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Conserved domains on  [gi|291575955|gb|ADE18629|]
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ATP synthase F0 subunit 6 (mitochondrion) [Bombyx mori]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 3.22e-92

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 269.73  E-value: 3.22e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955   1 MMTNLFSIFDPSTNlMNLPMNWISTILGLLFIPYSFWLIPNRHFIMWNFISKKLHNEFKTLLKNNyFNGSTFIFISLFFF 80
Cdd:MTH00157   1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  81 IFFNNFLGLFSYIFTSTSHLTMSLSLSMPLWLSFMLYGWIKNTNHMFIHMIPQGTPYILMPFMVIIETISNIIRPGTLAV 160
Cdd:MTH00157  79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 291575955 161 RLTANMIAGHLLMTLLSSTGTNMSFYMIIILIFIQIMLMILESAVAIIQSYVITILSTLYYSEVN 225
Cdd:MTH00157 159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 3.22e-92

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 269.73  E-value: 3.22e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955   1 MMTNLFSIFDPSTNlMNLPMNWISTILGLLFIPYSFWLIPNRHFIMWNFISKKLHNEFKTLLKNNyFNGSTFIFISLFFF 80
Cdd:MTH00157   1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  81 IFFNNFLGLFSYIFTSTSHLTMSLSLSMPLWLSFMLYGWIKNTNHMFIHMIPQGTPYILMPFMVIIETISNIIRPGTLAV 160
Cdd:MTH00157  79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 291575955 161 RLTANMIAGHLLMTLLSSTGTNMSFYMIIILIFIQIMLMILESAVAIIQSYVITILSTLYYSEVN 225
Cdd:MTH00157 159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-225 4.16e-39

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 134.64  E-value: 4.16e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955    5 LFSIFDPST-NLMNLPMNWISTILGLLFIPYSF----WLIPNRHFIMWNFISKKLHNEFKTLLKNNYFNgSTFIFISLFF 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGK-FFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955   80 FIFFNNFLGLFSYIFTSTSHLTMSLSLSMPLWLSFMLYGWIKNTNHMFIHMIPQGTPYILMPFMVIIETISNIIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 291575955  160 VRLTANMIAGHLLMTLLSSTG-TNMSFYMIIILIFIQIMLMILESAVAIIQSYVITILSTLYYSEVN 225
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLfSLMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 88-220 6.65e-36

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 124.05  E-value: 6.65e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  88 GLFSYIFTSTSHLTMSLSLSMPLWLSFMLYGWIKNTNHMFIHMIPQGTPYILMPFMVIIETISNIIRPGTLAVRLTANMI 167
Cdd:cd00310   22 GLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIRPLSLSVRLFANMF 101

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 291575955 168 AGHLLMTLLSSTGTNMSFYMIIILIFIQIMLMILESAVAIIQSYVITILSTLY 220
Cdd:cd00310  102 AGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVY 154
ATP-synt_A pfam00119
ATP synthase A chain;
92-222 7.15e-21

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 86.77  E-value: 7.15e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955   92 YIFTSTSHLTMSLSLSMPLWLSFMLYGWIKN-TNHMFIHMIPQGTPYILMPFMVIIETISNIIRPGTLAVRLTANMIAGH 170
Cdd:pfam00119  82 GGFTVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGH 161

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 291575955  171 LLMTLLSS---TGTNMSFYMIIILIFIQIMLMILESAVAIIQSYVITILSTLYYS 222
Cdd:pfam00119 162 LLLLLLAGlifALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 88-220 1.36e-14

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 69.72  E-value: 1.36e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  88 GLFSYIFTSTSHLTMSLSLSMPLWLSFMLYG-WIKNTNHMFIHMIPQGTPYiLMPFMVIIETISNIIRPGTLAVRLTANM 166
Cdd:COG0356   75 GLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFPW-LAPLMLPIEIISELARPLSLSLRLFGNM 153

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 291575955 167 IAGHLLMTLLSSTGTnmSFYMIIILIFIQIMLMILESAVAIIQSYVITILSTLY 220
Cdd:COG0356  154 FAGHIILLLLAGLAP--FLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-225 3.22e-92

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 269.73  E-value: 3.22e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955   1 MMTNLFSIFDPSTNlMNLPMNWISTILGLLFIPYSFWLIPNRHFIMWNFISKKLHNEFKTLLKNNyFNGSTFIFISLFFF 80
Cdd:MTH00157   1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  81 IFFNNFLGLFSYIFTSTSHLTMSLSLSMPLWLSFMLYGWIKNTNHMFIHMIPQGTPYILMPFMVIIETISNIIRPGTLAV 160
Cdd:MTH00157  79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 291575955 161 RLTANMIAGHLLMTLLSSTGTNMSFYMIIILIFIQIMLMILESAVAIIQSYVITILSTLYYSEVN 225
Cdd:MTH00157 159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILILIQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-224 1.22e-43

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 146.33  E-value: 1.22e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955   1 MMTNLFSIFDP--STNLMNLPMNWISTILGLLFIPYSFWLIPNRHFIMWNfISKKLHNEFKTLLKNNYFNGSTFIFISLF 78
Cdd:MTH00176   1 MLVDLFSSFDPpnKNIFSMISLSWITLLLFLLLMPSSVWFCPSKLQVFML-MFSTFLPEMILRSNGSYILGSASIIISLF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  79 FFIFFNNFLGLFSYIFTSTSHLTMSLSLSMPLWLSFMLYGWIKNTNHMFIHMIPQGTPYILMPFMVIIETISNIIRPGTL 158
Cdd:MTH00176  80 ILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTL 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 291575955 159 AVRLTANMIAGHLLMTLLSSTG---TNMSFYMIIILIFIQIMLMILESAVAIIQSYVITILSTLYYSEV 224
Cdd:MTH00176 160 AVRLAANLSAGHLLLGLLGAAMwglLPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEH 228
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-225 4.16e-39

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 134.64  E-value: 4.16e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955    5 LFSIFDPST-NLMNLPMNWISTILGLLFIPYSF----WLIPNRHFIMWNFISKKLHNEFKTLLKNNYFNgSTFIFISLFF 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFLISSslsrWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGK-FFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955   80 FIFFNNFLGLFSYIFTSTSHLTMSLSLSMPLWLSFMLYGWIKNTNHMFIHMIPQGTPYILMPFMVIIETISNIIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 291575955  160 VRLTANMIAGHLLMTLLSSTG-TNMSFYMIIILIFIQIMLMILESAVAIIQSYVITILSTLYYSEVN 225
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLfSLMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 88-220 6.65e-36

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 124.05  E-value: 6.65e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  88 GLFSYIFTSTSHLTMSLSLSMPLWLSFMLYGWIKNTNHMFIHMIPQGTPYILMPFMVIIETISNIIRPGTLAVRLTANMI 167
Cdd:cd00310   22 GLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIELISELIRPLSLSVRLFANMF 101

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 291575955 168 AGHLLMTLLSSTGTNMSFYMIIILIFIQIMLMILESAVAIIQSYVITILSTLY 220
Cdd:cd00310  102 AGHLLLALLSGLVPSLLSSVGLLPLLLPVALTLLELFVAFIQAYVFTLLTAVY 154
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-223 5.17e-34

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 121.21  E-value: 5.17e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955   1 MMTNLFSIFDpSTNLMNLPMNWIS-TILGLLFIPYSFWLIPNRHFIMWNFISKKLHNEFKTLLKNNYFNGStFIFISLFF 79
Cdd:MTH00179   1 MMLSMFDQFE-SPSLLGIPLLALAlLLPWLLFPSLTNRWLNNRLSTLQSWFFGSFTFQLMQPINKKGHKWA-VLFLSLML 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  80 FIFFNNFLGLFSYIFTSTSHLTMSLSLSMPLWLSFMLYGWIKNTNHMFIHMIPQGTPYILMPFMVIIETISNIIRPGTLA 159
Cdd:MTH00179  79 FLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALG 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 291575955 160 VRLTANMIAGHLLMTLLSSTGTNMSFYMIIILIFIQI---MLMILESAVAIIQSYVITILSTLYYSE 223
Cdd:MTH00179 159 VRLTANITAGHLLMHLISSAVFVLMNFMGMVALLTLLvlfLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-223 3.82e-31

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 114.19  E-value: 3.82e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955   1 MMTNLFSIFDPSTNLMNLP--MNWISTILGLLFIPYSFWLIPNRhFIMWNFISKKLHNEFKTLLKNNYFNGSTFIFISLF 78
Cdd:MTH00173   1 MMVDLFSSFDDHNSSFSSLsfLMWLLSLMSLFFFSSSVWVSSSN-LSSVFKLFVLTVSSQVTRSSGLNLGGFSLLLSSLF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  79 FFIFFNNFLGLFSYIFTSTSHLTMSLSLSMPLWLSFMLYGWIKNTNHMFIHMIPQGTPYILMPFMVIIETISNIIRPGTL 158
Cdd:MTH00173  80 LFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTL 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 291575955 159 AVRLTANMIAGHLLMTLLSSTGTNMSFYMIIILIFIQIMLM----ILESAVAIIQSYVITILSTLYYSE 223
Cdd:MTH00173 160 TVRLLANISAGHIVLTLIGNYLSSSLFSSSVVSLLLVLLIQvgyfIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-223 1.05e-30

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 112.61  E-value: 1.05e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955   1 MMTNLFSIFDpSTNLMNLPMNWISTILGLLFIPY-SFWLIPNRHFIMWNFISKKLHNEFKTLLKNNYFNGStFIFISLFF 79
Cdd:MTH00120   1 MNLNFFDQFS-SPELLGIPLILLAMLIPALLIPSpKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWA-LILTSLML 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  80 FIFFNNFLGLFSYIFTSTSHLTMSLSLSMPLWLSFMLYGWIKNTNHMFIHMIPQGTPYILMPFMVIIETISNIIRPGTLA 159
Cdd:MTH00120  79 LLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALG 158

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 291575955 160 VRLTANMIAGHLLMTLLSSTG---TNMSFYMIIILIFIQIMLMILESAVAIIQSYVITILSTLYYSE 223
Cdd:MTH00120 159 VRLTANLTAGHLLIQLISTATlnlLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-223 1.32e-30

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 112.76  E-value: 1.32e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955   3 TNLFSIFDPSTnLMNLPMNWISTILGLLFIPYSF---WLIPNRHFIMWNFISKKLHNEFKTLLKNNyfNGSTFIFISLFF 79
Cdd:MTH00035   5 NSIFGQFSPDT-ILFIPLTLLSSVIALSWLFFINptnWLPSRSQSIWLTFRQEILKLIFQNTNPNT--APWAGLLTTVFI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  80 FIFFNNFLGLFSYIFTSTSHLTMSLSLSMPLWLSFMLYGWIKNTNHMFIHMIPQGTPYILMPFMVIIETISNIIRPGTLA 159
Cdd:MTH00035  82 LILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALG 161

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 291575955 160 VRLTANMIAGHLLMTLLSSTGTNM--SFYMIIILIFIQIMLMILESAVAIIQSYVITILSTLYYSE 223
Cdd:MTH00035 162 LRLAANLTAGHLLIFLLSTAIWELsnSPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-220 1.78e-30

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 112.13  E-value: 1.78e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955   1 MMTNLFSIFDPSTN-LMNLPMN---WISTILGLLFIPYSFWLIPNRHFIMWNFISKKLHNEFKTLLKNNyFNGSTFIFIS 76
Cdd:MTH00005   1 MLTDIFSSFDPATNsLFNNLSStafWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKH-LKGFSSLISA 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  77 LFFFIFFNNFLGLFSYIFTSTSHLTMSLSLSMPLWLSFMLYGWIKNTNHMFIHMIPQGTPYILMPFMVIIETISNIIRPG 156
Cdd:MTH00005  80 LFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPI 159

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 291575955 157 TLAVRLTANMIAGHLLMTLLSSTGTNMSFYMIIILIFIQIM---LMILESAVAIIQSYVITILSTLY 220
Cdd:MTH00005 160 TLSFRLAANMSAGHIVLSLIGIYAASALFSSISSTILLILTqmgYILFEVGICLIQAYIFCLLLSLY 226
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 88-223 8.92e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 107.65  E-value: 8.92e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  88 GLFSYIFTSTSHLTMSLSLSMPLWLSFMLYGWIKNTNHMFIHMIPQGTPYILMPFMVIIETISNIIRPGTLAVRLTANMI 167
Cdd:MTH00132  87 GLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLALGVRLTANLT 166

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 291575955 168 AGHLLMTLLSSTGTNMSFYMIIILIFIQIMLM---ILESAVAIIQSYVITILSTLYYSE 223
Cdd:MTH00132 167 AGHLLIQLIATAAFVLLPLMPTVAILTATLLFlltLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 1-220 7.99e-28

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 105.42  E-value: 7.99e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955   1 MMTNLFSIFDPSTnLMNLPMNWISTILGLLFIPYSFWLIPNRHFIM--W--NFISKKLhnefkTLLKNNYFNGSTFIFIS 76
Cdd:MTH00101   1 MNENLFASFITPT-ILGLPIVTLIIMFPSLLFPTPNRLINNRLISIqqWliQLTSKQM-----MTIHNTKGQTWSLMLMS 74

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  77 LFFFIFFNNFLGLFSYIFTSTSHLTMSLSLSMPLWLSFMLYGWIKNTNHMFIHMIPQGTPYILMPFMVIIETISNIIRPG 156
Cdd:MTH00101  75 LILFIGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPM 154

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 291575955 157 TLAVRLTANMIAGHLLMTLLSSTG---TNMSFYMIIILIFIQIMLMILESAVAIIQSYVITILSTLY 220
Cdd:MTH00101 155 ALAVRLTANITAGHLLIHLIGGATlalMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 88-223 8.79e-26

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 100.04  E-value: 8.79e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  88 GLFSYIFTSTSHLTMSLSLSMPLWLSFMLYGWIKNTNHMFIHMIPQGTPYILMPFMVIIETISNIIRPGTLAVRLTANMI 167
Cdd:MTH00073  87 GLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLALGVRLTANLT 166

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 291575955 168 AGHLLMTLLSSTG---TNMSFYMIIILIFIQIMLMILESAVAIIQSYVITILSTLYYSE 223
Cdd:MTH00073 167 AGHLLIQLISTATlvlLPLMPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 20-220 8.62e-22

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 89.33  E-value: 8.62e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  20 MNWISTILGLLFIPYSFwLIPNRhfimWNFISKKLHNEFKTLLKNNYFNGST---FIFISLFFFIFFNNFLGLFSYIFTS 96
Cdd:MTH00172  23 MMILVIIVVLLLFKGIK-LIPKR----WQSIIEIIYNHFHGVVKDNLGNEGLkyfPFIISLFFFIVFLNLLGLFPYVFTP 97

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  97 TSHLTMSLSLSMPLWLSFMLYGWIKNTNHMFIHMIPQGTPYILMPFMVIIETISNIIRPGTLAVRLTANMIAGHLLMTLL 176
Cdd:MTH00172  98 TTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFAIL 177

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 291575955 177 SSTGTNM---SFYMIIILIFIQIMLMILESAVAIIQSYVITILSTLY 220
Cdd:MTH00172 178 AGFGFNMlcaSGFLSLFPLLIMVFITLLEIAVAVIQAYVFCLLTTIY 224
ATP-synt_A pfam00119
ATP synthase A chain;
92-222 7.15e-21

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 86.77  E-value: 7.15e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955   92 YIFTSTSHLTMSLSLSMPLWLSFMLYGWIKN-TNHMFIHMIPQGTPYILMPFMVIIETISNIIRPGTLAVRLTANMIAGH 170
Cdd:pfam00119  82 GGFTVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGH 161

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 291575955  171 LLMTLLSS---TGTNMSFYMIIILIFIQIMLMILESAVAIIQSYVITILSTLYYS 222
Cdd:pfam00119 162 LLLLLLAGlifALLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 16-223 9.64e-21

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 86.98  E-value: 9.64e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  16 MNLPMNWISTILGLLFIpySFWLIPNRhfimWNFISKKLHNEFKTLLKNNY-FNGSTFI--FISLFFFIFFNNFLGLFSY 92
Cdd:MTH00175  31 SSMMMVLAVIIFWLLLK--GDKLIPNR----WQSIMELIYLNIRSVVHDNLgKSGQKYFpfILSLFLFIAILNILGLFPY 104

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  93 IFTSTSHLTMSLSLSMPLWLSFMLYGWIKNTNHMFIHMIPQGTPYILMPFMVIIETISNIIRPGTLAVRLTANMIAGHLL 172
Cdd:MTH00175 105 VFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAGHLL 184

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 291575955 173 MTLLSSTGTNMSFYMIIILIFIQIMLMI----LESAVAIIQSYVITILSTLYYSE 223
Cdd:MTH00175 185 FAILSGFAFNMLSNGLIILSLFPMLIMIfitlLEMAVAVIQAYVFCLLTTIYLGD 239
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 88-220 1.36e-14

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 69.72  E-value: 1.36e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  88 GLFSYIFTSTSHLTMSLSLSMPLWLSFMLYG-WIKNTNHMFIHMIPQGTPYiLMPFMVIIETISNIIRPGTLAVRLTANM 166
Cdd:COG0356   75 GLIPGLFPPTADINVTLALALIVFVLVHYYGiKKKGLGGYLKHLFFPPFPW-LAPLMLPIEIISELARPLSLSLRLFGNM 153

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 291575955 167 IAGHLLMTLLSSTGTnmSFYMIIILIFIQIMLMILESAVAIIQSYVITILSTLY 220
Cdd:COG0356  154 FAGHIILLLLAGLAP--FLLLGVLSLLLPVAWTAFELLVGFLQAYIFTMLTAVY 205
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 38-220 1.03e-13

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 68.04  E-value: 1.03e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  38 LIPNRHFIMWNFIskklHNEFKTLLKNNYFNGSTFIFISLFFFIFFNNF---LGLFSYIFTSTSHLTMSLSLSMPLWLSF 114
Cdd:MTH00174  59 LVPNRILVGLELI----YSHFYTVLKDNLGNKGGNYLAFVLSLFILILFgngLGLFPYVFTPTVHMVITLGLSFAIIVGT 134

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955 115 MLYGWIKNTNHMFIHMIPQGTPYILMPFMVIIETISNIIRPGTLAVRLTANMIAGHLLMTLLSSTGTNM----SFYMIII 190
Cdd:MTH00174 135 TLAGLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIASFAWKMintgILIGSFV 214

                        170       180       190
                 ....*....|....*....|....*....|
gi 291575955 191 LIFIQIMLMILESAVAIIQSYVITILSTLY 220
Cdd:MTH00174 215 PFAILIFVTILEMAVAIIQAYVFTLLTIVY 244
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 89-223 6.80e-13

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 65.20  E-value: 6.80e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  89 LFSYIFTSTSHLTMSLSLSMPLWLSFMLYG-WIKNTNHMFIHMIPQgtpyiLMPFMVIIETISNIIRPGTLAVRLTANMI 167
Cdd:PRK05815  92 IPYLLFPPTADINVTLALALIVFVLVIYYGiKKKGLGGYLKEFYLQ-----PHPLLLPIEIISEFSRPISLSLRLFGNML 166

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 291575955 168 AGHLLMTLLSSTGtNMSFYMIIILIFIQIMLMILESAVAIIQSYVITILSTLYYSE 223
Cdd:PRK05815 167 AGELILALIALLG-GAGLLLALAPLILPVAWTIFEIFVGTLQAYIFMMLTIVYISM 221
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 88-223 2.70e-06

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 46.12  E-value: 2.70e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  88 GLFSYIFTSTSHLTMSLSLSMPLWLSFMLYGWIKNTnhMFIHMIPQGTPYILMPF-MVIIETISNIIRPGTLAVRLTANM 166
Cdd:MTH00087  69 GLFPYSFSPCGMVEFTFLYALVAWLSTFLSFLSKSE--KFSVYLSKGSDSFLKTFsMLFVEIVSELSRPLALTLRLTVNL 146

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 291575955 167 IAGHLLMTLLSSTGTNMSFymiiilifIQIMLMILESAVAIIQSYVITILSTLYYSE 223
Cdd:MTH00087 147 MVGHLISSLLNFLGEKYVW--------LSILAIMMECFVAFIQSYIFSRLIYLYLNE 195
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 95-220 1.55e-05

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 44.88  E-value: 1.55e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  95 TSTSHLTMSLSLSMPLWLSFMLYGWIKNTNHMFIHMIPQGTPYILMPFMVIIETI-SNIIRPGTLAVRLTANMIAGH-LL 172
Cdd:PRK13417 217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHvII 296

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 291575955 173 MTLLSSTGTNMSFYMIIILIFIQIMLMILESAVAIIQSYVITILSTLY 220
Cdd:PRK13417 297 LALMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 134-220 2.32e-05

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 44.35  E-value: 2.32e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955 134 GTPYILMPFMVIIETISNIIRPGTLAVRLTANMIAGHLLMTLLSSTGTNMSFYMIIILIFIQIMLMI--LESAVAIIQSY 211
Cdd:PRK13419 234 GTHWSLWIIMIPIEFIGLFTKPFALTVRLFANMTAGHIVILSLIFISFILKSYIVAVAVSVPFAIFIylLELFVAFLQAY 313


                 ....*....
gi 291575955 212 VITILSTLY 220
Cdd:PRK13419 314 IFTMLSALF 322
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 90-169 5.81e-04

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 39.10  E-value: 5.81e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 291575955  90 FSYIFTSTSHLTMSLSLSMPLWLSFMLYGWIKNTNHMFIHMIPQGTPYILMPFMVIIETISNIIRPGTLAVRLTANMIAG 169
Cdd:MTH00050  42 LPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFVCIAETISYIIRPVVLILRPFINISLG 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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