QQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRVEDVEALDQKGYNAREFYERLPELRQAVD 744
Cdd:cd04300 631 EQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAEEVEALRKNGYYPADYYENDPRLKRVLD 710
                       730       740       750       760       770       780       790       800
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 745 QISSGFFSPKDPDCFKDVVNMLM-YHDRFKVFADYEAYIQCQAQVDRLYRNSKEWTKKVIRNIACSGKFSSDRTITEYAR 823
Cdd:cd04300 711 QIISGTFSPGDPDEFRPLVDSLLnGNDEYLVLADFESYVDAQEKVDALYRDQEEWARKSILNIARSGKFSSDRTIREYAK 790

                ....*
gi 24418919 824 EIWGV 828
Cdd:cd04300 791 DIWNV 795
Phosphorylase pfam00343
Carbohydrate phosphorylase; The members of this family catalyze the formation of glucose ...
141-828 0e+00

Carbohydrate phosphorylase; The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin.


Pssm-ID: 459770  Cd Length: 713  Bit Score: 1374.72  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   141 AACFLDSMATLGLAAYGYGIRYEFGIFNQKIVNGWQVEEADDWLRYGNPWEKARPEYMLPVHFYGRVEHTPDG----VLW 216
Cdd:pfam00343  29 AACFLDSLATLGLPAYGYGIRYEYGLFKQKIVDGWQVELPDNWLRFGNPWEIRRPEVAVEVKFGGRVEEYTDGgrlrVRW 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   217 LDTQVVLAMPYDTPVPGYKNNTVNTMRLWSAKAPNDFKLKDFNVGDYIEAVLDRNLAENISRVLYPNDNFFEGKELRLKQ 296
Cdd:pfam00343 109 VPGETVLAVPYDTPIPGYGTNTVNTLRLWSAEASEEFDLDAFNAGDYIRAVEEKNRAENISKVLYPNDSTEEGKELRLKQ 188
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   297 EYFVVAATLQDIIRRFKSsrfgcrdpVRTCFETFPDKVAIQLNDTHPALSIPELMRILVDVEKVDWDKAWEITKKTCAYT 376
Cdd:pfam00343 189 QYFFVSASLQDIIRRFKK--------GGGDLDELPDKVAIQLNDTHPALAIPELMRILVDEEGLGWDEAWDITTKTFAYT 260
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   377 NHTVLPEALERWPVSMFEKLLPRHLEIIYAINQRHLDHVAALFPGDVDRLRRMSVIEEGDCKRINMAHLCVIGSHAVNGV 456
Cdd:pfam00343 261 NHTLLPEALEKWPVDLFERLLPRHLEIIYEINRRFLEEVRAKFPGDEDRLRRMSIIEEGGDKQVRMAHLAIVGSHSVNGV 340
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   457 ARIHSEIVKQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLAEIIVERIGEGFLTDLSQLKKLLSLVDDEAFIRDVA 536
Cdd:pfam00343 341 AALHTELLKETVFKDFYELYPEKFNNKTNGITPRRWLLLANPELAALITETIGDGWITDLDQLKKLEPFADDPAFLERWR 420
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   537 KVKQENKLKFSAQLEKEYKVKINPASMFDVHVKRIHEYKRQLLNCLHIITLYNRIKKDPAKAFVPRTVMIGGKAAPGYHM 616
Cdd:pfam00343 421 AIKQANKQRLAAYIKKTTGIEVDPDSIFDVQVKRIHEYKRQLLNALHIITLYNRIKENPNADIVPRTFIFGGKAAPGYYM 500
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   617 AKMIIKLVTSIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGA 696
Cdd:pfam00343 501 AKLIIKLINSVAEVVNNDPDVNDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGA 580
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   697 NVEMAEEAGEENLFIFGMRVEDVEALDQKGYNAREFYERLPELRQAVDQISSGFFSPKDPDCFKDVVNMLM-YHDRFKVF 775
Cdd:pfam00343 581 NVEIREEVGEENIFIFGLTAEEVEALRAKGYNPRDYYESNPELKRVLDQIASGTFSPGDPGLFRPLVDSLLnGGDPYLVL 660
                         650       660       670       680       690
                  ....*....|....*....|....*....|....*....|....*....|...
gi 24418919   776 ADYEAYIQCQAQVDRLYRNSKEWTKKVIRNIACSGKFSSDRTITEYAREIWGV 828
Cdd:pfam00343 661 ADFESYVDAQERVDAAYRDREEWTRMSILNIARSGKFSSDRTIREYAEDIWKV 713
P_ylase TIGR02093
glycogen/starch/alpha-glucan phosphorylases; This family consists of phosphorylases. Members ...
32-828 0e+00

glycogen/starch/alpha-glucan phosphorylases; This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. [Energy metabolism, Biosynthesis and degradation of polysaccharides]


Pssm-ID: 273967  Cd Length: 794  Bit Score: 1346.54  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919    32 FNRHLHFTLVKDRNVATPRDYFFALAHTVRDHLVGRWIRTQQHYYERDPKRIYYLSLEFYMGRTLQNTMVNLGLQTACDE 111
Cdd:TIGR02093   1 ILYHLEYTYGKTIDDATPRDLYTALAKAVRDRLVDRWLETQEKYRDNNQKQVYYLSAEFLMGRLLGNNLLNLGLYDEVKE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   112 ATYQLGLDLEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIVNGWQVEEADDWLRYGNPWE 191
Cdd:TIGR02093  81 ALRELGLDLEEILEIENDAGLGNGGLGRLAACFLDSLATLGLPATGYGIRYEYGLFKQKIVDGWQVELPDDWLRYGNPWE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   192 KARPEYMLPVHFYGRVEHTPDG----VLWLDTQVVLAMPYDTPVPGYKNNTVNTMRLWSAKAPNDFKLKDFNVGDYIEAV 267
Cdd:TIGR02093 161 IRRPDRSYEVRFGGRVELQPDSdrlrPRWVPAETVLAIPYDVPVPGYRTDTVNTLRLWSAEAPEEFDLDAFNAGDYYEAV 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   268 LDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSsrfgcrdpVRTCFETFPDKVAIQLNDTHPALSI 347
Cdd:TIGR02093 241 EEKNRAENISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRHLE--------THPDLSDFPKKVAIQLNDTHPALAI 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   348 PELMRILVDVEKVDWDKAWEITKKTCAYTNHTVLPEALERWPVSMFEKLLPRHLEIIYAINQRHLDHVAALFPGDVDRLR 427
Cdd:TIGR02093 313 PELMRLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRRFLAELAAKGPGDEAKIR 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   428 RMSVIEEGDCKRINMAHLCVIGSHAVNGVARIHSEIVKQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLAEIIVER 507
Cdd:TIGR02093 393 RMSIIEEGQSKRVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYELYPEKFNNKTNGITPRRWLRLANPGLSALLTET 472
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   508 IGEGFLTDLSQLKKLLSLVDDEAFIRDVAKVKQENKLKFSAQLEKEYKVKINPASMFDVHVKRIHEYKRQLLNCLHIITL 587
Cdd:TIGR02093 473 IGDDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYL 552
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   588 YNRIKKDPAKAFVPRTVMIGGKAAPGYHMAKMIIKLVTSIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSQQI 667
Cdd:TIGR02093 553 YNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQI 632
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   668 STAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRVEDVEALDQKGYNAREFYERLPELRQAVDQIS 747
Cdd:TIGR02093 633 STAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFGLTVEEVEALREKGYNPREYYEADPELKRVLDLIS 712
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   748 SGFFSPKDPDCFKDVVNMLM-YHDRFKVFADYEAYIQCQAQVDRLYRNSKEWTKKVIRNIACSGKFSSDRTITEYAREIW 826
Cdd:TIGR02093 713 SGTFSPGDPGLFRPLYDSLLnHGDPFFVLADFAAYVDAQERVDALYRDQLEWTKKSILNIANSGKFSSDRTIREYAKEIW 792

                  ..
gi 24418919   827 GV 828
Cdd:TIGR02093 793 HV 794
GlgP COG0058
Glucan phosphorylase [Carbohydrate transport and metabolism];
24-828 0e+00

Glucan phosphorylase [Carbohydrate transport and metabolism];


Pssm-ID: 439828 [Multi-domain]  Cd Length: 795  Bit Score: 1229.62  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  24 DVAEVRKSFNRHLHFTLVKDRNVATPRDYFFALAHTVRDHLVGRWIRTQQHYYERDPKRIYYLSLEFYMGRTLQNTMVNL 103
Cdd:COG0058   4 NAEELFRAIDPELWETLGKRLEEAAADDWFLALAAAVRDYLSPRWFQTNRAYPDQKAKRVAYFSAEFLLGRSLGNNLLNL 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 104 GLQTACDEATYQLGLDLEELEEIEEDAglgngglgrlAACFLDSMATLGLAAYGYGIRYEFGIFNQKIVNGWQVEEADDW 183
Cdd:COG0058  84 GLYDEVREALAELGLDLEDLLEQEPDLplgngglgrlAADFLKSASDLGLPAVGYGLRYEYGYFRQRIDDGWQVERPDNW 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 184 LRYGNPWEKARPEYMLPVHFYGrvehtPDGvlwlDTQVVLAMPYDTPVPGYKNNTVNTMRLWSAKAPNDFKLKDFNVGDY 263
Cdd:COG0058 164 LRYGDPWELPRPEPAVEVKFGD-----EDG----RTEDVLAVPYDVPIPGYRNNTVNTLRLWKAEASEEVGLYLFDAGDY 234
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 264 IEAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSRfgcrdpvrTCFETFPDKVAIQLNDTHP 343
Cdd:COG0058 235 TDAVENKPEDRNITKVLYPGDSEEAGKELRLRQEYFLGSGGVRDLRRLHLKTG--------GDLDGLPEPVVIHLNDTHP 306
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 344 ALSIPELMRILVDVEKVDWDKAWEITKKTCAYTNHTVLPEALERWPVSMFEKLLPRHLEIIYAINQRHLDHVAALfPGDV 423
Cdd:COG0058 307 AFAILELMRLLVDEHGLSWDEAWEITRATFVFTNHTPVPEALERWPVDLFERLLPRHLEIIGEINRRFLEEVRAR-PGDR 385
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 424 DRLRRMSVIEEGdckRINMAHLCVIGSHAVNGVARIHSEIVKQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLAEI 503
Cdd:COG0058 386 ERLLRLGIIDEG---QFRMAHLALRGSHSVNGVSALHGEVLRETMFADFYPLWPVPFTNVTNGVHPRRWLLLANPELAEL 462
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 504 IVERIGEGFLTDLSQLKKLLSLVDDEAFIRDVAKVKQENKLKFSAQLEKEYKVKINPASMFDVHVKRIHEYKRQLLNCLH 583
Cdd:COG0058 463 ITEYIGDGWITDLELLEKLEPIADDPAFQEELWEVKQANKERLAAYIRERTGIVLDPDALFDGFAKRFHEYKRQLLNLLH 542
                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 584 IITLYNRIKKDPAKAFVPRTVMIGGKAAPGYHMAKMIIKLVTSIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADL 663
Cdd:COG0058 543 DIERYNRILNNPNLDERPRQFIFAGKAAPGDEMGKLIIKLINAVARVPNNDPRVEFRLKVVFLENYDVSLAEKLVPGADV 622
                       650       660       670       680       690       700       710       720
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 664 SQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRVEDVEALDQKgYNAREFYERLPELRQAV 743
Cdd:COG0058 623 WEQIPTAGKEASGTSGMKFALNGALTLGTLDGANVEIYEEVGDENGFAFGLTAEEVEALRAK-YNPRDYYEADPELRRVL 701
                       730       740       750       760       770       780       790       800
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 744 DQISSGFFSPkDPDCFKDVVNMLMYHDRFKVFADYEAYIQCQAQVDRLYRNSKEWTKKVIRNIACSGKFSSDRTITEYAR 823
Cdd:COG0058 702 DQLASGYFSP-DPEEFRALYDLLLGGDPYLVLADFASYVDAEEEVDPLYRRPERWVRMMILNIARLGKFSSDRMIREYAE 780

                ....*
gi 24418919 824 EIWGV 828
Cdd:COG0058 781 RIWKL 785
PRK14986 PRK14986
glycogen phosphorylase; Provisional
25-833 0e+00

glycogen phosphorylase; Provisional


Pssm-ID: 184948 [Multi-domain]  Cd Length: 815  Bit Score: 924.24  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   25 VAEVRKSFNRHLHFTLVKDRNVATPRDYFFALAHTVRDHLVGRWIRTQQHYYERDPKRIYYLSLEFYMGRTLQNTMVNLG 104
Cdd:PRK14986  14 VEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSNALLSLG 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  105 LQTACDEATYQLGLDLEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIVNGWQVEEADDWL 184
Cdd:PRK14986  94 IYDDVQGALEAMGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVNGRQKESPDYWL 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  185 RYGNPWEKARPEYMLPVHFYGRVEHTPDGVLWLDTQVVLAMPYDTPVPGYKNNTVNTMRLWSAKAPNDFKLKDFNVGDYI 264
Cdd:PRK14986 174 EYGNPWEFKRHNTRYKVRFGGRIQQEGKKTRWIETEEILAVAYDQIIPGYDTDATNTLRLWSAQASSEINLGKFNQGDYF 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  265 EAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSsrfgcrdpVRTCFETFPDKVAIQLNDTHPA 344
Cdd:PRK14986 254 AAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILSRHYQ--------LHKTYDNLADKIAIHLNDTHPV 325
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  345 LSIPELMRILVDVEKVDWDKAWEITKKTCAYTNHTVLPEALERWPVSMFEKLLPRHLEIIYAINQRHLDHVAALFPGDVD 424
Cdd:PRK14986 326 LSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYPNDTD 405
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  425 RLRRMSVIEEGDCKRINMAHLCVIGSHAVNGVARIHSEIVKQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLAEII 504
Cdd:PRK14986 406 LLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPGRFCNVTNGVTPRRWLALANPSLSAVL 485
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  505 VERIGEGFLTDLSQLKKLLSLVDDEAFIRDVAKVKQENKLKFSAQLEKEYKVKINPASMFDVHVKRIHEYKRQLLNCLHI 584
Cdd:PRK14986 486 DEHIGRTWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHV 565
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  585 ITLYNRIKKDPAKAFVPRTVMIGGKAAPGYHMAKMIIKLVTSIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLS 664
Cdd:PRK14986 566 ITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLS 645
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  665 QQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRVEDVEALDQKGYNAREFYERLPELRQAVD 744
Cdd:PRK14986 646 EQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNTAEEVEALRRQGYKPREYYEKDEELHQVLT 725
                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  745 QISSGFFSPKDPDCFKDVVNMLM-YHDRFKVFADYEAYIQCQAQVDRLYRNSKEWTKKVIRNIACSGKFSSDRTITEYAR 823
Cdd:PRK14986 726 QIGSGVFSPEEPGRYRDLVDSLInFGDHYQVLADYRSYVDCQDKVDELYRNQEEWTRKAMLNIANMGYFSSDRTIKEYAD 805
                        810
                 ....*....|
gi 24418919  824 EIWGVEPSDL 833
Cdd:PRK14986 806 EIWHIDPVRL 815
 
Name Accession Description Interval E-value
GT35_Glycogen_Phosphorylase cd04300
glycogen phosphorylase and similar proteins; This is a family of oligosaccharide ...
29-828 0e+00

glycogen phosphorylase and similar proteins; This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.


Pssm-ID: 340853 [Multi-domain]  Cd Length: 795  Bit Score: 1455.81  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  29 RKSFNRHLHFTLVKDRNVATPRDYFFALAHTVRDHLVGRWIRTQQHYYERDPKRIYYLSLEFYMGRTLQNTMVNLGLQTA 108
Cdd:cd04300   1 KKSFVRHLEYTLGKDREEATPQDLYQALAYSVRDRLIERWNETQQYYYEKDPKRVYYLSLEFLMGRLLGNNLLNLGLYDE 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 109 CDEATYQLGLDLEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIVNGWQVEEADDWLRYGN 188
Cdd:cd04300  81 VREALAELGLDLEDLEEEEPDAALGNGGLGRLAACFLDSMATLGLPAWGYGIRYEYGLFKQKIVDGYQVELPDYWLRYGN 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 189 PWEKARPEYMLPVHFYGRVEHTPDG----VLWLDTQVVLAMPYDTPVPGYKNNTVNTMRLWSAKAPNDFKLKDFNVGDYI 264
Cdd:cd04300 161 PWEIRRPEVSVPVRFGGRVEEVPDGgrlrVRWVDGETVLAVPYDTPIPGYGTNTVNTLRLWSAKASDEFDLEAFNEGDYI 240
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 265 EAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSRFGCRDpvrtcfetFPDKVAIQLNDTHPA 344
Cdd:cd04300 241 RAVEQKNRAENISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRFKKSHGPLSE--------FPDKVAIQLNDTHPA 312
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 345 LSIPELMRILVDVEKVDWDKAWEITKKTCAYTNHTVLPEALERWPVSMFEKLLPRHLEIIYAINQRHLDHVAALFPGDVD 424
Cdd:cd04300 313 LAIPELMRILVDEEGLSWDEAWDITTKTFAYTNHTVLPEALEKWPVELFEKLLPRHLQIIYEINRRFLDEVRAKYPGDVD 392
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 425 RLRRMSVIEEGdcKRINMAHLCVIGSHAVNGVARIHSEIVKQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLAEII 504
Cdd:cd04300 393 RIRRMSIIEEG--KQVRMAHLAIVGSHSVNGVAALHTEILKTTVLKDFYELYPEKFNNKTNGITPRRWLLQANPGLAALI 470
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 505 VERIGEGFLTDLSQLKKLLSLVDDEAFIRDVAKVKQENKLKFSAQLEKEYKVKINPASMFDVHVKRIHEYKRQLLNCLHI 584
Cdd:cd04300 471 TETIGDDWVTDLDQLKKLEPFADDPEFLEEWAAIKQANKARLAAYIKETTGVEVNPNSIFDVQVKRIHEYKRQLLNILHI 550
                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 585 ITLYNRIKKDPAKAFVPRTVMIGGKAAPGYHMAKMIIKLVTSIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLS 664
Cdd:cd04300 551 IYLYLRIKEGPPADFVPRTVIFGGKAAPGYYLAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLS 630
                       650       660       670       680       690       700       710       720
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 665 QQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRVEDVEALDQKGYNAREFYERLPELRQAVD 744
Cdd:cd04300 631 EQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAEEVEALRKNGYYPADYYENDPRLKRVLD 710
                       730       740       750       760       770       780       790       800
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 745 QISSGFFSPKDPDCFKDVVNMLM-YHDRFKVFADYEAYIQCQAQVDRLYRNSKEWTKKVIRNIACSGKFSSDRTITEYAR 823
Cdd:cd04300 711 QIISGTFSPGDPDEFRPLVDSLLnGNDEYLVLADFESYVDAQEKVDALYRDQEEWARKSILNIARSGKFSSDRTIREYAK 790

                ....*
gi 24418919 824 EIWGV 828
Cdd:cd04300 791 DIWNV 795
Phosphorylase pfam00343
Carbohydrate phosphorylase; The members of this family catalyze the formation of glucose ...
141-828 0e+00

Carbohydrate phosphorylase; The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin.


Pssm-ID: 459770  Cd Length: 713  Bit Score: 1374.72  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   141 AACFLDSMATLGLAAYGYGIRYEFGIFNQKIVNGWQVEEADDWLRYGNPWEKARPEYMLPVHFYGRVEHTPDG----VLW 216
Cdd:pfam00343  29 AACFLDSLATLGLPAYGYGIRYEYGLFKQKIVDGWQVELPDNWLRFGNPWEIRRPEVAVEVKFGGRVEEYTDGgrlrVRW 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   217 LDTQVVLAMPYDTPVPGYKNNTVNTMRLWSAKAPNDFKLKDFNVGDYIEAVLDRNLAENISRVLYPNDNFFEGKELRLKQ 296
Cdd:pfam00343 109 VPGETVLAVPYDTPIPGYGTNTVNTLRLWSAEASEEFDLDAFNAGDYIRAVEEKNRAENISKVLYPNDSTEEGKELRLKQ 188
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   297 EYFVVAATLQDIIRRFKSsrfgcrdpVRTCFETFPDKVAIQLNDTHPALSIPELMRILVDVEKVDWDKAWEITKKTCAYT 376
Cdd:pfam00343 189 QYFFVSASLQDIIRRFKK--------GGGDLDELPDKVAIQLNDTHPALAIPELMRILVDEEGLGWDEAWDITTKTFAYT 260
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   377 NHTVLPEALERWPVSMFEKLLPRHLEIIYAINQRHLDHVAALFPGDVDRLRRMSVIEEGDCKRINMAHLCVIGSHAVNGV 456
Cdd:pfam00343 261 NHTLLPEALEKWPVDLFERLLPRHLEIIYEINRRFLEEVRAKFPGDEDRLRRMSIIEEGGDKQVRMAHLAIVGSHSVNGV 340
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   457 ARIHSEIVKQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLAEIIVERIGEGFLTDLSQLKKLLSLVDDEAFIRDVA 536
Cdd:pfam00343 341 AALHTELLKETVFKDFYELYPEKFNNKTNGITPRRWLLLANPELAALITETIGDGWITDLDQLKKLEPFADDPAFLERWR 420
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   537 KVKQENKLKFSAQLEKEYKVKINPASMFDVHVKRIHEYKRQLLNCLHIITLYNRIKKDPAKAFVPRTVMIGGKAAPGYHM 616
Cdd:pfam00343 421 AIKQANKQRLAAYIKKTTGIEVDPDSIFDVQVKRIHEYKRQLLNALHIITLYNRIKENPNADIVPRTFIFGGKAAPGYYM 500
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   617 AKMIIKLVTSIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGA 696
Cdd:pfam00343 501 AKLIIKLINSVAEVVNNDPDVNDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGA 580
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   697 NVEMAEEAGEENLFIFGMRVEDVEALDQKGYNAREFYERLPELRQAVDQISSGFFSPKDPDCFKDVVNMLM-YHDRFKVF 775
Cdd:pfam00343 581 NVEIREEVGEENIFIFGLTAEEVEALRAKGYNPRDYYESNPELKRVLDQIASGTFSPGDPGLFRPLVDSLLnGGDPYLVL 660
                         650       660       670       680       690
                  ....*....|....*....|....*....|....*....|....*....|...
gi 24418919   776 ADYEAYIQCQAQVDRLYRNSKEWTKKVIRNIACSGKFSSDRTITEYAREIWGV 828
Cdd:pfam00343 661 ADFESYVDAQERVDAAYRDREEWTRMSILNIARSGKFSSDRTIREYAEDIWKV 713
P_ylase TIGR02093
glycogen/starch/alpha-glucan phosphorylases; This family consists of phosphorylases. Members ...
32-828 0e+00

glycogen/starch/alpha-glucan phosphorylases; This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. [Energy metabolism, Biosynthesis and degradation of polysaccharides]


Pssm-ID: 273967  Cd Length: 794  Bit Score: 1346.54  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919    32 FNRHLHFTLVKDRNVATPRDYFFALAHTVRDHLVGRWIRTQQHYYERDPKRIYYLSLEFYMGRTLQNTMVNLGLQTACDE 111
Cdd:TIGR02093   1 ILYHLEYTYGKTIDDATPRDLYTALAKAVRDRLVDRWLETQEKYRDNNQKQVYYLSAEFLMGRLLGNNLLNLGLYDEVKE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   112 ATYQLGLDLEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIVNGWQVEEADDWLRYGNPWE 191
Cdd:TIGR02093  81 ALRELGLDLEEILEIENDAGLGNGGLGRLAACFLDSLATLGLPATGYGIRYEYGLFKQKIVDGWQVELPDDWLRYGNPWE 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   192 KARPEYMLPVHFYGRVEHTPDG----VLWLDTQVVLAMPYDTPVPGYKNNTVNTMRLWSAKAPNDFKLKDFNVGDYIEAV 267
Cdd:TIGR02093 161 IRRPDRSYEVRFGGRVELQPDSdrlrPRWVPAETVLAIPYDVPVPGYRTDTVNTLRLWSAEAPEEFDLDAFNAGDYYEAV 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   268 LDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSsrfgcrdpVRTCFETFPDKVAIQLNDTHPALSI 347
Cdd:TIGR02093 241 EEKNRAENISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRHLE--------THPDLSDFPKKVAIQLNDTHPALAI 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   348 PELMRILVDVEKVDWDKAWEITKKTCAYTNHTVLPEALERWPVSMFEKLLPRHLEIIYAINQRHLDHVAALFPGDVDRLR 427
Cdd:TIGR02093 313 PELMRLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRRFLAELAAKGPGDEAKIR 392
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   428 RMSVIEEGDCKRINMAHLCVIGSHAVNGVARIHSEIVKQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLAEIIVER 507
Cdd:TIGR02093 393 RMSIIEEGQSKRVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYELYPEKFNNKTNGITPRRWLRLANPGLSALLTET 472
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   508 IGEGFLTDLSQLKKLLSLVDDEAFIRDVAKVKQENKLKFSAQLEKEYKVKINPASMFDVHVKRIHEYKRQLLNCLHIITL 587
Cdd:TIGR02093 473 IGDDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYL 552
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   588 YNRIKKDPAKAFVPRTVMIGGKAAPGYHMAKMIIKLVTSIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSQQI 667
Cdd:TIGR02093 553 YNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQI 632
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   668 STAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRVEDVEALDQKGYNAREFYERLPELRQAVDQIS 747
Cdd:TIGR02093 633 STAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFGLTVEEVEALREKGYNPREYYEADPELKRVLDLIS 712
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   748 SGFFSPKDPDCFKDVVNMLM-YHDRFKVFADYEAYIQCQAQVDRLYRNSKEWTKKVIRNIACSGKFSSDRTITEYAREIW 826
Cdd:TIGR02093 713 SGTFSPGDPGLFRPLYDSLLnHGDPFFVLADFAAYVDAQERVDALYRDQLEWTKKSILNIANSGKFSSDRTIREYAKEIW 792

                  ..
gi 24418919   827 GV 828
Cdd:TIGR02093 793 HV 794
GlgP COG0058
Glucan phosphorylase [Carbohydrate transport and metabolism];
24-828 0e+00

Glucan phosphorylase [Carbohydrate transport and metabolism];


Pssm-ID: 439828 [Multi-domain]  Cd Length: 795  Bit Score: 1229.62  E-value: 0e+00
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  24 DVAEVRKSFNRHLHFTLVKDRNVATPRDYFFALAHTVRDHLVGRWIRTQQHYYERDPKRIYYLSLEFYMGRTLQNTMVNL 103
Cdd:COG0058   4 NAEELFRAIDPELWETLGKRLEEAAADDWFLALAAAVRDYLSPRWFQTNRAYPDQKAKRVAYFSAEFLLGRSLGNNLLNL 83
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 104 GLQTACDEATYQLGLDLEELEEIEEDAglgngglgrlAACFLDSMATLGLAAYGYGIRYEFGIFNQKIVNGWQVEEADDW 183
Cdd:COG0058  84 GLYDEVREALAELGLDLEDLLEQEPDLplgngglgrlAADFLKSASDLGLPAVGYGLRYEYGYFRQRIDDGWQVERPDNW 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 184 LRYGNPWEKARPEYMLPVHFYGrvehtPDGvlwlDTQVVLAMPYDTPVPGYKNNTVNTMRLWSAKAPNDFKLKDFNVGDY 263
Cdd:COG0058 164 LRYGDPWELPRPEPAVEVKFGD-----EDG----RTEDVLAVPYDVPIPGYRNNTVNTLRLWKAEASEEVGLYLFDAGDY 234
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 264 IEAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSRfgcrdpvrTCFETFPDKVAIQLNDTHP 343
Cdd:COG0058 235 TDAVENKPEDRNITKVLYPGDSEEAGKELRLRQEYFLGSGGVRDLRRLHLKTG--------GDLDGLPEPVVIHLNDTHP 306
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 344 ALSIPELMRILVDVEKVDWDKAWEITKKTCAYTNHTVLPEALERWPVSMFEKLLPRHLEIIYAINQRHLDHVAALfPGDV 423
Cdd:COG0058 307 AFAILELMRLLVDEHGLSWDEAWEITRATFVFTNHTPVPEALERWPVDLFERLLPRHLEIIGEINRRFLEEVRAR-PGDR 385
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 424 DRLRRMSVIEEGdckRINMAHLCVIGSHAVNGVARIHSEIVKQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLAEI 503
Cdd:COG0058 386 ERLLRLGIIDEG---QFRMAHLALRGSHSVNGVSALHGEVLRETMFADFYPLWPVPFTNVTNGVHPRRWLLLANPELAEL 462
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 504 IVERIGEGFLTDLSQLKKLLSLVDDEAFIRDVAKVKQENKLKFSAQLEKEYKVKINPASMFDVHVKRIHEYKRQLLNCLH 583
Cdd:COG0058 463 ITEYIGDGWITDLELLEKLEPIADDPAFQEELWEVKQANKERLAAYIRERTGIVLDPDALFDGFAKRFHEYKRQLLNLLH 542
                       570       580       590       600       610       620       630       640
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 584 IITLYNRIKKDPAKAFVPRTVMIGGKAAPGYHMAKMIIKLVTSIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADL 663
Cdd:COG0058 543 DIERYNRILNNPNLDERPRQFIFAGKAAPGDEMGKLIIKLINAVARVPNNDPRVEFRLKVVFLENYDVSLAEKLVPGADV 622
                       650       660       670       680       690       700       710       720
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 664 SQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRVEDVEALDQKgYNAREFYERLPELRQAV 743
Cdd:COG0058 623 WEQIPTAGKEASGTSGMKFALNGALTLGTLDGANVEIYEEVGDENGFAFGLTAEEVEALRAK-YNPRDYYEADPELRRVL 701
                       730       740       750       760       770       780       790       800
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 744 DQISSGFFSPkDPDCFKDVVNMLMYHDRFKVFADYEAYIQCQAQVDRLYRNSKEWTKKVIRNIACSGKFSSDRTITEYAR 823
Cdd:COG0058 702 DQLASGYFSP-DPEEFRALYDLLLGGDPYLVLADFASYVDAEEEVDPLYRRPERWVRMMILNIARLGKFSSDRMIREYAE 780

                ....*
gi 24418919 824 EIWGV 828
Cdd:COG0058 781 RIWKL 785
PRK14986 PRK14986
glycogen phosphorylase; Provisional
25-833 0e+00

glycogen phosphorylase; Provisional


Pssm-ID: 184948 [Multi-domain]  Cd Length: 815  Bit Score: 924.24  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   25 VAEVRKSFNRHLHFTLVKDRNVATPRDYFFALAHTVRDHLVGRWIRTQQHYYERDPKRIYYLSLEFYMGRTLQNTMVNLG 104
Cdd:PRK14986  14 VEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSNALLSLG 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  105 LQTACDEATYQLGLDLEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIVNGWQVEEADDWL 184
Cdd:PRK14986  94 IYDDVQGALEAMGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVNGRQKESPDYWL 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  185 RYGNPWEKARPEYMLPVHFYGRVEHTPDGVLWLDTQVVLAMPYDTPVPGYKNNTVNTMRLWSAKAPNDFKLKDFNVGDYI 264
Cdd:PRK14986 174 EYGNPWEFKRHNTRYKVRFGGRIQQEGKKTRWIETEEILAVAYDQIIPGYDTDATNTLRLWSAQASSEINLGKFNQGDYF 253
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  265 EAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSsrfgcrdpVRTCFETFPDKVAIQLNDTHPA 344
Cdd:PRK14986 254 AAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILSRHYQ--------LHKTYDNLADKIAIHLNDTHPV 325
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  345 LSIPELMRILVDVEKVDWDKAWEITKKTCAYTNHTVLPEALERWPVSMFEKLLPRHLEIIYAINQRHLDHVAALFPGDVD 424
Cdd:PRK14986 326 LSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYPNDTD 405
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  425 RLRRMSVIEEGDCKRINMAHLCVIGSHAVNGVARIHSEIVKQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLAEII 504
Cdd:PRK14986 406 LLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPGRFCNVTNGVTPRRWLALANPSLSAVL 485
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  505 VERIGEGFLTDLSQLKKLLSLVDDEAFIRDVAKVKQENKLKFSAQLEKEYKVKINPASMFDVHVKRIHEYKRQLLNCLHI 584
Cdd:PRK14986 486 DEHIGRTWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHV 565
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  585 ITLYNRIKKDPAKAFVPRTVMIGGKAAPGYHMAKMIIKLVTSIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLS 664
Cdd:PRK14986 566 ITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLS 645
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  665 QQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRVEDVEALDQKGYNAREFYERLPELRQAVD 744
Cdd:PRK14986 646 EQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGNTAEEVEALRRQGYKPREYYEKDEELHQVLT 725
                        730       740       750       760       770       780       790       800
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  745 QISSGFFSPKDPDCFKDVVNMLM-YHDRFKVFADYEAYIQCQAQVDRLYRNSKEWTKKVIRNIACSGKFSSDRTITEYAR 823
Cdd:PRK14986 726 QIGSGVFSPEEPGRYRDLVDSLInFGDHYQVLADYRSYVDCQDKVDELYRNQEEWTRKAMLNIANMGYFSSDRTIKEYAD 805
                        810
                 ....*....|
gi 24418919  824 EIWGVEPSDL 833
Cdd:PRK14986 806 EIWHIDPVRL 815
PRK14985 PRK14985
maltodextrin phosphorylase; Provisional
85-826 0e+00

maltodextrin phosphorylase; Provisional


Pssm-ID: 237881 [Multi-domain]  Cd Length: 798  Bit Score: 798.49  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919   85 YLSLEFYMGRTLQNTMVNLGLQTACDEATYQLGLDLEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEF 164
Cdd:PRK14985  63 YISMEFLIGRLTGNNLLNLGWYDDVQDVLKAYDINLTDLLEEETDPALGNGGLGRLAACFLDSMATVGQPATGYGLNYQY 142
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  165 GIFNQKIVNGWQVEEADDWLRYGNPWEKARPEYMLPVHFYGRVEHTPDGVLWLDTQVVLAMPYDTPVPGYKNNTVNTMRL 244
Cdd:PRK14985 143 GLFRQSFVDGKQVEAPDDWHRDSYPWFRHNEALDVQVGIGGKVTKQDGRERWEPAFTITGEAWDLPVVGYRNGVAQPLRL 222
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  245 WSAKAPNDFKLKDFNVGDYIEAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSRfgcrdpvR 324
Cdd:PRK14985 223 WQATHAHPFDLTKFNDGDFLRAEQQGIDAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSVADILRRHHLAG-------R 295
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  325 TcFETFPDKVAIQLNDTHPALSIPELMRILVDVEKVDWDKAWEITKKTCAYTNHTVLPEALERWPVSMFEKLLPRHLEII 404
Cdd:PRK14985 296 K-LHELPDYEVIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSLLPRHMQII 374
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  405 YAINQRHLDHVAALFPGDVDRLRRMSVIEEgdcKRINMAHLCVIGSHAVNGVARIHSEIVKQSVFKDFYELEPEKFQNKT 484
Cdd:PRK14985 375 KEINTRFKTLVEKTWPGDKKVWAKLAVVHD---KQVRMANLCVVSGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVT 451
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  485 NGITPRRWLLLCNPGLAEIIVERIGEGFLTDLSQLKKLLSLVDDEAFIRDVAKVKQENKLKFSAQLEKEYKVKINPASMF 564
Cdd:PRK14985 452 NGITPRRWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIF 531
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  565 DVHVKRIHEYKRQLLNCLHIITLYNRIKKDPAKAFVPRTVMIGGKAAPGYHMAKMIIKLVTSIGDVVNHDPVVGDRLRVI 644
Cdd:PRK14985 532 DVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVV 611
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  645 FLENYRVSLAEKVIPAADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRVEDVEALDQ 724
Cdd:PRK14985 612 FLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFGHTVEQVKALLA 691
                        650       660       670       680       690       700       710       720
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919  725 KGYNAREFYERLPELRQAVDQISSGFFSPKDPDCFKdvvnmLMYH------DRFKVFADYEAYIQCQAQVDRLYRNSKEW 798
Cdd:PRK14985 692 KGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFD-----QMLHslkqggDPYLVLADFAAYVEAQKQVDALYRDQEAW 766
                        730       740
                 ....*....|....*....|....*...
gi 24418919  799 TKKVIRNIACSGKFSSDRTITEYAREIW 826
Cdd:PRK14985 767 TRAAILNTARCGMFSSDRSIRDYQARIW 794
GT35_Glycogen_Phosphorylase-like cd04299
proteins similar to glycogen phosphorylase; This family is most closely related to the ...
145-736 1.98e-23

proteins similar to glycogen phosphorylase; This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism.


Pssm-ID: 340852 [Multi-domain]  Cd Length: 776  Bit Score: 106.28  E-value: 1.98e-23
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 145 LDSMATLGLAAYGYGIRYEFGIFNQKI-VNGWQVEEADdwlrYGNPwekarpeYMLPVhfygRVEHTPDGvlwldTQVVL 223
Cdd:cd04299 115 LKSASDLGVPLVGVGLLYRHGYFRQSLdSDGWQQELYP----ELDP-------GQLPL----EPVRDANG-----EPVRV 174
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 224 AMPYDtpvpgykNNTVNtMRLWSAkapndfklkdfNVGDYIEAVLDRNLAEN------ISRVLYPNDnffegKELRLKQE 297
Cdd:cd04299 175 TVELP-------DRRVH-ARVWRA-----------QVGRVPLYLLDTDVEENseddrkITDRLYGGD-----QELRIQQE 230
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 298 yfVVAAtlqdiIRRFKSSRFGCRDPVrtcfetfpdkvAIQLNDTHPALSIPELMRILVDvEKVDWDKAWEITKKTCAYTN 377
Cdd:cd04299 231 --ILLG-----IGGIRALRALGIKPD-----------VFHLNEGHAAFLGLERIRELVA-EGLDFDEALELVRASTLFTT 291
                       250       260       270       280       290       300       310       320
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 378 HTVLPEALERWPVSMFEKLLPRHleiiyainqrhldhvaALFPG-DVDRLRRMSVIEEGDC-KRINMAHLCVIGSHAVNG 455
Cdd:cd04299 292 HTPVPAGIDRFPPDLVDRYLGGY----------------PELLGlSRDEFLALGREDPPDPgEPFNMAVLALRLSQRANG 355
                       330       340       350       360       370       380       390       400
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 456 VARIHSEiVKQSVFKDFY-ELEPEK--FQNKTNGITPRRWLllcNPGLAEIIVERIGEGF--LTDLSQLKKLLSLVDDEA 530
Cdd:cd04299 356 VSKLHGE-VSREMFSNLWpGYPPEEvpIGHVTNGVHTPTWV---SPEMRELYDRYLGREWreRPTLEDIWEAVDQIPDEE 431
                       410       420       430       440       450       460       470       480
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 531 FIRdvAKVKQENKL------KFSAQLEKEYKVKINPASMFDV---------HVKRIHEYKRQLLNCLHIITLyNRIKKDP 595
Cdd:cd04299 432 LWE--VRNTLRKRLvefvreRLREQWLRNGAGPAEIAELDNAldpnvltigFARRFATYKRATLLLRDPERL-ARILNNP 508
                       490       500       510       520       530       540       550       560
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 24418919 596 AKafvPRTVMIGGKAAPGYHMAKMIIKLVTSIGDvvnhDPVVgdRLRVIFLENYRVSLAEKVIPAADLSQQISTAGTEAS 675
Cdd:cd04299 509 ER---PVQFVFAGKAHPHDEGGKALIREIVRFSR----EPDF--RGRIIFLEDYDMQLARHLVQGVDVWLNNPRRPLEAS 579
                       570       580       590       600       610       620
                ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 24418919 676 GTGNMKFMLNGALTIGTMDGANVEMAEeagEENLFIFG-MRV-EDVEALDQKgyNAREFYERL 736
Cdd:cd04299 580 GTSGMKAALNGGLNLSVLDGWWAEGYD---GKNGWAIGdERVyPDTEAQDAA--EAAALYDLL 637
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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